Phylogeny of Acomys spinosissimus (Rodentia, Muridae) from north Malawi and Tanzania: evidence from morphological and molecular analysis

New specimens of Acomys spinosissimus from northern Malawi and southern Tanzania were subjected to morphological, molecular (cytochrome b mitochondrial gene) and cytogenetical analysis in order to establish the phylogenetic position of these populations among A. spinosissimus, as well as their relationships with other species (A. subspinosus and A. wilsoni). The monophyly of the spinosissimus clade is supported by morphological and molecular phylogenies. Cytogenetics and morphology, but not the cytochrome b phylogeny show the possible existence of two sibling species within spinosissimus. Incongruences are noted between molecular and morphological trees, especially concerning the position of the Transvaal specimens. Two different biogeographic scenarios for the origin and dispersal of A. spinosissimus are discussed in the light of available palaeontological data.     

The comparative gastrointestinal morphology of Jaculus jaculus (Rodentia) and Paraechinus aethiopicus (Erinaceomorpha)

Jaculus jaculus (Lesser Egyptian jerboa) and Paraechinus aethiopicus (Desert hedgehog) are small mammals which thrive in desert conditions and are found, among others, in the Arabian Peninsula. Jaculus jaculus is omnivorous while P. aethiopicus is described as being insectivorous. The study aims to describe the gastrointestinal tract (GIT) morphology of these animals which differ in diet and phylogeny. The GITs of J. jaculus (n = 8) and P. aethiopicus (n = 7) were weighed, photographed, and the length, basal surface areas, and luminal surface areas of each of the anatomically distinct gastrointestinal segments were determined. The internal aspects of each area were examined and photographed while representative histological sections of each area were processed to wax and stained using haematoxylin and eosin. Both species had a simple unilocular stomach which was confirmed as wholly glandular on histology sections. Paraechinus aethiopicus had a relatively simple GIT which lacked a caecum. The caecum of J. jaculus was elongated, terminating in a narrow cecal appendix which contained lymphoid tissue on histological examination. The internal aspect of the proximal colon of J. jaculus revealed distinct V‐shaped folds. Stomach content analysis of J. jaculus revealed mostly plant and seed material and some insects, whereas P. aethiopicus samples showed plant material in addition to insects, indicating omnivorous feeding tendencies in areas where insects may be scarce. J. Morphol. 277:671–679, 2016. © 2016 Wiley Periodicals, Inc.     

Comparative gastrointestinal morphology of the Kori bustard and secretary bird

Two secretary birds and three Kori bustards were studied to determine differences between their body size and gastrointestinal morphology. Body measurements were made on captive, live birds and gastrointestinal measurements on fresh postmortem specimens. For predator species, such as the Kori bustard and secretary bird, body size is a function of their ability to capture and destroy prey. While the secretary bird was clearly the taller of the two species, superior body weight, wing length, and therefore body size was noted for the Kori bustard. The size and length of the gastrointestinal tract varied between species. The secretary bird had the shorter, less complex digestive tract, with a foregut well adapted for consumption of large quantities of flesh. The large intestine was devoid of ceca. The gastrointestinal tract of the Kori bustard was markedly different from that of the secretary bird. The foregut was less complex and the large intestine possessed large, voluminous ceca.     

Species delimitation in the Acomys cahirinus–dimidiatus complex (Rodentia, Muridae) inferred from chromosomal and morphological analyses

Our earlier chromosome banding studies of Acomys cahirinus and Acomys dimidiatus (the latter long considered to be a subspecies of the former) revealed that, despite very close diploid numbers (36 vs. 38), these taxa possess sharply different karyotypes and undoubtedly belong to different species. In this context, the taxonomic status and the relationship between the two chromosomal forms in Sinai (2 n  = 36) and Israel (2 n  = 38), chromosomally homozygous across a vast range except for a very narrow hybrid zone, remain poorly documented. Neither of these forms have previously been studied by chromosome banding; thus, the exact nature of chromosomal differences as well as the species to which these forms should be assigned remain unknown. Here, we present the data on comparative G-banding analysis and morphometrics of Acomys from Israel, Sinai, and Saudi Arabia, and a hybrid obtained in laboratory crosses between latter two. The analysis revealed that karyotype of Acomys from Israel is identical to that of Acomys from Saudi Arabia and both are different from that of Acomys from Sinai by one Robertsonian fusion. Therefore, karyotypically, all three are very different from A. cahirinus . It follows from the study that Sinai and probably Arabian peninsula and Minor Asia must be excluded from geographical distribution of A. cahirinus , which is limited from West Sahara to Egypt along Nile river (except Sinai). Furthermore, the synthesis of chromosomal and recent molecular data suggests a phylogeographical scenario explaining the modern distribution of Acomys in the Sinai and Arabian peninsulas and permits the update of the taxonomic status of these populations.  © 2007 The Linnean Society of London, Biological Journal of the Linnean Society , 2007, 91 , 203–214.     

Phylogeography of spiny mice (genus Acomys, Rodentia: Muridae) from the south-western margin of the Sahara with taxonomic implications

The present study aims to depict the overall pattern of Acomys history in south-western Sahara. We tested the specific predictions that: (1) several mitochondrial clades can be identified and that they coincide with the described species; (2) successive phases of desert expansion and contraction during the last 3 Myr have resulted in several phases of demographic expansion and population fragmentation in Acomys ; and (3) isolation-by-distance occurs. The extent of phylogeographic patterns and molecular genetic diversity (cytochrome b gene and D-loop) were addressed in a survey of 90 individuals of Acomys from 38 localities. Our phylogeographical analyses show a strong genetic structure within western Saharan Acomys , with several phylogroups displaying non-overlapping geographic distributions. Restricted gene flow with isolation-by-distance was recorded and a signal of population expansion was detected within several clades. We suggest that during arid or semi-arid paleoclimatic periods, when large sandy areas were present, Acomys was restricted to rocky massifs, whereas, in more humid periods, when savannah and/or steppe habitat prevailed, this species was able to disperse and to survive outside rocky areas because food resources were abundant. Based on a comprehensive sampling and the use of an integrative approach (i.e. combining cytogenetic, molecular and morphological data), we firmly propose that Acomys airensis should be considered as a junior synonym of Acomys chudeaui .  © 2009 The Linnean Society of London, Biological Journal of the Linnean Society , 2009, 98 , 29–46.     

中国浙江麝鼩属(劳亚食虫目:鼩鼱科)一新种描记

2017年8月,在浙江省拟建淳安磨心尖省级自然保护区和拟建东阳市东江源省级自然保护区捕获麝鼩属（Crocidura）共5号标本。基于线粒体细胞色素b基因构建的系统发育树显示采集于浙江的麝鼩属样本与大麝鼩（Crocidura lasiura）和日本麝鼩（Crocidura dsinezumi）构成姊妹群,遗传距离最近,而与中国西南部分布的小体型印支小麝鼩（Crocidura indochinensis）、五指山小麝鼩（Crocidura wuchihensis）及东北部分布的山东小麝鼩（Crocidua shantungensis）、北小麝鼩（Crocidua suaveolens）亲缘关系较远,其遗传距离分别为0.114、0.124、0.139和0.144。这些样本与麝鼩属其他物种之间的遗传距离在0.101~0.155之间,最小遗传距离出现在来自浙江的样本和大麝鼩之间,最大遗传距离在浙江样本与中麝鼩之间。形态上,采集于浙江的麝鼩属标本个体小,体长48~61mm（平均：55.60mm）,尾长35~49mm（平均：43.14mm）;尾长与体长之比72.92%~80.36%;尾近乎裸露,尾基1/3~1/2着生稀疏长毛;尾上下双色,背部黑褐色,腹部较淡;颅较短,颅全长15.60~17.16mm（平均：16.46mm）,与中国东北部分布的山东小麝鼩和北小麝鼩相近又有区别,与已知其它麝鼩属物种形态差异较大;综合形态和系统发育关系证实采集于浙江的麝鼩属物种为一新物种,命名为东阳江麝鼩（Crocidura dongyangjiangensis Liu Y, Chen SD, and Liu SY sp. nov.）。本文对其形态、栖息环境和与近缘种的区别进行了详细记述。     

Comparative morphology of three South African Triviidae (Gastropoda: Prosobranchia) with the description of a new species

Three species of Trivia were collected from subtidal habitats in the Cape of Good Hope Peninsula, South Africa. The morphology of T. ovulata (Lamarck, 1811), T. millardi (Cate, 1979) and T. verhoefi sp. nov. is described. Each species can be distinguished by a unique pattern of mande coloration, conchological characters of the fossula and shape of the radular teeth. The central nervous system was examined and found to be of the same configuration in die diree South African spe Trivia ovulata and T. verhoefi appear to be gonochoric while T. millardi is a protandric hermaphrodite. Trivia ovulata and T. millardi also differ in the position of the receptaculum seminis. Differences in internal morphology reported in previous work and the present study are discussed. The fact that the central nervous system of Trivia is euthyneurous is reconfirmed. Trivia ovulata and T. millardi were associated with colonial tunicates as previously recorded for other members of the genus.     

A reassessment of the cranial morphology of Neoepiblema acreensis (Rodentia: Chinchilloidea), a Miocene rodent from South America

The rodent Neoepiblema acreensis (Chinchilloidea: Neoepiblemidae) is member of a lineage that reached gigantic dimensions during the Late Miocene of South America—the Neoepiblemidae. In this paper, the cranial anatomy of this rodent is reviewed. Noninvasive imaging is used to reveal internal structures. Our review is based mainly on an almost complete cranium from the Upper Miocene deposits of the western Amazonia of Brazil. The cranium has an elongated rostrum, large frontal sinuses, a deep temporal fossa, well-developed sagittal, nuchal, medial occipital, and secondary crests, and a tympanic fenestra connected to the external acoustic meatus by a thin ventral cleft. Remarkably, the cranium shows the presence of fossae on the posterior region of the frontal and parietal bones, and a “W-shaped” fronto-parietal suture, which are not present in other analyzed chinchilloids. This study contributes to the knowledge of the morphology of this extinct rodent as well as to the phylogenetic relationships and paleobiology of neoepiblemids.     

Comparative morphology of the first instar of three species of Metopia Meigen (Diptera: Sarcophagidae, Miltogramminae)

The first instar larva is described for three species of the kleptoparasitic miltogrammine genus Metopia Meigen: M. campestris (Fallén), M. argentata Macquart and M. argyrocephala (Meigen). Using a combination of light microscopy and scanning electron microscopy, the morphology of the cephaloskeleton as well as the general external morphology are extensively documented, and the phylogenetic implications are discussed. Like other species of Miltogramminae, the first instar of species of Metopia possesses a strong labrum and well‐developed mouth‐hooks. Some other features found in Metopia spp. are rare in the Miltogramminae, such as a serrated ventral surface of the tip of the mouth‐hook and the lack of a posterior spiracular cavity. A few larval features apparently unique for species of Metopia have so far been documented: base of mouth‐hook with a lateral arm‐like extension and abdominal segments with transverse furrow ventrally. The body is equipped with longitudinal cuticular ridges on all segments, which may be a subfamily ground‐plan autapomorphy. Marked morphological and behavioural differences are documented between the first instar of M. argentata and that of M. argyrocephala, the adult females of which are otherwise difficult to separate.     

Functional skeletal morphology and its implications for locomotory behavior among three genera of myosoricine shrews (Mammalia: Eulipotyphla: Soricidae)

Myosoricinae is a small clade of shrews (Mammalia, Eulipotyphla, Soricidae) that is currently restricted to the African continent. Individual species have limited distributions that are often associated with higher elevations. Although the majority of species in the subfamily are considered ambulatory in their locomotory behavior, species of the myosoricine genus Surdisorex are known to be semifossorial. To better characterize variation in locomotory behaviors among myosoricines, we calculated 32 morphological indices from skeletal measurements from nine species representing all three genera that comprise the subfamily (i.e., Congosorex, Myosorex, Surdisorex) and compared them to indices calculated for two species with well‐documented locomotory behaviors: the ambulatory talpid Uropsilus soricipes and the semifossorial talpid Neurotrichus gibbsii. We summarized the 22 most complete morphological variables by 1) calculating a mean percentile rank for each species and 2) using the first principal component from principal component analysis of the indices. The two methods yielded similar results and indicate grades of adaptations reflecting a range of potential locomotory behaviors from ambulatory to semifossorial that exceeds the range represented by the two talpids. Morphological variation reflecting grades of increased semifossoriality among myosoricine shrews is similar in many respects to that seen for soricines, but some features are unique to the Myosoricinae. J. Morphol. 276:550–563, 2015. © 2015 Wiley Periodicals, Inc.     

Molecular taxonomy of Crocidura species (Eulipotyphla: Soricidae) in a key biogeographical region for African shrews,Nigeria

The taxonomy of African shrew species is still unresolved due to their conserved morphology. This also affects knowledge concerning their geographic distribution. In Nigeria, using mitochondrial Cytochrome b gene sequences, we carried out a survey for shrews from the genus Crocidura across various ecological zones to determine taxa that are present and also to assess their phylogeographic structure. Our analyses include 183 specimens collected with Sherman traps from 19 localities around the country. We detected six taxa: Crocidura olivieri lineages II, III and IV, C. hildegardeae, C. jouvenetae, and C. foxi. Among these, C. hildegardeae and C. jouvenetae are reported in Nigeria for the first time. Phylogenetic comparison of our genetic sequences to those generated from other parts of Africa demonstrate that all species in our study, as currently defined, are in need of taxonomic revision. Geographically, Nigeria seems to represent the easternmost boundary for C. olivieri lineage II and C. jouvenetae, and the western distribution limit of C. olivieri lineage IV and C. hildegardeae. The Niger River appears to be the most significant topographical barrier restricting these taxa. This information is vital to preserving the diversity but also managing the epidemiological potential of these small mammals.     

Morphological convergence and coexistence in three sympatric North American species of Microtus (Rodentia: Arvicolinae)

Aim  Niche theory predicts that ecologically identical species cannot stably coexist in local communities. My aim was to investigate morphological diversity as a possible factor enabling the coexistence of a species-rich Microtus (Rodentia: Arvicolinae) fauna in a hotspot of North American mammalian diversity, the Greater Yellowstone Ecosystem (GYE).
Location  The Greater Yellowstone Ecosystem, North America.
Methods  Using in-hand morphological measurements of size and shape, I compared the morphologies of three North American vole species ( Microtus spp.), in sympatry in the GYE and in allopatry across their ranges, in order to examine: (1) whether morphologies are fixed or plastic and (2) the degree of morphological character displacement or convergence in sympatric species.
Results  Support was found for plasticity of morphology for all three vole species: M. longicaudus , M. montanus and M. pennsylvanicus. However, Microtus individuals of all species from the GYE area of sympatry were more similar to each other than to allopatric individuals of the same species.
Main conclusions  Competition among these congeners is not manifested in morphological overdispersion. The response of these congeneric species to the same local ecological conditions is convergent. The relative strength of environmental conditions appears to be stronger than the strength of competitive interactions among the study species.     

The blood vasculature of the gastrointestinal tract in chinook, Oncorhynchus tshawytscha (Walbaum), and coho, O. kisutch (Walbaum), salmon

The venous and arterial vasculature of the chinook and coho salmon gastrointestinal tract were examined using corrosion casts and India ink injection techniques. Observations derived from 28 individuals of various sizes and of both sexes were used to construct simplified venous and arterial plans. Examination of the blood vasculature revealed the presence of a variety of anastomoses hitherto undescribed in teleosts.     

Comparative morphology of female flowers and systematics in Geonomeae (Arecaceae)

Female floral structure is compared in Geonomeae (Arecaceae). A perianth is formed by two alternate whorls of three basally congenitally united and imbricate sepals and three basally congenitally united and apically valvate petals. A sterile androecium is formed by a variable number of staminodes, which are united into a tube. The gynoecium shows three more or less equally developed carpels or is pseudomonomerous (Geonoma). The single anatropous ovule per carpel is median, either basal or at mid-height of the ovary. A septal nectary is present at the base and mid-height of the ovaries and exits at different levels of the ovary. Carpels in pseudomonomerous gynoecia seem to be basistylous, but the styles are more lateral or apical in gynoecia with all three carpels equally developed. Stigmas expose unicellular or multicellular (Welfia) papillae at anthesis. Pollen tube transmitting tracts and a compitum are present in the ventral slits of the postgenitally united styles. Floral structure in Geonomeae is compared with other Arecaceae, especially Arecoideae, in a morphological and systematic context.     

Comparative study on the forefoot and hindfoot intrinsic muscles of some cavioidea rodents (Mammalia, Rodentia)

The present study compares the forefoot and hindfoot musculature of five representative species of Cavioidea rodents. In all species, the musculature of both forefeet and hindfeet have the same array regardless of the absence of digit I in the manus of Hydrochaeris hydrochaeris and Cavia porcellus. Our results suggest a tendency in these species towards a three-digit system, with a functional loss of digit V and a predominance of digit III in their forefeet. In the same way, the muscular reduction of digit I in the other rodents analyzed indicates a four-digit system with predominance of digit II in Myoprocta acouchy and Dasyprocta leporina and of digit V in Agouti paca. There seems to be an association between the muscular arrangement and functional axis of the foot, raising the general question why this axis runs between the third and forth digit, or along the third digit.     

Intraspecific variability of beaver teeth (Castoridae: Rodentia)

The metric variability of the teeth of Castor fiber Linné, 1758 and Castor canadensis Kuhl, 1820 with age are assessed. The ages of the studied specimens of C. fiber range from about 2 months to 16–17 years. Measurements of all teeth are given, and show a large range of size variation over all ages. The greatest size ranges can be observed for incisors, premolars, and third molars. Size variations of the fossil beavers Steneofiber eseri v. Meyer, 1846, Steneofiber castorinus Pomel, 1847, Anchitheriomys suevicus Schlosser, 1884, and Trogontherium cuvieri Fischer de Waldheim, 1809 are compared with those of C. fiber, and are of the same range and magnitude. It seems that it is nearly impossible to age beavers exactly with non‐invasive methods on the basis of tooth morphology, namely by the form and pattern of enamel islands on the chewing surface of the cheek teeth. Therefore, in conclusion, it is suggested that the observed variability in the size of fossil beaver teeth should be interpreted as changes with age in accordance with the overall size range in C. fiber. © 2009 The Linnean Society of London, Zoological Journal of the Linnean Society, 2009, 155 , 926–936.     

Relationships among extant and fossil echimyids (Rodentia: Hystricognathi)

The echimyid rodents are the most diverse group of Neotropical hystricognaths, with approximately 40 extant and fossil genera. Craniodental characters are proposed in order to formulate hypotheses of phylogenetic relationships within the Echimyidae. A data matrix of 54 taxa and 50 characters is constructed and submitted to parsimony analyses using PAUP and WinClada programs. Analysis of the complete data set results in 47 448 most parsimonious trees 107 steps long. These trees are summarized in a strict consensus tree, which is taken as the main phylogenetic hypothesis resulting from this study. The monophyly of several currently recognized supraspecific taxa is not corroborated. These are: the subfamilies Eumysopinae, Echimyinae, Myocastorinae and Adelphomyinae; and the genera Proechimys , Echimys and Makalata . Conversely, the monophyly of Dactylomyinae and Trinomys is supported. New associations are proposed: (1) a clade comprising the extant Carterodon , Clyomys and Euryzygomatomys and the fossil Pampamys and Theridomysops placed at the base of the crown-group Echimyidae; (2) a clade uniting Proechimys , Hoplomys and Trinomys , which is the sister-taxon of (3) a clade including Mesomys , Lonchothrix , Myocastor and a clade with extant dactylomyines and echimyines and associated fossil taxa. Based on this phylogenetic hypothesis, patterns of tooth evolution in Echimyidae are discussed, and minimum ages for the divergence events within the family are estimated.  © 2004 The Linnean Society of London, Zoological Journal of the Linnean Society , 2004, 142 , 445–477.