High levels of liver antioxidants are associated with life-history strategies characteristic of slow growth and high survival rates in birds

Antioxidants have a large potential to coevolve with life-histories because of their capacity to counteract the negative effects of free radicals on fitness. However, only a few studies have explored the association between antioxidant levels and life-history strategies comparing a large number of species. Here we used an extensive dataset of 125 species of birds to investigate the association between concentrations of antioxidants (carotenoids and vitamin E) in the liver, which is the main storage organ for fat-soluble antioxidants, and life-history and morphology. We found that high liver antioxidant concentrations were associated with life-history strategies characterized by "live slow, die old", in clear contrast to previous studies reporting a relationship between high plasma antioxidants and life-histories characterized by "live fast, die young". Thus, high carotenoid concentrations were present in species with large body, brain and egg sizes, high absolute metabolic rate and a resident lifestyle, while high vitamin E concentrations were present in species with large brain size and long life span and incubation period. Our results indicate that antioxidants and life-histories coevolve, and that this may be mediated by positive fitness consequences of the accumulation of liver antioxidants, as species with higher antioxidant levels live longer.     

Explaining density-dependent regulation in earthworm populations using life-history analysis

At present there is little knowledge about how density regulates population growth rate and to what extent this is determined by life-history patterns. We compared density dependent population consequences in the Nicholsonian sense based on experimental observations and life-history modeling for the earthworms Lumbricus terrestris and Eisenia fetida . Both species differ in their life-histories, L. terrestris being a relatively long-lived species with slow reproduction and occurring at low densities compared to E. fetida which has a more opportunistic strategy with a high reproductive output. E. fetida is able to colonise new habitats rapidly and may occur at relatively high population densities. Density dependency of population growth rate was estimated by incorporating density dependent effects on reproduction and growth using a modified Euler equation. The results point out that E. fetida was not as strongly impacted by density as compared to L. terrestris . Population growth rate in E. fetida was hardly affected at low and moderate density, being reduced only at high level, this compares to L. terrestris where even relatively small density effects resulted in a strong negative effect on population growth rate. Our findings indicate that density-dependent regulation in earthworms can be quantified using life-history analysis. The outcomes are in agreement with empirical field observations for populations (i.e. L. terrestris occurs ar low density, E. fetida at high density). Consideration of the potential importance of Nicholsonian density dependence for field populations of these two species in light of their known biology however produces counterintuitive conclusions. In E. fetida , although density tolerant, rapid population growth may mean this species may be subject to density dependeny regulation. In L. terrestris , although density sensitive, complex behavioural ecology (surface activity, territoriality) may limit of feedback influence on population size.     

How seasonal variations in birth and transmission rates impact population dynamics in a basic SIR model

The changing climate is expected to alter the timings of key events in species life-histories. These shifts are likely to have important consequences for infectious disease dynamics, as the distribution and abundance of host species will lead to a different environment for parasites. Previous work has shown how seasonality in single host traits - most commonly the reproduction rate or transmission rate - can lead to an array of complex epidemiological dynamics, including chaos and multiple-stable states, with changes to the timing and amplitude of the seasonal peaks often driving drastic changes in behaviour. However, more than one life-history trait is likely to be seasonal, and changing environmental conditions may impact each of them in different ways, yet there have been few studies of host-parasite dynamics that include more than one seasonal trait. Here we examine a Susceptible-Infected-Recovered epidemiological model in which both reproduction and transmission exhibit seasonal fluctuations. We examine how the amplitude and timing of these seasonal peaks impact disease dynamics. We show that the relative timing of the two events is key, with the most stable dynamics when births peak a few months before transmission. We also show that chaotic dynamics become more likely when transmission in particular has a high amplitude, and when baseline transmission and virulence are high. Our results emphasise the importance of seasonality and timing of host life-history events to disease dynamics.     

Cultivation legacies alter soil nutrients and differentially affect plant species performance nearly a century after abandonment

Cultivation legacies affect native vegetation in old fields of the Great Basin, USA for nearly a century after these fields are abandoned. We hypothesized that cultivation lowered soil nutrients and that this legacy would differentially impact plant performance of four representative Great Basin species. To test these hypotheses, we compared soil nutrients (C, N, P, K, Mg and Ca) between two formerly cultivated and adjacent noncultivated sites in two soil series. We then compared the plant growth and foliar nutrient content of an exotic grass (Bromus tectorum L.), two native grasses (Elymus elymoides [Raf.] Swezey and Achnatherum hymenoides [Roem. and Schult.] Barkworth), and a native forb (Sphaeralcea grossulariifolia [Hook. and Arn.] Rydb) grown in these soils in the greenhouse and in the field. Only one sampling site had reduced soil nutrients associated with cultivation legacies, where most of the negative effects on plant performance were found. E. elymoides appeared to be less affected by cultivation legacies than did A. hymenoides, which had a reduced survivorship and 20 % less above-ground biomass in cultivated soils. No species, including B. tectorum, were favored by cultivation. Our findings suggest that cultivation legacies can affect plant performance of different species in different ways and that altered soil nutrients may interact with other abiotic and biotic cultivation legacies in complex ways.     

Evolution of host resistance to parasite infection in the snail–schistosome–human system

The evolutionary strategies that emerge within populations can be dictated by numerous factors, including interactions with other species. In this paper, we explore the consequences of such a scenario using a host-parasite system of human concern. By analyzing the dynamical behaviors of a mathematical model we investigate the evolutionary outcomes resulting from interactions between Schistosoma mansoni and its snail and human hosts. The model includes two types of snail hosts representing resident and mutant types. Using this approach, we focus on establishing evolutionary stable strategies under conditions where snail hosts express different life-histories and when drug treatment is applied to an age-structured population of human hosts. Results from this work demonstrate that the evolutionary trajectories of host-parasite interactions can be varied, and at times, counter-intuitive, based on parasite virulence, host resistance, and drug treatment.     

Antioxidant defenses predict long-term survival in a passerine bird

Background

Normal and pathological processes entail the production of oxidative substances that can damage biological molecules and harm physiological functions. Organisms have evolved complex mechanisms of antioxidant defense, and any imbalance between oxidative challenge and antioxidant protection can depress fitness components and accelerate senescence. While the role of oxidative stress in pathogenesis and aging has been studied intensively in humans and model animal species under laboratory conditions, there is a dearth of knowledge on its role in shaping life-histories of animals under natural selection regimes. Yet, given the pervasive nature and likely fitness consequences of oxidative damage, it can be expected that the need to secure efficient antioxidant protection is powerful in molding the evolutionary ecology of animals. Here, we test whether overall antioxidant defense varies with age and predicts long-term survival, using a wild population of a migratory passerine bird, the barn swallow (Hirundo rustica), as a model.

Methodology/Principal Findings

Plasma antioxidant capacity (AOC) of breeding individuals was measured using standard protocols and annual survival was monitored over five years (2006–2010) on a large sample of selection episodes. AOC did not covary with age in longitudinal analyses after discounting the effect of selection. AOC positively predicted annual survival independently of sex. Individuals were highly consistent in their relative levels of AOC, implying the existence of additive genetic variance and/or environmental (including early maternal) components consistently acting through their lives.

Conclusions

Using longitudinal data we showed that high levels of antioxidant protection positively predict long-term survival in a wild animal population. Present results are therefore novel in disclosing a role for antioxidant protection in determining survival under natural conditions, strongly demanding for more longitudinal eco-physiological studies of life-histories in relation to oxidative stress in wild populations.     

Modelling Spatial Interactions Among Fire,Spruce Budworm,and Logging in the Boreal Forest

In the boreal forest, fire, insects, and logging all affect spatial patterns in forest age and species composition. In turn, spatial legacies in age and composition can facilitate or constrain further disturbances and have important consequences for forest spatial structure and sustainability. However, the complex three-way interactions among fire, insects, and logging and their combined effects on forest spatial structure have seldom been investigated. We used a spatially explicit landscape simulation model to examine these interactions. Specifically, we investigated how the amount and the spatial scale of logging (cutblock size) in combination with succession, fire, and spruce budworm outbreaks affect area burned and area defoliated. Simulations included 30 replicates of 300 years for each of 19 different disturbance scenarios. More disturbances increased both the fragmentation and the proportion of coniferous species and imposed additional constraints on the extent of each disturbance. We also found that harvesting legacies affect fire and budworm differently due to differences in forest types consumed by each disturbance. Contrary to expectation, budworm defoliation did not affect area burned at the temporal scales studied and neither amount of logging nor cutblock size influenced defoliation extent. Logging increased fire size through conversion of more of the landscape to early seral, highly flammable forest types. Although logging increased the amount of budworm host species, spruce budworm caused mortality was reduced due to reductions in forest age. In general, we found that spatial legacies do not influence all disturbances equally and the duration of a spatial legacy is limited when multiple disturbances are present. Further information on post-disturbance succession is still needed to refine our understanding of long-term disturbance interactions.     

Megafauna in the Earth system

Understanding the complex role of large‐bodied mammals in contemporary ecosystems and the likely consequences of their continued decline is essential for effective management of the remaining wild areas on Earth. The very largest animals are in particular peril owing to a disastrous combination of continued hunting or poaching, habitat alterations, and loss of habitat. Because these threats are ongoing, conservation biologists may not be able to wait for the results of long‐term studies before proposing potential mitigation strategies. A recent conference on ‘Megafauna and ecosystem function: from the Pleistocene to the Anthropocene’ at Oxford Univ. brought together paleontologists, conservation and environmental scientists and others who share an interest in characterizing the influence of large animals on ecosystems. Integrating historical perspectives of Late Pleistocene ecosystems when large‐bodied animals were still widespread, with modern studies of areas with varying levels of intact megafauna, the aim was to develop a more holistic understanding of the consequences of the ongoing decline of large‐bodied animals around the Earth. The conference resulted in the development of two special features – one in the Proceedings of the National Academy of Science, USA and one in Ecography synthesizing the state of our knowledge about the environmental legacies of the terminal Pleistocene megafauna extinction, the complex role of modern large‐bodied animals and what the ongoing loss of their ecological interactions might mean in terms of ecosystem function. Here, we briefly review the main themes developed during the conference and outline promising future research directions.     

Persistent land-use legacies increase small-scale diversity and strengthen vegetation–soil relationships on an unmanaged heathland

Land-use legacies are recognized determinants of vegetation dynamics and plant community assembly. The duration of these legacies and how they influence the structure of vegetation communities developing naturally in nutrient-poor ecosystems is not well understood. Here, we focus on the effects of increased nutrient availability from previous agricultural practices on multiple vegetation properties in a heathland where agriculture and domestic grazing ceased near 1870 and 1895, respectively. We compared diversity, compositional and functional properties of the vegetation responses to land-use legacies in the soil between areas with different agricultural histories (previously cultivated vs. uncultivated). Diversity measures were found to be higher in the previously cultivated soils. β-diversity was mainly driven by changes in species relative cover and increased with increasing nutrient availability in the cultivated area. Furthermore, functional traits related to nutrient acquisition (SLA and Leaf Nitrogen content) and the changes in vegetation composition were directly linked to soil properties only in the previously cultivated part of the heathland. Together these results revealed a shift to a deterministic control of the plant community, where increased nutrient availability leads to stronger associations between soil and vegetation properties. This suggests that as nutrients become available, niche differentiation and competitive interactions become the predominant underlying mechanisms structuring the community. Our study shows that land-use legacies of moderate intensity can alter the assembly mechanisms and diversity patterns in unmanaged vegetation that can be maintained after more than a century since cessation of agricultural practice. Identifying land-use legacies and understanding how they structure heathland communities can thus lead to management decisions adapted to the specific assembly mechanisms and result in a more effective management.     

The Effects of Spatial Legacies following Shifting Management Practices and Fire on Boreal Forest Age Structure

Forest age structure and its spatial arrangement are important elements of sustainable forestry because of their effects on biodiversity and timber availability. Forest management objectives that include specific forest age structure may not be easily attained due to constraints imposed by the legacies of historical management and natural disturbance. We used a spatially explicit stochastic model to explore the synergetic effects of forest management and fire on boreal forest age structure. Specifically, we examined (1) the duration of spatial legacies of different management practices in the boreal forest, (2) how multiple shifts in management practices affect legacy duration and the spatial trajectories of forest age structure, and (3) how fire influences legacy duration and pattern development in combination with harvesting. Results based on 30 replicates of 500 years for each scenario indicate that (1) spatial legacies persist over 200 years and the rate at which legacies are overcome depends on whether new management targets are in synchrony with existing spatial pattern; (2) age specific goals were met faster after multiple management shifts due to the similar spatial scale of the preceding management types; (3) because large fires can erase the spatial pattern created by smaller disturbances, scenarios with fire had shorter lags than scenarios without fire. These results suggest that forest management goals can be accelerated by applying management at a similar spatial scale as existing spatial patterns. Also, management planning should include careful consideration of historical management as well as current and likely future disturbances.     

Invasive legume management strategies differentially impact mutualist abundance and benefit to native and invasive hosts

Determining the best management practices for plant invasions is a critical, but often elusive goal. Invasive removals frequently involve complex and poorly understood biotic interactions. For example, invasive species can leave potent legacies that influence the success of native species restoration efforts, and positive plant‐microbial feedbacks may promote continued reinvasion by an exotic species following restoration. Removal methods can vary in their effects on plant–soil feedbacks, with consequences for restoration of native species. We determined the effects of invasion by a leguminous shrub (French broom; Genista monspessulana) on the density and community composition of, and benefit conferred by, its microbial mutualists in its invading range. Densities of soil‐dwelling rhizobia were much higher in areas invaded by G. monspessulana relative to uninvaded areas, and this increased density of rhizobia fed back to increase seedling growth of both the invader and native legumes. We further compared how three techniques for removing G. monspessulana affected the densities of rhizobia relative to areas where G. monspessulana was still present. Removal by hand‐pulling reduced soil rhizobial densities, and reduced growth of one native legume, while having no effect on the growth of the invader. Overall, our results show that the consequences of restoration techniques, both above‐ and belowground, could be critical for the successful removal of an invasive legume and restoration of native species.     

Within‐Year Soil Legacies Contribute to Strong Priority Effects of Exotics on Native California Grassland Communities

Understanding priority effects, in which one species in a habitat decreases the success of later species, may be essential for restoring native communities. Priority effects can operate in two ways: size‐asymmetric competition and creation of “soil legacies,” effects on soil that may last long after the competitive effect. We examined how these two types of priority effects, competition and soil legacies, drive interactions between seedlings of native and exotic California grassland plants. We established native and exotic communities in a mesocosm experiment. After 5 weeks, we removed the plants from half the treatments (soil legacy treatment) and retained the plants in the other half (priority effect treatment, which we interpret to include both competition and soil legacies). We then added native or exotic seed as the colonizing community. After 2 months, we measured the biomass of the colonizing community. When germinating first, both natives and exotics established priority effects, reducing colonist biomass by 86 and 92%, respectively. These priority effects were predominantly due to size‐asymmetric competition. Only exotics created soil legacies, and these legacies only affected native colonizers, reducing biomass by 74%. These results imply that exotic species priority effects can affect native grassland restorations. Although most restorations focus on removing exotic seedlings, amending soil to address soil legacies may also be critical. Additionally, because native species can exclude exotics if given a head start, ensuring that natives germinate first may be a cost‐effective restoration technique.     

The effects of reproductive specialization on energy costs and fitness genetic variances in cyclical and obligate parthenogenetic aphids

Organisms with coexisting sexual and asexual populations are ideal models for studying the consequences of either reproductive mode on the quantitative genetic architecture of life-history traits. In the aphid Rhopalosiphum padi, lineages differing in their sex investment coexist but all share a common parthenogenetic phase. Here, we studied multiple genotypes of R. padi specialized either for sexual and asexual reproduction and compared their genetic variation in fitness during the parthenogenetic phase. Specifically, we estimated maintenance costs as standard metabolic rate (SMR), together with fitness (measured as the intrinsic rate of increase and the net reproductive rate). We found that genetic variation (in terms of broad-sense heritability) in fitness was higher in asexual genotypes compared with sexual genotypes. Also, we found that asexual genotypes exhibited several positive genetic correlations indicating that body mass, whole-animal SMR, and apterous individuals production are contributing to fitness. Hence, it appears that in asexual genotypes, energy is fully allocated to maximize the production of parthenogenetic individuals, the simplest possible form of aphid repertoire of life-histories strategies.     

Using field survey and remote sensing to assess rainforest canopy damage following Cyclone Larry

Abstract We surveyed canopy damage in upland and lowland rainforests following Cyclone Larry, which severely impacted the Innisfail and Atherton Tableland regions in March 2006. An existing damage‐classification was used as a basis for field assessment of rainforest canopy damage. Our field measurements showed that the damage categories were not clearly separated. Upland and lowland sites significantly differed in tree fall variables and measures of forest structure. There was a difference in recruitment of disturbance indicator species owing to varying levels of coarse woody debris at sites. Aspect was not found to be a significant variable in predicting damage owing to complexity of topography and the cyclone wind field. Analysis of remotely sensed imagery indicated that only high damage levels could be reliably discerned. Areas of very rapid vegetation growth in severely damaged sites are most easily detected with vegetation indices based on both near infrared and short wave infrared data. Numbers of fallen trees and their trunk orientations can be reliably quantified using high resolution (sub‐metre) colour aerial photography. This permits some estimation of whether the wind field was unidirectional or locally vortical.     

Soil legacy effects of plants and drought on aboveground insects in native and range-expanding plant communities

Soils contain biotic and abiotic legacies of previous conditions that may influence plant community biomass and associated aboveground biodiversity. However, little is known about the relative strengths and interactions of the various belowground legacies on aboveground plant–insect interactions. We used an outdoor mesocosm experiment to investigate the belowground legacy effects of range-expanding versus native plants, extreme drought and their interactions on plants, aphids and pollinators. We show that plant biomass was influenced more strongly by the previous plant community than by the previous summer drought. Plant communities consisted of four congeneric pairs of natives and range expanders, and their responses were not unanimous. Legacy effects affected the abundance of aphids more strongly than pollinators. We conclude that legacies can be contained as soil ‘memories’ that influence aboveground plant community interactions in the next growing season. These soil-borne ‘memories’ can be altered by climate warming-induced plant range shifts and extreme drought.     

The emergence and intensification of early hunter‐gatherer niche construction

Hunter‐gatherers, especially Pleistocene examples, are not well‐represented in archeological studies of niche construction. However, as the role of humans in shaping environments over long time scales becomes increasingly apparent, it is critical to develop archeological proxies and testable hypotheses about early hunter‐gatherer impacts. Modern foragers engage in niche constructive behaviors aimed at maintaining or increasing the productivity of their environments, and these may have had significant ecological consequences over later human evolution. In some cases, they may also represent behaviors unique to modern Homo sapiens. Archeological and paleoenvironmental data show that African hunter‐gatherers were niche constructors in diverse environments, which have legacies in how ecosystems function today. These can be conceptualized as behaviorally mediated trophic cascades, and tested using archeological and paleoenvironmental proxies. Thus, large‐scale niche construction behavior is possible to identify at deeper time scales, and may be key to understanding the emergence of modern humans.     

Codes mythiques du Mézinien

Colonized by mammoths, the Eurasian steppe witnessed the birth of religious performances that are based on the reciprocation of life with the human populations moving apace. Plastic art codes attest to this balanced equilibrium with an up-to-present untamed environment, which is still in evidence among some Siberian peoples and the Saami (Lapps) in Europe. Such persistence can be seen as direct legacies and displays an environment that allows a range of attitudes towards animals incompatible with the notion of animal “domestication” as we commonly associate to the European Neolithic.     

Drought legacies are dependent on water table depth,wood anatomy and drought timing across the eastern US

Severe droughts can impart long‐lasting legacies on forest ecosystems through lagged effects that hinder tree recovery and suppress whole‐forest carbon uptake. However, the local climatic and edaphic factors that interact to affect drought legacies in temperate forests remain unknown. Here, we pair a dataset of 143 tree ring chronologies across the mesic forests of the eastern US with historical climate and local soil properties. We found legacy effects to be widespread, the magnitude of which increased markedly in diffuse porous species, sites with deep water tables, and in response to late‐season droughts (August–September). Using an ensemble of downscaled climate projections, we additionally show that our sites are projected to drastically increase in water deficit and drought frequency by the end of the century, potentially increasing the size of legacy effects by up to 65% and acting as a significant process shaping forest composition, carbon uptake and mortality.     

Global environmental change effects on ecosystems: the importance of land‐use legacies

One of the major challenges in ecology is to predict how multiple global environmental changes will affect future ecosystem patterns (e.g. plant community composition) and processes (e.g. nutrient cycling). Here, we highlight arguments for the necessary inclusion of land‐use legacies in this endeavour. Alterations in resources and conditions engendered by previous land use, together with influences on plant community processes such as dispersal, selection, drift and speciation, have steered communities and ecosystem functions onto trajectories of change. These trajectories may be modulated by contemporary environmental changes such as climate warming and nitrogen deposition. We performed a literature review which suggests that these potential interactions have rarely been investigated. This crucial oversight is potentially due to an assumption that knowledge of the contemporary state allows accurate projection into the future. Lessons from other complex dynamic systems, and the recent recognition of the importance of previous conditions in explaining contemporary and future ecosystem properties, demand the testing of this assumption. Vegetation resurvey databases across gradients of land use and environmental change, complemented by rigorous experiments, offer a means to test for interactions between land‐use legacies and multiple environmental changes. Implementing these tests in the context of a trait‐based framework will allow biologists to synthesize compositional and functional ecosystem responses. This will further our understanding of the importance of land‐use legacies in determining future ecosystem properties, and soundly inform conservation and restoration management actions.     

Variability of important vital rates challenges the demographic buffering hypothesis

Selection is assumed to eliminate life-histories showing high variability in vital rates that have the greatest influence on population performance. Therefore, an inverse variability-importance relationship of vital rates is believed to be a universal pattern for diverse life-histories. We tested for such a relationship using multi-year demographic data on a large number of populations of two perennial plant species. Applying different approaches, we first examined the overall variability-importance relationship for the average main vital rates (survival, growth, retrogression, fecundity) per species, and then separately for each population. We found an overall inverse relationship between temporal variation and importance of the average main vital rates for both study species, but these negative species-level correlations were mainly caused by different scales of the examined vital rates. When variability-importance relationships were examined across individual demographic transitions within populations, the abundance of positive and negative correlations depended largely on the method used, and positive correlations were more common after correcting vital rates for sampling variation than when using uncorrected vital rates. Our results cast doubt on the generality of the demographic buffering hypothesis, suggesting that the inverse variability-importance relationship may not be a universal pattern when vital rates are examined for multiple populations of the same plant species.