Disentangling the relative effects of environmental versus human factors on the abundance of native and alien plant species in Mediterranean sandy shores

Aim Mediterranean coastal sand dunes are characterized by both very stressful environmental conditions and intense human pressure. This work aims to separate the relative contributions of environmental and human factors in determining the presence/abundance of native and alien plant species in such an extreme environment at a regional scale. Location 250 km of the Italian Tyrrhenian coast (Region Lazio). Methods We analysed alien and native plant richness and fitted generalized additive models in a multimodel‐inference framework with comprehensive randomizations to evaluate the relative contribution of environmental and human correlates in explaining the observed patterns. Results Native and alien richness are positively correlated, but different variables influence their spatial patterns. For natives, human population density is the most important factor and is negatively related to richness. Numbers of natives are unexpectedly lower in areas with a high proportion of natural land cover (probably attributable to local farming practices) and, to a lesser degree, affected by the movement of the coastline. On the other hand, alien species richness is strongly related to climatic factors, and more aliens are found in sectors with high rainfall. Secondarily, alien introductions appear to be related to recent urban sprawl and associated gardening. Main conclusions Well‐adapted native species in a fragile equilibrium with their natural environment are extremely sensitive to human‐driven modifications. On the contrary, for more generalist alien species, the availability of limited resources plays a predominant role.     

From richer to poorer: successful invasion by freshwater fishes depends on species richness of donor and recipient basins

Evidence for the theory of biotic resistance is equivocal, with experiments often finding a negative relationship between invasion success and native species richness, and large‐scale comparative studies finding a positive relationship. Biotic resistance derives from local species interactions, yet global and regional studies often analyze data at coarse spatial grains. In addition, differences in competitive environments across regions may confound tests of biotic resistance based solely on native species richness of the invaded community. Using global and regional data sets for fishes in river and stream reaches, we ask two questions: (1) does a negative relationship exist between native and non‐native species richness and (2) do non‐native species originate from higher diversity systems. A negative relationship between native and non‐native species richness in local assemblages was found at the global scale, while regional patterns revealed the opposite trend. At both spatial scales, however, nearly all non‐native species originated from river basins with higher native species richness than the basin of the invaded community. Together, these findings imply that coevolved ecological interactions in species‐rich systems inhibit establishment of generalist non‐native species from less diverse communities. Consideration of both the ecological and evolutionary aspects of community assembly is critical to understanding invasion patterns. Distinct evolutionary histories in different regions strongly influence invasion of intact communities that are relatively unimpacted by human actions, and may explain the conflicting relationship between native and non‐native species richness found at different spatial scales.     

Lake construction has facilitated calanoid copepod invasions in New Zealand

Aim We tested the hypothesis that construction of lakes and ponds has facilitated both inter‐ and intracontinental invasions of calanoid copepod species. Location North Island, New Zealand. Methods We sampled both natural and constructed lakes, ponds and reservoirs for calanoid copepods in the North Island, New Zealand. Species records were supplemented by examining historically collected samples and literature review. Distributions of non‐indigenous calanoid copepod species were compared between constructed and natural waters. Species distributions of native species were compared with the basement terranes (microplates) of the North Island to determine if they possess ‘natural ranges’, and to assess whether construction of new water bodies had altered these distributions. Results Ten calanoid copepod species have been recorded. At least four, and possibly five, of these species are non‐indigenous and were restricted to constructed water bodies. Occurrences in constructed water bodies were not restricted to dammed valleys, but also included ponds constructed on farms, ornamental ponds, disused quarries and retired mines. Four Boeckella species had distributions in natural waters closely related to the North Island basement terranes, and therefore possess ‘natural ranges’ on the island. One species, Boeckella propinqua, was found in natural lakes over a small geographical range only, but has spread with construction of new water bodies to now be widely distributed over the island. Main conclusions Construction of lakes and ponds has facilitated the invasion of calanoid copepod species at both inter‐ and intracontinental scales. Our findings suggest that resident native calanoid copepod species may reduce the risk of invasion to natural water bodies, as similar‐sized species are commonly unable to co‐occur. Spread of the non‐indigenous representatives from constructed into natural waters is inevitable, with established populations providing local propagule supplies for regular introductions.     

BIODIVERSITY RESEARCH: Native and introduced fish species richness in Mediterranean streams: the role of multiple landscape influences

Aim To examine the role of multiple landscape factors on the species richness patterns of native and introduced freshwater fish. Location Mediterranean streams, south‐western Iberian Peninsula, Europe (c. 87,000 km²). Methods We used a dataset of fish occurrences from 436 stream sites. We quantified the incremental explanatory power of multiple landscape factors in native, introduced, and overall local species richness using regression analysis. First, we related variation in local species richness across river basins to regional species richness (here, the basin species pool), area and factors of climate and topography. Second, we related within‐river basin local species richness to site’s climate and topography, and spatial structure derived from Principal Coordinates of Neighbour Matrices approach, after testing for species richness spatial autocorrelation; predicted local richness was mapped. Results Patterns of local species richness across river basins were strongly associated with regional species richness for overall, native and introduced species; annual rainfall showed a significant incremental contribution to variation in introduced species richness only. Within river basins, environmental factors were associated with local richness for the three species groups, though their contributions to the total explained variation were inferior to those of spatial factors; rainfall seasonality and stream slope were the most consistent environmental correlates for all species groups, while the influence of spatial factors was most prevalent for native species. Main conclusions Landscape factors operating among and within river basins seem to play a relevant role in shaping local species richness of both native and introduced species, and may be contingent on basin‐specific contexts. Nevertheless, local factors, such as habitat characteristics and biotic interactions and human‐induced disturbances may also be at play. Multiscale approaches incorporating a multitude of factors are strongly encouraged to facilitate a deeper understanding of the biodiversity patterns of Mediterranean streams, and to promote more effective conservation and management strategies.     

Species richness patterns of amphibians in southwestern Ontario ponds

Abstract. In southwestern Ontario amphibian species richness (α-diversity) was investigated at 180 ponds from 1992 to 1994. Patterns of species richness were compared among regions and the relationship between species richness and local habitat and regional landscape variables was investigated. Patterns of incidence differed among regions, with species that use woodlands being rare in one of the regions. Repeated measures analysis of variance indicated that species richness differed significantly among regions but not among sub-regions nested within regions. Species richness did not change significantly over time and there was no region by year effect. Species richness was highly correlated with local variables related to fish predation and to regional variables related to forest cover. Multiple regression indicated that a combination of local and regional variables best accounted for the variance in species richness, but the amount of regional woodlands was the single most important variable. The pattern of species richness can be explained by historical deforestation as the primary process.     

Higher temperatures enhance the effects of invasive sportfish on mountain zooplankton communities

1. Decades of introductions of exotic sportfish to mountain lakes around the world have impoverished them biologically, and this may be exacerbated by global warming. We assessed the current status of invasive salmonids and native zooplankton communities in 34 naturally fishless lakes along an elevational gradient, which served as an environmental proxy for the expected effects of climate change. 2. Our main goal was to explore how climate‐related variables influence the effects of stocked salmonids on the total biomass, species richness and taxonomic composition of zooplankton. We predicted that warmer conditions would dampen the negative predatory effects of exotic brook trout (Salvelinus fontinalis) on zooplankton communities because more temperate lakes contain a greater diversity of potentially tolerant species. 3. Instead, we discovered that the persistence of stocked brook trout in the warmer lakes significantly amplified total zooplankton biomass and species richness. In colder and deeper lakes, zooplankton were relatively unaffected by S. fontinalis, which however persisted better in alpine lakes than at lower elevations after stocking practices were halted over two decades ago. Warmer lake conditions and higher concentrations of dissolved organic carbon (DOC) were significant primary drivers of zooplankton species turnover, both favouring greater species diversity. 4. Our findings of an ecological surprise involving potential synergistic positive effects of climate warming and exotic trout on native zooplankton communities presents a conundrum for managers of certain national mountain parks. Present mandates to eradicate non‐native trout and return the mountain lakes to their naturally fishless state may conflict with efforts to conserve biodiversity under a rapidly changing climate.     

Patterns and gradients of diversity in South Patagonian ombrotrophic peat bogs

Many north‐hemispherical mires seemingly untouched by drainage and cultivation are influenced by a diffuse sum of man‐made environmental changes, such as atmospherical nitrogen deposition that mask general patterns in species richness and functional group responses along resource gradients. To obtain insights into natural diversity‐environment relationships, we studied the vegetation and the peat chemistry of pristine bog ecosystems in southern Patagonia along a west–east transect across the Andes. The studied bog ecosystems covered a floristic gradient from hyperoceanic blanket bogs dominated by cushion building vascular plants via a transitional mixed type to Sphagnum‐dominated raised bogs east of the mountain range. To test the influence of resource availability on diversity patterns, species richness and functional groups were related to environmental variables by calculating general regression models and generalized additive models. Species richness showed strong linear correlations to peat chemical features and the general regression model resulted in three major environmental variables (water level, total nitrogen, NH₄Cl soluble calcium), altogether explaining 76% of variance. Functional group response illustrated a clear separation along environmental gradients. Mosses dominated at the low end of a nitrogen gradient, whereas cushion plants had their optimum at intermediate levels, and graminoids dominated at high nitrogen contents. Further shifts were related to NH₄Cl soluble calcium and water level. The models documented partly non‐linear relationships between functional group response and trophical peat properties. Within the three bog types, the calculated models differed remarkably illustrating the scale‐dependency of the explanatory factors. Our findings confirmed several general patterns of species richness and functional shifts along resource gradients in a surprisingly clear way and underpin the significance of undisturbed peatlands as reference systems for testing of ecological theory and for conservation and ecological restoration in landscapes with strong human impact.     

The role of regional and local scale predictors for plant species richness in Mediterranean forests

Abstract

Both local and regional predictors play a role in determining plant community structure and composition. Climate, soil features as well as different local history and management affect forest understorey and tree species composition, but to date their specific role is relatively unknown. Few studies have addressed the importance of these predictors, especially in the Mediterranean area, where environmental conditions and human impacts have generated heterogeneous forest communities. In this study, the relationships between environmental variables and species richness of different groups of vascular plants (vascular species, woody species and open habitat species) and bryophytes were investigated in Tuscan forests. A total of 37 environmental variables were used by generalised linear model fitting in order to find parsimonious sub-sets of environmental factors (predictors) that are able to explain species diversity patterns at the local scale. Moreover, the role of regional and local variable groups on species richness of the considered plant groups was estimated by using the variance partitioning approach. We found that local variables, such as forest management and structure, explained more variance than regional variables for total species richness, open habitat species richness and bryophyte species richness. On the other hand, regional variables (such as elevation) played a central role for woody species richness.     

Does energy availability influence classical patterns of spatial variation in exotic species richness?

Aim At macroecological scales, exotic species richness is frequently positively correlated with human population density. Such patterns are typically thought to arise because high human densities are associated with increased introduction effort and/or habitat modification and disturbance. Exotic and native species richness are also frequently positively correlated, although the causal mechanisms remain unclear. Energy availability frequently explains much of the variation in species richness and we test whether such species–energy relationships may influence the relationships of exotic species richness with human population density and native species richness. Location Great Britain. Methods We first investigate how spatial variation in the distributions of the 10 exotic bird species is related to energy availability. We then model exotic species richness using native avian species richness, human population density and energy availability as predictors. Species richness is modelled using two sets of models: one assumes independent errors and the other takes spatial correlation into account. Results The probability of each exotic species occurring, in a 10‐km quadrat, increases with energy availability. Exotic species richness is positively correlated with energy availability, human population density and native species richness in univariate tests. When taking energy availability into account, exotic species richness is negligibly influenced by human population density, but remains positively associated with native species richness. Main conclusions We provide one of the few demonstrations that energy availability exerts a strong positive influence on exotic species richness. Within our data, the positive relationship between exotic species richness and human population density probably arises because both variables increase with energy availability, and may be independent of the influence of human density on the probability of establishment. Positive correlations between exotic and native species richness remain when controlling for the influence of energy on species richness. The relevance of such a finding to the debate on the relationship between diversity and invasibility is discussed.     

Low local but high beta diversity of tropical forest dung beetles in Madagascar

Aims We have compared local (alpha) and regional (beta) species diversities of dung beetles in wet forests in the main tropical regions including Madagascar. Madagascar is exceptional in lacking native large herbivorous mammals which produce the key resource for dung beetles elsewhere. Location Central and South America, mainland Africa, Madagascar and Southeast Asia. Methods Trapping data on dung beetles and data on mammalian faunas were obtained from published and unpublished studies. We used our original data for Madagascar. Results Species richness of dung beetles and that of large‐bodied (> 15 mm length) species in particular were highly significantly explained by the regional number of large‐bodied (> 10 kg) mammals (R² from 50 to 80%). For a given pairwise spatial distance between two communities, beta diversity was significantly higher in Madagascar than elsewhere, explaining the very high total species richness in Madagascar in spite of low local diversity. Main conclusion The presence and numbers of large herbivorous mammals greatly influence the species richness of dung beetles in tropical wet forests. The lack of native large herbivores rather than a limited species pool explains the low local diversity in Madagascar. Exceptionally high beta diversity in Madagascar suggests a pattern of old radiation involving extensive allopatric speciation.     

Freshwater fish introductions in mediterranean‐climate regions: are there commonalities in the conservation problem?

Aim To compare patterns and drivers of freshwater fish introductions across five climatically similar regions and evaluate similarities and differences in the non‐native species introduced. Location Five mediterranean‐climate regions: California (USA), central Chile, south‐western Australia, the Iberian peninsula (Spain and Portugal) and the south‐western Cape (South Africa). Methods Species presence–absence for native and non‐native fishes were collated across the regions, and patterns of faunal change were examined using univariate and multivariate statistical approaches. Taxonomic patterns in freshwater fish introductions were evaluated by comparing the number of species introduced by order to the numbers expected from binomial probabilities. Factors influencing multiple introductions of freshwater fish species in mediterranean regions were determined using generalized linear modelling. Results High levels of endemism (70–90%) were revealed for south‐western Cape, south‐western Australia and Chile. Despite their high rates of endemism, all regions currently have more non‐native species than endemic species. Taxonomic selection was found for five orders, although this was only significant for Salmoniformes across regions. The average increase in regional compositional similarity of fish faunas resulting from non‐native fish introductions was 8.0%. Important factors predicting multiple introductions of a species include previous introduction success and mean latitude of its distribution Main conclusions The mediterranean‐climate regions of the world, separated by vast distances, originally had a few fish species in common but are now more similar, owing to species introductions, illustrating the extent and importance of taxonomic homogenization. Introductions are largely driven by taxonomically biased human interests in recreational fisheries, aquaculture and ornamental pet species.     

Fish diversity in European lakes: geographical factors dominate over anthropogenic pressures

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Predicting introduction, establishment and potential impacts of smallmouth bass

Aim The introduction of non‐indigenous species has resulted in wide‐ranging ecological and economic impacts. Predictive modelling of the introduction and establishment of non‐indigenous species is imperative to identify areas at high risk of invasion to effectively manage non‐indigenous species and conserve native populations. Smallmouth bass (Micropterus dolomieu), a warm water fish species native to central North America has negatively impacted native fish communities, including cyprinids and salmonid populations, as a result of intentional introductions. We predicted the introduction risk; species establishment based on habitat suitability; identified lakes at high risk of invasion; and finally assessed the consequential impacts on native salmon, trout and cyprinid populations. Location Ontario and British Columbia, Canada. Methods Classification tree and logistic regression models were developed and validated to predict the introduction and establishment of smallmouth bass for thousands of lakes. Results Densely human populated areas and larger lake surface areas successfully identify lakes associated with the introduction of smallmouth bass (introduction model) in British Columbia. Climate, lake morphology and water chemistry variables were the driving environmental parameters to define suitable smallmouth bass habitat (establishment model). A combination of the introduction and establishment model identified 138 lakes that are currently at risk in British Columbia to the introduction and establishment of smallmouth bass. Of these 138 high‐risk lakes, 95% of them contain at least one species of salmon, trout or cyprinid, thereby increasing the potential impact of an invasion by smallmouth bass. Main conclusions Our framework can be applied to other terrestrial and aquatic species to obtain a better understanding of the potential risk posed by a non‐indigenous species to an ecosystem. Furthermore, our methodology can be used to focus management efforts on areas at higher risk (e.g. number of potential releases, more favourable habitats) to control future introductions of non‐indigenous species, thereby conserving native populations.     

Connectivity and cladoceran species richness in a metacommunity of shallow lakes

SUMMARY 1. The shallow ponds of the nature reserve 'De Maten' form a metacommunity, in which individual ponds are highly interconnected via a system of overflows and rivulets. This study reports on the relations between cladoceran species richness and (a) connectivity patterns and (b) local environmental variables.
2. No relation was found between local species richness and three connectivity variables or dispersal pathways.
3. Spatial configuration was related to richness, but was confounded by environmental variables for 2 of 3 years. In those 2 years, there was a significant linear relation between Secchi disc depth and species richness, suggesting an important impact of the clearwater/turbid state alternative equilibria in shallow lakes in determining cladoceran richness. Only in the year in which environmental variables were unimportant did connectivity between the ponds influence species richness.
4. These results suggest that local environmental variables related to the clearwater/turbid state alternative equilibria in shallow lakes are important in determining cladoceran species richness. Connectivity and dispersal of individuals between the different ponds only act secondarily by increasing the general species richness within a pond through dispersal from ponds with different environmental conditions.     

The history of the minnow Phoxinus phoxinus (L.) in Norway: from harmless species to pest

The causes, effects and extent of minnow Phoxinus phoxinus introductions in Norway are reviewed to assess why the introductions have had severe effects, especially where brown trout Salmo trutta is the only fish species present. The natural distribution of minnow in Norway was mainly restricted to low altitude localities in the south-eastern part of the country and in some northern areas. The distribution area expanded considerably throughout the 1900s, especially in mountain areas, due in part to the use of minnows as live bait for angling. Although minnow densities do not seem unusually high in the relatively complex fish communities of its native range, the species can achieve very high population densities when introduced to communities with few fish species, such as in the numerous recently invaded lakes where brown trout was the only fish species present. The dense minnow populations in these lakes appear to have led to reduced recruitment and growth rates in the brown trout, with abundances on average 35% lower in lakes where minnow has been introduced. The success of minnow in harsh habitats demonstrates their phenotypic and ecological plasticity, but also implies that their original distribution in Norway was restricted by early immigration history and not by environmental limitations. This suggests that human-assisted spread of the species could have strong adverse effects in Scandinavia lakes of low fish species richness.     

Plant community composition and species richness in the High Arctic tundra: From the present to the future

Arctic plant communities are altered by climate changes. The magnitude of these alterations depends on whether species distributions are determined by macroclimatic conditions, by factors related to local topography, or by biotic interactions. Our current understanding of the relative importance of these conditions is limited due to the scarcity of studies, especially in the High Arctic. We investigated variations in vascular plant community composition and species richness based on 288 plots distributed on three sites along a coast‐inland gradient in Northeast Greenland using a stratified random design. We used an information theoretic approach to determine whether variations in species richness were best explained by macroclimate, by factors related to local topography (including soil water) or by plant‐plant interactions. Latent variable models were used to explain patterns in plant community composition. Species richness was mainly determined by variations in soil water content, which explained 35% of the variation, and to a minor degree by other variables related to topography. Species richness was not directly related to macroclimate. Latent variable models showed that 23.0% of the variation in community composition was explained by variables related to topography, while distance to the inland ice explained an additional 6.4 %. This indicates that some species are associated with environmental conditions found in only some parts of the coast–inland gradient. Inclusion of macroclimatic variation increased the model's explanatory power by 4.2%. Our results suggest that the main impact of climate changes in the High Arctic will be mediated by their influence on local soil water conditions. Increasing temperatures are likely to cause higher evaporation rates and alter the distribution of late‐melting snow patches. This will have little impact on landscape‐scale diversity if plants are able to redistribute locally to remain in areas with sufficient soil water.     

Diversity at hydrothermal vents

Aim To describe patterns of hydrothermal vent community diversity and dispersion at the intersegment scale (> 100 km). Location The area discussed is an approximately 170 km portion of the Juan de Fuca Ridge, a mid‐ocean ridge in the north‐east Pacific Ocean. Methods Samples of benthic invertebrates from hydrothermal vents on three segments of the Juan de Fuca are examined for community characteristics such as diversity, abundance and distribution. Results Species richness (55 species) and evenness are low. If the macrofauna only are considered, species richness is about 30% lower than when meiofauna are also considered. The geometric series describes the species‐abundance distribution. The relationship between vent species’ distribution and abundance is significantly positive (r² = 0.818; P < 0.001). Alpha diversity is lower in patchy habitat than continuous habitat and gamma diversity is similar for both habitat types. Beta diversity is higher in patchy habitat. Local diversity is linearly related to regional diversity. Main conclusions Species richness is comparable to other highly disturbed systems. The geometric series species abundance model implies some degree of niche pre‐emption in the vent community and is consistent with the suggestion that the geometric series distribution can be found in species‐poor environments that experience harsh conditions and are structured by relatively few environmental factors. Species distribution and abundance are highly correlated. The regional species pool affects local vent diversity. Vent diversity studies should be conducted on at least the ridge scale.     

The river domain: why are there more species halfway up the river?

Biologists have long noted higher levels of species diversity in the longitudinal middle‐courses of river systems and have proposed many explanations. As a new explanation for this widespread pattern, we suggest that many middle‐course peaks in richness may be, at least in part, a consequence of geometric constraints on the location of species’ ranges along river courses, considering river headwaters and mouths as boundaries for the taxa considered. We demonstrate this extension of the mid‐domain effect (MDE) to river systems for riparian plants along two rivers in Sweden, where a previous study found a middle‐course peak in richness of natural (non‐ruderal) species. We compare patterns of empirical richness of these species to null model predictions of species richness along the two river systems and to spatial patterns for six environmental variables (channel width, substrate fineness, substrate heterogeneity, ice scour, bank height, and bank area). In addition, we examine the independent prediction of mid‐domain effects models that species with large ranges, because the location of their ranges is more constrained, are more likely to produce a mid‐domain peak in richness than are species with small ranges. Species richness patterns of riparian plants were best predicted by models including both null model predictions and environmental variables. When species were divided into large‐ranged and small‐ranged groups, the mid‐domain effect was more prominent and the null model predictions were a better fit to the empirical richness patterns of large‐ranged species than those of small‐ranged species. Our results suggest that the peak in riparian plant species richness in the middle courses of the rivers studied can be explained by an underlying mid‐domain effect (driven by geometric constraints on large‐ranged species), together with environmental effects on richness patterns (particularly on small‐ranged species). We suggest that the mid‐domain effect may help to explain similar middle‐course richness peaks along other rivers.     

Distribution of alien animal species richness in the Czech Republic

Biogeographical barriers formed by natural forces over billions of years have been substantially disrupted by human activity, particularly in recent centuries. In response to these anthropogenic changes, global homogenization of biota is observed at an ever‐increasing rate, causing environmental and economic losses as well as emerging health risks. Identifying factors underlying alien species richness is essential for prevention of future introductions and subsequent spread. In this study, we examined the effects of environmental and human‐related factors on distribution of alien animal species richness in the Czech Republic (Central Europe). We compiled a set of maps showing the level of invasion of six categories of alien animal species in each of 628 grid cells (ca. 12.0 × 11.1 km) covering the Czech Republic. Relationships between alien species richness and 12 variables characterizing climatic conditions, topography, land cover, and human population size were calculated using the generalized least squares method. Species richness of all alien species, of invertebrates, and of terrestrial species showed the strongest positive relationship with mean annual temperature, while the number of black and grey (proposed prominent invaders) and aquatic species was most closely related to the presence of large rivers. Alien vertebrates showed a strong negative relationship with annual precipitation. The highest alien animal species richness was found in and near large population centers and in agricultural landscapes in warm and dry lowlands. The gateways for alien aquatic species are rather large rivers over sport fishing and aquaculture import. Compiled maps create a powerful visual communication tool, useful in development of programs to prevent future introductions.     

Patterns of fish species richness in China's lakes

Aim To document the patterns of fish species richness and their possible causes in China's lakes at regional and national scales. Location Lakes across China. Methods We compiled data of fish species richness, limnological characteristics and climatic variables for 109 lakes across five regions of China: East region, Northeast region, Southwest region, North‐Northwest region, and the Tibetan Plateau. Correlation analyses, regression models and a general linear model were used to explore the patterns of fish species richness. Results At the national scale, lake altitude, energy availability (potential evapotranspiration, PET) and lake area explained 79.6% of the total variation of the lake fish species richness. The determinants of the fish richness pattern varied among physiographic regions. Lake area was the strongest predictor of fish species richness in the East and Southwest lakes, accounting for 22.2% and 82.9% of the variation, respectively. Annual PET explained 68.7% of the variation of fish richness in the Northeast lakes. Maximum depth, mineralization degree, and lake area explained 45.5% of the fish variation in the lakes of the North‐Northwest region. On the Tibetan Plateau, lake altitude was the first predictor variable, interpreting 32.2% of the variation. Main conclusions Lake altitude was the most important factor explaining the variation of fish species richness across China's lakes, and accounted for 74.5% of the variation. This may stem in part from the fact that the lakes investigated in our study span the largest altitudinal range anywhere in the world. The effects of the lake altitude on fish species richness can be separated into direct and indirect aspects due to its collinearity with PET. We also found that the fish diversity and its determinants were scale‐dependent. Fish species richness was probably energy‐determined in the cold region, while it was best predicted by the lake area in the relatively geologically old region. The independent variables we used only explained a small fraction of the variations in the lake fish species richness in East China and the Tibetan Plateau, which may be due to the effects of human activity and historical events, respectively.