Species dilemma of musk deer (Moschus spp) in India: molecular data on cytochrome c oxidase I suggests distinct genetic lineage in Uttarakhand compared to other Moschus species

Musk deer are of high conservation priority owing to poaching pressure because of its musk pod. Representation of musk deer status using genetics is poorly documented in India, and it is not confirmed as to how many species of musk deer are present. We characterize for the first time, the genetic diversity of musk deer from Uttarakhand using Cytochrome Oxidase sub-unit (COI) gene (486?bp) and compared with the data available for other species. Results revealed the presence of six haplotypes in the Uttarakhand population amongst 17 sequences. Of these, 12 sequences shared the single haplotype. The intra-species sequences divergence was 0.003–0.017, whereas divergence with other species of musk deer was 0.071–0.081. Bayesian phylogenetic tree revealed that samples from Uttarakhand formed a separate clade with respect to other species of musk deer, whereas three species distributed in China clustered in the same clade and showed low sequences divergence, i.e., 0.002–0.061. Because of different ecomorph reported, we suggest using the barcoding based approach for inter and intra-species distinction and delineating species boundaries across the range for effective conservation. Besides, systematic classification, DNA barcoding would also help in dealing wildlife offence cases for disposal of the legal report in court.     

陕西凤县林麝家庭养殖:历史、现状与繁殖特性

通过访问调查,对陕西凤县林麝家庭养殖历史和现状进行了分析。结果表明,1986~2001年是凤县林麝养殖的发展缓慢期,2002~2005年是快速发展期。2005年底,该县有林麝养殖户40家,存栏数为447头。大多数家庭林麝养殖规模小,近一半(47.5%)养殖户的存栏数不超过5头,大多数养殖户(65%)的存栏数低于10头。圈养林麝具偏雄性死亡特征,主要在5月繁殖,每胎产仔1.6±0.5只,双胎率为62.2%,雌雄比为0.946∶1。目前,所有养殖户养殖林麝的主要目的是销售种源,绝大多数养殖户对林麝养殖前景看好,并将扩大养殖规模。对林麝家庭养殖中出现的一些问题进行分析,并提出了相应的解决方案。     

Estimating brocket deer (<Emphasis Type="Italic">Mazama gouazoubira</Emphasis> and <Emphasis Type="Italic">M. americana</Emphasis>) abundance by dung pellet counts and other indices in seasonal Chiquitano forest habitats of Santa Cruz,Bolivia

We assessed dung and track counts for indexing brocket deer abundance in seasonal habitats on a ranch where hunting is not practiced in the Bolivian lowlands. Surveys were replicated along four 10-km trails (totaling 180 km in the wet season and 90 km in the dry season) through four semideciduous forest habitats. Dung pellets and tracks were identified as belonging to Mazama gouazoubira or M. americana by size and shape. Pellet groups lasted more than 1 month during the dry season, but decayed within 1–2 weeks in the wet season. Mean density estimates based on dung counts varied widely between seasons for gray brockets (from 6.77±4.0 to 30.57±23.5 ind/km²; mean±SD) but not for reds (from 3.52±4.6 to 6.98±7.2 ind/km²). These values were probably too high due to underestimation of daily deposition rate, and were reduced during the wet season because of dung decay. We found consistently more dung in the dry season and more tracks in the wet season. Sightings of red brockets were too few for line-transect analysis (n=6), but those of gray brockets (n=42) produced an overall estimate of 5.6 ind/km² (95% CI=3.5–9.0 ind/km²). Different estimates indicated that gray brockets were more abundant than reds in all situations, except perhaps in the riverine forest. Environmental factors affected these indices of abundance differently, and while we recommend the use of dung counts in dry-season scenarios, we think that index reliability should be assessed locally before conducting population comparisons.     

A new species of Themus (Themus) Motschulsky from Yunnan,China and a redescription of T. (T.) testaceicollis Wittmer, 1983 (Coleoptera,Cantharidae)

A new species is described, Themus (Themus) dimorphus sp. n. from Yunnan, China. Themus (Themus) testaceicollis Wittmer, 1983 is redescribed and compared with the new species. The two species are illustrated with habitus and genitalia of both sexes and abdominal sternites VIII of female.     

世界黑莓产业发展和研究现状及前景

在查阅大量文献资料的基础上,结合作者的研究成果,对国内外黑莓(Rubus spp.)产业发展及研究现状进行了综述,并分析了存在的问题,阐述了中国黑莓产业的发展优势和产业化前景.目前黑莓在全世界的种植面积约为20 035 hm2,年产量1.5×105 ～2.0×105 t,栽培区域遍及各大洲,其中塞尔维亚的黑莓种植面积位居世界第一,美国的黑莓年产量居世界第一,亚洲仅中国种植黑莓;近几年来,罗马尼亚、波兰、墨西哥、智利、匈牙利、中国以及美国的黑莓种植面积增长较快;因黑莓极不易贮存,绝大多数鲜果用于加工.国外以常规育种技术为主、分子技术为辅培育出许多黑莓品种,栽培技术已经非常成熟,成功实现了机械化采收,并逐步推广黑莓的有机生产体系和大棚栽培技术.国外黑莓生产中面临的主要问题是经济、冻害和病虫害等.黑莓于1986年引入中国,从1994年开始推广,至2010年种植面积约4 500 hm2,主要集中在江苏省的溧水县、赣榆县和溧阳市,90％以上鲜果加工成速冻果出口.在国外引种和国内野生种质资源收集的基础上,中国的研究者开展了黑莓的选种和育种研究,并培育和筛选出适宜于本地种植的黑莓优良品种;黑莓的栽培、加工技术研究也取得了显著的成果,并研制出一些加工产品.当前中国黑莓产业主要面临主栽品种单一、农药残留量超标、栽培条件差等方面的问题,制约了黑莓产业的发展.由于黑莓适于低山丘陵栽培,具有结果早、见效快、营养价值高等优势,在中国具有广阔的发展前景.     

Genetic structure of coastal and inland populations of the annual halophyte Suaeda maritima (L.) dumort. in Central Europe, inferred from amplified fragment length polymorphism markers

Naturally occurring inland salt habitats are highly threatened due to increasing fragmentation and area reduction, while the surroundings of former potash mining dumps have experienced a massive invasion by halophytes over the last 20 years. We reconstructed colonisation patterns of these purely anthropogenic inland salt sites using molecular markers in the obligate halophyte Suaeda maritima (L.) dumort. (Chenopodiaceae), a typical plant in such areas. In the present study, 120 individual plants from 40 coastal and inland populations in Central Europe were subjected to AFLP analysis with nine primer combinations. A total of 243 AFLP band positions were scored as presence/absence characters. Genetic diversity values were not significantly different in populations from natural and anthropogenic inland salt sites as compared to coastal habitats. Results from principal coordinate analysis, neighbour-joining analysis and analysis of molecular variance ( amova ) all indicated that most of the genetic variation is preserved within populations, while genetic differentiation among populations is comparatively low. We conclude that S. maritima has repeatedly and independently colonised the surroundings of former potash mining dumps in Central Germany. However, the absence of founder effects and the lack of phylogeographic structure prevented us from identifying putative donor populations.     

Optical and anatomical characteristics of bracts from the Chinese "glasshouse" plant, Rheum alexandrae Batalin (Polygonaceae), in Yunnan, China

Bracts that lacked chlorophyll were compared with rosette leaves on the Chinese glasshouse plant Rheum alexandrae Batalin. The structures were analyzed anatomically and with photospectrometry. Histological features were significantly different between the bracts and the rosette leaves. Epidermal pavement cells and palisade cells were larger in the bracts than in the rosette leaves, but the ratio of the intercellular spaces to the cells in the palisade layer was the same in the two structures. Absorption spectrum analyses of the half-translucent bracts showed that, despite their thinner structure, they absorbed ultraviolet (UV) radiation more efficiently than did the green rosette leaves. The characteristics of the R. alexandrae bracts were different from those of the Himalayan glasshouse plant Rheum nobile. These results suggest that R. alexandrae evolved bracts as an adaptive strategy to protect the inflorescence from UV radiation. Received: August 22, 2001 / Accepted: October 15, 2001     

Health risk assessment of heavy metals in soils and maize (Zea mays L.) from Yushu,Northeast China

To investigate heavy metal accumulation in soils and evaluate health risk through maize consumption, a total of 196 soils and 55 maize samples were collected from Yushu, China, one of the most important maize production bases. The mean contents of Cd, Cr, Cu, Zn and Pb were 0.119, 56.51, 19.21, 70.58, and 34.42 mg kg^?1 for soils and were 0.014, 0.68, 1.33, 17.15 and 0.02 mg kg^?1 for maize, respectively. The contents of Cr, Cu, Zn and Pb in all soil and maize samples did not exceed safety thresholds, but the percentages of Cd content above guideline values of Chinese Environmental Quality Standards for Soil and maximum permissible limits for maize were 6.6% and 1.8%, respectively. The spatial distribution and correlation analysis suggested that Cr and Cu in soil were of lithogenic origin, while Zn and Pb were associated with coal combustion exhausts and chemical fertilizer application. The main source of Cd may be phosphate fertilizer application. The average target hazard quotients were all less than 1 and the average hazard index for adults was 0.065, indicating that there was not a potential health risk through maize.     

Photosynthetic Electron Transport,Photophosphorylation, and Antioxidants in Two Ecotypes of Reed (Phragmites Communis Trin.) from Different Habitats

We compared chloroplast photochemical properties and activities of some chloroplast-localised enzymes in two ecotypes of Phragmites communis, swamp reed (SR, C₃-like) and dune reed (DR, C₄-like) plants growing in the desert region of north-west China. Electron transport rates of whole electron transport chain and photosystem (PS) 2 were remarkably lower in DR chloroplasts. However, the electron transport rate for PS1 in DR chloroplasts was more than 90 % of the activity similar in the SR chloroplasts. Activities of Mg²⁺-ATPase and cyclic and non-cyclic photophosphorylations were higher in DR chloroplasts than in the SR ones. The activities of chloroplast superoxide dismutase (SOD) and ascorbate peroxidase (APX), both localised at or near the PS1 complex and serving to scavenge active oxygen around PS1, and the content of ascorbic acid, a special substrate of APX in chloroplast, were all higher in DR chloroplasts. Hence reed, a hydrophytic plant, when subjected to intense selection pressure in dune habitat, elevates its cyclic electron flow around PS1. In consequence, it provides extra ATP required by C₄ photosynthesis. Combined high activities of active oxygen scavenging components in DR chloroplasts might improve protection of photosynthetic apparatus, especially PS1, from the damage of reactive oxygen species. This offers new explanation of photosynthetic performance of plant adaptation to long-term natural drought habitat, which is different from those, subjected to the short-term stress treatment or even to the artificial field drought.     

Delineation of Chondrus (Gigartinales, Florideophyceae) in China and the origin of C. crispus inferred from molecular data

Complete nuclear ribosomal DNA (nrDNA) internal transcribed spacer (ITS) sequences were obtained for 18 Chondrus populations collected at 15 sites from eight countries worldwide. Pairwise comparisons with the multiple alignment revealed that intraspecific divergences of ITS sequences ranged from 0.3 to 1.8% in C. crispus Stackhouse (except for the entity SVLH from France) and from 0.0 to 0.6% in C. ocellatus Holmes, whereas interspecific divergences in Chondrus varied from 1.4 to 5.0%. Three phylogenetic methods (neighbour joining, maximum parsimony and maximum likelihood) confirmed three main lineages: the North Atlantic lineage containing entities of C. crispus from Canada, France, Germany, England, Portugal, Ireland and Wales; a second lineage comprising three species: C. sp. 1, C. armatus (Harvey) Yamada et Mikami, and C. pinnulatus (Harvey) Okamura from the Northern Pacific; and a third lineage containing just one species: C. ocellatus from the Northern Pacific. Chondrus yendoi Yamada et Mikami separated from other Chondrus species singly. nrDNA ITS data indicate that a previous assignment of C. sp. 2 to Mazzaella japonica (Mikami) Hommersand may be incorrect, and additional evidence is needed to resolve the generic placement of this entity. It is inferred from the nrDNA ITS data that three Chondrus species are presently known in China with two, C. ocellatus and C. nipponicus, in Qingdao and two, C. armatus and C. nipponicus, in Dalian. We hypothesize that the ancestor of North Atlantic C. crispus had a Pacific origin, and that the present distribution of C. crispus in the Atlantic Ocean correlates with a trans-Arctic dispersal and vicariance events associated with Pleistocene glaciation maxima.     

A review of the genus Raveniola (Araneae, Nemesiidae) in China, with notes on allied genera and description of four new species from Yunnan

The Chinese representatives of Raveniola Zonstein, 1987 are currently recognized to comprise seven species. Four new species - Raveniola montanasp. n. (♂♀), Raveniola shangrilasp. n. (♂), Raveniola songisp. n. (♂) and Raveniola yunnanensissp. n. (♂) - are described from the highlands of Yunnan Province, China. According to some characters (shape of the palpus, palpal tibia and tibia I in males) they can be placed together with Raveniola hebeinica Zhu, Zhang & Zhang, 1999 and with Raveniola guangxi (Raven & Schwendinger, 1995), comb. n., transferred here from Sinopesa Raven & Schwendinger, 1995. The current generic position of Raveniola xizangensis (Hu & Li, 1987) is confirmed. Other Chinese nemesiids referred previously to Raveniola are transferred to Sinopesa: Sinopesa chinensis (Kulczyński, 1901), comb. n., Sinopesa sinensis (Zhu & Mao, 1983), comb. n. and Sinopesa chengbuensis (Xu & Yun, 2002), comb. n. The relationships between these Asian genera and their relations to Afrotropical nemesiids are discussed.     

Influence of DNA isolation from historical otoliths on nuclear-mitochondrial marker amplification and age determination in an overexploited fish, the common sole (Solea solea L.)

Historical otolith collections are crucial in assessing the evolutionary consequences of natural and anthropogenic changes on the demography and connectivity of commercially important fish species. Hence, it is important to define optimal protocols for purifying DNA from such valuable information sources while avoiding any damage to the physical structure of the otolith. Before being able to conclude on the harmlessness of a method, it is important to validate protocols on different kinds of otoliths by testing purification methodologies under standardized conditions. Here we compare the effect of two DNA extraction methods on the success in identifying the age in an overexploited marine fish, the common sole (Solea solea L.). To ensure optimal future population genetic and demographic analyses, we assessed DNA quantity and tested the DNA quality by investigating the amplification success of a mitochondrial and nuclear marker. Our results show that the choice of the DNA extraction method had a significant effect on the success of using these otoliths in age and growth analyses. Standard commercial and published protocols resulted in a severe damaging of the otolith structure, hampering accurate preparation and analyses of the morphological structures of the otoliths. Shortening the lysis time and lowering the EDTA (ethylene diamine tetraacetic acid) and SDS (sodium dodecylsulphate) concentration turned out to be beneficial for the stability of otolith structure, while maintaining an overall high DNA quality measured through polymerase chain reaction amplification success. We therefore recommend that care should be taken when choosing the extraction method for a molecular study on archived samples, in order to enable the maximal use of information embedded in historical material.     

Natural hybridization origin of <Emphasis Type="Italic">Rhododendron agastum </Emphasis>(Ericaceae) in Yunnan,China: inferred from morphological and molecular evidence

The natural hybridization that occurs between two sympatric species of Rhododendron subgenus Hymenanthes in Yunnan, China, was investigated. The assumed parents, Rhododendron delavayi Franch. and R. decorum Franch., are morphologically distinct, and the putative hybrid species, R. agastum Balf. f. et W. W. Smith, has an intermediate morphology. We used the main morphological characters, sequences of the nuclear ribosomal DNA ITS region, and the chloroplast DNA trnL-F intronspacer to analyze the three species, and compared these morphological and molecular data with an artificial hybrid between R. decorum (♀) × R. delavayi (♂). From the results, we conclude that R. agastum is a natural hybrid between a female R. delavayi and a male R. decorum.     

The occurrence and identification of <Emphasis Type="Italic">Setaria italica</Emphasis> (L.) P. Beauv. (foxtail millet) grains from the Chengtoushan site (ca. 5800 cal B.P.) in central China,with reference to the domestication centre in Asia

Archaeobotanical remains of Setaria grains and chaff were found at the Chengtoushan site in south-central China (ca. 5800 cal b.p.). Grain shape was determined, using length to breadth ratios, and morphological variation in the upper lemma of modern domesticated and wild Setaria species were examined using scanning electron microscopy as a basis for identifying archaeobotanical remains. Grains of S. viridis, S. yunnanensis, and S.×pycnocoma are slender, whereas S. italica, S. italica var. germinica, S. lutescenes, S. faberi, S. glauca, S. pallidefusca and S. intermedia are round in shape. The papillae distributed on the upper lemma of S. italica are small (8–15 μm) with a non-ridged base, while other Setaria species have large papillae (15–20 μm) with a widely ridged base. The remains of the Setaria from the Neolithic layers at Chengtoushan included S. italica, based on these identification characters. These new finds of foxtail millet are the earliest discoveries from the Yangtze River basin of southern China and are also the earliest evidence for co-cultivation of foxtail millet with rice. The implications of these findings for understanding foxtail millet domestication centres are discussed.