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1.
Forty-nine populations of brook charr (Salvelinus fontinalis) from Algonquin Park lakes and rivers were analysed for mitochondrial DNA variation. Haplotypic distributions of wild fish in the Algonquin Park region of Ontario, Canada, predominantly reflect postglacial dispersal patterns into the region in spite of substantial hatchery plantings. Two major refugial groupings colonized this region. Northern and eastern watersheds (Amable du Fond, Bonnechere, and northern Petawawa), were colonized primarily by haplotype 1 fish (B1 phylogenetic assemblage), while Oxtongue River, southern Petawawa, and York River populations were colonized predominately by fish from the B2 and A mtDNA phylogenetic assemblages. Fish with haplotypes in the A and B2 phylogenetic assemblages are common in the Lake Huron drainage. All watersheds in the Park drain into the Ottawa River, except the Oxtongue drainage (part of the Lake Huron watershed). This suggests that early glacial outflows south of the Algonquin Park region (Kirkfield-Trent) may have been colonized by fish that initially invaded ‘Ontario island’ (south-western Ontario), while fish which invaded northern Algonquin Park were derived from a different refugial grouping(s) which may have involved colonization both up the Ottawa River drainage, and/or from a more westerly (Mississippian) refugial grouping. A majority of the populations in Algonquin Park have been planted with hatchery reared brook charr since the 1940s. The Hills Lake or ‘Domestic’ strain was used almost exclusively for these plantings. Comparisons of mtDNA haplotypic distributions in hatchery and wild fish suggests that hatchery females had minimal spawning success and/or their progeny had poor survivorship in the wild.  相似文献   

2.
Two brood stocks of brook charr, Sulvelinus fontinalis , are currently maintained by the Ontario Ministry of Natural Resources. The Nipigon brood stock originated from Lake Nipigon, in north-central Ontario, while the Hills Lake stock is believed to have been produced by hybridizing several strains (including charr from a Pennsylvania hatchery as well as charr from Ontario) in the past. The mitochondrial DNA (mtDNA) variability of these brood stocks was characterized using 51 hexanucleotide restriction enzymes. Eleven restriction enzymes, Acc I, Am I, Bun I, Bun II, Hind III, Nco I, Nde I, Nhe I, Nsi I, Pst I and Sph I, were polymorphic between the two brood stocks. Eight hatchery mtDNA haplotypes were detected showing a maximum of 0.41 % sequence divergence. Seven haplotypes are present in the Hills Lake strain, and two in the Nipigon strain. These mtDNA haplotypes are useful markers to determine the degree of reproductive success between planted and native fish. In one comparison in southern Ontario, less than 20% of the wild fish sampled from the head water regions of a small drainage entering Lake Erie could have resulted from random introgression with hatchery fish planted further downstream, because most of these fish possessed a unique Acc 1 cut site. This is one of the few examples in stock analysis studies where such a high degree of genetic discrimination is evident between hatchery and native fish.  相似文献   

3.
Declines in the number of anadromous brown trout in the Karup River in Denmark, due to environmental degradation, led to the stocking of large numbers of hatchery trout during the 1980s. This practice was gradually replaced by stocking with the offspring of electrofished local trout The genetic contribution of the hatchery fish to the current population of anadromous trout in the river was estimated by restriction fragment length polymorphism analysis of mitochondrial DNA, using seven restriction endonucleases. Fish from the hatchery strain as well as from five locations in the river system, and from a further unstocked river were screened. Eight haplotypes were observed. The distribution and frequencies of the observed haplotypes revealed little genetic differentiation among stocked populations. The hatchery strain differed significantly from the stocked populations. One haplotype which was found at a high frequency in the hatchery strain was almost absent from the stocked populations. This suggests that the genetic contribution of the hatchery trout to the current population is much less than would be expected from the number of stocked fish. The possible reasons for the failure of the hatchery trout to contribute to the gene pool, and also the implications for conservation biology, are discussed.  相似文献   

4.
The amago salmon, Oncorhynchus masou ishikawae, is an endemic subspecies of O. masou in Japan. Owing to the extensive stocking of hatchery fish throughout Japan, indigenous populations of O. m. ishikawae are now on the verge of extinction. We examined the genetic effects of stocking hatchery fish on wild populations in the River Koza, Japan, using microsatellite and mitochondrial DNA (mtDNA) markers. For mtDNA, haplotype mt1, which is common in wild populations, was present exclusively in isolated wild populations assumed to be unaffected by previous stocking, while it was never observed in hatchery fish. Genetic diversity was much higher in wild populations in the stocked area, which shared many mtDNA haplotypes with hatchery fish, than in isolated wild populations with haplotype mt1. Pairwise F ST estimates based on microsatellites showed significant differentiation among the isolated populations with many microsatellite loci monomorphic. Significant deviation from Hardy–Weinberg equilibrium was observed in wild populations in the area subject to stocking, where a Bayesian-based assignment test showed a high level of introgression with hatchery fish. These results suggest that wild populations with haplotype mt1, which became isolated through anthropogenic environmental change in the 1950–1960s, represent indigenous populations of O. m. ishikawae in the River Koza. They have low genetic diversity, most likely caused by genetic bottlenecks following damming and environmental deterioration, while stocking of hatchery fish over the past 30 years apparently had a large impact on the genetic structure of wild populations in the main channel of the River Koza.  相似文献   

5.
To determine the genetic relationship of anadromous and resident life-history types within and among drainages, and compare several hatchery strains to their progenitor populations, brook charr Salvelinus fontinalis were examined for allozyme and mitochondrial DNA variation. Greater genetic similarity of sympatric anadromous and resident charr was found compared to similar life-history forms allopatrically, suggesting the two life-history types are not reproductively isolated. Low divergence among the mtDNA haplotypes suggests that the two life-history types are members of the same evolutionary lineage. Population differentiation from mtDNA data exceeded that from estimates based on allozymes. Genetic deviations from expectations suggest that the hatchery strains were derived from few individuals.  相似文献   

6.
Mitochondrial DNA (mtDNA) was purified from the Arctic charr, Salvelinus alpinus , the brook charr, Salvelinus fontinalis , and the lake charr, Salvelinus namaycush , and digested with restriction enzymes Ava II, Hinf I, Eco R V, Pst I and Xba I. Two Arctic charr samples were from natural populations and they represented two different morphotypes of Arctic charr. All other studied populations were hatchery maintained. Eight additional restriction enzymes and double digestions were employed to study morphotypes of Arctic charr. We distinguished two morphotypes with restriction enzyme Nci I. Sequence divergence among mtDNA types was 2.9–3.8% between S. alpinus and S. fontinalis , 3.4–4.6% between S. alpinus and S. namaycush , and 4.7–5.3% between S. fontinalis and S. namaycush . lntraspecific variation was lowest in Arctic charr, the average of nucleon diversity for three populations being 0.179, while for brook charr and for lake charr nucleon diversity was 0.334 and 0.550, respectively. According to the number of mtDNA types, it is obvious that introduction to Finland and hatchery propagation have not greatly affected the mtDNA variation of brook charr or lake charr.  相似文献   

7.
Morphological and genetic characteristics are used for the analysis of the origin of charrs from the lakes of the Kolyma basin (Chuk, Gek, Gulyaevskoe-4, Gulyaevskoe-6, and Lenkovoe) and the Sea of Okhotsk basin (Lake Chistoe). In addition to these samples, the fragments of the control region of mitochondrial DNA (CR mtDNA, 550-bp) and exon 2 of recombination activating gene 1 (RAG1, 899-bp) are sequenced in the charrs from lakes Dzhul’etta and Cherechen’ (Kolyma basin) and lakes Elikchanskie, Bol’shoi Mak-Mak, Ueginskoe (Sea of Okhotsk basin), Ulakhan-Silyan-Kyuel’ (Yana River basin) as well as in northern Dolly Varden from the Kamchatka River. The charr from Lake Chistoe is represented by northern Dolly Varden. In the charrs from lakes Chuk, Gek, Gulyaevskoe-4, Gulyaevskoe-6, Lenkovoe, Cherechen’, Elikchanskie, Bol’shoi Mak-Mak, and Ueginskoe, the haplotypes of mtDNA of the Bering group (a haplogroup of northern Dolly Varden) are revealed. Based on the morphological and RAG1 data, populations of charrs from these lakes belong to the Salvelinus alpinus complex. A transfer of mtDNA of northern Dolly Varden to the charrs from the Kolyma and Sea of Okhotsk basins occurred during the last postglacial expansion and subsequent hybridization. Based on the results of morphological and genetic analysis, the charrs from the Kolyma and Sea of Okhotsk basins cannot be unambiguously referred to the phylogenetic groups of Eurasian Arctic charr or Taranets charr. The presence of mtDNA haplotypes of the Arctic group (a haplogroup of Taranets charr) in the populations of lakes Dzhul’etta, Maksi, and Ueginskoe shows a possibility of their belonging to the group of Taranets charr.  相似文献   

8.
Mitochondrial haplotype diversity in seven Portuguese populations of brown trout, Salmo trutta L., was investigated by sequencing the 5' end of the mitochondrial DNA (mtDNA) control region. Five new haplotypes were described for this species, each two to three mutational steps distant from the common north Atlantic haplotype. Significant population subdivision of mtDNA haplotypes was also apparent. Based on these results, as well as on published data describing the distribution of both mtDNA haplotypes and allozyme alleles throughout Europe, the postglacial recolonization of northern Europe was re-evaluated. It is argued that the available data do not support the contribution of two major glacial refugia (southwest Atlantic and Ponto-Caspian Basin) to this postglacial recolonization, as proposed in a recently published model. The unique genetic architecture of Portuguese brown trout within the Atlantic-basin clade of this species represents a highly valuable genetic resource that should be protected from introgression with nonendemic strains of hatchery fish.  相似文献   

9.
Supportive breeding and stocking performed with non‐native or domesticated fish to support sport fishery industry is a common practice throughout the world. Such practices are likely to modify the genetic integrity of natural populations depending on the extent of genetic differences between domesticated and wild fish and on the intensity of stocking. The purpose of this study is to assess the effects of variable stocking intensities on patterns of genetic diversity and population differentiation among nearly 2000 brook charr (Salvelinus fontinalis) from 24 lakes located in two wildlife reserves in Québec, Canada. Our results indicated that the level of genetic diversity was increased in more intensively stocked lakes, mainly due to the introduction of new alleles of domestic origin. As a consequence, the population genetic structure was strongly homogenized by intense stocking. Heavily stocked lakes presented higher admixture levels and lower levels of among lakes genetic differentiation than moderately and un‐stocked lakes. Moreover, the number of stocking events explained the observed pattern of population genetic structure as much as hydrographical connections among lakes in each reserve. We discuss the implications for the conservation of exploited fish populations and the management of stocking practices.  相似文献   

10.
Synopsis Brook charr, Salvelinus fontinalis, shifts its diet from zoobenthos to pelagic prey when living sympatrically with white sucker, Catostomus commersoni, in lakes of the Laurentian Shield. We tested the hypothesis that this diet difference would have a significant impact on their pyloric caecal morphology in 5 lakes containing allopatric brook charr populations and 6 other lakes containing both brook charr and white sucker. We observed that the mean length of the most posterior caecum of charr was significantly greater in sympatry than in allopatry (X ± 1 SD: 9.91 ± 1.12 mm versus 8.44 ± 0.67 mm). This is equivalent to an increase of 18% of total pyloric caecal mass (dry weight) in sympatric brook charr. These results indicate that this response to differences in diet, well known in birds, also occurs in fish.  相似文献   

11.
The early habitat use of age 0 year brook charr Salvelinus fontinalis in three north temperate lakes which differ in terms of shoreline physical habitat is described. In the two lakes, which contained abundant shoreline woody debris and inundated vegetation, brook charr were observed in extremely close proximity with these habitat features, near shore and near the surface. Fish were absent from open areas away from shore unless in close proximity with fallen floating logs near the surface, extending offshore. In a third lake that had no woody debris or inundated shoreline vegetation, brook charr were observed exclusively in close proximity with the shoreline itself, and near the surface. In all three lakes, fish were most closely associated with the shoreline and with woody debris and inundated vegetation (when present) shortly after emergence, and significantly farther from shore and deeper in the water column thereafter.  相似文献   

12.
Wild brook charr populations (Salvelinus fontinalis) completely introgressed with the mitochondrial genome (mtDNA) of arctic charr (Salvelinus alpinus) are found in several lakes of northeastern Québec, Canada. Mitochondrial respiratory enzymes of these populations are thus encoded by their own nuclear DNA and by arctic charr mtDNA. In the present study we performed a comparative sequence analysis of the whole mitochondrial genome of both brook and arctic charr to identify the distribution of mutational differences across these two genomes. This analysis revealed 47 amino acid replacements, 45 of which were confined to subunits of the NADH dehydrogenase complex (Complex I), one in the cox3 gene (Complex IV), and one in the atp8 gene (Complex V). A cladistic approach performed with brook charr, arctic charr, and two other salmonid fishes (rainbow trout [Oncorhynchus mykiss] and Atlantic salmon [Salmo salar]) revealed that only five amino acid replacements were specific to the charr comparison and not shared with the other two salmonids. In addition, five amino acid substitutions localized in the nad2 and nad5 genes denoted negative scores according to the functional properties of amino acids and, therefore, could possibly have an impact on the structure and functional properties of these mitochondrial peptides. The comparison of both brook and arctic charr mtDNA with that of rainbow trout also revealed a relatively constant mutation rate for each specific gene among species, whereas the rate was quite different among genes. This pattern held for both synonymous and nonsynonymous nucleotide positions. These results, therefore, support the hypothesis of selective constraints acting on synonymous codon usage.  相似文献   

13.
The effects of stocking hatchery trout into wild populations were studied in a Danish river, using microsatellite and mitochondrial DNA (mtDNA) markers. Baseline samples were taken from hatchery trout and wild trout assumed to be unaffected by previous stocking. Also, samples were taken from resident and sea trout from a stocked section of the river. Genetic differentiation between the hatchery strain and the local wild population was modest (microsatellite FST = 0.06). Using assignment tests, more than 90% of individuals from the baseline samples were classified correctly. Assignment tests involving samples from the stocked river section suggested that the contribution by hatchery trout was low among sea trout (< 7%), but high (46%) among resident trout. Hybrid index analysis and a high percentage of mtDNA haplotypes specific to indigenous trout observed among resident trout that were assigned to the hatchery strain suggested that interbreeding took place between hatchery and wild trout. The latter result also indicated that male hatchery trout contributed more to interbreeding than females. We suggest that stronger selection acts against stocked hatchery trout that become anadromous compared to hatchery trout that become resident. As most resident trout are males this could also explain why gene flow from hatchery to wild trout appeared to be male biased. The results show that even despite modest differentiation at neutral loci domesticated trout may still perform worse than local populations and it is important to be aware of differential survival and reproductive success both between life-history types and between sexes.  相似文献   

14.
Diel locomotor activity of brook charr, as determined by radiotelemetry   总被引:2,自引:0,他引:2  
Locations by radiotelemetry during eight 24–h sampling periods in 1991, 1992, and 1993 were used to evaluate the diel activity patterns of adult brook charr Salvelinus fontinalis in two lakes of the Laurentian Shield (Québec, Canada). Based on the minimum distance travelled between two consecutive locations, adult brook charr were more active at dusk and at night than during the day. During daylight periods, individual fish displayed strong site selection, remaining in the same area along the shore from day to day. The fish left their inshore position at dusk, were highly mobile during the night, and returned to their focal point at sunrise, exhibiting diel homing behaviour. These results are supported by an increase in gillnet captures of adult brook charr in Lac Melchior at night. Data obtained by gillnet fishing in lakes Bondi and Simpson showed that juvenile (1+) brook charr were active throughout the diel cycle and that young-of-the-year were active mainly during the day, suggesting that there is an ontogenetic change in the diel activity of brook charr. Despite its limitations (restrictions on the number and size of tracked individuals, post-manipulation mortality, lifetime of transmitter battery), radiotelemetry allows for collection of multiple behavioural observations (distances travelled, instantaneous activity, site selection and homing) during the activity cycle of individual fish, and thus provides a finer degree of spatial resolution than alternative methods such as gillnetting.  相似文献   

15.
Empirical studies of natural populations have commonly reported departures from Hardy-Weinberg expected proportions of heterozygote individuals. Recent advances in statistical population genetics now offer the potential to exploit individual multilocus genotypic information to test more rigorously for possible sources of heterozygote deficiencies. In a previous study in lacustrine brook charr (Salvelinus fontinalis), we reported stronger deficits in small than in large lakes. In the present paper, we propose a methodology for empirically testing alternative hypotheses to identify the cause of the deficits observed in three of the smallest lakes (85, 109 and 182 ha) analysed. First, as in several salmonid species, brook charr may exhibit a trophic polymorphism in north temperate lakes. If morphs are genetically divergent, indiscriminate sampling of both forms would result in less heterozygote individuals than expected in a randomly mating population (Wahlund effect). Using an individual-based method aiming at detecting cryptic population structure, we can reject this explanation as the sole source of deficits for all three lakes. Secondly, mating among relatives could also be frequent in small lakes and lead to heterozygote deficiencies. Significantly more fish than expected at random had low individual multilocus heterozygosity in two of the lakes, suggesting that inbred fish may have been present. Thirdly, sampling of genetically related fish would also lead to departures from Hardy-Weinberg proportions. In the same two lakes, the distribution of pairwise relatedness coefficients departed from its random expectation, suggesting that non-random sampling of kin may have occurred.  相似文献   

16.
Shortnose sturgeon is an anadromous North American acipenserid that since 1973 has been designated as federally endangered in US waters. Historically, shortnose sturgeon occurred in as many as 19 rivers from the St. John River, NB, to the St. Johns River, FL, and these populations ranged in census size from 10(1) to 10(4), but little is known of their population structure or levels of gene flow. We used the polymerase chain reaction (PCR) and direct sequence analysis of a 440 bp portion of the mitochondrial DNA (mtDNA) control region to address these issues and to compare haplotype diversity with population size. Twenty-nine mtDNA nucleotide-substitution haplotypes were revealed among 275 specimens from 11 rivers and estuaries. Additionally, mtDNA length variation (6 haplotypes) and heteroplasmy (2-5 haplotypes for some individuals) were found. Significant genetic differentiation (P < 0.05) of mtDNA nucleotide-substitution haplotypes and length-variant haplotypes was observed among populations from all rivers and estuaries surveyed with the exception of the Delaware River and Chesapeake Bay collections. Significant haplotype differentiation was even observed between samples from two rivers (Kennebec and Androscoggin) within the Kennebec River drainage. The absence of haplotype frequency differences between samples from the Delaware River and Chesapeake Bay reflects a probable current absence of spawning within the Chesapeake Bay system and immigration of fish from the adjoining Delaware River. Haplotypic diversity indices ranged between 0.817 and 0.641; no relationship (P > 0.05) was found between haplotype diversity and census size. Gene flow estimates among populations were often low (< 2.0), but were generally higher at the latitudinal extremes of their distribution. A moderate level of haplotype diversity and a high percentage (37.9%) of haplotypes unique to the northern, once-glaciated region suggests that northern populations survived the Pleistocene in a northern refugium. Analysis of molecular variance best supported a five-region hierarchical grouping of populations, but our results indicate that in almost all cases populations of shortnose sturgeon should be managed as separate units.  相似文献   

17.
Arctic charr, Salvelinus alpinus, and brook charr, Salvelinus fontinalis, inhabiting three lakes in the de la Trinité River and adjacent watershed, north shore, Gulf of St. Lawrence, were sampled in 1998. Arctic charr growth differed among lakes with the smallest fish coming from the largest lake. Arctic charr weight–length equation exponents were almost identical at all sample sites. Brook charr growth was also similar in all lakes. July stomach samples from Arctic charr consisted almost entirely of cladocerans in the largest lake, less so in the intermediate sized lake and were mostly aquatic insects in the smallest lake. Brook charr stomach contents were more varied and included fish. Carbon, nitrogen and sulphur stable isotope analyses (SIA) were used to provide a spatially and temporally integrated image of charr diets. SIA corroborated observed among-lake differences and similarities in species diets and suggested lake morphometry may influence measured results. The 15N signature in brook charr muscle increased with fork-length, as a result of a shift towards piscivory with size. The 15N signature in Arctic charr muscle tissue showed a significant negative correlation with fork-length in two of the studied lakes that appears related to dietary niche shifts. Results demonstrate the ability of SIA to detect dietary shifts otherwise unobservable from standard gut content analysis.  相似文献   

18.
Synopsis The emergence chronology of brook charr alevins in the Chikanishing River, Ontario, Canada and the concurrent changes in stream chemistry resulting from acidic snowmelt runoff were examined during the spring, 1986–1988. Emergence patterns were similar among years with the most intense emergence (> 70%) occurring during the declining stream discharge following the spring flood. This period coincided with stream pH depressions (minimum pH 5.2) in 2 of 3 years, suggesting emergence behaviour frequently subjects the earliest free-swimming life interval of brook charr to episodic acidification events.  相似文献   

19.
Synopsis The influence of late spring and summer water temperatures on brook charr, Salvelinus fontinalis, growth and age structure was evaluated from 1984 to 1991 in the Ford River, Michigan. Temperature was monitored and brook charr sampled for vital statistics from late May through September using fyke nets and weirs at four locations within a 25.8 km section of stream. Scale analysis was used to determine captured brook charr age, past length at age and relative annual growth rates. Late spring and summer water temperature patterns varied between years with the greatest variability occurring in May and June. Age and size structure also varied between years and was significantly related to temperature. Years with cooler late spring and summer temperature patterns were dominated by older (age 2 and 3), larger brook charr, while years with warmer spring and summer temperature patterns were dominated by younger (age 1), smaller brook charr. Spring and summer temperature did not appear to have a significant effect on the growth of age 0 or age 1 brook charr. However, temperature was negatively related to brook charr growth from age 2 on. As spring and summer water temperatures are critical to brook charr growth and survival, it is important that a streams thermal regime be considered when establishing management goals for this species.  相似文献   

20.
In winter, brook charr Salvelinus fontinalis demonstrated poor osmoregulatory ability. Saltwater (SW) transfer resulted in sharp increases in plasma osmolality and chloride levels, a decrease in white muscle water content and high mortality. A clear improvement of the hypo-osmoregulatory mechanism e.ciency was observed in spring; by May or June, fish achieved full acclimation within 1 week of SW transfer. In early fall, the time needed to restore osmotic and ionic balance increased once again. A high level of stress was detected only in winter and fall, as indicated by plasma cortisol and glucose concentrations. Great improvement in osmotic and ionic regulation was observed when brook charr were transferred to 80 C SW in February and April while impaired SW adaptability was recorded in individuals transferred to 2·50° C SW in June and August. Temperature itself was more important than a thermal gradient between fresh and salt water. Stress indicators substantiate this temperature-dependent improvement of osmotic and ionic regulation in brook charr. The results support the hypothesis of a minor contribution of cortisol to hypo-osmotic regulation in brook charr, as the cortisol response always seemed to be associated with stress in the experiments.  相似文献   

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