Sequence Analysis of the Genome of Carnation (Dianthus caryophyllus L.)

The whole-genome sequence of carnation (Dianthus caryophyllus L.) cv. ‘Francesco’ was determined using a combination of different new-generation multiplex sequencing platforms. The total length of the non-redundant sequences was 568 887 315 bp, consisting of 45 088 scaffolds, which covered 91% of the 622 Mb carnation genome estimated by k-mer analysis. The N50 values of contigs and scaffolds were 16 644 bp and 60 737 bp, respectively, and the longest scaffold was 1 287 144 bp. The average GC content of the contig sequences was 36%. A total of 1050, 13, 92 and 143 genes for tRNAs, rRNAs, snoRNA and miRNA, respectively, were identified in the assembled genomic sequences. For protein-encoding genes, 43 266 complete and partial gene structures excluding those in transposable elements were deduced. Gene coverage was ∼98%, as deduced from the coverage of the core eukaryotic genes. Intensive characterization of the assigned carnation genes and comparison with those of other plant species revealed characteristic features of the carnation genome. The results of this study will serve as a valuable resource for fundamental and applied research of carnation, especially for breeding new carnation varieties. Further information on the genomic sequences is available at http://carnation.kazusa.or.jp.     

香石竹开花结实生物学研究

通过田间观察,运用TTC法、联苯胺-过氧化氢法、杂交指数、花粉-胚珠比和套袋实验等方法,对香石竹的开花状态及繁育系统进行了研究。结果表明:在人工栽培条件下,香石竹种群可周年开花,单株花期35～61d,单花花期9～15d;花粉在开花第1～5天具有活力,柱头在开花第4～12天具可授性,第8～11天可授性最强;杂交指数为5,P/O值为307.84～790.52,结合坐果率结果,判断其繁育系统属于异交,部分自交亲和,需要传粉者。     

Mitochondrial Changes in Harvested Carnation Flowers (Dianthus caryophyllus L.) during Senescence

Harvested carnation (Dianthus caryophyllus L.) flowers wereplaced in either a preservative solution or deionized waterand monitored through senescence during which time flower freshweight was measured as well as production of ethylene and CO₂.Flower fresh weight, ethylene, and CO₂ levels increased as theflowers aged, but fresh weight and CO₂ levels fell once flowersbegan to senesce regardless of holding solution. Preservative-treatedflowers senesced at a slower rate than deionized water-treatedflowers. The amount of ADP phosphorylated to ATP per oxygenatom consumed, using mitochondria isolated from petal tissueprovided with either succinate or malate as substrates, wasfound to increase as flowers senesced and then to decrease inthe later stages of senescence. Respiratory control ratios withsuccinate as the substrate did not change appreciably untilthe final stages of senescence white respiratory control valuesusing malate showed greater variation but no consistent patternrelative to the progress of senescence. Cyanide-resistant respirationwas noted with isolated mitochondria oxidizing either substrate,but no correlation between cyanide-resistant respiration andsenescence could be found. (Received July 10, 1984; Accepted April 16, 1985)     

香石竹种质离体保存研究进展

香石竹是世界四大切花之一,具有重要的观赏价值。其种质资源主要依靠田间种质圃和离体库进行保存。离体保存包括试管苗保存和超低温保存,这两种方法作为田间种质圃保存的补充可以分别对种质资源进行短中期和长期保存。本文对香石竹离体保存的相关研究进行了概括总结,旨在为香石竹种质资源的保存提供参考。     

First Report of Fusarium proliferatum Infecting Carnation (Dianthus caryophyllus L.) in China

In 2011, a wilt disease has been detected on carnation (Dianthus caryophyllus L.) cultivar ‘Light Pink Barbara’ in Kunming, Yunnan, China. A Fusarium sp. was consistently recovered from pieces of symptomatic tissues on Petri dishes containing potato dextrose agar (PDA). On the basis of morphological characteristics and molecular identification by DNA sequencing of ribosomal DNA internal transcribed spacer (rDNA ITS) and partial translation elongation factor‐1α (TEF) gene region, following their phylogenetic trees construction, the putative causal agent was identified as Fusarium proliferatum (Matsushima) Nirenberg, and its pathogenicity was finally confirmed by Koch's postulates. To our knowledge, this is the first report of a wilt disease caused by F. proliferatum on carnation in China.     

Endoglycanase-Catalyzed Degradation of Hemicelluloses during Development of Carnation (Dianthus caryophyllus L.) Petals

Large molecular-size hemicelluloses, including xyloglucan, decreased in quantity during development of carnation (Dianthus caryophyllus L. cv White Sim) petals, along with a relative increase in polymers with an average size of 10 kilodaltons. An enzyme extract from senescing petal tissue depolymerized the large molecular-size hemicelluloses in a pattern similar to that occurring in vivo during petal development. The products generated in vitro were composed of polymeric and monomeric components, the latter consisting primarily of xylose, galactose, and glucose. The 10 kilodalton hemicelluloses were resistant to in vitro enzymic hydrolysis. Glycosyl-linkage composition of the large molecular-size polymers provided evidence for the presence of xyloglucan with smaller amounts of arabinoxylan and arabinan. The 10 kilodalton polymers were enriched in mannosyl and 4-linked glucosyl residues, presumably derived from glucomannan. During petal development or enzymic hydrolysis, no change was observed in the relative glycosyl-linkage composition of the large molecular-size hemicelluloses. The in vitro activity of carnation petal enzymes active toward native hemicelluloses increased threefold at the onset of senescence and declined slightly thereafter. Gel chromatography revealed 23 and 12 kilodalton proteins with hemicellulase activity. The enzymes hydrolyzed the large molecular-size hemicelluloses extensively and without formation of monomers. Endoxylanase activity was detected in the partially purified enzyme preparation. Xyloglucan was depolymerized in the absence of cellulase activity, suggesting the presence of a xyloglucan-specific glucanase. These data indicate that the hemicellulose molecular-size changes observed during development of carnation petals are due, in part, to the enzymic depolymerization of large molecular-size hemicelluloses.     

6-苄基腺嘌呤和激动素对香石竹切花衰老的生理效应

6-苄基腺嘌呤（6-BA）和激动素（KT）均能改善香石竹切花体内的水分平衡,增加切花的鲜重,增大花径,提高过氧化物酶（POD）活性,延缓可溶性蛋白质含量下降以及丙二醛（MDA）含量和O2^-·于生成速率的增加,延长切花瓶插寿命2～3d。     

溴代十六烷基吡啶对香石竹切花的保鲜效应

研究切花瓶插液中加入0．3g．L^-1季铵盐化合物溴代十六烷基吡啶（CPB）后,瓶插液中微生物密度和切花茎杆基部病原菌分离频率下降,切花后期的水分平衡和鲜重能较好地维持,花冠直径增大,观赏寿命延长。     

Shoot Regeneration from Fragmented Flower Buds of Carnation (Dianthus caryophyllus)

Adventitious shoots were regenerated from fragmented flowerbuds, individual petals and receptacles in a number of differentcarnation cultivars. The major site of shoot formation was thesubepidermal cells at the proximal end of the petals. The yieldof shoots from a single flower bud was high, ranging between70 and 275, for the 11 cultivars tested. The regeneration mediumcontained Murashige and Skoog basal medium supplemented with4–8 µm -naphthaleneacetic acid and 4–8 µmbenzyladenine. The preferred regeneration protocol appears highlysuited to the development of gene transfer systems. Adventitious shoots, Dianthus caryophyllus L., tissue culture, explant, auxin, cytokinin, cut flowers, floriculture, organogenesis     

Somatic embryogenesis in cell suspension culture of carnation (Dianthus caryophyllus L.)

Somatic embryogenesis and plantlet formation were obtained from 60–75 day old cell cultures of carnation. Callus was generated on MS basal medium supplemented with 2,4-dichchlorophenoxy acetic acid (2,4-D). Removal of 2,4-D during subsequent subculturing of cell suspensions resulted in formation of embroids. These somatic embryos originated from single cells and their early development proceeded normally with clearly defined apical and root meristems. Some embryos developed into plants and were acclimatized to ex vitro conditions.Abbreviations BAP 6-benzylaminopurine - Kinetin 6-furfurylamino purine - 2,4-D 2,4-dichlorophenoxy acetic acid - MS Murashige and Skoog     

Plant regeneration from stem and petal of carnation (Dianthus caryophyllus L.)

Plants were regenerated via adventitious shoot initiation from petal explants of carnation (Dianthus caryophyllus L.) cultivars Crowley Sim, Ember Rose, Orchid Beauty, Red Sim, White Sim and from stem segments of Crowley Sim, Red Sim, White Sim. Differences in cultivar response were observed, with White Sim being the most responsive for both explant types. Plants were also regenerated from receptacles of this cultivar. The effect of different cytokinins on regeneration from petal and stem explants of cultivar White Sim was compared. Thidiazuron was more effective than 6-benzylaminopurine or kinetin. In stem explants, morphogenic capacity was determined by the developmental stage of the explant. Highest percentage of shoot formation was observed in the youngest stem segments, on all the cytokinins tested. Stem-derived plants grew faster than petal or receptacle-derived plants and produced normal, flowering plants eight to ten months after culture.     

Biochemical characteristics ofS-adenosylmethionine decarboxylase from carnation (Dianthus caryophyllus L.) petals

We have partially purified S-adenosylmethionine decarboxylase (EC 4.1.1.50, SAMDC) from carnation (Dianthus caryophyllus L.) petals and generated polyclonal antibodies against CSDC 16 protein (Leeet al., 1996) overexpressed inE. coli. The protein has been purified approximately 126.8 fold through the steps involving ammonium sulfate fractionation, DEAE-Sepharose column chromatography and Sephacryl S-300 gel filtration. Its molecular mass was 42 kDa in native form and we could also detect a band of 32 kDa molecular mass on SDS-PAGE in western blot analysis using the polyclonal antibodies. The Km value of this enzyme forS-adenosylmethionine was 26.3 μM. The optimum temperature and pH forS-adenosylmethionine decarboxylase activity were 35°C and pH 8.0, respectively. Putrescine and Mg²⁺ had no effects on the activation of the enzyme activity. Mg²⁺ did not have any significant effects on the enzyme activity. SAMDC activity was inhibited by putrescine, spermidine and spermine. Methylglyoxal bis-(guanylhydrazone) (MGBG), carbonyl reagents such as hydroxylamine and phenylhydrazine, and sulfhydryl reagent such as 5,5′dithio-bis (2-nitrobenzoic acid) (DTNB) were effective inhibitors of the enzyme. However, isonicotinic acid hydrazide known as an inhibitor of 5′-pyridoxal phosphate (PLP) dependent enzyme activity had no significant effect on the enzyme activity. These results and our previously reported results (Leeet al., 1997b) suggest thatS-adenosylmethionine decarboxylase is a heterodimer, αβ, and some carbonyl group and sulfhydryl group are involved in the catalytic activity.     

Somatic embryogenesis in cell suspension culture of carnation (Dianthus caryophyllus L.)

Somatic embryogenesis and plantlet formation were obtained from 60–75 day old cell cultures of carnation. Callus was generated on MS basal medium supplemented with 2,4-dichchlorophenoxy acetic acid (2,4-D). Removal of 2,4-D during subsequent subculturing of cell suspensions resulted in formation of embroids. These somatic embryos originated from single cells and their early development proceeded normally with clearly defined apical and root meristems. Some embryos developed into plants and were acclimatized to ex vitro conditions.     

Direct somatic embryogenesis and plant regeneration of carnation (Dianthus caryophyllus L.)

Conditions for efficient direct somatic embryogenesis and plant regeneration of leaf explants from carnation cultivars Lena (SIM group) and Bulgarian spray cultivars Nasslada, Yanita, Regina and Line 84 were established. Murashige and Skoog (MS) liquid medium supplemented with 1 mg/l 2,4-dichlorophenoxyacetic acid and 0.2 mg/l 6-benzylaminopurine was used for direct induction of embryoids without an additional callus phase. The first globular structures were observed after 20 days of cultivation. Their further development to the torpedo stage was correlated with the presence of polyethylene glycol (PEG 6000). Somatic embryo maturation was promoted by casein hydrolysate (1000 mg/l) in MS liquid media. The percentage conversion of embryos and polyembryos to whole plants varied between 10 and 75% among studied cultivars. Plantlets regenerated by this procedure were morphologically identical to the donor material and developed normally in a greenhouse. Received: 29 November 1996 / Revision received: 28 April 1997 / Accepted: 28 May 1998     

Adventitious Shoot Regeneration in Carnation (Dianthus caryophyllus) from Axillary Bud Explants

Adventitious shoots were regenerated from axillary bud explantsof 15 carnation cultivars. The use of leaf and stem explantswas not successful, largely due to explant senescence in thepresence of benzyladenine, kinetin and, to a lesser extent,zeatin. For axillary bud explants, a suitable optimum adventitiousregeneration medium contained Murashige and Skoog basal mediumsolidified with Gelrite and supplemented with 15 µm benzyladenineand 0.5 µM a-napthaleneacetic acid. Adventitious primordiaarose from the cut basal end of bud explants erupting as individualshoots after 2–3 weeks incubation. The axillary bud sizeand the time between subcultures of source material influencedthe production of adventitious shoots. Transfer of regeneratedshoots onto a medium solidified with agar minimized visiblesigns of vitrification. Regenerated shoots could be easily rooted,transferred to glasshouse conditions and grown to flowering. Vitrification, tissue culture, cut flowers, Dianthus caryophyllus L., carnation, cytokinins, explant     

Role of the gynoecium in natural senescence of carnation (Dianthus caryophyllus L.) flowers

Although the role of the gynoecium in natural senescence of the carnation flower has long been suggested, it has remained a matter of dispute because petal senescence in the cut carnation flower was not delayed by the removal of gynoecium. In this study, the gynoecium was snapped off by hand, in contrast to previous investigations where removal was achieved by forceps or scissors. The removal of the gynoecium by hand prevented the onset of ethylene production and prolonged the vase life of the flower, demonstrating a decisive role of the gynoecium in controlling natural senescence of the carnation flower. Abscisic acid (ABA) and indole-3-acetic acid (IAA), which induced ethylene production and accelerated petal senescence in carnation flowers, did not stimulate ethylene production in the flowers with gynoecia removed (-Gyn flowers). Application of 1-aminocyclopropane-1-carboxylate (ACC), the ethylene precursor, induced substantial ethylene production and petal wilting in the flowers with gynoecia left intact, but was less effective at stimulating ethylene production in the -Gyn flowers and negligible petal in-rolling was observed. Exogenous ethylene induced autocatalytic production of the gas and petal wilting in the -Gyn flowers. These results indicated that ethylene generated in the gynoecium triggers the onset of ethylene production in the petals of carnation during natural senescence.     

Controlling hyperhydration of carnations (Dianthus caryophyllus L.) grown in a mist reactor

Carnations (Dianthus caryophyllus L.) grown in vitro often develop physiological abnormalities such as hyperhydration. The amount of hyperhydration and growth was compared between carnations grown in mist reactors and conventional semisolid micropropagation systems (vented or unvented GA7 culture boxes). Plants grown in the mist reactor with long misting times (10 min h(-1)) produced more dry mass than those grown with <10 min h(-1); however, more misting also produced more hyperhydrated plants (70% hyperhydration). Control of hyperhydration in the mist reactor involved either reducing the overall nutrient mist supply or altering the mist supply throughout the culturing period. Stepped decreases in the mist supply throughout the 3-week period or an overall decrease in the duration of misting reduced hyperhydration to 13% and 5%, respectively. However, for both misting regimes, the biomass of normal (healthy) plants (fresh and dry weights) was limited. Further analysis suggested that, although normal plant biomass increased with longer mist exposure, hyperhydration levels also increased while the water content, based on percent dry weight, approached that of hyperhydrated plants. Sufficient normal plant development (fresh weight, leaf and shoot numbers, height, and rooting) with < 50% hyperhydration was obtained by weekly, stepped increases in the nutrient mist supply.     

Differentiation Between Tissues from Carnation (Dianthus caryophyllus) Stems by Pyrolysis-Mass Spectrometry

Small pieces of different tissues from stems of young and oldcarnation plants were analyzed for lignification (lignin/celluloseratios) and lignin composition by means of pyrolysis-(gas chromatography)-massspectrometry. The epidermis and phloem of young and old stemswere essentially non-lignified. Pith parenchyma was only lignifiedin mature and senescing tissues. The type of lignin in sclerenchymadiffered from that in xylem and pith. Lignification in the xylemof very young tissues was a mainly guaiacyl-type lignin, whichgradually changed into a mixed guaiacyl-syringyl lignin in oldertissues. In mature tissues, the sclerenchyma was more highlylignified than the xylem. All tissues yielded comparatively large amounts of dihydroferulicacid, a compound which may be specific for carnation. Carnation, Dianthus caryophyllus, epidermis, cortex, sclerenchyma, phloem, xylem, pith, lignification, aging, dihydroferulic acid, pyrolysis-(gas chromatography)-mass spectrometry