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1.

Key message

This study provides a foundation for further research on root genetic regulation and molecular breeding with emphasis on correlations among root traits to ensure robust root growth and well-developed root systems.

Abstract

A set of 447 recombinant inbred lines (RILs) derived from a cross between Jingdou23 (cultivar, female parent) and ZDD2315 (semi-wild, male parent) were used to analyze inheritance and detect QTLs related to root traits at the seedling stage using major gene plus polygene mixed inheritance analysis and composite interval mapping. The results showed that maximum root length (MRL) was controlled by three equivalent major genes, lateral root number (LRN) was controlled by two overlapping major genes, root weight (RW) and volume (RV) were controlled by four equivalent major genes. Hypocotyl length (HL) was controlled by four additive main genes, and hypocotyl weight (HW) was controlled by four additive and additive × additive epistatic, major genes; however, polygene effects were not detected in these traits. Shoot weight (SW) was controlled by multi-gene effects, but major gene effects were not detected. Twenty-four QTLs for MRL, LRN, RW, RV, SW, HL, HW were mapped on LG A1 (chromosome 5), LG A2 (chromosome 8), LG B1 (chromosome 11), LG B2 (chromosome 14), LG C2 (chromosome 6), LG D1b (chromosome 2), LG F_1 (chromosome 13), LG G (chromosome 18), LG H_1 (chromosome 12), LG H_2 (chromosome 12), LG I (chromosome 20), LG K_2 (chromosome 9), LG L (chromosome 19), LG M (chromosome 7), LG N (chromosome 3), LG O (chromosome 10), separately. Root traits were shown to have complex genetic mechanisms at the seedling stage, SW was controlled by multi-gene effects, and the other six traits were controlled by major gene effects. It is concluded that correlations among root traits must be considered to improve the development of beneficial root traits.  相似文献   

2.
In apricot the bitter flavor of seeds is determined by the amount of amygdalin, a cyanogenic glucoside whose cleavage by endogenous enzymes, upon seed crushing, releases toxic hydrogen cyanide. The presence of such a poisonous compound is an obstacle to the use and commercialization of apricot seeds for human or animal nutrition. To investigate the genetic loci involved in the determination of the bitter phenotype a combined genetic and biochemical approach was used, involving a candidate gene analysis and a fine phenotyping via quantitative nuclear magnetic resonance, on an F1 apricot progeny. Seven functional markers were developed and positioned on the genetic maps of the parental lines Lito and BO81604311 and seven putative QTLs for the bitterness level were determined. In conclusion, this analysis has revealed some loci involved in the shaping of the bitterness degree; has proven the complexity of the bitter trait in apricot, reporting an high variance of the QTLs found over the years; has showed the critical importance of the phenotyping step, whose precision and accuracy is a pre-requisite when studying such a multifactorial character.  相似文献   

3.
4.
QTL analysis of root traits as related to phosphorus efficiency in soybean   总被引:3,自引:0,他引:3  

Background and Aims

Low phosphorus (P) availability is a major constraint to soybean growth and production, especially in tropical and subtropical areas. Root traits have been shown to play critical roles in P efficiency in crops. Identification of the quantitative trait loci (QTLs) conferring superior root systems could significantly enhance genetic improvement in soybean P efficiency.

Methods

A population of 106 F9 recombinant inbred lines (RILs) derived from a cross between BD2 and BX10, which contrast in both P efficiency and root architecture, was used for mapping and QTL analysis. Twelve traits were examined in acid soils. A linkage map was constructed using 296 simple sequence repeat (SSR) markers with the Kosambi function, and the QTLs associated with these traits were detected by composite interval mapping and multiple-QTL mapping.

Key Results

The first soybean genetic map based on field data from parental genotypes contrasting both in P efficiency and root architecture was constructed. Thirty-one putative QTLs were detected on five linkage groups, with corresponding contribution ratios of 9·1–31·1 %. Thirteen putative QTLs were found for root traits, five for P content, five for biomass and five for yield traits. Three clusters of QTLs associated with the traits for root and P efficiency at low P were located on the B1 linkage group close to SSR markers Satt519 and Satt519-Sat_128, and on the D2 group close to Satt458; and one cluster was on the B1 linkage group close to Satt519 at high P.

Conclusions

Most root traits in soybean were conditioned by more than two minor QTLs. The region closer to Satt519 on the B1 linkage group might have great potential for future genetic improvement for soybean P efficiency through root selection.  相似文献   

5.
The phenotype variability and inheritance of reproductive traits were investigated in the medicinal leech. Distribution parameters were determined for the following traits: batch size (X = 4.3 +/- 0.2, sigma = 1.7, CV = 40%, As = 0.23 +/- 0.25, Ex = 0.19 +/- 0.51), number of juveniles in a cocoon (X = 10.9 +/- 0.3, sigma = 4.6, CV = 42%, As = 0.31 +/- 0.15, Ex = 0.23 +/- 0.30), and juvenile weight (X = 32.0 +/- 0.3, sigma = 14.9, CV = 47%, As = 1.38 +/- 0.05, Ex = 3.32 +/- 0.11. A nonlinear negative correlation between the number of juveniles in a cocoon and their weight was found (correlation ratio R = 0.86). It was shown that the environmental variance dominated over the genotypic one in the structure of phenotypic variance of the traits studied. The genetic variability is determined mainly by additive gene interactions and, to a small extent, intralocus dominance. The narrow-sense heritability, h2, for batch size was 0.35-0.40; for the number of juveniles in a cocoon, 0.35; for juvenile weight, 0.42.  相似文献   

6.
Mei, Prunus mume Sieb. et Zucc., is an ornamental plant popular in East Asia and, as an important member of genus Prunus, has played a pivotal role in systematic studies of the Rosaceae. However, the genetic architecture of botanical traits in this species remains elusive. This paper represents the first genome-wide mapping study of quantitative trait loci (QTLs) that affect stem growth and form, leaf morphology and leaf anatomy in an intraspecific cross derived from two different mei cultivars. Genetic mapping based on a high-density linkage map constricted from 120 SSRs and 1,484 SNPs led to the detection of multiple QTLs for each trait, some of which exert pleiotropic effects on correlative traits. Each QTL explains 3-12% of the phenotypic variance. Several leaf size traits were found to share common QTLs, whereas growth-related traits and plant form traits might be controlled by a different set of QTLs. Our findings provide unique insights into the genetic control of tree growth and architecture in mei and help to develop an efficient breeding program for selecting superior mei cultivars.  相似文献   

7.
对橡胶树株产干胶等与胶乳产量相关性状进行了QTL分析。以热研88-13×IAN873杂交授粉子代F1群体为材料,测定其株产干胶、干胶含量、乳管列数、乳管个数和乳管大小等与橡胶树胶乳产量相关的性状,利用FsQtlMap 1.0软件,复合区间作图法(CIM,composite interval mapping),以已构建的SSR连锁图谱为基础进行QTL分析。结果显示,各性状偏度和峰度符合正态分布,除乳管大小外,各性状的平均值和方差有较大变化;株产干胶的变异系数最大,各因子的变异系数顺序为株产干胶>乳管个数>乳管列数>乳管大小>干胶含量;LOD阈值大于2.5,检测到与株产干胶相关的QTL 5个,分别可解释71.3%、69.1%、68.3%、64.4%和62.9%的群体变异,与乳管大小相关的QTL 3个,分别可解释84.5%、81.3%和15.4%的群体变异,未检测到与其他性状相关的QTL。  相似文献   

8.
Yuan L  Tang J  Wang X  Li C 《PloS one》2012,7(6):e38696
During maize development and reproduction, shading stress is an important abiotic factor influencing grain yield. To elucidate the genetic basis of shading stress in maize, an F(2:3) population derived from two inbred lines, Zhong72 and 502, was used to evaluate the performance of six traits under shading treatment and full-light treatment at two locations. The results showed that shading treatment significantly decreased plant height and ear height, reduced stem diameter, delayed day-to-tassel (DTT) and day-to-silk (DTS), and increased anthesis-silking interval (ASI). Forty-three different QTLs were identified for the six measured traits under shading and full light treatment at two locations, including seven QTL for plant height, nine QTL for ear height, six QTL for stem diameter, seven QTL for day-to-tassel, six QTL for day-to-silk, and eight QTL for ASI. Interestingly, three QTLs, qPH4, qEH4a, and qDTT1b were detected under full sunlight and shading treatment at two locations simultaneously, these QTL could be used for selecting elite hybrids with high tolerance to shading and high plant density. And the two QTL, qPH10 and qDTS1a, were only detected under shading treatment at two locations, should be quit for selecting insensitive inbred line in maize breeding procedure by using MAS method.  相似文献   

9.
Global climate change is predicted to have large impacts on the phenology and reproduction of alpine plants, which will have important implications for plant demography and community interactions, trophic dynamics, ecosystem energy balance, and human livelihoods. In this article we report results of a 3‐year, fully factorial experimental study exploring how warming, snow addition, and their combination affect reproductive phenology, effort, and success of four alpine plant species belonging to three different life forms in a semiarid, alpine meadow ecosystem on the central Tibetan Plateau. Our results indicate that warming and snow addition change reproductive phenology and success, but responses are not uniform across species. Moreover, traits associated with resource acquisition, such as rooting depth and life history (early vs. late flowering), mediate plant phenology, and reproductive responses to changing climatic conditions. Specifically, we found that warming delayed the reproductive phenology and decreased number of inflorescences of Kobresia pygmaea C. B. Clarke, a shallow‐rooted, early‐flowering plant, which may be mainly constrained by upper‐soil moisture availability. Because K. pygmaea is the dominant species in the alpine meadow ecosystem, these results may have important implications for ecosystem dynamics and for pastoralists and wildlife in the region.  相似文献   

10.
The improvement for drought tolerance requires understanding of the genetic control of wheat (Triticum aestivum L.) reaction to drought. In this study, a set of 131 recombinant inbred lines of wheat were investigated under well-watered (WW) and drought stress (DS) environments across 2 years to map quantitative trait loci (QTLs) for yield and physiological traits. A total of 225 QTLs were detected, including 32 non-environment-specific loci that were significant in both DS and WW, one drought-specific locus and two watering-specific loci. Three consistently-expressed QTLs (QTkw-3A.2, QTss-1A, and QScn-7A.1) were identified in at least three environments and the QTkw-1D.1 was significant in DS across the 2 years. By unconditional and conditional QTL analysis, spike number per plant and kernel number per spike were more important than thousand-kernel weight for grain yield (GY) at the given genetic background. Meta-analysis identified 67 meta-QTLs that contained QTLs for at least two traits. High frequency co-location of QTLs was found among either the spike-related traits or the six physiological traits. Four photosynthesis traits (CHL, LWUE, P N, and C i) were co-located with GY and/or yield components on various MQTLs. The results provided QTLs that warrant further study for drought tolerance breeding and are helpful for understanding the genetic basis of drought tolerance and the genetic contribution of yield components to GY at individual QTL level in wheat.  相似文献   

11.
甘蓝型油菜种子发芽率QTL定位及相关生理性状   总被引:2,自引:0,他引:2  
马爱芬  王雯  李加纳  谌利  王家丰  刘列钊 《遗传》2009,31(2):206-212
利用GH06×P174组合衍生的183个重组自交系进行种子发芽率遗传分析及种子发芽期间种子生理性状分析。用复合区间作图法对在室温下保存两年的种子(STY)、保存1年的种子(SOY)与新收获种子(FS)发芽率进行QTL定位。另外对保存两年的种子及新收获的种子萌发期间脂肪酶活性、电导率、还原糖含量、总糖含量及根系活力进行了测定, 并对结果进行分析。结果表明3批种子的发芽率QTL位点各不相同, 保存两年的种子在第9、14、17条连锁群上分别检测到1个位点, 保存1年的种子在第5、9条连锁群上各检测到1个位点, 新收获的种子在第4、18条连锁群上分别测检到1个位点。研究发现, 3批种子的发芽率相关性不显著, 发芽率差异达到极显著水平, 同时保存不同年份种子的发芽率QTL各不相同, 这表明甘蓝型油菜发芽率受很多不同因素所控制。保存两年及新收获种子的发芽率与电导率之间的相关性均达到极显著负相关, 表明可以通过电导率的测定估测发芽率, 电导率的研究对种子发芽率的研究具有重要意义。  相似文献   

12.
When workers of the thelytokous Cape honeybee, Apis mellifera capensis, come into contact with colonies of the neighboring arrhenotokous subspecies Apis mellifera scutellata, they can become lethal social parasites. We examined the inheritance of 3 traits (number of ovarioles, number of basitarsal hairs, and size of spermatheca) that are thought to be associated with reproductive potential in A. m. capensis workers. To do so, we produced hybrid A. m. scutellata/A. m. capensis queens and backcrossed them to either A. m. capensis or A. m. scutellata drones. We then measured the 3 traits in parental, hybrid, and backcross offspring. We show that the 3 traits are phenotypically correlated. We also show that the expression of ovariole number, basitarsal hairs, and size of spermatheca is influenced by the genotype of the individual and the rearing environment but that the influence of the rearing environment is less important to the number of ovarioles. We hypothesize a single recessive allele (l), present at high frequency in natural A. m. capensis populations, which when homozygous causes larvae to elicit more food. This increased feeding as larvae causes resulting adult workers to develop more queen-like morphology and increased reproductive potential. The number of ovarioles, in contrast, appears to be under independent genetic control.  相似文献   

13.
In plant ecophysiology, functional leaf traits are generally not assessed in relation to phenological phase of the canopy. Leaf traits measured in deciduous perennial species are known to vary between spring and summer seasons, but there is a knowledge gap relating to the late-summer phase marked by growth cessation and bud set occurring well before fall leaf senescence. The effects of phenology on canopy physiology were tested using a common garden of over 2,000 black cottonwood (Populus trichocarpa) individuals originating from a wide geographical range (44–60ºN). Annual phenological events and 12 leaf-based functional trait measurements were collected spanning the entire summer season prior to, and following, bud set. Patterns of seasonal trait change emerged by synchronizing trees using their date of bud set. In particular, photosynthetic, mass, and N-based traits increased substantially following bud set. Most traits were significantly different between pre-bud set and post-bud set phase trees, with many traits showing at least 25 % alteration in mean value. Post-bud set, both the significance and direction of trait–trait relationships could be modified, with many relating directly to changes in leaf mass. In Populus, these dynamics in leaf traits throughout the summer season reflected a shift in whole plant physiology, but occurred long before the onset of leaf senescence. The marked shifts in measured trait values following bud set underscores the necessity to include phenology in trait-based ecological studies or large-scale phenotyping efforts, both at the local level and larger geographical scale.  相似文献   

14.
An (Awassi × Merino) × Merino backcross family of 172 ewes was used to map quantitative trait loci (QTL) for different milk production traits on a framework map of 200 loci across all autosomes. From five previously proposed mathematical models describing lactation curves, the Wood model was considered the most appropriate due to its simplicity and its ability to determine ovine lactation curve characteristics. Derived milk traits for milk, fat, protein and lactose yield, as well as percentage composition and somatic cell score were used for single and two-QTL approaches using maximum likelihood estimation and regression analysis. A total of 15 significant (P < 0.01) and additional 25 suggestive (P < 0.05) QTL were detected across both single QTL methods and all traits. In preparation of a meta-analysis, all QTL results were compared with a meta-assembly of QTL for milk production traits in dairy ewes from various public domain sources and can be found on the ReproGen ovine gbrowser http://crcidp.vetsci.usyd.edu.au/cgi-bin/gbrowse/oaries_genome/. Many of the QTL for milk production traits have been reported on chromosomes 1, 3, 6, 16 and 20. Those on chromosomes 3 and 20 are in strong agreement with the results reported here. In addition, novel QTL were found on chromosomes 7, 8, 9, 14, 22 and 24. In a cross-species comparison, we extended the meta-assembly by comparing QTL regions of sheep and cattle, which provided strong evidence for synteny conservation of QTL regions for milk, fat, protein and somatic cell score data between cattle and sheep.  相似文献   

15.
研究巫山淫羊藿(Epimedium wushanense)3个种群的开花物候进程和生殖特征,分析了不同种群中的花部特征、开花物候指数和结实率差异,以及开花物候指数对巫山淫羊藿生殖成功的影响。结果表明:巫山淫羊藿花期为3月初到4月中下旬,种群开花一般历时22~27d;单株花期(花序)约12~17d;单花花期一般为3~4d。3个种群的个体水平的开花振幅曲线呈单峰型曲线,均具有较高的开花同步指数,表现出一种集中开花式样。相关分析表明:坐果数与开花高峰期、终花期、花期持续时间和花蕾数均呈极显著正相关,但坐果数与始花期无相关关系。开花物候变异系数分析表明:3个种群中花期持续时间、单花持续时间、终花期、开花高峰期和坐果数差异极显著;总花数、开花振幅和结实率差异显著;开花同步指数和始花期无显著差异性。3个种群中除同步性指数外,其余指数的变异系数均有差异,此外,巫山淫羊藿中结实率受到距的长短的影响。表明巫山淫羊藿的开花物候和生殖特征受到微环境的影响,同时生殖特征还受到花部特征距的影响。  相似文献   

16.
For discovering the quantitative trait loci (QTLs) contributing to early seedling growth and drought tolerance during germination, conditional and unconditional analyses of 12 traits of wheat seedlings: coleoptile length, seedling height, longest root length, root number, seedling fresh weight, stem and leaves fresh weight, root fresh weight, seedling dry weight, stem and leaves dry weight, root dry weight, root to shoot fresh weight ratio, root-to-shoot dry weight ratio, were conducted under two water conditions using two F8:9 recombinant inbred line (RIL) populations. The results of unconditional analysis are as follows: 88 QTLs accounting for 3.33–77.01% of the phenotypic variations were detected on chromosomes 1A, 1B, 1D, 2A, 2B, 2D, 3A, 3B, 4A, 4B, 4D, 5A, 5B, 5D, 6A, 6B, 6D, 7A, 7B and 7D. Among these QTLs, 19 were main-effect QTLs with a contribution rate greater than 10%. The results of the conditional QTL analysis of 12 traits under osmotic stress on normal water conditions were as follows: altogether 22 QTLs concerned with drought tolerance were detected on chromosomes 1B, 2A, 2B, 3B, 4A, 5D, 6A, 6D, 7B, and 7D. Of these QTLs, six were main-effect QTLs. These 22 QTLs were all special loci directly concerned with drought tolerance and most of them could not be detected by unconditional analysis. The finding of these QTLs has an important significance for fine-mapping technique, map-based cloning, and molecular marker-assisted selection of early seedling traits, such as growth and drought tolerance.  相似文献   

17.
李慢如  张玲 《生物多样性》2020,28(7):833-2627
桑寄生植物是一类自身可以进行光合作用的半寄生性灌木, 作为森林和林地的关键性资源可为鸟类等动物分类群提供重要的食物资源和巢址, 并影响当地的生物多样性。桑寄生植物隶属于檀香目, 包括5科88属约1,600种, 除极地、部分高寒和干旱沙漠地区外均有分布。桑寄生植物繁殖物候的研究对于了解“寄主植物-桑寄生植物-传粉/种子散布者系统”中物种相互作用网络的维持机制、生态系统结构的稳定性具有重要意义。本文综述了桑寄生植物在景观、群落和种群尺度上繁殖物候的表现类型, 发现桑寄生植物主要通过繁殖物候异步的方式延长物候期, 维持与传粉/种子散布者持久的互惠关系以保障自身种群的繁衍。该领域经过近年的发展, 已从单一地描述繁殖物候的表现类型到探究系统中寄主植物、传粉/种子散布者以及桑寄生植物自身生物学特性等因素的分析。通过前人的研究发现桑寄生植物繁殖物候对于该系统内相互作用的双方或多方有重要的适应意义, 今后首先应该对桑寄生植物的基础生物学背景进行研究, 然后还应加强实验验证, 进行多因素综合分析等来探讨桑寄生植物繁殖物候的生态学意义。  相似文献   

18.
水稻子粒硒含量的遗传及QTL检测   总被引:1,自引:0,他引:1  
富硒功能水稻具有富硒、优质、保健、防病、安全等特点,已成为当前研究的热点。子粒硒含量的QTL定位对研究富硒功能水稻的遗传育种具有重要的意义。以籼稻亲本奉新红米和明恢100杂交的145个株系的F2群体构建遗传连锁图谱,图谱拟合92个SSR标记位点,覆盖水稻基因组2187.5 cM,标记间平均遗传距离为23.7 cM,占水稻全基因组的49.2%。采用复合区间作图法,对水稻子粒硒含量进行QTL分析,在第5染色体上共检测到2个新的水稻子粒硒的QTL,对表型变异的贡献率分别为6.39%、8.01%。  相似文献   

19.
Agricultural environments deteriorate due to excess nitrogen application.Breeding for low nitrogen responsive genotypes can reduce soil nitrogen input.Rice genotypes respond variably to soil available nitrogen.The present study attempted quantification of genotype x nitrogen level interaction and mapping of quantitative trait loci (QTLs) associated with nitrogen use efficiency (NUE) and other associated agronomic traits.Twelve parameters were observed across a set of 82 double haploid (DH) lines derived from IR64/Azucena.Three nitrogen regimes namely,native (0 kg/ha; no nitrogen applied),optimum (100 kg/ha) and high (200 kg/ha) replicated thrice were the environments.The parents and DH lines were significantly varying for all traits under different nitrogen regimes.All traits except plant height recorded significant genotype x environment interaction.Individual plant yield was positively correlated with nitrogen use efficiency and nitrogen uptake.Sixteen QTLs were detected by composite interval mapping.Eleven QTLs showed significant QTL x environment interactions.On chromosome 3,seven QTLs were detected associated with nitrogen use,plant yield and associated traits.A QTL region between markers RZ678,RZ574 and RZ284 was associated with nitrogen use and yield.This chromosomal region was enriched with expressed gene sequences of known key nitrogen assimilation genes.  相似文献   

20.
Previous studies have shown that a negative relationship exists between transpiration efficiency (TE) and carbon isotope discrimination (Delta) and between TE and specific leaf area (SLA) in Stylosanthes scabra. A glasshouse experiment was conducted to confirm these relationships in an F(2) population and to study the causal nature of these relationships through quantitative trait loci (QTL) analysis. One hundred and twenty F(2) genotypes from a cross between two genotypes within S. scabra were used. Three replications for each genotype were maintained through vegetative propagation. Water stress was imposed by maintaining plants at 40% of field capacity for about 45 d. To facilitate QTL analysis, a genetic linkage map consisting of 151 RAPD markers was developed. Results from this study show that Delta was significantly and negatively correlated with TE and biomass production. Similarly, SLA showed significant negative correlation with TE and biomass production. Most of the QTL for TE and Delta were present on linkage groups 5 and 11. Similarly, QTL for SLA, transpiration and biomass productivity traits were clustered on linkage groups 13 and 24. One unlinked marker was also associated with these traits. There were several markers coincident between different traits. At all the coincident QTL, the direction of QTL effects was consistent with phenotypic data. At the coincident markers between TE and Delta, high alleles of TE were associated with low alleles of Delta. Similarly, low alleles of SLA were associated with high alleles of biomass productivity traits and transpiration. At the coincident markers between trans-4-hydroxy-N:-methyl proline (MHP) and relative water content (RWC), low alleles of MHP were associated with high alleles of RWC. This study suggests the causal nature of the relationship between TE and Delta. Phenotypic data and QTL data show that SLA was more closely associated with biomass production than with TE. This study also shows that a cause-effect relationship may exist between SLA and biomass production.  相似文献   

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