Comparison of baited remote underwater video stations (BRUVS) and prawn (shrimp) trawls for assessments of fish biodiversity in inter-reefal areas of the Great Barrier Reef Marine Park

A field comparison of baited remote underwater video stations (BRUVS) and prawn (shrimp) trawls was made to assess the sampling options for describing patterns of fish biodiversity in the lagoonal waters of the Great Barrier Reef Marine Park. Replicated comparisons were made during the day and night on trawl grounds with different biophysical characteristics. Each trawl was made close and parallel to a long-shore set of five BRUVS set at regular intervals along one nautical mile. For each species, the sum of the maximum number of fish sighted on BRUVS at any one time (∑MaxN_{1, …, 5}) was compared with the number of fish caught in trawls (N).The two techniques recorded significantly different components of the fish fauna on the trawl grounds. Trawls caught mainly small (≤300 mm), sedentary or cryptic, demersal species—such as flatfishes, apogonids, synodontids, triglids and callionymids. The BRUVS recorded more larger, mobile species from a much wider size range of families, including large elasmobranchs, more fusiform pelagic species (such as carangids and scombrids), and numerous eels. Species accumulation curves were parallel and very similar in shape for both techniques, but were separated by about 11 extra species in trawls. Fifty-two species in 17 families were caught only in trawls and 38 species in 15 families were recorded only by BRUVS. The occurrence of 38 small mobile species in 21 families was common to both techniques, but most of these showed marked differences in relative abundance. Trawls recorded higher species richness at all sites, and at night, but the average number of species and individuals recorded per transect were only about 26% and 19% lower for the BRUVS. The BRUVS consistently recorded more species during the day than trawls, and are limited most by water clarity. Multivariate analyses showed that both techniques indicated the presence of six fish assemblages based on day and night in three locations, despite sampling quite different components of the fauna. The six assemblages accounted for 78.9% of the variation in the BRUVS data compared to 68.9% of the variation in the trawl data, and there was a lower error rate in discriminating the six assemblages in the BRUVS data.BRUVS are non-extractive and can be used on complex topographies and in sensitive habitats in most or all zones of the Marine Park, but models of bait plumes are needed to convert fish sightings to density estimates. They may have a particular role in studies of larger, rarer elasmobranchs and teleosts of special conservation interest. Trawls can be used in any level of water clarity and provide direct estimates of fish density, particularly those smaller teleosts most vulnerable to the effects of trawling. The complementary use of prawn trawls and BRUVS would enable a more comprehensive assessment of teleost and elasmobranch diversity in the variety of inter-reef seabed topographies and management zones comprising the Marine Park.     

Gear technology in <Emphasis Type="Italic">Nephrops</Emphasis> trawl fisheries

Nets with a small mesh size are required to catch Nephrops norvegicus, consequently large quantities of small whitefish are also caught, and much of this bycatch is undersized and is discarded dead. The main bycatch species are whiting (Merlangius merlangus), haddock (Melanogrammus aeglefinus) and cod (Gadus morhua). Here we summarize the known behavioural reactions of these species towards conventional trawls and review the results of using different trawl modifications to increase selectivity of Nephrops trawls. The trawl modifications are categorised as separator grids, separator and guiding panels, square-mesh panels, capture avoidance designs and codend modification. Finally, the extent to which these developments have been legislated for is discussed including the conditions under which new gear regulations have been introduced. Haddock and whiting rise during the trawling process facilitating their separation from Nephrops and escape, however the behaviour of small fish of these species is less consistent. Cod and Nephrops remain on bottom of the trawl, so to separate these species requires some physical filtering process. Overall, there is currently sufficient technical ability to improve selectivity in Nephrops trawls. The design of choice is dependent on the objectives of managers; for reducing discards but retaining marketable fish, square-mesh panels offer the most useful tool; to eliminate all bycatch and create a single-species fishery, grids and traditional Nephrops trawls show most potential. Whatever the objectives of the new measures, it is likely that a short-term economic impact will follow, and some form of incentive may be required to implement effective measures. A voluntary uptake of new measures by industry is preferable, however, to date, restrictions on fishing opportunities have been necessary to introduce innovative gear designs.     

Recovery by the Norway lobster Nephrops norvegicus (L.) from the physiological stresses of trawling: Influence of season and live-storage position

Live Norway lobsters (Nephrops norvegicus L.) were trawled at depths of 30 to 55 m off the coast of Jutland (Denmark) in late winter (March) and in summer (August) in 2006. Water temperatures at the bottom and surface of the sea were 7 °C and 2 °C during the winter, and 12 °C and 21 °C in the summer, respectively. The recovery of specific physiological and metabolic variables from the intense stresses associated with capture (trawling and air-exposure during sorting) was followed in seawater at 5 °C in winter or 18 °C in summer. Recovery was compared in lobsters held individually in two different live-storage positions, either resting vertically on the tail or sitting horizontally. In winter, many animals were alive when brought on board and approximately 86% were still alive at the end of experimentation (96 h). In summer very few animals were alive when brought on board and, of these, approximately 95% were dead at 24 h. When compared with values measured in laboratory controls, the stresses of capture elicited very high haemolymph lactate contents in both seasons, although levels recovered within 24 h. Trawling also caused very high haemolymph glucose concentrations, which differed with season. In winter, haemolymph glucose was elevated for 24 h to levels significantly higher than in summer. In summer, glucose had returned to control levels by 4 h. At 4 h after trawling, haemolymph O₂ status was not markedly influenced in either season, but there were significant disturbances of acid-base status. In winter, a potential metabolic lactic acidosis was compensated by a marked respiratory alkalosis, with significantly increased haemolymph pH and decreased CO₂ total content and partial pressure. These effects disappeared gradually over 96 h. Summer lobsters showed combined metabolic and respiratory acidosis at 4 h, although this had recovered to control values in the small number of survivors sampled at 24 h. The capture stresses elicited very high haemolymph crustacean hyperglycaemic hormone (CHH) titres, significantly higher in summer than in winter. In winter, CHH titre had declined significantly at 24 h, whereas it exhibited a further significant increase at 24 h in summer. Live-storage position had no significant effect on survival or recovery from capture stresses in either season. The results demonstrate that Nephrops were much more stressed by trawling at high summer temperatures and had difficulty recovering from this, with pronounced negative effects on their survival, irrespective of their live-storage position.     

Morbidity and mortality in Norway lobsters, Nephrops norvegicus: physiological, immunological and pathological effects of aerial exposure

A multivariate approach has been used to study progression in the post-capture condition of trawl-caught Nephrops norvegicus destined for the live transport market. A range of biochemical (L-lactate, glucose, glycogen), endocrinological (crustacean hyperglycaemic hormone), immunological (total haemocyte counts, phenoloxidase), microbiological and pathological measures of condition were utilised. During prolonged periods of aerial exposure N. norvegicus experience large disruptions to the carbohydrate profile, with increases in haemolymph L-lactate and crustacean hyperglycaemic hormone concentrations, and corresponding fluctuations in haemolymph pH; the severity of this disruption increases with the temperature of aerial exposure. This in turn impacts on the immune competence of the lobsters, with significant reductions in the number of circulating haemocytes and phenoloxidase levels observed as well as increases in the degree of bacteraemia of the haemolymph. Utilising evidence obtained during histological and other studies, possible causes of the immuno-suppression and subsequent meat spoilage are discussed. The information obtained should help to identify critical periods in the post-capture period that promote poor stock condition and mortality. Such data may be used to generate an internationally accepted Code of Practice for the capture, handling and transport of commercially exploited decapod crustaceans.     

The use of drop traps to estimate the efficiency of two beam trawls commonly used for sampling juvenile flatfishes

The efficiencies of a 2-m and a 1·5-m beam trawl for catching newly settled flatfish and brown shrimp were compared with that of a 1-m² drop trap that was assumed to be 100% effective. Low and variable trawl efficiencies were recorded but the trawls were not size selective within the size range of individuals captured.     

Subsurface behavior of bottlenose dolphins (Tursiops truncatus) interacting with fish trawl nets in northwestern Australia: Implications for bycatch mitigation

Most studies of delphinid‐trawler interactions have documented the surface behavior of dolphins feeding on discarded bycatch, but not their subsurface behavior around demersal trawl gear. Using video cameras mounted inside trawl nets, we recorded the subsurface behavior of common bottlenose dolphins (Tursiops truncatus) in a demersal fish trawl fishery in northwestern Australia. Footage from 36 trawls across the fishery was analyzed to determine the extent of dolphin‐gear interactions and the behavior of dolphins inside the nets. Interaction rates were high, with dolphins present inside and outside the nets during 29 and 34 trawls, respectively, and for up to 99% of the trawl duration. The proportion of foraging behaviors exhibited inside the nets was higher than the proportions of traveling and socializing behaviors. Twenty‐nine individuals were identified inside the net, seven of which returned repeatedly within and between trawls and fishing trips, but were observed primarily in the same localized areas in which they were first recorded. Our results suggest that entering trawl nets may be a frequently occurring, yet specialized behavior exhibited by a small subset of trawler‐associated dolphins. We propose that gear modifications, not spatial or temporal adjustments to fishing effort, have the greatest potential to reduce dolphin bycatch.     

Physiological changes in the Norway lobster Nephrops norvegicus (L.) escaping and discarded from commercial trawls on the West Coast of Scotland: II. Disturbances in haemolymph respiratory gases, tissue metabolites and swimming performance after capture and during recovery

The physiological states of trawled and creel-caught (control) Norway Lobsters (Nephrops norvegicus (L.)) captured on grounds off the West Coast of Scotland (120–150 m) were compared. Undersized “discards” (<25–35 mm carapace length) were sampled directly from the cod-end and following recovery in underwater (u/w) cages at a mean depth of 24 m. “Escaped” animals which had passed through the cod-end meshes and collected in a small-meshed net “cover” were transferred without emersion (air-exposure) for sampling on-board. Some of these individuals were also transferred by SCUBA divers to u/w cages. Haemolymph PO₂, PCO₂ and pH measurements showed that both discarded and escaped animals experienced moderate internal hypoxia, hypercapnia and acidosis which became severe after 1 h emersion of the former on deck. A marked handling effect was evident in which haemolymph PO₂ declined and PCO₂ became elevated in both controls and recovering trawled animals. In both discarded and escaped animals haemolymph l-lactate and d-glucose concentrations were high compared to controls, but with levels significantly lower in escapes suggesting less tail-flip swimming activity within the cod-end cover. Further emersion had little effect on haemolymph l-lactate in discards. Recovery to control levels of both metabolites occurred within 24 h in u/w cages but the exercising of captured individuals (by tactile stimulation) produced further significant increases. Abdominal flexor muscle concentrations of l-lactate were also elevated in discards and escapes and positively correlated with haemolymph levels. Muscle glycogen showed severe depletion in both groups compared to unexercised controls and 1 h emersion reduced levels drastically (to 20% of normal concentrations). High haemolymph ammonia (T_amm) was characteristic of both trawled groups but was reduced rapidly during recovery. These metabolite changes were accompanied by reductions in the number of escape swimming tail-flips that could be elicited before exhaustion, particularly in discards. This reduction in performance was evident in discards even after 24 h recovery, but escapes showed almost normal responses. The severity of the physiological stresses experienced during trawling, and to a lesser extent in escaped animals, and their effects on recovery of undersized discards regaining the seabed, is discussed. These findings may help us predict the survival, longer-term recovery and fitness of fished N. norvegicus, and their potential contribution to the regeneration of exploited populations.     

Fishes of the Bellingshausen Sea and Peter I Island

The unknown benthic ichthyofauna of the Bellingshausen Sea was analysed. Some data concerning the ichthyofauna of Peter I Island were also included. A total of 583 specimens belonging to 32 species were collected mainly by an Agassiz trawl and baited traps set between 86 and 1,947 m depth. A total of 72.2% of the specimens (89.0% of them Nototheniidae) were caught with the Agassiz trawl, whereas 27.8% of the individuals (90.1% of them Zoarcidae) were captured with traps. The Bellingshausen Sea ichthyofauna was dominated by Zoarcidae (43.9% of individuals, 35.8% by weight) and Nototheniidae (43.0 and 15.2%, respectively). Twenty-two of the 23 species captured in the Bellingshausen Sea are reported for the first time from this area. Trematomus scotti was the dominant nototheniid in the Bellingshausen Sea whereas Lepidonotothen larseni was dominant off Peter I Island.     

Biological features of the common fish species in Olyutorsky-Navarin region and the adjacent waters of the Bering Sea: 1. Gadidae (cods) family

Biological features of the three common fish species, pollock Theragra chalcogramma, Pacific cod Gadus macrocephalus, and saffron cod Eleginus gracilis (Gadidae), have been studied using a 20-year dataset (1995?2015). These species inhabit the northwestern Bering Sea in the summer–autumn period and form the schoolings in Olyutorsky-Navarin region. The size–age parameters, as well as the peculiarities of the body length and body weight dynamics, spawning periods, spawning range, and conditions, of the fish caught by different sampling gear have been analyzed. Due to the construction peculiarities and catch efficiency of the different catching gear, the largest specimens are found in the setlines and snurrevads; the fish caught by the trawls are characterized by the smallest size. The body length and body weight of pollock is greater in the pelagic trawl catches compared to the bottom trawl catches. The abundant brood of Gadidae may well be tracked on the multiyear dynamics graphs reflecting the size distribution, as well as by the decrease of biological parameters of the fish. The studied species inhabit the vast growth areas, so smaller body size of them in the coastal waters may be a result of a high ratio of the young specimens there.     

Environmental life cycle assessment of Norway lobster (<Emphasis Type="Italic">Nephrops norvegicus</Emphasis>) caught along the Swedish west coast by creels and conventional trawls—LCA methodology with case study

Background, aim, and scope  Two fishing methods, creeling and conventional trawling, are used to target Norway lobster (Nephrops norvegicus), economically the second most important species in Swedish west coast fisheries. The goal was to evaluate overall resource use and environmental impact caused by production of this seafood with the two different fishing methods using life cycle assessment (LCA) methodology. Materials and methods  The inventory covered the entire chain starting by production of supply materials and the fishery itself, through seafood auctioning, wholesaling, retailing, to the consumer. That portion of the life cycle occurring on land was assumed to be identical for Norway lobsters regardless as to how they were caught. The functional unit was 300 g of edible meat (i.e., Norway lobster tails), corresponding to 1 kg of whole, boiled Norway lobsters. The seafloor impact of trawling was quantified using a recently developed methodology. Results  Major differences were found between the fishing methods with regard to environmental impact: creeling was found to be more efficient than conventional trawling in all traditional impact categories and in the two additional fishery-related categories involving seafloor impact and discarding. Since the quality of the creel-caught Nephrops was higher, the difference was probably even higher than indicated here. Discussion  Major improvement potential was identified in the more widespread use of creels and species-selective trawls. The only deficiencies of creel fishing were poorer working environment and safety, and a potentially higher risk of recruitment overfishing. However, these issues could be handled by technological development and fisheries regulations and should not hamper the development of creel fishery. Conclusions  Improvement options were identified and quantified for the Swedish Nephrops fishery. The study demonstrates how LCA can be used to compare the environmental performance of different segments of a fishery. Recommendations and perspectives  Shifting to creeling and species-selective trawling would lead to considerably lower discard, fuel use, and seafloor impact while providing consumers with the same amount of Norway lobsters. Electronic supplementary material  The online version of this article (doi:) contains supplementary material, which is available to authorized users.     

The effects of the metal ions Mn2+ and Co2+ on muscle contraction in the Norway lobster Nephrops norvegicus (L.)

The effects of the metal ions manganese and cobalt on force production by the abdominal superficial flexor muscle of the Norway lobster, Nephrops norvegicus, have been studied in response to both neuronal stimulation and electrical field stimulation applied to an isolated neuromuscular preparation, and by selectively blocking synaptic transmission with ivermectin. In response to both forms of stimulation, low concentrations of manganese added to the standard N. norvegicus saline increased the contractile force produced by the muscle, whereas higher concentrations of manganese inhibited both responses in a dose-dependent manner, until force was completely abolished at concentrations above 2.9 mM manganese. Cobalt ions produced similar effects, and no significant difference was found between the concentration of the two ions at 50% force inhibition (K_m) or between the two stimulation methods (manganese: 1.22 mM; cobalt: 1.29 mM, P = 0.86). This suggests that they have a similar mode of action, and a postsynaptic site of inhibition. These K_m values are considerably higher than the concentrations of these ions known to accumulate in the haemolymph of N. norvegicus under eutrophic conditions, and it therefore seems unlikely that accumulations of manganese or cobalt ions under such conditions would cause any significant inhibition of muscle contraction force. Accepted: 28 April 1999     

An endogenous activity rhythm and the rhythmicity of catches of Nephrops norvegicus (L).

Field and laboratory studies were carried out with Nephrops norvegicus (L.) collected from depths ranging from 10 to 184 m off the west coast of Britain. An endogenous circadian rhythm of locomotor activity was exhibited by prawns from all depths when kept under constant conditions in the laboratory. The rhythm was expressed as nocturnal activity mainly within the burrow, though the prawns repeatedly vacate the experimental burrow during the same period. If, as seems likely, prawns in the field also show burrow-orientated locomotor activity at night this would explain why they are caught in smaller numbers when on commercial fishing grounds attempts are made to trawl them during darkness.Peak catches in trawls occur at differing times of day according to depth, and other workers have suggested that this reflects emergence from burrows at optimal light intensities. Present laboratory experiments show that there is no endogenous basis for a distinct ‘emergence’ rhythm. They suggest that high catches at different times of day at different depths are determined by exogenous factors but not solely by some optimal light intensity. It was not possible to induce emergence from artificial burrows by exposing prawns to light intensities within the presumed optimum range for their depth of capture. Dusk and dawn changes of light intensity may have direct effects upon activity, and light may also have an indirect effect by controlling the availability of suitable food organisms and predators. Light may also have a direct effect by suppressing emergence around midday in intermediate depths, particularly in view of the poor or non-existent light-adapting responses of the retinal shielding pigments.     

Biological features of the common fish species in Olyutorsky-Navarin region and the adjacent waters of the Bering Sea: 2. Families Macrouridae,Clupeidae, and Osmeridae

Biological features of the four common fish species, giant grenadier Albatrossia pectoralis (Macrouridae), Pacific herring Clupea pallasii (Clupeidae), Pacific rainbow smelt Osmerus mordax dentex, and Pacific capelin Mallotus villosus catervarius (Osmeridae), were studied under the 20-year dataset (1995?2015). These species inhabit the northwestern Bering Sea in the summer–autumn period and form the schoolings in the Olyutorsky-Navarin region. The size–age parameters of the fish caught by different sampling gear, as well as the peculiarities of the body length and body weight dynamics, spawning periods, spawning range, and conditions, were analyzed. The largest specimens of giant grenadier, Pacific herring, and Pacific rainbow smelt were observed in the catches performed by the bottom setline and the gill nets; the smallest fish were found in the trawl catches. The body length and body weight of Pacific herring were larger in the pelagic trawls compared to the bottom trawls; an opposite pattern was observed for the Pacific capelin. The abundant year-class in the species with short life cycle (capelin and herring) is well tracked on the longterm plots of the fish body size; this is accompanied by the decrease of their biological parameters. Herring stock covers large growing grounds; smaller body size was observed for the herring grazing in the coastal waters; young specimens dominate here.     

Shrimp (Decapoda,Natantia) occurrence and distribution in the eastern Weddell Sea,Antarctica

Summary 108 successful ground and Agassiz trawl catches were taken between 155 and 2031 m depth in the eastern Weddell Sea on board RV Polarstern in spring and summer (October–February) 1985–1989. In addition, 7 hauls were taken with a semipelagic trawl. Only 19 hauls (16.5%) contained no shrimps. The others yielded large numbers of Notocrangon antarcticus, Chorismus antarcticus, and Nematocarcinus lanceopes as well as 20 Lebbeus antarcticus and 11 specimens of an Eualus species new to science. 8 Pasiphaea scotiae were caught in a pelagic krill trawl. No reptant decapod crustaceans were detected in the study area. Shrimp densities determined from trawl catches were lower than estimates derived from underwater photography but in the same order of magnitude. Although yields of the three common shrimp species in some cases exceeded 20 kg per 0.5 h haul, shrimp stocks in the area cannot be considered to be of commercial significance. A wider geographical distribution and greater frequency of shrimps in high Antarctic waters was found than described hitherto. There was considerable variation in numbers, sex composition, occurrence at different depths, and size-frequency distributions. C. antarcticus and N. antarcticus grow to a larger size compared with individuals from the Antarctic Peninsula area. Within the area of investigation, length frequency distributions are skewed towards larger sizes at higher latitudes. In the eastern Weddell Sea larger specimens of the three common species live at greater depths than smaller individuals. Potential reasons for these differences are discussed.AWI Publication No. 124     

Genome-wide identification of the targets for genetic manipulation to improve l-lactate production by Saccharomyces cerevisiae by using a single-gene deletion strain collection

To identify genome-wide targets for gene manipulation for increasing l-lactate production in recombinant Saccharomyces cerevisiae strains, we transformed all available single-gene deletion strains of S. cerevisiae with a plasmid carrying the human l-lactate dehydrogenase gene, and examined l-lactate production in the obtained transformants. The thresholds of increased or decreased l-lactate production were determined based on l-lactate production by the standard strain in repetitive experiments. l-lactate production data for 4802 deletion strains were obtained, and deletion strains with increased or decreased l-lactate production were identified. Functional category analysis of genes whose deletion increased l-lactate production revealed that ribosome biogenesis-related genes were overrepresented. Most deletion strains for genes related to ribosome biogenesis exhibited increased l-lactate production in 200-ml batch cultures. We deleted the genes related to ribosome biogenesis in a recombinant strain of S. cerevisiae with a genetic background different from that of the above deletion strains, and examined the effect of target gene deletion on l-lactate production. We observed that deletion of genes related to ribosome biogenesis leads to increased l-lactate production by recombinant S. cerevisiae strains, and the single-gene deletion strain collection could be utilized in identifying target genes for improving l-lactate production in S. cerevisiae recombinant strains.     

At‐vessel mortality of skates (Rajidae) taken in coastal fisheries and evidence of longer‐term survival

Data on the vigour and at‐vessel mortality (AVM) of 6798 skates (comprising Raja clavata n = 6295; R. brachyura n = 208; R. undulata n = 185, R. montagui n = 98 and R. microocellata n = 12) captured by commercial fishing vessels in the inshore waters of the southern North Sea and English Channel were recorded. AVM in longline fisheries averaged 0·44% across five vessels (0–1·47%), although skates were usually unhooked manually and did not usually pass through a bait‐stripper. AVM in otter trawls averaged 0·76% (0–2·35%), from four vessels fishing with tow durations of <1·5 h (southern North Sea) or 1–4 h (English Channel). No AVM was noted for skates taken as a by‐catch in drift trammel nets (soak times <4 h). Anchored tangle nets resulted in an overall AVM of 2·0–2·7%, but increased from 1·47% (13–28 h soak time) to 6·16% (42–53 h soak time). There were significant differences in the vigour of skates between gears, with R. clavata caught by longline and tangle nets in better condition than those captured by otter trawl or drift trammel net. Similarly, R. undulata caught by tangle net were in better condition than those caught by otter trawl. The vigour of R. undulata was also found to be higher than other skate species for both trawl and tangle net. In total, 5283 skates were tagged with Petersen discs and released, with recapture rates for the various combinations of vessel and gear ranging up to 24·8% for R. clavata. Whilst confirming a degree of post‐release survival, quantitative estimates of post‐release mortality for skates remain unknown.     

Iron contributes to the antibacterial functions of the haemolymph of Galleria mellonella

Studies with Galleria mellonella larvae and the iron chelating agent EDDA showed that iron was essential for the removal of dead Xenorhabdas nematophila and Bacillus subtilis from the haemolymph. The delay in removal of the bacteria from the iron-restricted haemolymph was attributed to reduced adhesiveness of the haemocytes and prophenoloxidase activity. Iron augmentation returned these activities to control levels. Whereas dead B. subtilis had no effect on the concentration of ferrozine-detectable iron (henceforth iron) in the haemolymph, dead X. nematophila was associated with substantially lower levels of iron as the number of damaged haemocytes increased. Haemocyte lysate lowered the concentrations of iron in both FeCl₃ solutions and deproteinized larval serum independent of serum lipids. Haemocyte lysate added to tryptic soybroth lowered the level of iron and limited the growth of X. nematophila. X. nematophila limited iron availability in the plasma by releasing lipopolysaccharides; such a mechanism may be a means of impairing the antimicrobial defences of the insects.     

An initial assessment of sampling procedures for juvenile pallid sturgeon in the Missouri River downstream of Fort Randall Dam, South Dakota and Nebraska

We compared the effectiveness of passive gill nets, hoop nets, set lines, and drifted trammel nets, towed beam trawls and otter trawls to develop criteria to best determine the mean catch per unit effort (CPUE) for juvenile pallid sturgeon (Scaphirhynchus albus) based on selectivity and seasonal efficiency in various habitats of the Missouri River downstream of Fort Randall Dam, South Dakota. Sampling occurred from April to November in 2003 and 2004 and from March to November in 2005. We captured 29 juvenile pallid sturgeon in a total of 498 overnight gill net sets, 55 in 870 drifted trammel nets, 19 on 1683 set lines, and six in 166 otter trawl tows. No pallid sturgeon were captured in 515 beam trawl tows or 520 overnight hoop net sets. Seasonal trends in mean CPUE were found and the relative precision was the greatest in October and November for gill nets, in August for trammel nets, in April for set lines, and in October for otter trawls. A higher proportion of pallid sturgeon captures for gill nets were in the inside bend macrohabitat generally associated with lower water velocities, trammel nets over sand substrate and in the outside bend macrohabitat typically associated with higher water velocities and greater depths, set lines in lower water velocities, and otter trawls in depths >2.5 m and over sand substrate. Although we found trends among seasons and habitats for gill nets, trammel nets, set lines, and otter trawls, the catch rates were low and annual point estimates of relative abundance are not adequate to detect changes in relative abundance of juvenile pallid sturgeon in this reach of the Missouri River. Independently, gill nets, trammel nets, and otter trawls likely captured the size structure of the population of pallid sturgeon in the Missouri River downstream of Fort Randall Dam. Based on our results, a standardized protocol can now be established to systematically monitor juvenile pallid sturgeon, an essential element for determining responses to recovery efforts in the Missouri River.     

Alteration of burrow‐related behaviour of the norway lobster,nephrops norvegicus during infection by the parasitic dinoflagellate hematodinium

This study has used time‐lapse video recordings to analyze the burrow‐related behaviour of N. norvegicus under a 12 h light: dark regime in aquarium conditions, and compared this with the behaviour of lobsters infected by the parasitic dinoflagellate Hematodinium. Uninfected lobsters performed a higher number of burrow departures, of longer duration, during the hours of darkness than during the light. Infected lobsters performed a relatively constant number of departures of similar‐duration in the light and the dark periods. However, the mean number of departures per day performed by infected lobsters (70 day^‐1) was more than double that of uninfected lobsters (30.1 day^‐1), while the mean duration of burrow departures performed by infected lobsters (258.5s departure^‐1) was more than six times greater than in uninfected lobsters (38.7s ? departure^‐1). This led to a more than ten‐times increase (from 1.7 to 19.4%) in the percentage of the day spent out of the burrow by infected lobsters. This altered burrow‐related behaviour could be due to the nutritional demands of the parasites on infected lobsters, causing an increased requirement to forage, or alternatively to a ‘functional hypoxia’, due to the additional respiratory demands of the parasite, causing the host to emerge from the burrow onto the sediment surface to seek oxygen. Implications for the increased time spent out of the burrow are discussed in relation to availability of infected lobsters by trawlers and predators, and to the use of infection prevalence data from trawl‐caught samples in stock assessment models for N. norvegicus.