Genetic Dissection of the Drosophila melanogaster Female Head Transcriptome Reveals Widespread Allelic Heterogeneity

Modern genetic mapping is plagued by the “missing heritability” problem, which refers to the discordance between the estimated heritabilities of quantitative traits and the variance accounted for by mapped causative variants. One major potential explanation for the missing heritability is allelic heterogeneity, in which there are multiple causative variants at each causative gene with only a fraction having been identified. The majority of genome-wide association studies (GWAS) implicitly assume that a single SNP can explain all the variance for a causative locus. However, if allelic heterogeneity is prevalent, a substantial amount of genetic variance will remain unexplained. In this paper, we take a haplotype-based mapping approach and quantify the number of alleles segregating at each locus using a large set of 7922 eQTL contributing to regulatory variation in the Drosophila melanogaster female head. Not only does this study provide a comprehensive eQTL map for a major community genetic resource, the Drosophila Synthetic Population Resource, but it also provides a direct test of the allelic heterogeneity hypothesis. We find that 95% of cis-eQTLs and 78% of trans-eQTLs are due to multiple alleles, demonstrating that allelic heterogeneity is widespread in Drosophila eQTL. Allelic heterogeneity likely contributes significantly to the missing heritability problem common in GWAS studies.     

Abdominal-B Neurons Control Drosophila Virgin Female Receptivity

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Control of Male Reproductive Behavior by the Central Nervous System of Drosophila: Dissection of a Courtship Pathway by Genetic Mosaics

In gynandromorphs of Drosophila, a detailed examination was made of the association between male courtship behavior and the chromosomal genotype of various parts of the central nervous system. Mosaic flies that behave as males repeatedly show a shorter courtship than normal males. If there is to be male behavior, the posterior dorsal brain must be haplo-X on at least one side for occurrence of the early courtship events. Tapping, following of females and wing extension. Licking (proboscis extension) has nearly the same focus but is submissive; that is, male tissue must be present in both left and right dorsal brain. The next courtship step, attempted copulation, has a focus (especially for actual genital contact) located in the thoracic ganglia, though apparently not in a discrete region. Attempted copulation, which can occur even in mosaics with a gravid abdomen, may be correlated with the presence of sex combs. The role of courtship foci are interpreted in terms of known sensory inputs to and functions of the major insect ganglia.     

Dissection of DNA Damage Responses Using Multiconditional Genetic Interaction Maps

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Highlights? A resource of genetic modules and networks induced by distinct types of DNA damage ? Networks distinguish DNA damage response pathways with high statistical power ? Rtt109, a histone acetyltransferase, affects the mutagenic bypass of DNA lesions ? The neddylation machinery and Irc21 affect cell-cycle control and genome stability     

Genetic Control of Development of Malpighian Tubules in Drosophila melanogaster

Malpighian tubules of insects are a functional analog of mammalian kidneys and serve as a classical model for studying the structure and functions of transport epithelium. The review contains the data on structural organization, functioning, and formation of the Malpighian tubules during embryogenesis in Drosophila melanogaster. Various systems of genes are described that control the program of development of the renal (Malpighian) tubules in D. melanogaster. A special attention is paid to the ways of signal transduction and factors involved in cell differentiation, proliferation, and morphological transformation during development of the Malpighian tubules. Evolutionarily conservative genetic systems are considered that are involved in the control of development of both the renal epithelium ofDrosophila and mammalian kidneys. A relationship was noted between the disturbed balance of genetic material and congenital defects of the human excretory system.     

Genetic Screening for Meiotic Mutations of the Female Germline Mosaic Clones in Drosophila melanogaster

A method of screening for meiotic mutations based on genetic analysis of chromosome disjunction in germline mosaic clones of females homozygous for potential mutations is proposed. The clones are obtained at high frequency due to the use of the transgenic FLP/FRT system of mitotic recombination. This system permits obtaining homozygous clones in the first generation after mutagenesis, whereas the cultures are set up after selection for potential meiotic mutations. This significantly enhances, the efficiency of screening by the elimination of the limiting stage. Using this method, the following mutations were revealed in the 3L arm of Drosophila: ff6leading to disturbed centriole disjunction, which results in appearance of multi-tail spermatids and three-pole spindles during male meiosis; ff3leading to the formation of chromosome bridges in anaphase and telophase, chromosome nondisjunction, and premature chromatin condensation after metaphase; embryonic lethal ff29, with disturbed coordination between nuclear and centrosome cycles during syncytial cleavage; and a series of other mutations causing a wide spectrum of disturbances in male meiosis. Comparison of the proposed method with procedures of screening for yeast cell-cycle mutations showed that we succeeded in attaining the efficiency of screening in the Drosophilamodel close to that in the yeast model.     

雌激素的非基因组途径在哺乳动物雌性生殖过程中的作用机制

雌激素的非基因组调节模式在雌性生殖系统中广泛存在．雌激素通过基因组、非基因组及两种调节模式的整合在不同组织中行使多种生理功能．卵巢中雌激素能通过非基因组效应对卵细胞起到保护作用．子宫中雌激素对多种基因的表达都是通过非基因组模式．对雌激素非基因组效应的研究将有利于进一步了解雌激素的作用机制．     

Segmental Polarity in Drosophila Melanogaster: Genetic Dissection of Fused in a Suppressor of Fused Background Reveals Interaction with Costal-2

fused (fu) is a segment polarity gene that encodes a putative serine/threonine kinase. A complete suppressor of the embryonic and adult phenotypes of fu mutants, Suppressor of fused (Su(fu)), was previously described. The amorphic Su(fu) mutation is viable and displays no phenotype by itself. We have used this suppressor as a tool to perform a genetic dissection of the fu gene. Analysis of the interaction between Su(fu) and 33 fu alleles shows that they belong to three different classes. Defects due to class I fu alleles are fully suppressed by Su(fu). Class II fu alleles lead to a new segment polarity phenotype in interaction with Su(fu). This phenotype corresponds to embryonic and adult anomalies similar to those displayed by the segment polarity mutant costal-2 (cos-2). Class II alleles are recessive to class I alleles in a fu[I]/fu[II];Su(fu)/Su(fu) combination. Class 0 alleles, like class I alleles, confer a normal segmentation phenotype in interaction with Su(fu). However class II alleles are dominant over class 0 alleles in a fu[0]/fu[II];Su(fu)/Su(fu) combination. Alleles of class I and II correspond to small molecular events, which may leave part of the Fu protein intact. On the contrary, class 0 alleles correspond to large deletions. Several class I and class II fu mutations have been mapped, and three mutant alleles were sequenced. These data suggest that class I mutations affect the catalytic domain of the putative Fu kinase and leave the carboxy terminal domain intact, whereas predicted class II proteins have an abnormal carboxy terminal domain. Su(fu) enhances the cos-2 phenotype and cos-2 mutations interact with fu in a way similar to Su(fu). All together these results suggest that a close relationship might exist between fu, Su(fu) and cos-2 throughout development. We thus propose a model where the Fu(+) kinase is a posterior inhibitor of Costal-2(+) while Su(fu)(+) is an activator of Costal-2(+). The expression pattern of wingless and engrailed in fu and fu;Su(fu) embryos is in accordance with this interpretation.     

Drosophila-Host Genetic Control of Susceptibility to Drosophila C Virus

Interactions between Drosophila C virus (DCV) and its natural host, Drosophila melanogaster, were investigated using 15 geographical population samples infected by intraabdominal inoculation. These strains derived from natural populations of D. melanogaster differed in susceptibility to the DCV(C). One strain was ``partially tolerant'. Isofemale lines obtained from one susceptible and one partially tolerant strain were studied. The partially tolerant phenotype was dominant, and there was no difference between F(1) progeny of direct and reciprocal crosses. Analysis of F(2) progeny showed that neither sex-linked genes nor maternal effects are involved in susceptibility to DCV(C). The partially tolerant strain phenotype was dominant and segregated with chromosome III. Two nonexclusive hypotheses are proposed to explain chromosome III gene action.     

雌性动物生殖系统中的一氧化氮

一氧化氮(nitric oxide,NO)属于无机自由基气体,作为一种特殊的生物传递信号分子,日益受到生命科学各领域的普遍重视。机体内的NO是由三种一氧化氮合酶(nitric oxide synthase,NOS)合成的。NOS在体内的分布极为广泛,几乎遍布机体的每一个系统。研究表明,生殖系统中的NO参与了卵泡的发育和成熟、胚胎的植入、妊娠的维持、分娩等许多生理过程。现就NO在雌性生殖系统中的作用进行阐述。     

Genetic Dissection of Histone Function

Mutational analysis is an essential tool for understanding the functions of genes within a living organism. The budding yeastSaccharomyces cerevisiaeprovides an excellent model system for dissecting the genetics of histone function at the molecular and cellular levels. A simple gene organization, plus a wide variety of genetic strategies, makes it possible to directly manipulate a specific histone genein vitroand then examine the expression of mutant allelesin vivo.Recent methods for manipulating the yeast histone genes have been designed to facilitate both site-directed analysis of structure/function relationships and unbiased screens targeted at specific functional pathways. The conservation of histone and nucleosome structure throughout evolution means that the principles discovered through genetic studies in yeast will be broadly applicable to the chromatin of more complex eukaryotes.     

心脏发育的基因调控

心脏发育是一个复杂的过程.在脊椎动物和无脊椎动物果蝇中驱动早期心脏分化的基因具有惊人的相似性.以果蝇、斑马鱼、小鼠等作为模式动物,以心脏的发育过程为主线,探讨了心脏发育的基因调控的研究进展.     

Genetic Control of the Formation and Reorganization of Chromocenter in Drosophila

The chromocenter integrates the entire Drosophilagenome into a unit. The formation and reorganization of chromocenter are genetically determined. Currently, several mutations affecting the structure of chromocenter have been described. In this work, I present evidence on the time of the formation and reorganization of chromocenter in mitotic and meiotic cells of females of the wild type and the ff16mutant line obtained by selection of mosaic clones produced from mitotic recombination of chromosomes in the dividing embryo cells. In females homozygous for this mutation, the second stage of the formation of chromocenter (joining two groups of nonhomologous chromosomes X-4 and 2-3 into a united ring structure =X=2=3=4=) is disturbed. The differences between the mitotic and meiotic reorganization of chromocenter and the role of chromocenter in the control of chromosome segregation are discussed.