Modelling the habitat preferences of preadult and adult fishes on the shoreline of the large, lowland Elbe River

From the years 1997 to 2000, fish assemblages from 15 groyne fields and training walls (a current guiding dyke, protecting the groyne field) of the Middle Elbe River (Germany) were examined by electrofishing. The aim of the study was to detect abiotic environmental key variables which determine preadult and adult fish assemblage in typical riverbank structures using multivariate ordination techniques (canonical correspondence analysis) and univariate methods (logistic regression analysis). Habitat preferences of preadult and adult stages of selected fish species were also estimated. Fish sampling was carried out at 190 river stretches; a further 1615 samples were taken by the point‐abundance sampling method. In total, 21 732 preadult and adult individuals belonging to 30 fish species were caught; perch, eel, ide, roach, chub, gudgeon, bleak and white bream were the most frequent. Eurytopic species clearly dominated the fish assemblage with 72% total abundance, followed by rheophilic species (26%). Limnophilic fish species (rudd, crucian carp, stickleback and tench) were relatively rare (2% of total abundance), with frequencies of occurrence between 1 and 10%. The highest species diversities were estimated in structurally diverse training walls and groyne fields with defective groynes, whereas low species diversity was found to occur in poorly structured, strongly silted groyne fields with intact groynes. Additionally, typical seasonal and annual changes of the fish assemblage were observed. From the mesoscalic point of view, the structure of the preadult and adult fish assemblage was affected by both spatial (type of groyne field, river stretch) and temporal factors (year, season). Regarding the microhabitat, hydromorphological parameters (slope, current velocity, water level, predominant and secondary substrate) followed by physicochemical water values [dissolved oxygen (DO), temperature and pH‐value] are of significance for the structure of the fish community. Furthermore, hiding places (shelter) are of subordinate but significant importance for the fish assemblage in the poorly structured main channel of the Elbe River. Importance of hydromorphological factors on the microhabitat scale was confirmed by multiple logistic regression in 12 of 14 preference models, conducted for different ontogenetic stages of roach, bream, white bream, bleak, ide, chub, gudgeon, asp, perch and eel. Habitat preferences of adult bleak and preadult roach were first determined by physicochemical water values and seasonal influences. Univariate models were generated to describe specific habitat preferences of different species and age‐stages regarding the most important environmental variables (depth, velocity, predominant substrate, slope and shelter). Intraspecific differences were noticed between preadult and adult chub regarding preferences for water velocity, or between preadult and adult perch concerning slope of shore. Interspecific differences were observed, e.g. between adult roach and white bream, with regard to the use of shelters.     

Suitability Modeling of Lake Sturgeon Habitat in Five Northern Lake Michigan Tributaries: Implications for Population Rehabilitation

The availability of lotic spawning, staging, and nursery habitats is considered a major factor limiting the recovery of Lake sturgeon ( Acipenser fulvescens ) in Lake Michigan. Despite efforts to better understand the population biology and habitat use of remnant Lake sturgeon stocks, little information exists on the quantity, quality, and spatial distribution of habitats for riverine life stages. We applied georeferenced habitat information on substrate, water depth, and stream gradient to a Lake sturgeon habitat suitability index in a geographic information system to produce spatially explicit models of life stage–specific habitat characteristics in the Menominee River, Michigan–Wisconsin; the Peshtigo, Oconto, and lower Fox rivers, Wisconsin; and the Manistique River, Michigan. High-quality Lake sturgeon spawning habitat associated with coarse substrates (≥2.1 mm) and moderate- to high-stream gradients (≥0.6 m/km) comprised 1–6% of the available habitat in each system. Staging habitat characterized by water depths greater that 2 m located near potential spawning habitat comprised an additional 17–41%. However, access to a majority of these habitat types (range 30–100%) by Lake sturgeon from Lake Michigan is currently impeded by dams. High-quality juvenile Lake sturgeon habitat associated with finer substrates, lower stream gradients, and a broad range of water depths (i.e., 0.5–8 m) was relatively ubiquitous throughout each system and comprised 69–100% of the available habitat. Our study suggests that efforts to rehabilitate Lake sturgeon populations should consider providing fish passage and creating supplemental spawning habitat to increase reproductive and recruitment potential.     

Fish habitat modelling as a tool for river management

This paper presents an integrated modelling approach to simulate and assess ecological effects of physical habitat changes in rivers. An ecohydraulic simulation tool was created by combining a 1D hydraulic model based on HEC-RAS software and the fish habitat module of CASiMiR, a fuzzy logic-based ecohydraulic modelling system. This tool was applied on a river stretch commonly occurring in Belgium and elsewhere in Europe. In particular the effect of weir removal on habitat suitability for bullhead (Cottus gobio L.) was simulated. Physical conditions of the studied stretch after weir removal were simulated with a hydraulic model. CASiMiR linked these conditions to ecological expert knowledge to calculate habitat suitability for three life stages of bullhead at four different flow rates based on fuzzy logic. Results indicated that after weir removal, habitat suitability increased significantly for all life stages and all flow rates. The presented approach is promising regarding fish community assessment and ecological river engineering.     

Spatial and ontogenetic variability in the microhabitat use of stream-dwelling spined loach (Cobitis taenia) and stone loach (Barbatula barbatula)

Ontogenetic and spatial variability in microhabitat use of spined loach Cobitis taenia (Linnaeus), considered as one species for the purposes of this study, and stone loach Barbatula barbatula (Linnaeus) were examined in the River Great Ouse basin, England, using multivariate and habitat suitability methods, including a technique for handling spatial variation in collections of preference curves. Distinct ordinations of spined age classes and stone loach developmental stages, respectively, in canonical correspondence analysis of species × variables × samples relationships suggest that the two species occupy completely different microhabitats; however, young‐of‐the‐year spined loach occurred more often than expected with all developmental stages of stone loach except young larvae. Water velocity and filamentous algae were the most influential microhabitat variables, the latter decreasing in importance with increasing age of both fish species. Preferred water velocities generally decreased with age in spined loach and increased in stone loach, with substratum size generally increasing with fish age in both species. Spatial variation in microhabitat preferences was great in both species but less so in the spined loach, suggesting that limited plasticity in habitat use could account, at least in part, for the latter species’ limited distribution and abundance in the catchment. Preference curves for a species, if generated and verified for all life intervals and all seasons, could be used as a management tool for a given stream or sector of river basin. But preference curves should be generated for each location to ensure that river management decisions with regard habitat and species conservation consider local‐level species requirements. Thus, a multi‐(eco)species and multi‐scale approach is required in habitat suitability assessments.     

What are the reasons for the Prussian carp expansion in the upper Elbe River, Czech Republic?

Fifty five Prussian carp Carassius auratus gibelio were radio‐tracked weekly along the course of the upper Elbe River, for 15 months. In addition, diurnal movements were observed in three different habitat types (main channel, navigation canal and floodplain areas). Fish species composition from 10 fish ladders was regularly analysed in 1996, 2000 and 2001, and patterns of juvenile (0+ year) fish distribution and abundance were collected in 2000 and 2001, to support telemetric data on longitudinal migrations, and habitat preference within the studied stretch. Downstream migrations dominated in all seasons, being most intensive in spring and reaching a maximum distance of 85 km. Migration stopped when specimens found a floodplain area, where they occupied larger home ranges compared to the main channel. Migrations upstream of up to 2 km were rare, and specimens did not enter fish ladders. Spontaneous reproduction only occurred on the floodplain and its success was very low. The results suggested that neither upstream migrations, nor spontaneous reproduction represented the key mechanism for the Prussian carp invasion into the Elbe catchment area of the Czech Republic. It can be assumed that escapes from aquaculture activities are primarily responsible for its expansion.     

Seasonal changes in habitat suitability for adult shovelnose sturgeon in the lower Mississippi River

Shovelnose sturgeon Scaphirhynchus platorynchus are a large‐river fish distributed throughout the Mississippi River basin, including the lower 1,533 km of the Mississippi River where riverine habitat has been and continues to be modified for navigation and is a potential site for development of instream hydrokinetic electric power generation. Information about habitat use and preference is essential to future conservation efforts. Shovelnose sturgeon have previously been found to select particular habitat types, and these selected habitats vary seasonally; although these past analyses do not consider the selected habitats in a landscape context. We used ecological niche factor analysis (ENFA) that uses distributions of telemetry locations and environmental variables to model habitat suitability in a landscape context. We recorded 333 locations of shovelnose sturgeon during July–December 2013 that included periods of relatively high and low river stages. The ENFA analysis indicated high‐suitability locations were in or near deep water during both high and low river stages. During high river stages, high‐suitability locations were near island tip habitat, deep water, and steep bottom slope and far from main channel habitat. During low stages, high‐suitability locations were in or near deep water and main channel habitat and far from secondary channel and wing dike habitats. This landscape‐scale analysis supports seasonal shifts in habitat use and provides insights that can be used to inform habitat conservation and management to benefit shovelnose sturgeon in the lower Mississippi River and possibly other large rivers.     

小浪底水库运行对黄河鲤鱼栖息地的影响

通过历史文献和实地生态调查,了解黄河鲤鱼生态习性及与径流组分响应关系,在此基础上,通过分析水库对径流组分影响,建立栖息地模拟模型,研究小浪底水库运行对黄河鲤鱼生存繁衍的影响。研究表明:(1)径流的流量组分与黄河鲤鱼的生态习性有密切的相关关系,小浪底水库的运行显著改变了流量脉冲、小洪水及大洪水,流量脉冲消失或减少使得黄河鲤鱼产卵缺乏足够的产卵栖息地;小洪水减少使黄河鲤鱼的食物来源和栖息地减少;漫滩洪水减少和消失使黄河鲤鱼失去从河滩地获得食物和栖息地机会。(2)通过建立River2D模型,得到了不同流量下黄河鲤鱼在不同生命阶段栖息地面积的变化情况,研究表明,建库后大于1400m3/s流量的显著减少,影响了黄河鲤鱼的产卵;建库后花园口低限流量变化不明显,建库对成鱼和幼鱼生存的影响不大。     

Habitat models for a riparian carabid beetle: their validity and applicability in the evaluation of river bank management

In order to assess the management success of river rehabilitation measurements it is necessary to have representative target species and objective statistical methods. In this study we, tested the validity of habitat suitability models for the riparian carabid beetle Bembidion velox in the evaluation of river bank management along the River Elbe, Germany. On the basis of seven independent data sets from different sites and years we have proven the robustness of logistic regression models with respect to their explanatory and predictive power and their applicability in the field. All models had robust explanatory power and described a strong association of B. velox with semi-terrestrial sandy open soil habitats. Transfers of model results for adult beetles to their larvae and vice versa were highly significant with “sand content” and “stem distance” as the main habitat factors for both life stages. To broaden the local explanatory power towards general predictions we performed model cross-validation in space and time. Spatial transfers produced models with excellent discrimination properties, measured by Area Under Curve (AUC) values of Receiver Operating Characteristics (ROC) plots, independent of sampling designs and trapping methodology. However, the applicability of habitat models for B. velox is defined by the validity period, as the availability of suitable habitats for this species is highly temporally variable and dependent on water level. Model transfers between species also demonstrated that the chosen target species is representative for carabids with similar distribution patterns, as the single species model had high predictive power for the occurrence of a multi-species carabid group.     

Benefits of Turbid River Plume Habitat for Lake Erie Yellow Perch (Perca flavescens) Recruitment Determined by Juvenile to Larval Genotype Assignment

Nutrient-rich, turbid river plumes that are common to large lakes and coastal marine ecosystems have been hypothesized to benefit survival of fish during early life stages by increasing food availability and (or) reducing vulnerability to visual predators. However, evidence that river plumes truly benefit the recruitment process remains meager for both freshwater and marine fishes. Here, we use genotype assignment between juvenile and larval yellow perch (Perca flavescens) from western Lake Erie to estimate and compare recruitment to the age-0 juvenile stage for larvae residing inside the highly turbid, south-shore Maumee River plume versus those occupying the less turbid, more northerly Detroit River plume. Bayesian genotype assignment of a mixed assemblage of juvenile (age-0) yellow perch to putative larval source populations established that recruitment of larvae was higher from the turbid Maumee River plume than for the less turbid Detroit River plume during 2006 and 2007, but not in 2008. Our findings add to the growing evidence that turbid river plumes can indeed enhance survival of fish larvae to recruited life stages, and also demonstrate how novel population genetic analyses of early life stages can contribute to determining critical early life stage processes in the fish recruitment process.     

Comparing correlative and bioenergetics‐based habitat suitability models for drift‐feeding fishes

相似文献   

Assessing the influence of habitat quality on movements of the endangered shortnose sturgeon

Movements of the endangered shortnose sturgeon Acipenser brevirostrum in the Ogeechee River (Georgia, USA) may be limited by unsuitable habitat conditions during June–September. The research objective was to determine if habitat quality is likely to impede movements and spawning of shortnose sturgeon in this system. We inserted ultrasonic transmitters in 18 adult shortnose sturgeon to monitor their monthly in-stream movements. Water quality data were collected at discrete locations along the Ogeechee River. We used geostatistical models based on Weighted Asymmetric Hydrologic Distance, in place of Euclidean distance, to predict water quality variables along the Ogeechee River, avoiding problems associated with linear distance metrics in a river network. Using ArcGIS, we constructed habitat quality models based on physiological tolerance to water temperature, dissolved oxygen, and salinity. During the summer months, tagged fish remained congregated above the fresh-saltwater interface. However, individuals appeared to move in response to changing water quality conditions. Seasonal habitat availability in other southern rivers should be similarly analyzed to assess potential relationships between the habitat and sturgeon movements. Although further laboratory and field studies are needed to better understand latitudinal variation in life history and environmental tolerances of shortnose sturgeon, the results of our study suggest that temporal and spatial variability in water quality affect habitat availability of southern populations of shortnose sturgeon.     

Habitat models and their transfer for single and multi species groups: a case study of carabids in an alluvial forest

Environmental factors influencing the occurrence of single species and multi species groups of carabids in alluvial forest al the River Elbe were determined with habitat suitability models. Two representative species for different ecotypes present in the investigated community. Agonum livens and Pterostichus oblongopunctatus. were defined by means of a discriminant analysis. The two species differed greatly in their microhabitat distribution, Agonum livens was chosen as target species for a multi species group of wetland species that inhabited the fringes of temporary waters in the forest. In contrast, P. oblongopunctatus should represent species of deciduous forests. Using stepwise multiple logistic regression statistically significant habitat suitability models were estimated, reliably predicting the species" occurrence, A subsequent evaluation by cross-validations and receiver operating characteristic (ROC) curves indicated a high discriminatory power. A transfer of the model onto different data sets in time was applied to validate the model. Alternatively, a multi species habitat model, taking into account weighted occurrence data of the wetland species group, was estimated. In order to show that the chosen target species truly holds an umbrella effect upon the represented multi species group, we used ROC curves to indicate the transferability of the target species' habitat model for the multi species group and vice versa.     

Inter‐patch movement in an experimental system: the effects of life history and the environment

An important process for the persistence of populations subjected to habitat loss and fragmentation is the dispersal of individuals between habitat patches. Dispersal involves emigration from a habitat patch, movement between patches through the surrounding landscape, and immigration into a new suitable habitat patch. Both landscape and physical condition of the disperser are known to influence dispersal ability, although disentangling these effects can often be difficult in the wild. In one of the first studies of its kind, we used an invertebrate model system to investigate how dispersal success is affected by the interaction between the habitat condition, as determined by food availability, and life history characteristics (which are also influenced by food availability). Dispersal of juvenile and adult mites (male and female) from either high food or low food natal patches were tested separately in connected three patch systems where the intervening habitat patches were suitable (food supplied) or unsuitable (no food supplied). We found that dispersal success was reduced when low food habitat patches were coupled to colonising patches via unsuitable intervening patches. Larger body size was shown to be a good predictor of dispersal success, particularly when the intervening landscape is unsuitable. Our results suggest that there is an interaction between habitat fragmentation and habitat suitability in determining dispersal success: if patches degrade in suitability and this affects the ability to disperse successfully then the effective connectance across landscapes may be lowered. Understanding these consequences will be important in informing our understanding of how species, and the communities in which they are embedded, may potentially respond to habitat fragmentation.     

模糊数学方法模拟水库运行影响下鱼类栖息地的变化

水库调度改变了河流水文情势,从而使得水生动植物栖息地的空间分布发生明显的变化。针对水库运行对鱼类栖息地的影响,利用模糊数学方法建立栖息地模型,并与水环境模型耦合,分析不同水文情势下鱼类在不同生长期的栖息地变化情况。基于专家分析法建立模糊函数隶属度及规则集,计算栖息地适宜性指数(HSI),提出适宜栖息地宽度指数(HSWI)表征河道内栖息地连通性,并对栖息地变化的有效性进行分析。选取漓江下游的某个复式河道为对象,模拟特征鱼种光倒刺鲃(Spinibarbus hollandi)在典型水文年份中水库不同调节模式下的栖息地变化情况。结果表明,在丰水年及枯水年的产卵期,水库补水明显增加了鱼类适宜栖息地面积,其中高适应性区域面积增幅近50%,而平水年影响较小;水库补水对越冬场的影响则相对微弱,仅增加5%左右。     

Effects of alternate reef states on coral reef fish habitat associations

The present study describes ontogenetic shifts in habitat use for 15 species of coral reef fish at Rangiroa Atoll, French Polynesia. The distribution of fish in different habitats at three ontogenetic stages (new settler, juvenile, and adult) was investigated in coral-dominated and algal-dominated sites at two reefs (fringing reef and inner reef of motu). Three main ontogenetic patterns in habitat use were identified: (1) species that did not change habitats between new settler and juvenile life stages (60% of species) or between juvenile and adult stages (55% of species—no ontogenetic shift); (2) species that changed habitats at different ontogenetic stages (for the transition “new settler to juvenile stage”: 15% of species; for the transition “juvenile to adult stage”: 20% of species); and (3) species that increased the number of habitats they used over ontogeny (for the transition “new settler to juvenile stage”: 25% of species; for the transition “juvenile to adult stage”: 25% of species). Moreover, the majority of studied species (53%) showed a spatial variability in their ontogenetic pattern of habitat use according to alternate reef states (coral reef vs algal reef), suggesting that reef state can influence the dynamics of habitat associations in coral reef fish.     

Assessing the effect of the Three Gorges reservoir impoundment on spawning habitat suitability of Chinese sturgeon (Acipenser sinensis) in Yangtze River,China

The Chinese sturgeon (Acipenser sinensis), a kind of maricolous anadromous migratory fish species, is endangered and protected in China. Historical spawning habitats were distributed in the lower reaches of Jinsha River and the upper reaches of Yangtze River. Since the establishment of the Gezhouba water conservancy pivot in 1981, the migratory route of Chinese sturgeon spawning was blocked. Therefore, the fish was forced to propagate in a new spawning ground which was mainly distributed in the 4-km-long mainstream from Gezhouba Dam to Miaozui in the middle Yangtze River. After water storage and power generation of the Three Gorges reservoir (TGR) in 2003, the propagation of Chinese sturgeon has been impacted gradually. According to field surveys, the fish used to spawn twice a year before TGR impoundment, but only once happened after that. Besides, the spawning scale is also declining with each passing year.In order to simulate and evaluate the effect of TGR impoundment on spawning habitats of Chinese sturgeon, with consideration of their reproductive characteristics, an eco-hydrodynamic model was established by coupling a two-dimensional hydrodynamic model and a fuzzy fish habitat module based on fuzzy logic inference. Flow fields at the studied site in an impoundment scenario and an assumed no impoundment scenario were simulated with the 2D hydrodynamic model. Afterwards, by linking hydrodynamic conditions to the expert knowledge base, the fuzzy habitat model used fuzzy logic inference to compute habitat suitability of the Chinese sturgeon. In addition, the approach was used to propose a suitable instream flow range during the propagation period for Chinese sturgeon. The results indicated that the suitable instream flow needed for Chinese sturgeon spawning in middle Yangtze River should be between 10,000 m³/s and 17,000 m³/s and it also showed that after TGR was put into pilot impoundment operation at the designed water level of 175 m, the habitat suitability has decreased significantly in October. Besides, the water temperature of spawning habitat increased to a higher level in propagation period due to the impoundment of the TGR. All these alterations have had imposed tremendous impacts on the propagation of Chinese sturgeon. Therefore, adjusting impoundment schedule of the TGR to recover the water flow over spawning habitat in October is a crucial way to improve the habitat suitability. Furthermore, the presented method also provides a theoretical basis for further research on the assessment of habitat suitability of aquatic species at a micro-habitat scale.     

Photoperiod as Cues for Determining Optimal Foraging in Developmental Stages in Chitala chitala Hamilton, 1822

Photoperiod plays an important role in controlling the feeding rhythmicity of juvenile fishes. Studies on feeding and spatial distribution pattern were made on wild populations of different juvenile stages of Chitala chitala, a threatened species in India. Results indicated that the prey preference of the fish increased with advancement of developmental stages. Moreover, nocturnal feeding was found to be more significant in the juveniles. Thus, feeding pattern of the different juvenile stages of Chitala is characterized by voracious predatory activity at dark condition. The vector controlling potential of the juvenile stages of Chitala specifically on mosquito and chironomid larvae was also significant. Studies on the distribution pattern of juvenile fishes were made with various combinations, viz. with or without food, in open surface and structured environments and observed during day as well as in dark regime. The juvenile distribution was clumped in open and closed environment during day time to minimize the chances of predation and juvenile mortality irrespective of food availability. A random distribution of juvenile fishes seemed to be advantageous for increasing feeding activity as observed in the experiment. This study is a pointer to the survival strategy of the larvae of C. chitala in their natural habitat which may be important from the perspective of conservation.     

Assessing the effect of Separation Levee Project on Chinese sturgeon (<Emphasis Type="Italic">Acipensor sinensis</Emphasis>) spawning habitat suitability in Yangtze River,China

Chinese sturgeon (Acipenser sinensis) is a protected anadromous fish species. The migration pattern of the fish has been blocked by the construction of Gezhouba Dam, reducing the natural spawning site length to less than 7 km along the Yangtze River. However, the fish has since established an alternative spawning ground in the narrow reach downstream of Gezhouba Dam. To enhance navigation, a Separation Levee Project (SLP) was implemented in the new-found spawning habitat of the fish. To therefore evaluate the effect of the SLP on Chinese sturgeon spawning habitat suitability, the conditions in the spawning habitat were simulated using River2D (a two-dimensional hydrodynamic model). Two main approaches (habitat kinetic energy and circulation metrics) were used in the simulation. The study showed that SLP only slightly changed the physical conditions in the spawning habitat. Using hydrodynamic simulation, the weighted usable area (WUA) before and after the SLP construction was also computed and habitat preference curve developed for water depth and velocity. On the average, SLP reduced WUA—a finding that was consistent with field-measured data. Based on WUA, the habitat conditions were more sensitive to SLP proximity than metrics based on velocity gradients. SLP posed detrimental impacts on the suitability of spawning habitats of Chinese sturgeon. The findings in this study provide further basis for the protection and restoration of Chinese sturgeon spawning habitats in especially the lower reach of Yangtze River.