New species in the rheophilous genus Nicsmirnovius Chiambeng & Dumont, 1999 (Branchiopoda: Anomopoda: Chydoridae) and reassignment of Alona eximia Kiser, 1948 and Alonella fitzpatricki Chien, 1970

A morphological comparison of specimens previously assigned to Alona eximia Kiser, 1948 from tropical Africa, Eastern Asia and the Americas shows that this species-group shares a number of morphological characters on the postabdomen, head pores, first antenna and second and fourth limb that separate them from Alona Baird, 1843 but unite them with Nicsmirnovius Chiambeng & Dumont, 1999. Alonella fitzpatricki Chien, 1970, formerly believed to be a junior synonym of A. eximia, is separated from the latter and assigned to the genus Nicsmirnovius. Two new taxa, from Africa and the Island of Socotra (Yemen) are added to the genus. The relationship between the specialised habitat of these chydorids and their morphology is discussed. The geographic range of all known populations is figured and a key to species is presented.     

Guinean biodiversity at the edge: Rodents in forest patches of southern Mali

Southern Mali mainly belongs to the Sudanian savanna bioclimatic zone, but forest patches showing botanical affinities with Guinean humid forest remain as gallery forests or ravine forests. To characterize the rodent diversity of this area and check for the presence of some species of Guinean affinities in this group, rodent assemblages were sampled in four regions of southern Mali, using trapping and observational data in forest and surrounding habitats. Twenty-four species were recorded, comprising a representative sample of the expected overall diversity in this group according to rarefaction curves. Praomys rostratus was the dominant species in the most humid, closed lowland forest. Praomys daltoni was also present in this habitat type, being all the more abundant as habitat degradation was apparent. It became the dominant species in ravine forest on rocky substrate where P. rostratus was completely absent. In Sudanian savanna habitats and in herbaceous and cultivated areas, Mastomys erythroleucus dominated a diverse rodent community. A few species were found that testified for Guinean affinities of the most humid forest patches, especially in the extreme southeast of the country (region of Sikasso). Rodent assemblages of the Bafing and Mts Mandingues areas, in the western part of the study area, showed the highest similarity, in relation with environmental characteristics of this region representing an extension of the Fouta Djallon plateau in Guinea. The results obtained highlight the high biodiversity value of this forest-savanna mosaic, and provide new arguments in favour of the preservation of West African forest patches and their surrounding habitats.     

Recognition of a new generic‐level swallow taxon from central Africa

The forest swallow Petrochelidon fuliginosa is a little‐known species endemic to lowland forests in central Africa; for lack of access to high‐quality genetic material, the species has been omitted from all previous molecular phylogenetic studies of the swallows. The species is currently placed in the genus Petrochelidon, within the ‘mud‐nester’ clade of swallows, yet its plumage, morphology, and nesting behavior do not align well with those of other major swallow lineages. As a consequence, upon securing recent specimens and high‐quality tissue samples, we sequenced DNA from two mitochondrial genes and one nuclear marker to place this species in the swallow phylogenetic tree. Our results placed the forest swallow firmly within the ‘mud nester’ clade, but outside of the clade corresponding to Petrochelidon. This outcome led us to document and describe formally a distinct, generic‐level lineage of swallow endemic to the Lower Guinean forest region of central Africa.     

A reassessment of the distribution of the rare Genetta johnstoni (Viverridae, Carnivora) with some newly discovered specimens

The rare Johnston’s Genet (Genetta johnstoni) is one of the least known small carnivores inhabiting the West African rain forest. Some newly discovered specimens collected from the field (Guinea and Ivory Coast) and several rediscovered specimens resulting from reinvestigating collections, have permitted us to reconsider the distribution of the species. Coupled with a bibliographic review and a census of specimens kept in public collections, a reassessed distribution map is proposed, extending the previous estimated range 400 km to the West (Kolenté Plates, Guinea) and more than 600 km to the East (Tarkwa, Ghana). The majority of collected specimens have come from the inland forests of northern Liberia and south‐eastern Guinea, while the surroundings of Mt. Nimba also support numbers of this species. We suggest that the supposed restriction of G. johnstoni to rain forest be re‐evaluated because a specimen was collected in a region of moist woodlands and savannah (Kolenté Plateau). With regard to these new distributional data, conservation implications for the whole Upper Guinean block population are discussed.     

The Influence of Habitat,Season, and Detectability on Abundance Estimates across an Amazonian Parrot Assemblage

The Amazon basin holds very high parrot species richness but almost nothing is known of parrot population densities in the region or how these vary between species, habitats, sites, and seasons. Such data are becoming important as humans impact on increasing areas of the region. Seventeen parrot species were surveyed using a line transect distance sampling method over 3 yr in floodplain and terra firme forests at two sites in the Tambopata region of southeast Peru. Density estimates for most species were in the range of 3.3–7.8/km², with Brotogeris cyanoptera and Amazona farinosa reaching densities of 22 and 23/km² in floodplain forest during the dry season. Parrot densities were higher in floodplain forest than in terra firme forest at both sites. The parrot communities of terra firme forests were similar across sites and seasons, but those in floodplain forests differed widely across sites and across seasons. Upper canopy birds are notoriously difficult to survey. We introduce a procedure to correct for the likely violation of the assumption that all birds on the transect line are detected (distance sampling assumption g(0) = 1). We correct g(0) based on calling rates of birds using a cue‐counting technique. Multipliers for g(0) differ across species and site, but not season. This method yielded density estimates on average 22 percent higher (6–40% higher in individual species) than those from the standard method.     

Does a ruderal strategy dominate the endemic flora of the West African forests?

Aim  To understand the distribution pattern of endemic plant species in West African rain forests, one of the global priority areas for biodiversity conservation.
Location  Upper Guinean forests, West Africa (Senegal, Guinea-Bissau, Guinea, Sierra Leone, Liberia, Côte d'Ivoire, Ghana and Togo).
Methods  We used herbarium collections from the whole Upper Guinean region ( sensu White 1981) to analyse the distribution patterns of 216 vascular plant species (approximately one-third of the endemic flora ranging from herbs to trees) that are restricted to these rain forests. We related species distribution ranges and species commonness to the main environmental variables and species life-history traits.
Results  We found that most endemic species of West African forests have large distribution ranges and ruderal strategies. Among all plant life-forms, species with small ranges were restricted to very moist places whereas more widespread species were less dependent on the availability of water. These more common species seem able to tolerate drier conditions, indicated by the minimum rainfall conditions where they are found and the positive correlation with local habitat openness. Light-demanding endemics were more common and widespread than shade-tolerant species, and there was a trend towards wind-dispersed species having a higher proportion of records in open places. This suggests that how widespread and common an endemic species is depends on being able to tolerate open and drier conditions.
Main conclusions  A ruderal strategy seems to be key for understanding the success of endemics in the Upper Guinean forests, and indicates the important role of disturbances in shaping the composition of these tropical forests. Our results have large implications for predicting the potential effect of increasing drought on rare endemic plant species of West African forests.     

Rigorous approaches to species delimitation have significant implications for African crocodilian systematics and conservation

Accurate species delimitation is a central assumption of biology that, in groups such as the Crocodylia, is often hindered by highly conserved morphology and frequent introgression. In Africa, crocodilian systematics has been hampered by complex regional biogeography and confounded taxonomic history. We used rigorous molecular and morphological species delimitation methods to test the hypothesis that the slender-snouted crocodile (Mecistops cataphractus) is composed of multiple species corresponding to the Congolian and Guinean biogeographic zones. Speciation probability was assessed by using 11 mitochondrial and nuclear genes, and cranial morphology for over 100 specimens, representing the full geographical extent of the species distribution. Molecular Bayesian and phylogenetic species delimitation showed unanimous support for two Mecistops species isolated to the Upper Guinean and Congo (including Lower Guinean) biomes that were supported by 13 cranial characters capable of unambiguously diagnosing each species. Fossil-calibrated phylogenetic reconstruction estimated that the species split ± 6.5–7.5 Ma, which is congruent with intraspecies divergence within the sympatric crocodile genus Osteolaemus and the formation of the Cameroon Volcanic Line. Our results underscore the necessity of comprehensive phylogeographic analyses within currently recognized taxa to detect cryptic species within the Crocodylia. We recommend that the community of crocodilian researchers reconsider the conceptualization of crocodilian species especially in the light of the conservation ramifications for this economically and ecologically important group.     

Resilient forest faunal communities in South Africa: a legacy of palaeoclimatic change and extinction filtering?

Aim To examine the influence of climatic extinction filtering during the last glacial maximum (LGM; c. 18,000 yr bp ) and of the subsequent recolonization of forest faunas on contemporary assemblage composition in southern African forests. Location South Africa, Mozambique, Swaziland, Zimbabwe. Methods Data comprised presence/absence by quarter‐degree grid cell for forest‐dependent and forest‐associated birds, non‐volant mammals and frogs. Twenty‐one forest subregions were assigned to one of three previously identified forest types: Afrotemperate, scarp, and Indian Ocean coastal belt. Differences among forest types were examined through patterns and gradients of species richness and endemism, assemblage similarity, species turnover, and coefficients of species dispersal direction. The influence of contemporary environment on assemblage composition was investigated using partial canonical correspondence analysis. Several alternative biogeographical hypotheses for the recolonization of forest faunas were tested. Results Afrotemperate faunas are relatively species‐poor, have low species turnover, and are unsaturated and infiltrated by generalist species. In northern and central regions, communities are supplemented by recolonization from scarp forest refugia, and among frogs by autochthanous speciation in localized refugia. Scarp faunas are relatively species‐rich, contain many forest‐dependent species, have high species turnover, and overlap with coastal and Afrotemperate faunas. Coastal forests are relatively species‐rich with high species turnover. Main conclusions Afrotemperate communities were affected most by climatic extinction filtering events. Scarp forests were Afrotemperate refugia during the LGM and are a contemporary overlap zone between Afrotemperate and coastal forest. Coastal faunas derive from post‐LGM colonization along the eastern seaboard from tropical East African refugia. The greatest diversity is achieved in scarp and coastal forest faunas in northern KwaZulu–Natal province. This historical centre of diversity has influenced the faunal diversity of nearly all other forests in South Africa. The response of vertebrate taxa to large‐scale, historical processes is dependent on their relative mobility: forest birds best illustrate patterns resulting from post‐glacial faunal dispersal, while among mammals and frogs the legacy of climatic extinction filtering remains stronger.     

Effects of forest modification on bird community composition and seed removal in a heterogeneous landscape in South Africa

Human disturbance threatens and modifies forest ecosystems worldwide. Previous studies have investigated the effects of human impact on local bird communities in disturbed forests, but we still lack information on how bird species richness and ecological processes respond to different forest modifications present at a landscape scale. In a heterogeneous South African landscape, we chose six types of indigenous scarp forest, differing in the intensity of human disturbance: continuous natural forests and natural forest fragments in nature reserves, forest fragments in eucalyptus plantations, fragments in the agricultural matrix, forest gardens and secondary forests in game reserves. In 36 study sites, we investigated the bird community using point counts and observed the seed removal of birds at the native tree species Celtis africana. Species richness did not differ among the forest types, but abundance varied significantly with most birds observed in fragments in the agricultural matrix, forest gardens, and secondary forests. The higher bird abundance in these forests was mainly due to forest generalists, shrubland and open country species whereas forest specialists were rarely present. Changes in species composition were also confirmed by multivariate analysis which clearly separated bird communities by forest type. Frugivore abundance in C. africana was highest in natural forest fragments, fragments in the agricultural matrix, forest gardens and secondary forests. The same trend was found for the estimated total number of fruits removed per C. africana tree, though the differences among forest types were not significant. Consequently, modified forests seem to maintain important ecological functions as they provide food sources for generalist species which may, due to their mobility, enhance natural plant regeneration. However, we could show that protected forest habitats are important refugees for specialist species sensitive to human disturbance.     

Introduction by the Chairman

Tropical forest ecosystems are the world's richest and most complex habitats and globally recognised for their importance in the human survival. Birds constitute an important component of tropical forests, not only in terms of their diversity, but also in terms of their role in the ecosystem. However, despite great advances made in our knowledge and protection of tropical forest birds, our efforts remain inadequate, particularly in Africa. African forests are being cut down by a very high rate (4 million hectare disappearing per year), putting at risk so many bird species, that the first challenge for research and conservation is to help managers in identifying priorities.

The relationship emphasised by the theme of the PAOC 9 “Birds, Habitats and People” is well examined during the symposium on the “Conservation of Forest Birds in Afiica”. The papers presented cover a wide range of topics. A broad scale analysis on the congruence between forest birds and mammals (Neil et al.) compares species richness and species endemism in the Afrotropical region. Larison et al. compare avian biodiversity of montane forest birds of northern Cameroon and Bioko island and evaluate their conservation potential based on species richness and human impacts and attitudes. A similar approach is done by Waiyaki and Bennun on birds of coastal forests in southern Kenya, while Math et al. examine the distribution the east Coast Akalat Sheppardia gunningi sokokensis in one single forest of Arabuko-Sokoke. The major threat to tropical forests today is the selective logging. The effect of this issue is presented by Dranzoa in a case study from Uganda's Kibale National Park.

Results of these papers show the necessity to take into account the particular requirements of all species in the management of the forest, the socio-cultural considerations in implementation of conservation measures, the necessity of policy changes in some cases and the necessity of further research.     

An interplay between forest and non‐forest South American avifaunas suggested by a phylogeny of lepidocolaptes woodcreepers (dendrocolaptinae)

Very few South American avian superspecies or species groups are composed of both forest and non‐forest taxa. The genus Lepidocolaptes comprises 8–9 species of woodcreepers, most of which are forest birds, but two species, L. angustirostris and L. souleyetii, inhabit open vegetations. Therefore, this genus should play an important role in the discussion about the relationships between forest and non‐forest South American avifaunas. Nucleotide sequences from two mitochondrial genes, cytochrome b and ND2, suggest that: (i) L. fuscus should be removed from the genus since its association with other members of this genus is poorly supported. This view has been pointed out also by morphological and behavioural data; (ii) the phylogenetic position of the open‐vegetation species within the Lepidocolaptes radiation indicate that the split between forest and non‐forest elements within this genus took place as recently as two million years ago. This result suggests that the evolutionary relationships between forest and non‐forest biotas in South America may have been more dynamic than previously thought.     

Forest/environment relationships in Yosemite National Park,California, USA

Forest compositional patterns in Yosemite National Park, California, were related to environmental factors through numerical classification of forest types, arrangement of forest types along elevational and topographic gradients, and development of regression models relating basal area of common tree species to environmental variables. The eight forest types are differentiated primarily by elevation zone and secondarily by topographic setting. Lower montane forests (1200–1900 m) were divided into the Abies concolor/Calocedrus type occurring primarily on mesic sites and the Pinus ponderosa/Calocedrus type predominantly on xeric sites. Upper montane forests (1900–2500 m) included the Abies concolor/Abies magnifica type on mesic sites, the Abies magnifica/Pinus type on somewhat more xeric sites, and Juniperus occidentalis/Pinus jeffreyi woodlands on granitic domes. Subalpine forests (2500–3300 m) embraced three types: Tsuga mertensiana/Pinus forests on mesic sites, monotypic Pinus contorta forests on drier sites, and Pinus albicaulis/Pinus contorta groves at treeline. Regression models consistently included elevation and soil magnesium content as explanatory variables of species basal area totals. The two Abies spp. were negatively correlated with soil magnesium levels, whereas other montane species (e.g. Calocedrus decurrens, Pinus lambertiana, and Pinus ponderosa) exhibited positive correlation with soil magnesium. Topography and soil physical properties were only infrequently incorporated into species regression models.Abbreviations DBH= diameter at breast height (1.4 m) - DCA= detrended correspondence analysis - TWINSPAN= two-way indicator species analysis     

Molecular systematics of Alethe,Sheppardia and some other African robins (Muscicapoidea)

Phylogenetic relationships between species of akalats (Sheppardia) and alethes (Alethe) were derived from mitochondrial and nuclear sequence data, and phylogeographic pattern was also investigated in three widespread species (two Alethe and one Sheppardia) endemic to the African lowland rainforest biome. Co-distributed species of Alethe and Sheppardia showed similar spatial relationships between the Guineo-Congolian biome and the Western Rift mountains, and preliminary area relationships are shown for species of Sheppardia and Alethe distributed in the Cameroon highlands, the woodland areas north and south of the lowland forest block, and east African montane and lowland forest. Within widespread species, phylogeographic pattern was generally similar, with long branches between Upper and Lower Guinea populations, and between eastern and western Congolian populations. At the interspecific level, the nuclear intron used gave more resolution than the mitochondrial data, which gave poor resolution at basal nodes. While the affinities of some species groups were weakly supported, no support was suggested for the monophyly of Alethe and little for Sheppardia as those genera are currently circumscribed, and taxonomic changes are suggested. As found by previous workers, monophyletic clades corresponding to Muscicapini and Saxicolini of Sibley and Ahlquist (1990) were not recovered, and the membership of any monophyletic 'African forest robin assemblage' needs to be resolved.     

Unrecognized and imperilled diversity in an endemic barb (Smiliogastrini,Enteromius) from the Fouta Djallon highlands

The Upper Guinean Forests of Guinea, Sierra Leone and Liberia contain high levels of freshwater biodiversity. The Guinean Range and associated Fouta Djallon highlands separate two biogeographical provinces in the region and served as a refugium during past climatic fluctuations. While many species of freshwater fishes are restricted to one biogeographical province or the other, some are reported to occur on both sides of the divide. Here, we examine the molecular and morphological diversity of an endemic small African barb, Enteromius foutensis, reported to occur in both provinces. This integrative analysis revealed unrecognized diversity and suggests recent, or ongoing, events that facilitated geodispersal and subsequent divergence in the region. The molecular analysis revealed three divergent and well‐supported populations within E. foutensis. Accounting for allometric shape variation allowed us to observe diagnostic morphological differences among the populations. Enteromius foutensis sensu stricto is restricted to the Little Scarcies drainage in Guinea and northern Sierra Leone. Our study revealed two candidate species distinct from E. foutensis. One is likely a narrow endemic restricted to a small area in the Konkouré River basin; the other candidate species inhabits the upper Senegal and Gambie River drainages. How these patterns of diversity compare with other freshwater species from the Fouta Djallon highlands and the conservation status of these candidate species are also discussed.     

A reconsideration of the Lower Guinean species of Sericanthe (Rubiaceae,Coffeeae), with four new species from Cameroon and Gabon

The genus Sericanthe was established and its species were revised 30 years ago by one of the authors. Intensive recent botanical collecting in Lower Guinea (mainly southern Cameroon, Equatorial Guinea and Gabon) has made a reconsideration of species in this area necessary. Revision of the newly collected Lower Guinean herbarium specimens of Sericanthe (twice as many as were available at the time of the first revision) has brought four new species to light, namely S. gabonensis and S. mpassa from Gabon, S. lowryana from Cameroon and S. rabia from Cameroon and Gabon. Distributional data are much augmented, and distributional maps of all species from the area are provided. Four species were reported to be newly recorded for at least one country. The occurrence of the novelties in the main diversity centre of the genus is discussed in the context of the chorology of the entire genus Sericanthe. A first estimation of the conservation status for the new species is given. A synopsis of the genus Sericanthe in Lower Guinea with a taxonomic key is provided. © 2012 The Linnean Society of London, Botanical Journal of the Linnean Society, 2012, 169 , 530–554.     

High diversity of pipistrelloid bats (Vespertilionidae: Hypsugo,Neoromicia, and Pipistrellus) in a West African rainforest with the description of a new species

The pipistrelloid bats (genera Hypsugo, Neoromicia, and Pipistrellus) of Africa have been poorly studied, partly as a result of problems associated with species identification. This paper examines the diversity of pipistrelloid bats from Mount Nimba, a biodiversity hotspot in the Upper Guinean rainforest zone. Traditional morphometrics, the structure of the baculum, and sequences of the cytochrome oxidase subunit I (COI) gene were used to identify taxa. Species richness was exceptionally high and included at least ten taxa identifiable on molecular grounds. Of these, existing names could be assigned to six taxa. A seventh taxon was described as a species new to science, Neoromicia roseveari sp. nov. , and was distinguished on molecular grounds, craniodental morphology, and baculum structure. The remaining taxa may refer to as‐yet undescribed species but we lacked sufficient material to formally describe them here. The high species richness of pipistrelloid bats on Mount Nimba may be associated with the transition zone from lowland rainforest to moist savannah. © 2013 The Linnean Society of London     

STUDIES OF CARBONIFEROUS FUNGI. II. THE STRUCTURE AND ORGANIZATION OF MYCOCARPON,SPOROCARPON, DUBIOCARPON,AND COLEOCARPON (ASCOMYCOTINA)

The problematic organism, Sporocarpon, was among the first fossil fungi to be described. The genus was actually a heterogeneous assemblage of fungal forms, and was eventually divided into several taxa including Sporocarpon, Dubiocarpon, and Mycocarpon. In the present paper these organisms, as well as a similar, previously undescribed genus, Coleocarpon; are described from Lower, Middle, and Upper Pennsylvanian strata in North America, and from Upper Carboniferous sediments in England. Although initially considered to be radiolarian-like protozoa, these structures show far more similarity to ascomycetous cleistothecia. All forms are ornamented, spherical bodies with a complex wall which encloses scattered asci and ascospores. Taxa are distinguished primarily by differences in the organization of the cleistothecial wall. Structurally similar organisms are found today among the Eurotiales.     

A tale of the nearly tail‐less: the effects of Plio‐Pleistocene climate change on the diversification of the African avian genus Sylvietta

Sylvietta is a broadly distributed group of African species inhabiting a wide range of habitats and presents an interesting opportunity to investigate the historic mechanisms that have impacted the biogeography of African avian species. We collected sequence data from 50 individuals and used model‐based phylogenetic methods, molecular divergence estimates and ancestral area estimates to construct a time‐calibrated phylogeny and estimation of biogeographic history. We estimate a southern African origin for Sylvietta, with an initial divergence splitting the genus into two clades. The first consists of arid‐adapted species, with a southern African origin and subsequent diversification north into Ethiopia–Somalia. The second clade is estimated as having a Congolian forest origin with an eastward pattern of colonization and diversification as a result of Plio‐Pleistocene forest dynamics. Additionally, two members of the genus Sylvietta display interesting patterns of intraspecific diversification. Sylvietta rufescens is an arid‐adapted species inhabiting southern Africa, and we recover two subclades with a divergence dating to the Pleistocene, a unique pattern for avian species which may be explained via isolation in arid habitat fragments in the early Pleistocene. Second, Sylvietta virens, a species endemic to Afro‐tropical forests, is recovered with geographically structured genetic diversification across its broad range, an interesting result given that recent investigations of several avian forest species have found similar and substantial geographically structured genetic diversity relating to Plio‐Pleistocene forest fragmentation. Overall, Plio‐Pleistocene habitat cycling played a significant role in driving diversification in Sylvietta, and this investigation highlights the substantial impact of climate‐driven habitat dynamics on the history of sub‐Saharan species.     

THE ULTRASTRUCTURE OF PALEOZOIC FERN SPORES: I. BOTRYOPTERIS

The spores of four species of the Paleozoic filicalean fern Botryopteris are examined at the ultrastructural level. Spores of B. cratis, B. forensis, B. globosa, and an unnamed species from the Lower Pennsylvanian, are compared on the basis of sporoderm stratification and the presence or absence of a sculptine layer. The species examined differ widely as to the type of reproductive unit in which they are borne and include forms that range throughout the Pennsylvanian. In all species the exine is homogeneous, lacking cavities and lamellae. A thin nexine is present in the Middle and Upper Pennsylvanian taxa, but is absent in the Lower Pennsylvanian spores. Only one spore type (B. cratis) possesses a clearly defined sculptine layer. Features of the sporoderm are compared with those of extant, homosporous pteridophyte spores.