Isolation and characterization of microsatellite loci in the beaver (Castor canadensis)

We have isolated and characterized 10 microsatellite loci in the beaver (Castor canadensis). Sixty individuals from southern and central Illinois were screened at each locus. All loci exhibited moderate levels of polymorphism, ranging from five to 13 alleles per locus with average heterozygosity ranging from 0.317 to 0.867. Locus Cca5 deviated significantly from HWE (P < 0.001). The locus pair Cca4/Cca5 was shown to be in linkage disequilibrium in southern Illinois, but not in the central Illinois population. The remaining eight loci will be useful in investigations of mating and kinship patterns in beaver populations in Illinois.     

Beavers (Castor canadensis) facilitate early access by Canada geese (Branta canadensis) to nesting habitat and areas of open water in Canada's boreal wetlands

Several studies demonstrate how beavers influence waterfowl habitat availability, ultimately improving waterfowl breeding success; however, no current research links beavers to early season nesting activities of Canada geese (Branta canadensis) in northern climates. We examined how beavers facilitate early access to open water for geese at Miquelon Lake Provincial Park (MLPP), Canada. We surveyed 32 active and 39 inactive beaver ponds to examine whether beavers facilitate early access to open water. Open water occurred 10.7 days earlier at active beaver ponds (mean ice-off day = 87.54, s = 13.88) than inactive ponds (mean ice-off day = 98.19, s = 9.07), especially adjacent to main lodge entrances and winter food caches. Snowpack was on average 5.9 cm shallower at active ponds. Prior to availability of open water, Canada geese exhibited intraspecific territoriality over beaver lodges as nest sites and once water was present, preferred island lodges over bank lodges. These findings support other studies that examined island nesting as protection from terrestrial predators and highlight the importance of beavers in creating open water areas earlier in the season.     

Habitat and diet of young grouse broods: resource partitioning between Capercaillie (Tetrao urogallus) and Black Grouse (Tetrao tetrix) in boreal forests

We compared habitat use and diets of young Capercaillie and Black Grouse broods in a boreal forest in southeast Norway. We used pointing dogs to search for broods (N = 83) in mature “natural” forest types and examined the crop content of 66 chicks 1–9 weeks old. We also measured the abundance of insects in the habitats where broods were found. Although overlapping substantially in both habitat and diets, there were notable differences: Capercaillie broods were more frequently recorded in bilberry-dominated forest types, whereas Black Grouse preferentially used pine bog forest, a more open habitat with little bilberry. Capercaillie chicks ate proportionally more insects, particularly lepidopteran larvae, and insects dominated their diet for a longer period of time (until age 28–29 days) than in Black Grouse (14–15 days). After reaching their peaks, the quantity of insects in the crops declined rapidly especially in Capercaillie, and in one of 2 years this occurred at a time when insects, including larvae, were still abundant in the habitats. Among plant foods, both species ate large amounts of Bilberry (Vaccinium myrtillus) and Bog Whortleberry (V. uliginosum). The main difference between species was a large proportion of both over-wintered and new, not yet ripe, berries of Cranberry (Oxycoccus quadripetalus) in Black Grouse, and a higher proportion of the forb Melampyrum sylvaticum in Capercaillie. The difference in diets reflected their differential use of habitats; the Vaccinium-preferred habitats of Capercaillie were richer in insects, particularly larvae, than the pine bog habitat preferred by Black Grouse. Because insects, especially larvae, comprised a larger proportion of the diet of Capercaillie chicks and chicks of this species need more food to sustain their rapid growth, Capercaillie is likely to be more sensitive to variation in insect food than Black Grouse. Also, by reducing the abundance of bilberry, the main host plant of larvae chick food, clearcutting forestry has negative effects on the brood habitat quality of both species.     

Vegetation analysis and tree population structure of tropical wet evergreen forests in and around Namdapha National Park,northeast India

Species composition, diversity and tree population structure were studied in three stands of the tropical wet evergreen forest in and around Namdapha National Park, Arunachal Pradesh, India. Three study stands exposed to different intensities of disturbances were identified, viz., undisturbed (2.4 ha) in the core zone of the park, moderately disturbed (2.1 ha) in the periphery of the park and highly disturbed (2.7 ha) outside the park area. In total 200 plant species belonging to 73 families were recorded in three stands. Tree density and basal area showed a declining trend with the increase in disturbance intensity. The densities of tree saplings and seedlings were lower in the disturbed stands than in the undisturbed stand. Species like Altingia excelsa, Olea dioica, Terminalia chebula, Mesua ferrea and Shorea assamica in the undisturbed stand and Albizia procera alone in the moderately disturbed stand contributed more than 50% of the total tree density in respective stands. The undisturbed stand contained young tree population. In the highly disturbed stand, the tree density was scarce, but had uncut trees of higher girth class (>210 cm GBH). Low shrub density was recorded in both disturbed stands due to frequent human disturbances; the broken canopy and direct sunlight enhanced the abundance of herbs in these stands. With a species rarity (species having <2 individuals) of ca. 50%, the tropical wet evergreenforests of the Namdapha National Park and its adjacent areas warrant more protection from human intervention and also eco-development to meet the livelihood requirements of the local inhabitants in the peripheral areas of the Namdapha National Park in order to reduce the anthropogenic pressure on the natural resources of the park.     

Canopy gaps and establishment patterns of spruce (Picea abies (L.) Karst.) in two old-growth coniferous forests in central Sweden

The spatial pattern of seedlings, saplings and canopy trees was studied in two spruce (Picea abies (L.) Karst.) forests in central Sweden. Canopy and forest structure were determined in five 0.25 ha plots. Life stage classes were distinguished on the basis of age and size distributions. Ripley's K-function (1977) was used to analyze the spatial patterns within each class. A random distribution of seedlings gave way to a more aggregated pattern on a small scale during the establishment phase. Saplings and sub-canopy trees were strongly aggregated and canopy trees were again randomly distributed within the plots. The proportion of individuals growing in gaps was used as an index of association between the spatial pattern in saplings and sub-canopy trees and the occurrence of small (50–350 m²) canopy gaps. Under the null hypothesis of independence the expected value of this statistic would equal the canopy gap ratio for the stand. Monte Carlo simulation of this statistic, using fixed sapling positions and randomly repositioned canopy gaps, confirmed the importance of canopy gaps for the final success of establishment of spruce. The association of understorey trees with gaps suggest that small gaps are typically closed by recruitment of new saplings from a sapling bank rather than by the release of larger suppressed trees.     

Microarthropod community structures (Oribatei and Collembola) in Tam Dao National Park, Vietnam

A study on the microarthropod community with special reference to species diversity of Oribatid and Collembola communities (Microarthropoda: Oribatei and Collembola) in Tam Dao National Park of Vietnam, a subtropical evergreen broad leaf alpine forest, was undertaken with the aim to explain how they are related to forest decline, and whether they can be used as bioindicators of forest plant succession. The results have shown that microarthropod community structures, particularly species diversity of oribatid and collembolan communities, are related to forest decline. Therefore they can be used as bioindicators of forest plant succession. In Tam Dao National Park, there was an inverse relation between species diversity of the oribatid and collembola communities. The species diversity of the oribatid community gradually decreased with forest decline whereas the species diversity of the collembola community gradually increased.     

The relative contribution of environmental and genetic factors to phenotypic variation in familial Mediterranean fever (FMF)

Introduction

Familial Mediterranean fever (FMF) is an autosomal recessive disease, caused by mutations in the FMF gene MEFV (MEditerranean FeVer). It has a large phenotypic diversity even in patients with similar genotypes. Despite evidence that environmental factors (EFs) and genetic factors, including MEFV mutations (such as M694V, E148Q) and background modifier genes (MGs), affect the clinical manifestations of FMF, the relative contribution of each remains unknown.

Methods

To investigate the relative contribution of environmental and genetic factors to the phenotype of FMF, we compared the intra-pair clinical concordance of 10 mono and 7 dizygotic twins with FMF. The part played by EFs was determined by the phenotypic discordance of the monozygous twins, and the MGs effect was determined by deducing the environmental effect, computed for MZ twins, from the phenotypic discordance of the dizygous twins.

Results

The mean ± SD of intra-pair concordance was higher in the MZ than in DZ twin group (88.1 ± 13.2 vs. 70.7 ± 14.1 respectively, P value < 0.05). Based on the concordance in clinical manifestations in MZ and DZ twins, the environmental effect on the phenotype of FMF is estimated as 11.9% ± 6.6% and the MGs effect as 17.4% ± 15.5% in average.

Conclusions

In FMF the phenotype is affected by MEFV mutations, MGs and EFs in an estimated ratio of about 6:1.5:1 respectively.     

Vegetation ecology of phytogenic hillocks (nabkhas) in coastal habitats of Jal Az-Zor National Park,Kuwait: Role of patches and edaphic factors

Phytogenic sandy hillocks (Arab. ‘nabkha’) are very frequently occurring aeolian deposits along the coastal plain of Kuwait. We investigated the vegetation of 42 nabkhas in a coastal habitat of Jal Az-Zor National Park, Kuwait. Sixty-two species were recorded (47 annuals and 15 perennials) in the studied nabkhas. Four vegetation types were recognized after classifying the vegetation of the nabkhas by TWINSPAN. They were named after their dominating host species which are Nitraria retusa, Zygophyllum qatarense, Haloxylon salicornicum and Panicum turgidum. Using Detrended Correspondence Analysis (DCA) and Canonical Correspondence Analysis (CCA), we assessed the relationships between environmental gradients, floristic composition, species diversity, and geomorphology aspects of the studied habitats. Notable environmental variables affecting the distribution of the vegetation types in the study area were: geomorphological aspect, size of plants forming the core of the nabkha, moisture and nutrients contents, salinity, sand and silt components, and pH.     

The influence of temperature, relative humidity and host factors on the attachment and survival of Boophilus microplus (Canestrini) larvae to skin slices

Attachment of B. microplus larvae was examined using slices (0.5 mm) of bovine skin stretched over a suitable medium. Optimal temperature for attachment lay between 31 and 38°C. At 38°C, 70 to 80% had attached by 4 h but this was followed 6–7 h after the release of the larvae by a significant decrease in the percentage attached. By 8 h, the percentage attached had risen again and remained at 70–80% for the subsequent 16 h. Attachment was not influenced by ambient relative humidity within the range 20–75 % on the time scale studied (16 h). Most larvae denied access to the skin surface at 20 or 45 % R.H. (38°C) died within 24 h. Those allowed to feed survived at 45% but most died at 20% R.H. There was no difference in attachment when bovine or rabbit serum or phosphate buffered saline was used, nor when skin was taken from Zebu × European cattle or Herefords. Attachment was no different when skin was taken from neck, rib or rump, or from cattle with different levels of resistance to B. microplus but there was reduced attachment with mouse skin. Attachment was reduced on skin which had been stored at ? 15°C for 1 day but storage at 10°C for 16 h had no effect. These results are related to problems of tick water balance, host specificity and stimuli for tick attachment.     

Seed bank composition and above-ground vegetation in response to grazing in sub-Mediterranean oak forests (NW Greece)

We investigate the persistent soil seed bank composition and its relation to the above-ground flora of grazed and non-grazed sub-Mediterranean deciduous oak forests of NW Greece. Twenty-eight taxa were recorded in the soil seed bank and 83 taxa (70 taxa in plots of seed bank sampling) in the above-ground vegetation. The dominant tree species and many woodland species found in the above-ground vegetation were absent from the soil seed bank. Similarity between the soil seed bank and the above-ground vegetation decreased with grazing, and grazing led to a decrease of species richness in above-ground vegetation and soil seed bank. Beta diversity of vegetation among grazed and among non-grazed plots did not differ, but was significantly higher between grazed and non-grazed areas. Beta diversity of the soil seed bank declined with grazing. When applying classification tree and logistic regression analyses, non-grazed forest sites are clearly differentiated by the presence of Phillyrea latifolia, Euphorbia amygdaloides and Brachypodium sylvaticum. PCA ordination of above-ground species composition reflected a gradient from sites grazed by ruminants to non-grazed sites, but no clear structure was detected in the seed bank.     

Population size and structure of three mussel species (Bivalvia: Unionidae) in a northeastern German river with special regard to influences of environmental factors

Unionid mussels are of great ecological importance in running and standing waters, however their populations declined continually during the 20th century. In order to collect more data on the situation of these mussels in running waters, the populations of Anodonta anatina, Anodonta cygnea, and Unio tumidus (Unionidae) were investigated in the northeastern German river Ryck from 1996 to 1998. At three sampling stations along the river, the mussel stocks as well as sediment and water properties were analyzed. In this river abundances of up to 138.7 indiv./m² were detected. The average population densities varied from 10.9 to 34.9 indiv./m². More critically however, the age structures showed significant signs of irregular reproductive success and overaging. Consequently, the mussel stocks are going to decline, and furthermore, U.tumidus should be listed as an endangered species in the Ryck river. Negative influences on bivalves can be expected from sporadically occurring low oxygen and high ion concentrations in the water. But after all, the conditions within the sediments seem to be decisive for the survival of juvenile mussels and thus for the age structure of the populations.     

Damage in beech forests of Schleswig-Holstein (Northern Germany) in relation to forest structure and soil conditions

The knowledge of the relationship between plant communities and soil types presents a valuable interpretation base for damage assessment. As expected, trees growing on unfavourable sites (e.g. on soils with impeded water) react more sensitively to secondary stress factors such as air pollutants than trees on suitable sites. With a declining nutrient supply in the series Elymo-Fagetum, Asperulo-Fagetum, Violo-Quercetum we recognize a corresponding increase of the damage level in the tree layer of these forest communities. However, ecological site parameters are not always sufficient for an explanation of the high damage level of some communities. It is supposed that a specific structure of these communities is responsible for a considerable proportion of severely damaged trees. Particular crown integration in the tree layer of forests and damage levels are closely connected. The influence of forest structure therefore masks the damage components affected by soil conditions.     

A response to Gatali and Wallin (2015) Bird diversity in the savanna habitats of Akagera National Park,Rwanda, in the post-war recovery period

The paper ‘Bird diversity in the savanna habitats of Akagera National Park, Rwanda, in the post-war recovery period’ by Gatali and Wallin (Ostrich 86(3): 267–276, 2015) makes several claims for new species records for Akagera National Park and Rwanda. We found that Gatali and Wallin recorded several species considered very rare in Rwanda and new discoveries; these findings often contradicted the existing literature. We doubt the validity of 34 species records and we aim to demonstrate that these claims are mostly the result of misidentification or human error and consider that future researchers should use their findings with caution. Some findings around more common species may be validated through further studies and we encourage others to conduct fieldwork in Akagera National Park.     

Microbial encrustations from the Middle Oxfordian-earliest Kimmeridgian lithofacies in the Prebetic Zone (Betic Cordillera, southern Spain): characterization, distribution and controlling factors

Two main types of microbial encrustation were identified in Middle Oxfordian to lowermost Kimmeridgian deposits in the Prebetic Zone (southern Spain), showing existing relationships between skeletal content, fabric and morphology of these organosedimentary structures. Laminated planar and concentric encrustations relate to peloidal fabrics (mainly constituted of microbes = microbial laminated fabrics s. str. and microbial oncoids s. str.), as well as to dense microbial fabrics periodically colonized by encrusting foraminifera (microbial laminated fabrics with nubeculariids and microbial oncoids with nubeculariids). Sedimentation rates, substrate stability and grain size, as well as illumination, influenced microbial growth pattern as major controlling factors in low-energy conditions, and forced palaeogeographic and stratigraphic patterns of distribution. Significant encrustation was identified in terrigenous-poor lithofacies from the middle (Transversarium-Bifurcatus zones) to the outer (Transversarium-Bimammatum zones) shelf in the Prebetic Zone. Rare-to-absent encrustation characterized terrigenous-rich deposits (Bimammatum and Planula zones) in the area.     

Deadwood in Relation to Stand Management and Forest Type in Central Apennines (Molise,Italy)

Deadwood is an important component for conserving carbon stock and maintaining species diversity. Scarce information is, at present, available concerning the amount and composition of deadwood in Mediterranean-type ecosystems. In this study, 21 sites were chosen to characterize different forest types among representative managed and unmanaged stands in the Central Apennines (Molise, Italy). Data were collected to assess living tree and deadwood volumes, and the relative abundance of different deadwood components in decay classes. The information gathered was related to human-induced disturbances on a regional scale. There were substantial differences in the deadwood volumes between managed and unmanaged stands, although this was not the case in the living tree volumes. Deadwood volumes were larger in unmanaged than in managed stands. In particular, large amounts of deadwood were found in managed Mediterranean and Anatolian fir forests, probably due to minimal management practices. Dead downed trees were less represented in managed forests as they are normally removed to facilitate logging activities. Logs occurred more frequently in managed stands as logging residues left on site. Most deadwood material belonged to early decay classes. Proportionally larger amounts of deadwood ascribed to class 1 in managed stands correlated with recent cutting activities. The relatively large amounts of deadwood attributed in unmanaged stands to class 3 demonstrate its longer persistence in unmanaged forests. This study represents a first systematic analysis of deadwood occurrence in a typical Mediterranean forest area, and should be useful in defining important objectives for sustainable forest management.     

Initial responses of rove and ground beetles (Coleoptera,Staphylinidae, Carabidae) to removal of logging residues following clearcut harvesting in the boreal forest of Quebec,Canada

Increased interest in biomass harvesting for bioenergetic applications has raised questions regarding the potential ecological consequences on forest biodiversity. Here we evaluate the initial changes in the abundance, species richness and community composition of rove (Staphylinidae) and ground beetles (Carabidae), immediately following 1) stem-only harvesting (SOH), in which logging debris (i.e., tree tops and branches) are retained on site, and 2) whole-tree harvesting (WTH), in which stems, tops and branches are removed in mature balsam fir stands in Quebec, Canada. Beetles were collected throughout the summer of 2011, one year following harvesting, using pitfall traps. Overall catch rates were greater in uncut forest (Control) than either stem-only or whole-tree harvested sites. Catch rates in WTH were greater than SOH sites. Uncut stands were characterized primarily by five species: Atheta capsularis, Atheta klagesi, Atheta strigosula, Tachinus fumipennis/frigidus complex (Staphylinidae) and to a lesser extent to Pterostichus punctatissimus(Carabidae). Increased catch rates in WTH sites, where post-harvest biomass was less, were attributable to increased catches of rove beetles Pseudopsis subulata, Quedius labradorensis and to a lesser extent Gabrius brevipennis. We were able to characterize differences in beetle assemblages between harvested and non-harvested plots as well as differences between whole tree (WTH) and stem only (SOH) harvested sites where logging residues had been removed or left following harvest. However, the overall assemblage response was largely a recapitulation of the responses of several abundant species.     

Limitations on reproductive success in endemic <Emphasis Type="Italic">Aquilegia viscosa</Emphasis> (Ranunculaceae) relative to its widespread congener <Emphasis Type="Italic">Aquilegia vulgaris</Emphasis>: the interplay of herbivory and pollination

Plant reproduction can be strongly affected by herbivory and different features of pollination ecology, such as pollinator visitation rates and capacity for self-pollination. The purpose of this study is to compare the relative impact of herbivory and pollination on maternal reproductive success in endemic Aquilegia viscosa and its widespread congener Aquilegia vulgaris. We conducted herbivore exclusion experiments in two populations of each species in 2 different years and showed that the maternal fertility of A. viscosa was significantly more limited by floral predation and pre-dispersal seed predation than its widespread congener. In the absence of herbivory, A. viscosa retained significantly lower maternal fertility than A. vulgaris. Experimental pollinations in an insect-free glasshouse showed that the two species have an equal seed/ovule ratio both in the absence of pollinators and in the presence of non-limiting outcross pollination. Pollinator visitation rates were significantly higher in populations of A. vulgaris than in populations of A. viscosa. In addition, path analyses showed that spur length, an important trait for pollinator attraction in Aquilegia, and, indirectly sepal and petal width, contribute positively to the seed/ovule ratio in A. vulgaris, but not in A. viscosa. These results indicate that maternal fertility of endemic A. viscosa is strongly reduced by flower and seed predation despite low rates of pollinator visitation, and that pollen or resource limitation in the wild may further reduce maternal fertility. Finally, floral trait variation appears to be decoupled from fertility variation in endemic A. viscosa, which possibly constrains the evolution of reproductive traits in this species.