Spawning seasons of Rasbora tawarensis (Pisces: Cyprinidae) in Lake Laut Tawar,Aceh Province,Indonesia

Background  

Rasbora tawarensis is an endemic freshwater fish in Lake Laut Tawar, Aceh Province, Indonesia. Unfortunately, its status is regarded as critical endangered with populations decreasing in recent years. To date no information on the spawning activities of the fish are available. Therefore, this study provides a contribution to the knowledge on reproductive biology of R. tawarensis especially on spawning seasons as well as basic information for conservation of the species.     

Length‐weight relationships and condition factors of two threatened fishes,Rasbora tawarensis and Poropuntius tawarensis,endemic to Lake Laut Tawar,Aceh Province,Indonesia

Studied were the length‐weight relationships (LWRs) and condition factors of two threatened species, Rasbora tawarensis and Poropuntius tawarensis, endemic to Lake Laut Tawar. The objective of the present study was to establish baseline data on LWRs of the two endemic fishes. The growth pattern for both species was predicted using a Linear Allometric Model (LAM) of length‐weight relationship and Fulton’s condition factor (K_TL) as well as Relative Weight (W_r). The b value of R. tawarensis was relatively similar between females and males, while the b value of female P. tawarensis was slightly higher than in males. Nevertheless, both R. tawarensis and P. tawarensis showed an allometric negative growth pattern. The average K_TL value of R. tawarensis was 1.85 and 1.73 for females and males, respectively, while P. tawarensis had values of 2.44 and 2.41 for females and males, respectively. In addition, the average W_r values of R. tawarensis were 98.9 and 100.45 for females and males respectively, while 102.30 for female and 102.96 for male P. tawarensis, indicating that the condition factors of P. tawarensis were higher than in R. tawarensis.     

Phylogenetic analysis of the genus Rasbora (Teleostei: Cyprinidae)

Liao, T. Y., Kullander, S. O. & Fang, F. (2009). Phylogenetic analysis of the genus Rasbora (Teleostei: Cyprinidae).—Zoologica Scripta, 39, 155–176. A phylogenetic analysis was conducted based on 35 cyprinid taxa, including 29 species of Rasbora, and 41 morphological characters. A strict consensus tree from four equally parsimonious trees recovered rasborins as a monophyletic group characterized by (i) presence of dark supra‐anal pigment and subpeduncular streak, (ii) 5–6 branched anal‐fin rays, (iii) dorsal‐fin insertion 1–3 scales behind pelvic‐fin insertion, (iv) lateral process of second vertebra more or less straight, (v) 1–5 more abdominal than caudal vertebrae, (vi) absence of foramen in anterior wall of horizontal limb of the cleithrum, (vii) presence of rasborin process on epibranchial 4, and (viii) interhyal well ossified. Rasbora sensu stricto can be distinguished from all other rasborin genera by the presence of an opercular canal. Four new genera, viz. Brevibora, n. gen., Kottelatia, n, gen., Rasbosoma, n. gen. and Trigonopoma, n. gen., are recognized and described.     

Morphological and behavioral variation of <Emphasis Type="Italic">Rasbora paviei</Emphasis> (Cyprinidae,Cypriniformes) from lotic and limnic habitats (Central Vietnam)

Morphological and behavioral traits of Rasbora paviei from river and lake environments are studied. For investigations, the fish were caught from the middle reaches of the Cai River and from the inshore zone of the Kam Lam Reservoir (Khanh Hoa Province, Central Vietnam). Phenotypic differences are found in river and lake fish groups. Experimentally, differences in tactics and efficiency of defensive behavior are found in specimens from different habitats in the presence of a predator—Lepisosteus sp. (Lepisosteidae). In river specimens of Rasbora, the defensive reaction is more efficient in comparison with specimens from the reservoir. The river specimens of Rasbora used predominantly the tactics of group defense from the predator and stayed in a school longer than the lake specimens.     

Feeding Ecology of the Allochthonous Feeder Rasbora daniconius (HAMILTON) (Cyprinidae – Teleostei)

Seasonal fluctuations in the dietary components of Rasbora daniconius inhabiting a perennial eutrophic pond have been studied on the basis of analyses of the gut contents over a period of one year from 1980 to 1981. Modified Points method was adopted for the quantitative estimation of the dietary items. Gut analysis revealed that the fish is predominantly an allochthonous feeder subsisting mainly on terrestrial Hymenoptera and Coleoptera. Flowers and seeds also formed part of the dietary composition of the fish. Allochthonous fauna were preferred at all the stages of the growth of the fish. Females have a greater preference for terrestrial Coleoptera and the males for Formicidae. The feeding intensities of three different length groups and both sexes were also ascertained. This revealed that June, July, October and November are the most intensive feeding periods of R. daniconius. Older and mature fishes were found to be more active feeders than juveniles.     

Sequencing and Characterisation of Complete Mitogenome DNA for Rasbora hobelmani (Cyprinidae) with Phylogenetic Consideration

Journal of Ichthyology - The Kottelat rasbora Rasbora hobelmani is a small ray-finned fish categorized under the genus Rasbora in the Cyprinidae family. In this study, the complete mitogenome...     

Genetic variation and Phylogeography of Sinibrama Macrops (Teleostei: Cyprinidae) in Qiantang River Basin,China

A 924 bp segment of the mitochondrial control region (d-loop) was sequenced and analyzed in 334 specimens of Sinibrama macrops from 13 sites in Qiantang River Basin, China. Haplotype diversity (h = 0.724 ± 0.063) and nucleotide diversity (π = 0.00263 ± 0.00027) were lowest in Shengzhou population which had been separated from mainstream of Qiantang River Basin by seawater. The results of pairwise Fst values and average genetic distance revealed significant divergence between Shengzhou and other populations. No geographic clustering was observed in haplotype network, suggesting that there were gene flow among populations except Shengzhou. Pairwise mismatch distributions and Tajima's d-test showed demographic history of Shengzhou population was different from others. Base on the analysis of mitochondrial control region, the differentiation of Shengzhou population was considered to be the result of the transgression and regression in the last interglacial period.     

Genetic variability in Chondrostoma from Austrian, French and Greek rivers (Teleostei, Cyprinidae)

Allozyme variation in Chondrostoma from Austrian, French and northern Greek rivers was investigated. Populations of C. nasus from the upper Danube catchment are genetically very similar and apparently connected by high level of gene flow. Chondrostoma nasus has conserved all major allozyme polymorphisms during its recent range expansion into the Rhone basin. Chondrostoma vardarense from the Axios and Aliakmonas rivers share most of their allozymes with C. nasus from the upper Danube catchment, but have less genetic variation, a possible consequence of a genetic bottleneck following river capture.     

Diet-shifts and food-dependent survival in Engraulicypris sardella (Cyprinidae) larvae from Lake Malawi, Africa

The diet of Engraulicypris sardella (Cyprinidae) larvae wasdeterinmed from the open waters of Lake Malawi, Africa. Theguts of first-feeding larvae of 2–3 mm total length (TL)usually contained many cells of 5–9 µm diametertentatively identified as a non-colonial green alga (Chlorophyta).The number of these cells in the guts of larvae declined aslarvae increased in size, and were not found in larvae greaterthan 9 mm TL. Other types of phytoplankton were rarely seenin the guts of larvae. Copepod nauplii were eaten by larvaegreater than 4 mm TL, and copepodite copepods and cladoceansby larvae greater than 5 mm TL. The biomass of open water crustaceanzooplankton and E.sardella larvae were determined over a 2-yearsampling programme. The mortality rate of E. sardella was negativelycorrelated with zooplankton biomass, but was not significantlycorrelated with the amount of zooplankton food in the guts oflarvae.     

Genetic variation of the cytochrome b gene in the rosy bitterling, Rhodeus ocellatus (Cyprinidae) in Japan

According to conventional views, the rosy bitterling, Rhodeus ocellatus, comprises two subspecies, R. ocellatus kurumeus and R. ocellatus ocellatus, the former being native to Japan whereas the latter was introduced into Japan from China during World War II. To examine the genetic structure of Japanese R. ocellatus, part of the mitochondrial cytochrome b gene from 48 individuals collected from various locations in Japan was sequenced. Three major mitochondrial lineages were found. Based on historical evidence, two of these represent R. ocellatus ocellatus and the third R. ocellatus kurumeus. The existence of two distinct lineages of R. ocellatus ocellatus in Japan suggests at least two colonizations. Some local populations comprised purely R. ocellatus kurumeus, but those from Kashima and Ogori included both subspecies. Because the proportion of R. ocellatus ocellatus in Kashima increased from 1994 to 1995, invasion by R. ocellatus ocellatus into R. ocellatus kurumeus habitats is apparently in progress. Received: April 30, 1999 / Revised: March 22, 2000 / Accepted: December 20, 2000     

Genetic variation in nine Shorea species (Dipterocarpaceae) in Indonesia revealed by AFLPs

Shorea is the largest and most important genus of the Dipterocarpaceae. The genetic diversity and structure of nine Shorea species from two different locations, namely Nanjak Makmur in Sumatra and Sumalindo in Borneo, were evaluated using amplified fragment length polymorphism (AFLP) markers. A total of 274 trees were investigated at 85 polymorphic AFLP loci. Levels of genetic diversity of these species ranged from  = 0.100 for S. acuminata to  = 0.165 for S. blumutensis. The population of rare species S. blumutensis possessed the highest genetic diversity suggesting that geographically restricted species can have levels of genetic variation comparable to closely related widespread common congeners. Analyses of molecular variance revealed that the genetic variation was mainly found among species in both locations (57.7% in Sumatra; 56.3% in Borneo). The unweighted pairgroup method using arithmetic averages dendrogram of all samples revealed an almost complete separation of species. Thus, AFLP markers proved appropriate for phylogenetic studies of Shorea species. Specific markers have been detected showing high-frequency differences among species and between regions within species. Sequence information of these markers can be used to develop specific polymerase chain reaction markers for wood identification. The possibility of interspecific hybridization was discussed.     

Validation of Alburnus timarensis from the Lake Van basin,eastern Anatolia (Teleostei: Cyprinidae)

The Lake Van basin located in eastern Anatolia is inhabited by two species of Alburnus: Alburnus tarichi is a migratory species foraging in the lake and spawning in all tributaries, while A. timarensis is resident in streams and is known only from one tributary of the lake, the Karasu. It could be shown that A. timarensis is a valid species, which is rediagnosed here. Both species are syntopic during the spawning season, but are well distinguished by size, gill raker and lateral line scale counts.     

Genetic population structure of Hemigrammocypris rasborella (Cyprinidae) inferred from mtDNA sequences

The genetic population structure of the small cyprinid Hemigrammocypris rasborella, distributed widely in lowlands of western Japan, was examined using partial sequence data of mitochondrial DNA (mtDNA). Molecular phylogenetic analysis revealed that the populations of the western Kyushu region were markedly differentiated from all eastern populations, such that the groups would be comparable to different species; their divergence was inferred to have occurred in the Late Miocene–Pliocene. Also, a largely divergent mtDNA group (with divergence in the early Pleistocene) was found in the Sanyo and northeastern Shikoku regions, forming a secondary contact zone in the western Kinki with the eastern mtDNA group. To date, these aspects of the population structure of H. rasborella appear to be unique among lowland fishes in western Japan. Deeper understanding of the formation processes of freshwater faunas in western Japan will require further comparisons of the phylogeographic patterns and ecological traits of constituent species.     

Social grouping and genetic variation in common shiners,Notropis cornutus (Pisces,Cyprinidae)

Synopsis Heterogeneous gene frequencies of Est-1 across groups ofNotropis cornutus provide evidence of behaviourally imposed restrictions on stock structuring. Positive fixation indices (F_1S = 0.056 and F_1T = 0.085) were reflected by a deficiency of heterozygotes for pooled groups. The degree of subdivision ofN. cornutus stocks cannot be evaluated with the present evidence. but it is likely that their schooling behaviour is associated with significant genotypic structuring of the species.     

Genetic studies on the Asmat population (Irian-Jaya, Indonesia)

The Asmat are a population of about 35,000 people living on the South-West coast of Irian-Jaya (Indonesia; New Guinea). This paper presents the results of enzyme group and serum protein group typings in a sample of Asmats living in the coastal region around Agats. Red cell enzyme polymorphisms (EaP, PGM1, 6-PGD, EsD, ADA and AK) could be typed in 154 blood samples, serum protein polymorphisms (Ge, alpha 1-AT, PLG, Tf and Hp) in 160 blood samples. The results of this study are discussed in detail.     

Molecular phylogeny of the genus Gobio Cuvier, 1816 (Teleostei: Cyprinidae) and its contribution to taxonomy

The phylogenetic relationships among gudgeons that represent most nominal taxa within Gobio gobio sensu lato were examined by mitochondrial and nuclear genome sequencing. The molecular analyses confirmed the separate generic status of Gobio as a monophyletic group and revealed 15 Eurasian lineages divided into two main clades, the Northern European and the Ponto-Caspian. The validity of eleven nominal taxa as distinct species was confirmed, gudgeons from the Volga River basin were described as a new species G. volgensis, and three revealed phylogenetic lineages were submitted for a comprehensive revision as "species-in-waiting". The species G. gobio showed a wide range extending from the British Isles to the Black Sea coast and overlapped the areas of several other species. Four pure lineages were detected in the middle Danube River basin. The Crimean Peninsula was found to be a region with the occurrence of individuals of hybrid origin. This region will require special investigation to define species participating in hybridization events, and to establish further steps for the conservation of endemic native gudgeon species. A simple diagnostic method, based on different lengths of the PCR products, called "S7indel diagnostics" is presented for further taxonomic investigations in the genus Gobio.     

Early life history of Engraulicypris sardella (Cyprinidae) in Lake Malawi

Engrarulicypris sardella is the basis of an important artisanaland subsistence fishery in Lake Malawi. It is a small pelagiccyprinid growing to a maximum length of 13 cm and is the onlyfish species in the lake known to have pelagic larvae. Seasonalabundance and vertical distribution patterns of larvae wereinvestigated in the offshore pelagic zone from March 1992 toJanuary 1994. There was no evidence that E.sardella is a pelagicspawner. Growth rates were estimated by counting rings on theasteriscus otolith, and biomass and production calculated usinga length-dry weight regression relationship. Distinct seasonalpatterns were observed in the total numbers, biomass, production,and mortality, of larvae that were similar in both years ofsampling. Mortality of larvae was lowest from July to Decemberand highest from January to April. Mortality was, on average,higher in the south of the lake, and lower in the central andnorthern region. Low mortality of larvae coincided with thewindy mixed period when primary and secondary production wereat a maximum, and correlated with an increased focd supply atthis time. It is suggested that the strength of the recruitingpopulation is determined by mortality in the larval phase, ratherthan by the spawning stock biomass Larvae were found to be mostabundant in the upper 50 m of the water column during the dayand were virtually absent below 250 m. Larvae moved down byan average of 50 m at night.     

Genetic diversity in the Japanese rosy bitterling, Rhodeus ocellatus kurumeus (Cyprinidae)

Comparison of meristic characters (pored lateral line scales, vertebrae, and fin rays), and PCR-RFLP analysis in the D-loop and ND1 regions of mitochondrial DNA were performed to estimate the genetic diversity in local populations of the Japanese rosy bitterling, Rhodeus ocellatus kurumeus. In terms of meristic characters, the Fukuoka population was the largest in both range and variance of the number of pored lateral line scales and vertebrae (abdominal and caudal), and Osaka was the second, whereas the Kagawa population showed the smallest range and variance in these characters. In PCR-RFLP analysis, 11 haplotypes (3 in Fukuoka, 2 in Okayama, 2 in Kagawa, and 4 in Osaka) were observed, and nucleotide sequence divergence (NSD) was approximately two times larger in ND1 (mean, 0.61%) than in D-loop (mean, 0.31%). In the neighbor-joining (NJ) tree, based upon the NSD value in ND1, haplotypes were arranged into four clades, which corresponded to the locality of each haplotype. The Fukuoka population was conspicuously apart from the other populations (mean, 0.90% in NSD), but the remaining three showed a similar genetic distance with each other (mean, 0.48%–0.52% in NSD). In haplotype diversity of mtDNA, half the stations in Osaka and all in Kagawa were monomorphic. Especially, two haplotypes endemic to Kagawa were randomly distributed, irrespective of drainages. Rhodeus o. kurumeus in Fukuoka inhabits small rivers and creeks (open water systems), while that in Kagawa and Osaka lives in small ponds (closed water systems). Taking the information of morphology, mtDNA, and habitat into consideration, the low genetic diversity in Kagawa and Osaka populations of R. o. kurumeus is thought to be mainly the result of the isolation of their habitat. Received: January 14, 2001 / Revised: June 14, 2001 / Accepted: July 1, 2001     

Complex chemical variation and the taxonomy of Hymenoxys scaposa (Compositae)

Over 30 flavonoids, some of which are unusual types of flavonols and flavones, occur in the taxaHymenoxys scaposa, H. acaulis, andH. ivesiana. The patterns of distributions of these compounds are correlated more closely with an east-west geographical range than with the formally recognized identity of the plant, as deduced from its morphology. The exact significance of these observations is not yet clear but the chemistry, as now known, suggests that chemical races have evolved semiindependently of morphological races in this group of species, or that complex hybridization may be in progress.