Three-dimensional convective alveolar flow induced by rhythmic breathing motion of the pulmonary acinus

Low Reynolds number flows (Re<1) in the human pulmonary acinus are often difficult to assess due to the submillimeter dimensions and accessibility of the region. In the present computational study, we simulated three-dimensional alveolar flows in an alveolated duct at each generation of the pulmonary acinar tree using recent morphometric data. Rhythmic lung expansion and contraction motion was modeled using moving wall boundary conditions to simulate realistic sedentary tidal breathing. The resulting alveolar flow patterns are largely time independent and governed by the ratio of the alveolar to ductal flow rates, Qa/Qd. This ratio depends uniquely on geometrical configuration such that alveolar flow patterns may be entirely determined by the location of the alveoli along the acinar tree. Although flows within alveoli travel very slowly relative to those in acinar ducts, 0.021%相似文献   

Difference in bacterial motion between forward and backward swimming caused by the wall effect

A bacterial cell that has a single polar flagellum alternately repeats forward swimming, in which the flagellum pushes the cell body, and backward swimming, in which the flagellum pulls the cell body. We have reported that the backward swimming speeds of Vibrio alginolyticus are on average greater than the forward swimming speeds. In this study, we quantitatively measured the shape of the trajectory as well as the swimming speed. The trajectory shape in the forward mode was almost straight, whereas that in the backward mode was curved. The same parameters were measured at different distances from a surface. The difference in the motion characteristics between swimming modes was significant when a cell swam near a surface. In contrast, the difference was indistinguishable when a cell swam >60 microm away from any surfaces. In addition, a cell in backward mode tended to stay near the surface longer than a cell in forward mode. This wall effect on the bacterial motion was independent of chemical modification of the glass surface. The macroscopic behavior is numerically simulated on the basis of experimental results and the significance of the phenomenon reported here is discussed.     

Effects of wall motion and compliance on flow patterns in the ascending aorta

Helical flows have been observed in the ascending aorta in vivo, and geometric curvature has been suggested to be a major contributing factor. We employed magnetic resonance imaging (MRI) and velocity mapping to develop a computational model to examine the effects of curvature and also wall compliance and movement upon flow patterns. In the computational model, MRI-derived geometry and velocities were imposed as boundary conditions, which included both radial expansion-contraction and translational motion of the wall. The computed results were in agreement with the MR data only when full wall motion was included in the model, suggesting that the flow patterns observed in the ascending aorta arise not only from geometric curvature of the arch but also from the motion of the aorta resulting from its attachment to the beating heart.     

Membrane structural perturbations caused by anesthetics and nonimmobilizers: a molecular dynamics investigation.

The structural perturbations of the fully hydrated dimyristoyl-phosphatidylcholine bilayer induced by the presence of hexafluoroethane C(2F6), a "nonimmobilizer," have been examined by molecular dynamics simulations and compared with the effects produced by halothane CF3CHBrCl, an "anesthetic," on a similar bilayer (DPPC) (Koubi et al., Biophys. J. 2000. 78:800). We find that the overall structure of the lipid bilayer and the zwitterionic head-group dipole orientation undergo only a slight modification compared with the pure lipid bilayer, with virtually no change in the potential across the interface. This is in contrast to the anesthetic case in which the presence of the molecule led to a large perturbation of the electrostatic potential across to the membrane interface. Similarly, the analysis of the structural and dynamical properties of the lipid core are unchanged in the presence of the nonimmobilizer although there is a substantial increase in the microscopic viscosity for the system containing the anesthetic. These contrasting perturbations of the lipid membrane caused by those quite similarly sized molecules may explain the difference in their physiological effects as anesthetics and nonimmobilizers, respectively.     

Osmotic flow caused by polyelectrolytes

Osmotic flow of water caused by high concentrations of anionic polyelectrolytes across semipermeable membranes, permeable only to solvent and simple electrolyte, has been measured in a newly designed flow cell. The flow cell features small solution and solvent compartments and an efficient stirring mechanism. We have demonstrated that, while the osmotic pressure of the anionic polyelectrolytes is determined primarily by micro-counterions, the osmotic flow is determined by solution-dependent properties as embodied in the hydrodynamic frictional coefficient which is determined by the polymer backbone segment of the polyelectrolyte. The variation of the osmotic permeability coefficient, L(p)(o), with concentration and osmotic pressure closely correlated with the concentration dependence of this frictional coefficient. These studies confirm previous work that the kinetics of osmotic flow across a membrane impermeable to the osmotically active solute is primarily determined by the diffusive mobility of the solute.     

Structural perturbations in DNA caused by bis-intercalation of ditercalinium visualised by atomic force microscopy

Atomic force microscopy (AFM) has been used to examine perturbations in the tertiary structure of DNA induced by the binding of ditercalinium, a DNA bis-intercalator with strong anti-tumour properties. We report AFM images of plasmid DNA of both circular and linearised forms showing a difference in the formation of supercoils and plectonemic coils caused at least in part by alterations in the superhelical stress upon bis-intercalation. A further investigation of the effects of drug binding performed with 292 bp mixed-sequence DNA fragments, and using increment in contour length as a reliable measure of intercalation, revealed saturation occurring at a point where sufficient drug was present to interact with every other available binding site. Moment analysis based on the distribution of angles between segments along single DNA molecules showed that at this level of bis-intercalation, the apparent persistence length of the molecules was 91.7 ± 5.7 nm, approximately twice as long as that of naked DNA. We conclude that images of single molecules generated using AFM provide a valuable supplement to solution-based techniques for evaluation of physical properties of biological macromolecules.     

Ripening-related perturbations in apple cell wall nuclear spin dynamics

Spin-lattice (¹HT₁, ²³Na⁺T₁) and rotating frame spin-lattice (¹HT_1p, ¹³CT_1p) relaxation times were measured on intact, critical point dried apple tissue at various degrees of ripeness using cross polarization and magic angle spinning (CPMAS) NMR techniques. Solid state carbonyl (δ172)¹³CT_1p and ²³Na⁺-carboxylate anion T₁ values, which are inversely proportional to carboxylate reorientation rates, decreased 15–19% during the time course study. Carbonyl resonance ¹HT₁s diminished by 63% as the tissue softened; a maximal decline of 42% was also observed in the ¹HT₁s of nonspecific carbohydrate ring carbon signals (δ74) indicating an increase in both acidic and neutral polymer motion. Treatment of the cell wall with polygalacturonase resulted in a significant decrease in both carbonyl and ring carbon ¹HT₁s (57 and 42%, respectively) demonstrating the important structural function of polyuronides not only in the middle lamellae but also in the primary cell wall.     

Interaction between left ventricular wall motion and intraventricular flow propagation in acute and chronic ischemia

Myocardial ischemia has been associated with left ventricular (LV) postsystolic shortening. The combination of tissue Doppler imaging and high frame-rate acquisition of two-dimensional color flow makes it possible to study the interaction between LV wall motion and intraventricular flow propagation. The aim of this study was to examine in a clinical model the impact that acute myocardial ischemia and prior myocardial infarct might have on LV flow patterns and to explain the underlying mechanisms from the tissue Doppler data. LV flow propagation and tissue velocities during early diastole were studied in 18 healthy individuals, 17 patients with prior anterior myocardial infarct, and 16 patients before and during percutaneous coronary intervention (PCI) of the left anterior descending artery. Normal individuals had intraventricular flow propagation toward the apex during isovolumic relaxation. During this early diastolic time phase, myocardial velocities measured at mid- and apical septal segment were directed away from the apex. Before PCI, patients without myocardial infarction had similar findings as in normal individuals. In contrast, each patient with either prior myocardial infarction or PCI-induced acute ischemia had flow propagation opposite to normal individuals, and tissue velocities reversed toward the apex during early diastole. Reversal of early diastolic LV flow propagation in acute and chronic anterior myocardial ischemia reflects postsystolic shortening in the dyskinetic apical and septal myocardial segments.     

Investigation of left heart flow using a numerical correlation to model heart wall motion

A three-dimensional computational fluid dynamics (CFD) method has been developed to model the flow in the left heart including atrium and ventricle. Since time resolution of the medical scans does not fit the requirements of the CFD calculations, the main challenge in a numerical simulation of heart chambers is wall motion modeling. This study employs a novel three-dimensional approximation scheme to correlate the wall boundary and grid movement in systole and diastole. It uses a geometry extracted from medical images in the literature and deformed based on the reported flow rates. The opening and closing of the mitral (MV) and the aortic valve (AV) considered as simultaneous events. Unstructured tetragonal grids were used for the meshing of the domain. The calculation was performed by a Navier–Stokes solver using the arbitrary Lagrange–Euler (ALE) formulation. Results show that the proposed correlation for the wall motion could predict the main features of heart flows.     

Cell cycle perturbations in normal and transformed fibroblasts caused by detachment from the substratum

Exponentially growing, anchorage-dependent fibroblasts were impeded in their progress through the cell cycle as a result of brief trypsinization from the substratum followed by replating. Untransformed mouse (3T3, clone A31), hamster (CHEF/18-1) and human (FS2) fibroblasts were partially inhibited from entering the DNA synthetic (S) phase of the cell cycle for 8 or 12 hours after detachment, even though the cells reattached within an hour of replating and attained a spread morphology 5 or 8 hours later. The decline in the proportion of cells in S phase was accompanied accumulation of cells in G1 as measured by autoradiography and flow microfluorimetry. Cells removed from the substratum by EDTA alone showed identical disturbances of exponential growth. These cell cycle perturbations could be a result of the detachment per se, as opposed to the rounded morphology. Synchronized A31 cells, exposed to colcemid or cytochalasin B for two hours, were not delayed in their entry into S, whereas trypsinization delayed S phase entry by 4 to 5 hours. These drugs disrupt the cytoskeleton without causing detachment. Isotope incorporation experiments revealed no decreases in the rates of protein or RNA synthesis following replating. However, exponentially growing A31 cells, treated for 2 hours with an inhibitor of protein synthesis behaved similarly to those briefly detached from their substratum: 7 hours after treatment, there were fewer cells in S and more cells in G1 relative to untreated cells. Brief treatment with an inhibitor of hn-RNA synthesis did not alter the cell cycle distribution of these fibroblasts. Three tumorogenic A31 derivatives were less affected by brief detachment from the substratum than were the untransformed cells. The derivative exhibiting the least in vitro growth control (an SV-40 transformant) showed the least sensitivity to trypsinization, while that derivative having the most in vitro growth control (a Moloney sarcoma virus transformant) was most sensitive. A chemically [benzo(a)pyrene] transformed derivative gave intermediate results with respect to both growth control and sensitivity to detachment from the substratum. The results suggest that as yet unidentified protein(s) necessary for the normal transit through G1 may be quite sensitive to the presence of an anchoring substratum.     

Preference suppression caused by misattribution of task-irrelevant subliminal motion

It is well known that subjects tend to misattribute task-irrelevant signals, incorporating them into the information on which a decision is made. Such misattribution has been reported to originate only from a social or a cognitive stage of information processing. However, we provide the initial evidence that misattribution also originates at a lower, visuomotor stage. This type of misattribution occurs only when subjects do not notice a visuomotor conflict. Misattribution at a social or a cognitive stage facilitates decision-making if the misattributed information is consistent with the decision and impedes decision-making if the information is in conflict with the decision. However, misattribution originating at a visuomotor stage only impedes decision-making, suggesting a fundamental difference between the mechanisms for the two types of misattribution. Furthermore, misattribution effects that originate in a visuomotor interaction stage also affect subjective preference ratings, suggesting that the misattribution exerts an influence on global brain processing.     

Gate mechanism in breathlessness caused by chest wall vibration in humans

The effects of bilateral alternating out-of-phase vibrations were studied in 10 normal healthy subjects and five asthmatic patients. The second or third intercostal spaces were vibrated during expiration, and the seventh to ninth intercostal spaces were vibrated during inspiration. Most subjects sensed breathlessness during such vibrations, and 100 Hz was most effective. The degree of breathlessness correlated positively with increased respiratory rate. Respiratory rate increased from 14.1 +/- 3.78 (mean +/- SD) to 22.3 +/- 7.14 breaths/min (P less than 0.05) during relatively severe breathlessness and to 20.39 +/- 5.66 breaths/min (P less than 0.05) during less uncomfortable sensation. Slight or negligible breathlessness induced no significant increase in rate (15.33 +/- 4.19 breaths/min). All asthma patients described the sensations during vibration as similar to those during asthma attacks, and their respiratory rates increased 20.7 +/- 11.03% during 100 Hz vibration (P less than 0.01). It is suggested that the uncomfortable sensation of breathlessness may be induced by muscle spindles in the intercostal muscles being activated out of phase with the respiratory cycle. The central mechanism that receives the intercostal afferents may have a certain gate that operates in relation to the sensation of breathlessness.     

Statistical perturbations in personal exposure meters caused by the human body in dynamic outdoor environments

Personal exposure meters (PEM) are routinely used for the exposure assessment to radio frequency electric or magnetic fields. However, their readings are subject to errors associated with perturbations of the fields caused by the presence of the human body. This paper presents a novel analysis method for the characterization of this effect. Using ray‐tracing techniques, PEM measurements have been emulated, with and without an approximation of this shadowing effect. In particular, the Global System for Mobile Communication mobile phone frequency band was chosen for its ubiquity and, specifically, we considered the case where the subject is walking outdoors in a relatively open area. These simulations have been contrasted with real PEM measurements in a 35‐min walk. Results show a good agreement in terms of root mean square error and E‐field cumulative distribution function (CDF), with a significant improvement when the shadowing effect is taken into account. In particular, the Kolmogorov–Smirnov (KS) test provides a P‐value of 0.05 when considering the shadowing effect, versus a P‐value of 10⁻¹⁴ when this effect is ignored. In addition, although the E‐field levels in the absence of a human body have been found to follow a Nakagami distribution, a lognormal distribution fits the statistics of the PEM values better than the Nakagami distribution. As a conclusion, although the mean could be adjusted by using correction factors, there are also other changes in the CDF that require particular attention due to the shadowing effect because they might lead to a systematic error. Bioelectromagnetics 32:209–217, 2011. © 2010 Wiley‐Liss, Inc.