低温环境中乳酸菌的开发利用

乳酸菌作为一种益生资源,越来越为人们所重视.在自然界存在的乳酸菌中,有一类虽然人们一直在利用,但是还没有充分的研究和开发,这类乳酸菌就是低温环境中生长的乳酸菌.国外目前所见有关低温乳酸菌的报道多集中于低温冷藏肉、鱼制品及泡菜中的乳酸菌,集中研究和应用的菌属主要包括Leuconostoc和Lactobacillus,而国内这方面的研究并不多见.笔者根据目前国内外低温乳酸菌的研究现状,阐述了其存在环境、种类及相应作用,并对其研究涉及的领域、趋势及应用前景进行了探讨和展望,以期为国内这类乳酸菌资源的研究开发提供参考和依据.     

The eukaryote alternative: Advantages of using yeasts in place of bacteria in microbial biosensor development

The relationship between Man and yeast has been a successful and enduring one. The characteristics of yeast have made it an ideal tool in scientific research and as such, it has been used extensively. In this review some of the advantages, methods and applications of yeasts in the biosensor field are outlined. In doing so, we propose a eukaryotic alternative to the current battery of bacteria-based microbial biosensors.     

A microbial biosensor system for dihalomethanes

A biosensor system able to measure dichloromethane (DCM) and other dihalomethanes has been developed. The analysis is based on Hyphomicrobium DM2 cells immobilized in alginate. A combination of transducers consisting of a flow-calorimeter followed by a chloride-sensitive electrode has been used. By this design it was possible to monitor different aspects of the cell metabolism from one and the same pulse of substrate. The detection limit for the biosensor was 0.1 µM dichloromethane. The biosensor system can be used for continuous measurements in a sample stream.     

Preliminary observations on psychrotrophic and psychrophilic,heterotrophic bacteria from antarctic water samples

Bacteria isolated from antarctic sea and lake water samples were examined for growth at 5 °C and 25 °C. Of 250 isolates, 249 were psychrotrophic and one was psychrophilic. The effect of temperature on the growth rate of the latter (strain 755) and a typical psychrotroph (strain 203A) was described by the square root of the growth rate constant. T_MIN values calculated from this model confirmed the strains as psychrophile and psychrotroph.Identification of 93 isolates showed the majority to be Pseudomonas (82%), with Flavobacterium and Moraxella representing 13% of the isolates. The remainder were coryneforms and yeasts. Isolate 611 was studied in detail because of its unusual morphology. This strain has features in common with the genera Spirosoma, Runella and Flectobacillus, but cannot be assigned with certainty. It may represent a new taxon of curved, gram negative bacteria.     

极区低温海洋细菌及其产酶情况的初步研究

通过对大量极区低温海洋菌株的分离、筛选及进一步的生理生化特性研究,获得1株最适生长温度为15℃、生长温度上限为35℃、产蛋白酶及多种多糖水解酶的耐冷细菌。该菌过氧化氢酶为阳性,具有弱嗜盐性;蔗糖、可溶性淀粉是有利于菌株生长的碳源物质,而酵母膏则是效果最佳的氮源物质。该菌株所产蛋白酶的最适作用温度为55℃,而淀粉酶、琼脂酶及纤维素酶的最适作用温度皆为35℃。     

Subzero temperature operating biosensor utilizing an organic solvent and quinoprotein glucose dehydrogenase

A subzero temperature operating biosensor was constructed using immobilized quinoprotein glucose dehydrogenase (PQQGDH), glassy carbon electrode, soluble electron mediator (ferrocene monocarboxylic acid), and an organic solvent, ethylene glycol, as an antifreezing reagent. Using this biosensor, glucose concentration can be determined even at -7 degrees C. At this temperature, the response was 20% of that obtained at 20 degrees C. This is the first study describing a subzero temperature operating biosensor. (c) 1993 John Wiley & Sons, Inc.     

Expression of CspA and GST by an Antarctic psychrophilic bacterium Colwellia sp. NJ341 at near-freezing temperature

Summary A psychrotrophic bacterium Colwellia sp. NJ341 from Antarctic sea ice could grow at −5 and 22 °C, and the extent of cellular protein content and growth were greater at low temperatures (0–10 °C) than at higher temperatures. SDS-PAGE analysis demonstrated the presence of a 7 kDa cold-shock protein. The further result of two-dimensional electrophoresis (2-DE) showed that two proteins a and c were newly synthesized at near-freezing temperatures. With matrix-assisted laser desorption/ionization mass spectrometry (MALDI-TOF MS) analysis, proteins a and c were identified as glutathione S-transferase (GST) and cold-shock protein A (CspA), respectively, which were involved in cold-adaptation at near-freezing temperature in an Antarctic psychrophilic bacterium Colwellia sp. NJ341.     

微生物降解芘过程中的关键细菌

【目的】探究在渤海沉积物中参与降解芘的关键细菌及他们之间潜在的相互关系。【方法】构建以芘为唯一碳源的微宇宙培养体系驯化来自渤海的表层沉积物,借助Illumina Hiseq 2500获取驯化过程中的细菌群落组成,基于CCLasso算法及相对丰度数据预测细菌之间的相互作用关系以构建微生物生态网络。【结果】30 d后芘的降解率为(67.07±2.37)%,细菌群落结构也发生了明显改变:Alphaproteobacteria、Flavobacteriia、Planctomycetia等的相对丰度明显增加,而Deltaproteobacteria、Anaerolineae及Spirochaetes等则明显减少。本研究获得一个由29个点143条边构成的微生物生态网络。分类已知的属中,Erythrobacter及Planctomyces等拥有较高的点度中心度。较强的互作关系发生在Erythrobacter与Flavobacteriaceae、Alphaproteobacteria中的未知属之间。【结论】在芘的微生物降解过程中,关键细菌之间存在紧密互作。Erythrobacter为关键细菌的代表属。     

Monitoring glutamine in animal cell cultures using a chemiluminescence fiber optic biosensor

Together with flow injection analysis (FIA), a chemiluminescence (CL) fiber optic biosensor system has been developed for determining glutamine in animal cell cultures. Glutaminase (GAH) and glutamate oxidase (GLO) were onto separate porous aminopropyl glass beads via glutaraldehyde activation and packed to form an enzyme column. These two enzymes acted in sequence on glutamine to produce hydrogen peroxide, which was then reacted with luminol in the presence of ferricyanide to produce a light signal. An anion exchanger was introduced on-line to eliminate interfering endogenous glutamate in view of its negative charge at pH above 3.22 (isoelectric pH). Among several resins tested, the acetate form was most effective, and this type of ion exchanger also effectively adsorbed uric acid, acetaminophen, and aspartic acid.There was an excellent linear relationship between the CL response and standard glutamine concentration in the range 1 to 100 muM. A complete analysis could be performed in 2 min, including sampling and washing with a good reproducibility (+/- 4.4%). Both the bi-enzymic and ion exchange columns were useful for at least 500 analyses when the biosensor system was applied for the glutamine determination in murine hybridoma cell cultures and insect cell cultures. The values obtained compared well with those of HPLC, thus validating the applicability of the CL fiber optic system. (c) 1993 John Wiley & Sons, Inc.     

Effect of temperature on growth parameters of psychrophilic bacteria and yeasts

Three bacterial (Pedobacter heparinus, Pedobacter piscium, Pedobacter cryoconitis) and three yeast strains (Saccharomyces cerevisiae, Leucosporidiella creatinivora, Rhodotorula glacialis) of different thermal classes (mesophiles and psychrophiles) were tested for the effect of temperature on a range of growth parameters, including optical density, viable cell numbers, and cell dry mass, in order to determine the temperature conditions under which maximum biomass formation is obtained. Maximum values of growth parameters obtained at the stationary growth phase of the strains were used for statistical calculation. Temperature had a significant (P ≤ 0.05) effect on all growth parameters for each strain; correlations between the growth parameters were significant (P ≤ 0.05–0.01). The maximum growth temperature or the temperature at which microbial growth was fastest was in no case the temperature at which the investigated strains produced the highest amount of biomass. All tested psychrophilic bacteria and yeast strains produced highest amounts of cells (as calculated per mg cell dry mass or per OD₆₀₀ unit) at 1°C, while cell numbers of mesophiles were highest at 20°C. Thus, cultivation temperatures close to the maximum growth temperature are not appropriate for studying psychrophiles.     

Methanogenesis at low temperatures by microflora of tundra wetland soil

Active methanogenesis from organic matter contained in soil samples from tundra wetland occurred even at 6 °C. Methane was the only end product in balanced microbial community with H₂/CO₂ as a substrate, besides acetate was produced as an intermediate at temperatures below 10°C. The activity of different microbial groups of methanogenic community in the temperature range of 6–28 °C was investigated using 5% of tundra soil as inoculum. Anaerobic microflora of tundra wetland fermented different organic compounds with formation of hydrogen, volatile fatty acids (VFA) and alcohols. Methane was produced at the second step. Homoacetogenic and methanogenic bacteria competed for such substrates as hydrogen, formate, carbon monoxide and methanol. Acetogens out competed methanogens in an excess of substrate and low density of microbial population. Kinetic analysis of the results confirmed the prevalence of hydrogen acetogenesis on methanogenesis. Pure culture of acetogenic bacteria was isolated at 6 °C. Dilution of tundra soil and supply with the excess of substrate disbalanced the methanoigenic microbial community. It resulted in accumulation of acetate and other VFA. In balanced microbial community obviously autotrophic methanogens keep hydrogen concentration below a threshold for syntrophic degradation of VFA. Accumulation of acetate- and H₂/CO₂-utilising methanogens should be very important in methanogenic microbial community operating at low temperatures.     

A fluorescence-based fiber optic biosensor for the flow-injection analysis of penicillin

A penicillin fiber optic sensor is described. The sensor is based on co-immobilization of a pH indicator, fluorescein isothiocyanate (FITC), and penicillinase on a preactivated biodyne B membrane attached to the end of a bifurcated optical fiber. The characteristics of the sensor are investigated in conjunction with a flow injection analysis system. The proposed sensor is reversible and responds to penicillin in the concentration range of 1 x 10(-4) to 5 x 10(-2) mol/L. The application of this sensor to penicillin analysis in some pharmaceutical samples is demonstrated.     

低温乳酸菌复合系的构建、培养条件优化及在玉米干秸杆微贮中的应用

[目的]研究筛选得到的低温乳酸菌复合菌系(LAC-1)的最佳培养条件及应用于玉米干秸杆微贮的效果.[方法]通过连续限制性培养的方法,以pH为指标进行低温乳酸菌复合系的筛选;利用单因素试验、Box-Benhnken试验设计和响应面的分析方法对低温乳酸菌复合系的培养条件进行优化.[结果]筛选获得培养液pH下降迅速、变化稳定及接种干玉米秸杆后可降低发酵体系pH、提高发酵饲料感官品质的低温乳酸菌复合菌系LAC-1.培养时间对LAC-1的pH降低速度影响最大,温度次之,接种量影响最小;响应面分析LAC-1最佳的培养条件为培养温度9.5℃、接种量3.3％和培养时间139 h.经过优化,LAC-1培养过程中pH下降到4.0的时间比优化前缩短48 h,乳酸菌数提高了20.5％.LAC-1接种于干玉米秸秆发酵5d时,秸秆发酵体系pH降至4.1;与对照相比,秸秆发酵饲料可散发出甜酸香味,外观质地松散、色泽鲜亮,可溶性碳水化合物含量降低了46.3％,霉菌、恶臭醋酸杆菌和酵母菌数量显著降低,乳酸菌数量提高了33.3％.[结论]接种LAC-1可促进干玉米秸秆低温微贮进程,提高饲料品质.     

A multipurpose capacitive biosensor for assay and quality control of human immunoglobulin G

We report a flow‐injection biosensor system with a capacitive transducer for assay and quality control of human immunoglobulin G (hIgG). The sensing platform is based on self‐assembled monolayers (SAMs) of carboxylic acid terminated alkyl‐thiols with covalently attached concanavalin A. The electrochemical characteristics of the sensor surface were assessed by cyclic voltammetry using a permeable redox couple (potassium ferricyanide). The developed biosensor proved capable of performing a sensitive label‐free assay of hIgG with a detection limit of 1.0 µg mL^?1. The capacitance response depended linearly on hIgG concentration over the range from 5.0 to 100 µg mL^?1, in a logarithmic plot. Typical measurements were performed in 15 min and up to 18 successive assays were achieved without significant loss of sensitivity using a single electrode. In addition, the biosensor can detect hIgG aggregates with concentrations as low as 0.01% of the total hIgG content (5.0 µg mL^?1). Hence, it represents a potential post‐size‐exclusion chromatography–UV (post‐SEC–UV) binding assay for in‐process quality control of hIgG, which cannot be detected by SEC–UV singly at concentrations below 0.3% of the total hIgG content. Biotechnol. Bioeng. 2009; 104: 312–320 © 2009 Wiley Periodicals, Inc.     

复合菌系GF-20低温降解玉米秸秆过程中群落演替与理化特性

[背景]秸秆的生物降解具有高效率和环保等特点而备受关注.[目的]明确复合菌系GF-20秸秆降解过程中发挥重要作用的功能微生物类群及其与降解特性的关系.[方法]将复合菌系GF-20在10℃条件下恒温培养,定期取样测定其生长特性及秸秆分解特性,利用MiSeq高通量测序技术,分析不同降解时期复合菌系的群落结构变化规律.[结果...     

Novel BOD (biological oxygen demand) sensor using mediator-less microbial fuel cell

A microbial fuel cell type of biosensor was used to determine the biochemical oxygen demand (BOD) of wastewater. The biosensor gave a good correlation between the BOD value and the coulomb produced. The BOD sensor has been operated for over 5 years in a stable manner without any servicing. This is much longer that that of previously reported BOD biosensors.     

Activities of anionic and cationic trypsins in the temperature range from 5 to 37 degrees C. Mutant anionic trypsins as a model of cold-adapted (psychrophilic) enzymes

Temperature dependences of kinetic constants (k _cat and K _m) were studied for enzymatic hydrolysis of N-succinyl-L-alanyl-L-alanyl-L-prolyl-L-arginine-p-nitroanilide and N-succinyl-L-alanyl-L-alanyl-L-prolyl-L-lysine-p-nitroanilide by bovine cationic and rat anionic (wild-type and mutant) trypsins. The findings were compared with the corresponding literature data for hydrolysis of N-benzoyl-DL-arginine-p-nitroanilide by bovine cationic trypsin and natural trypsins of coldadapted fishes. The anionic and cationic trypsins were found to differ in organization of the S₁ -substrate-binding pocket. The difference in the binding of lysine and arginine residues to this site (S₁) was also displayed by opposite temperature dependences of hydrolysis constants for the corresponding substrates by the anionic and cationic trypsins. The data suggest that the effect of any factor on the binding of substrates (the K _m value) to the anionic and cationic trypsins and on the catalytic activity k _cat should be compared only with the corresponding data for the natural enzyme of the same type. Mutants of rat anionic trypsin at residues K188 or Y228 were prepared by site-directed mutagenesis as approximate models of natural psychrophilic trypsins. Substitution of the charged lysine residue in position 188 by hydrophobic phenylalanine residue shifted the pH optimum of the resulting mutant trypsin K188F from 8.0 to 9.0-10.0, similarly to the case of some natural psychrophilic trypsins, and also 1.5-fold increased its catalytic activity at low temperatures as compared to the wild-type enzyme.     

Adaptation to low temperature and regulation of gene expression in antarctic psychrotrophic bacteria

Exposure to extremes of temperatures cause stresses which are sometimes lethal to living cells. Microorganisms in nature, however, are extremely diverse and some of them can live happily in the freezing cold of Antarctica. Among the cold adapted psychrotrophs and psychrophiles, the psychrotrophic bacteria are the predominant forms in the continental Antarctica. In spite of living in permanently cold area, the antarctic bacteria exhibit, similar to mesophiles, ‘cold-shock’ response albeit at a much lower temperatures, e.g., at 0–5°C. However, because of permanently cold condition and the long isolation of the continent, the microorganisms have acquired new adaptive features in the membranes, enzymes and macromolecular synthesis. Only recently these adaptive modifications are coming into light due to the efforts of various laboratories around the world. However, a lot more is known about adaptive response to low temperature in mesophilic bacteria than in antarctic bacteria. Combined knowledge from the two systems is providing useful clues to the understanding of basic biology of low temperature growing organisms. This article will provide an overview of this area of research with a special reference to sensing of temperature and regulation of gene expression at lower temperature.     

有机卤呼吸微生物菌群营养交互的作用机制

有机卤呼吸细菌(organohalide-respiringbacteria,OHRB)是污染场地土壤与地下水中厌氧降解及生物修复有机卤代污染物的主力军。微生物种群间的资源竞争、生长抑制、代谢交叉喂养(crossfeeding,即营养的动态交换,包括碳源、氮源、氨基酸、维生素、核苷酸、电子供体、电子受体和其他生长因子等)、水平基因转移及其他交互作用机制是群落结构稳定平衡的基础,有利于促进有机卤代污染物消减效率的最大化。本文围绕OHRB种群及与其他微生物种群间的互作机制(如交叉喂养机制、竞争机制及抑制机制等)进行了概述,并对未来互作机制的研究进行了探讨与展望,旨在为有机卤代物污染场地生物修复效率的提高提供科学理论和技术参考依据。