Phylogeography of the Eurasian Willow Tit (Parus montanus) based on DNA sequences of the mitochondrial cytochrome b gene

The phylogeographic relationships of the trans-Palearctic Willow Tit assemblage were studied by obtaining sequence data from the mitochondrial cytochrome b gene from 34 specimens representing nine subspecies from across the species range. Four distinct genetic groups were identified: Parus montanus weigoldicus, P. m. affinis, P. m. songarus, and a clade containing six Eurasian subspecies (ssp. baicalensis, borealis, montanus, restrictus, rhenanus, and sachalinensis). P. m. weigoldicus, P. m. affinis, and P. m. songarus were reciprocally monophyletic and separated from each other and other subspecies by uncorrected genetic distances between 1.9 and 5.8%. The remaining six subspecies were closely related and shared mitochondrial haplotypes, despite marked morphological and acoustical differences, suggesting a rapid evolution of distinct vocalization patterns. The current classification splitting the species into the songarus and montanus subspecies groups is not concordant with our phylogeny. Also, the four regiolect groups, Lowland, Alpine, Siberian, and Sino-Japanese, are not fully mirrored in the phylogeny. Our data suggest that the mono-frequency song type may be ancestral and was retained over a long evolutionary time in certain populations, but was altered or camouflaged by learning processes in others.     

The Identity of Simulium murmanum Enderlein, 1935 (Diptera: Simuliidae)

The identity of Simulium murmanum is re-established by designation of lectotype and paralectotype. The species is common and widespread in the northern Holarctic Region and has up to now been reported from the Nearctic Region as S. corbis and from the Palaearctic Region as S. relictum (and S. rostratum, auct., nec Lundstrüm).     

DO THE SIBERIAN TITS PARUS CINCTUS IN SCANDINAVIA AND SIBERIA SPEAK THE SAME LANGUAGE?

ABSTRACT

The vocabulary of Siberian tits Parus cinctus in South Norway and East Siberia is compared by means of tape recordings and spectrograms. The species has many different calls that are greatly confused in the literature. In this paper ten main call types are examined. On the whole, the equivalent utterings are geographically so similar that a distinction is usually impossible or questionable. This similarity also applies to the contextual use of the calls. Consistent structural differences in certain calls were nevertheless found. The sit foraging call embraced on average a broader frequency range and was of a slightly longer duration in Siberia than in Norway. The complex ‘gargle’ system could at both places be divided into three main groups equally represented in the populations: (1) trilled, (2) tonal and (3) simple gargles. The tonal gargles are characterized by a terminal tonal element (T) that varies in shape. In Norway, tonal gargles terminating with an even or upslurred T dominated, in Siberia those with a chevron-formed T. Historically, the west-east distribution throughout Eurasia was apparently continuous until quite recently, allowing an effective gene flow. Considering the huge distance from Norway to East Siberia and the markedly resident behaviour of the Siberian tit, it is nevertheless somewhat unexpected that so few vocal differences have evolved. Several of the calls of the Siberian tit are structurally very similar to equivalent (most likely homologous) calls in other species belonging to the subgenus Poecile, e.g. the willow tit Parus montanus and the black-capped chickadee P. atricapillus, suggesting that the multicall repertoire of their common ancestor remained largely intact despite Poecile's differentiation into different species.     

Reproductive isolation and cryptic introgression in a sky island enclave of Appalachian birds

Reproductive isolation is central to the speciation process, and cases where the strength of reproductive isolation varies geographically can inform our understanding of speciation mechanisms. Although generally treated as separate species, Black‐capped chickadees (Poecile atricapillus) and Carolina chickadees (P. carolinensis) hybridize and undergo genetic introgression in many areas where they come into contact across the eastern United States and in the northern Appalachian Mountains. The Great Smoky Mountains harbor the last large breeding population of atricapillus in the southern Appalachians, isolated from the species’ main range by nearly 200 km. This population is believed to be reproductively isolated from local carolinensis due to an unusual, behaviorally mediated elevational range gap, which forms during the breeding season and may function as an incipient reproductive isolating mechanism. We examined the effectiveness of this putative isolating mechanism by looking for genetic introgression from carolinensis in Great Smoky Mountain atricapillus. We characterized this population and parental controls genetically using hundreds of amplified fragment length polymorphism (AFLP) loci as well as mitochondrial DNA (mtDNA) sequence data from cytochrome‐b. Great Smoky Mountain atricapillus have experienced nuclear genetic introgression from carolinensis, but at much lower levels than other populations near the hybrid zone to the north. No mitochondrial introgression was detected, in contrast to northern contact areas. Thus, the seasonal elevational range gap appears to have been effective in reducing gene flow between these closely related taxa.     

Parasites of grass flies (Diptera, Chloropidae) from the order hymenoptera in the Holarctic region

Hymenopterous parasitoids of grass flies of the family Chloropidae from the Palaearctic and Nearctic regions are reviewed. These parasitoids belong to four superfamilies and 16 families of Hymenoptera and were reared from 39 species of Chloropidae in the Palaearctic (less than 6% of the fauna) and only from 10 species in the Nearctic Region. The majority of parasitoids are oligo-or polyphagous species. To a certain degree, the parasitoids are specialized on one of the three host groups: (1) species developing in shoots of cereal and meadow grasses; (2) forest species developing in cones of coniferous trees; and (3) species associated with the common reed, Phragmites australis. In the Palaearctic Region, the majority of parasitoids (91 species) were reared from Oscinella frit L. s. 1.; a significantly smaller number of these parasites is known from this host in the Nearctic Region, nearly half of the parasitoids being common for both regions. The next large group of parasitoids is associated with gall-inducing species of the genus Lipara Meigen (59 species) developing in the common reed. By contrast with two other groups of parasitoids, this one includes many species of the family Ichneumonidae. It should be noted that taxonomic diversity at the third trophic level is markedly greater than at the second level.     

Differential effects of climate and species interactions on range limits at a hybrid zone: potential direct and indirect impacts of climate change

The relative contributions of climate versus interspecific interactions in shaping species distributions have important implications for closely related species at contact zones. When hybridization occurs within a contact zone, these factors regulate hybrid zone location and movement. While a hybrid zone''s position may depend on both climate and interactions between the hybridizing species, little is known about how these factors interact to affect hybrid zone dynamics. Here, we utilize SDM (species distribution modeling) both to characterize the factors affecting the current location of a moving North American avian hybrid zone and to predict potential direct and indirect effects of climate change on future distributions. We focus on two passerine species that hybridize where their ranges meet, the Black‐capped (Poecile atricapillus) and Carolina (P. carolinensis) chickadee. Our contemporary climate models predict the occurrence of climatically suitable habitat extending beyond the hybrid zone for P. atricapillus only, suggesting that interspecific interactions primarily regulate this range boundary in P. atricapillus, while climatic factors regulate P. carolinensis. Year 2050 climate models predict a drastic northward shift in suitable habitat for P. carolinensis. Because of the greater importance of interspecific interactions for regulating the southern range limit of P. atricapillus, these climate‐mediated shifts in the distribution of P. carolinensis may indirectly lead to a range retraction in P. atricapillus. Together, our results highlight the ways climate change can both directly and indirectly affect species distributions and hybrid zone location. In addition, our study lends support to the longstanding hypothesis that abiotic factors regulate species'' poleward range limits, while biotic factors shape equatorial range limits.     

A multilocus study of pine grosbeak phylogeography supports the pattern of greater intercontinental divergence in Holarctic boreal forest birds than in birds inhabiting other high-latitude habitats

Aim Boreal forest bird species appear to be divided into lineages endemic to each northern continent, in contrast to Holarctic species living in open habitats. For example, the three-toed woodpecker (Picoides tridactylus) and the winter wren (Troglodytes troglodytes) have divergent Nearctic and Palaearctic mitochondrial DNA clades. Furthermore, in these species, the next closest relative of the Nearctic/Palaearctic sister lineages is the Nearctic clade, suggesting that the Palaearctic may have been colonized from the Nearctic. The aim of this study is to test this pattern of intercontinental divergence and colonization in another Holarctic boreal forest resident – the pine grosbeak (Pinicola enucleator). Location The Holarctic. Methods We sequenced the mitochondrial ND2 gene and Z-specific intron 9 of the ACO1 gene for 74 pine grosbeaks collected across the Holarctic. The sequences were used to reconstruct the phylogeographical history of this species using maximum likelihood analysis. Results We discovered two distinct mitochondrial and Z-specific lineages in the Nearctic and one in the Palaearctic. The two Nearctic mtDNA lineages, one in the northern boreal forest and one in south-western mountain forest, were more closely related to each other than either was to the Palaearctic clade. Two Nearctic Z-chromosome clades were sympatric in the boreal and south-western mountain forests. Unlike the topology of the mtDNA tree, the relationship among the Z-chromosome clades was the same as in the three-toed woodpecker and winter wren [Nearctic (Nearctic, Palaearctic)]. The Palaearctic Z-chromosome clade had much lower genetic diversity and a single-peak mismatch distribution with a mean < 25% of that for either Nearctic region, both of which had ragged mismatch distributions. Main conclusions Our data suggest that, similar to the other boreal forest species, the pine grosbeak has divergent lineages in each northern continent and could have colonized the Palaearctic from the Nearctic. Compared with many Holarctic birds inhabiting open habitats, boreal forest species appear to be more differentiated, possibly because the boreal forests of the Nearctic and Palaearctic have been isolated since the Pliocene (3.5 Ma).     

SPECIATION IN NORTH AMERICAN CHICKADEES: I. PATTERNS OF mtDNA GENETIC DIVERGENCE

We surveyed mitochondrial DNA haplotype divergence within and between populations of six species of North American chickadees (Parus, Subgenus Poecile) with the following results. (1) Genotype diversities (range 0.3 to 0.7) and low nucleotide diversities (range 3 to 27 × 10^?4) within populations were typical of known vertebrates. (2) The two widespread, northern species (atricapillus and hudsonicus) exhibit little mtDNA genetic differentiation throughout their previously glaciated continental distributions, most likely because of recent, postglacial range expansions. (3) Newfoundland populations of atricapillus and maritime province (Newfoundland plus Nova Scotia) populations of hudsonicus have distinct mtDNA haplotypes which differ from continental haplotypes by single restriction site changes. (4) Haplotypes of the southeastern U.S. species P. carolinensis divide into eastern and western sets which have diverged by three percent. This heretofore unrecognized, divided population structure may correspond to the Tombigbee River/ Mobile Bay disjunction known in some other vertebrate taxa. (5) Allopatric populations of the southwestern species sclateri and gambeli exhibit divergences of one and three percent respectively. (6) Prevailing interspecific divergence distances of three to seven percent suggest speciation early in the Pleistocene rather than during late (e.g., Wisconsin) glaciations. (7) Phylogenetic analyses suggest that North American taxa include two clades, hudsonicus-rufescens-sclateri versus carolinensis-atricapillus-gambeli and that carolinensis and atricapillus are not sister species.     

How cold‐adapted flightless flies dispersed over the northern hemisphere: phylogeny and biogeography of the snow fly genus Chionea Dalman (Diptera: Limoniidae)

A phylogeny of the 37 known species and subspecies of the micropterous snow fly genus Chionea Dalman is presented using adult morphological characters. The genus contains two major clades: a strictly Palaearctic clade, and a combined Nearctic‐Palaearctic clade with representatives in the Nearctic and Western Palaearctic regions. As there is little congruence between the recovered phylogeny of Chionea and the currently used subgeneric division in Chionea s.s. and Sphaeconophilus Becker, we propose to abandon the use of subgeneric taxa in Chionea. A strictly morphological analysis appears to be insufficient to fully resolve the phylogeny of the genus at the species level, and future molecular work should provide additional evidence for the establishment of relationships among the members of Chionea. The large‐scale historical biogeography of Chionea was analysed using dispersal‐vicariance analysis. The initial distribution area of the genus probably extended in the Eastern Palaearctic, and the Nearctic and the origin of Chionea could be dated in the Late Cretaceous. The various dispersal and vicariance events that led to the major speciation events in the genus are set against major paleogeographic developments. The ancestor of the Western Palaearctic group in the second major clade originated from the Nearctic. The presence of the cold‐adapted Chionea in currently temperate to warm climatic zones in the southern parts of its distribution was analysed using ecological niche modelling. It appears that prolonged periods of climate cooling, as occurred during the Last Glacial Maximum, enabled Chionea to cover large parts of central and southern Europe and reach the southern distribution areas where the genus is present today. A similar biogeographic pattern was less evident in the Nearctic region.     

The great tit (Parus major) – a misclassified ring species

The great tit (Parus major) has been considered to be the most typical example of an avian ring species. The terminal taxa of the ring (major and minor sectors) are supposed to be reproductively isolated in a zone of secondary contact in the middle Amur valley, Siberia. Our study combines molecular markers (cytochrome‐b), bioacoustic analyses and morphological characters to judge the ring species status of the great tit complex. Despite a notable percentage of intermediately coloured birds in the mixed population of middle Amur, a lack of mitochondrial introgression between the major and minor sectors and a small number of true hybrids among voucher specimens from this area suggest at least a partial reproductive barrier between both sectors. In contrast, variation of morphological and especially acoustic characters along the ring‐shaped area and the phylogenetic structure of the P. major group do not match the ring species concept. Bioacoustic and molecular data (cytochrome‐b sequences) reveal two large and closely related subspecies blocks, the sectors major and bokharensis in the Western Palaearctic and central Asia, and the sectors minor and cinereus in the Eastern Palaearctic and South‐east Asia, respectively. The two western sectors diverged only recently (0.5 Mya) and they were separated from the eastern group by Pleistocene events about 1.5 Mya. Songs from allopatric regions of the two subspecies blocks differ distinctly in frequency parameters and element composition. In the area of secondary contact, males of all phenotypes share the same frequency range of song, close to the range of the typical minor song. Hybrids and major males sing mixed repertoires of typical major and minor strophe types as well as mixed strophes. In contrast, phenotypic minor males display only pure minor strophes. Differences in mate choice and mating success based on repertoire size are believed to uphold the reproductive barrier between major and minor birds in the area of sympatry. Taxonomic consequences suggest three separate species in the Parus major complex: Parus major s.s. (including the very closely related bokharensis sector), Parus minor and Parus cinereus. © 2005 The Linnean Society of London, Biological Journal of the Linnean Society, 2005, 86 , 153–174.     

A new species of the bristletail genus Pedetontus silv. (Thysanura, Machilidae) from Thailand

A new bristletail species, Pedetontus phuketi sp. n., is described from Phuket Island, Thailand. It is most similar to P. hainanensis Yu, Zhang W.-W. et Zhang J.-Y., 2010 described from Hainan Island (China). The genus Pedetontus comprises 33 described species in two subgenera: Pedetontus s. str. (6 species) and Verhoeffilis (27 species). The subgenus Verhoeffilis has originated in the southeastern part of the Palaearctic Region. Its representatives migrated to North America in the Paleocene through the Bering Land Bridge which was sunken in the Eocene, so that the Nearctic centre of Pedetontus speciation became isolated and the subgenus Pedetontus s. str. has been formed. The Bering Land Bridge was formed at the end of the Miocene, and the backward migration of bristletails of the subgenus Pedetontus s. str. from the Nearctic to the Palaearctic occurred. Pedetontus palaearcticus was formed on Kamchatka. The southward migration of bristletails of the subgenus Verhoeffilis has led to formation of 10 Indo-Malayan species.     

Piophila megastigmata McAlpine 1978 (Diptera: Piophilidae): the first record from northern Africa of this forensically relevant fly

Piophila megastigmata McAlpine (Diptera: Piophilidae) is recorded for the first time from Algeria, northern Africa. This is the first Palaearctic record of the species outside the Iberian Peninsula, and the only record from Africa apart from its type locality in eastern South Africa. The current report extends significantly the known distribution in the Palaearctic Region of a species of forensic interest and of potential economic importance as a food pest.     

Pugs of the tribe Eupitheciini (Lepidoptera,Geometridae): the history of study and distribution over biogeographic regions

The World fauna of the tribe Eupitheciini is the most species-rich in the family Geometridae. This tribe includes about 1900 species (almost 3000 species-group names) from 47 genera; about one third of the genera (15) are monotypic. The generic diversity of Eupitheciini is the highest in the Australian (38 genera, 11 of them endemic) and Oriental regions (32 genera, 4 endemic) and the lowest in the Neotropical Region (possibly one genus only). The faunas of different biogeographic regions can be arranged in following order by their species richness: the Palaearctic (487 species), Oriental (397), Neotropical (346), Australian (251), Afrotropical (198), and Nearctic Regions (166 species). Eupithecia is the most species-rich genus in the family Geometridae and the entire order Lepidoptera, and one of the largest genera in the whole World fauna of insects. The greatest number of species of this genus is recorded in the Palaearctic Region (466 species), where Eupithecia accounts for about 95% of the tribe Eupitheciini. The mainland of the Oriental Region (especially the Himalayas) is also very species-rich; however the proportion of the Eupithecia representatives decreases towards Malaysia, Sundaland, and the Australian Region (about 2% of the tribe). The Eupitheciini faunas have the greatest similarity at the generic level between the Oriental and Australian Regions (the Jaccard and Sørensen coefficient values being 0.62 and 0.77, respectively). The Palaearctic fauna is more similar to the Afrotropical and Oriental faunas at the genus-group level. On the whole, the fauna of the Nearctic Region is similar to that the West Palaearctic, with the exception of the fact that representatives of the genera Gymnoscelis and Chloroclystis are absent in North America, although two endemic genera Nasusina and Prorella are present. At the genus-group level, the Nearctic fauna of Eupitheciini is more similar to the Neotropical (the Jaccard and Sørensen coefficients 0.20 and 0.33, respectively) than to the Palaearctic fauna (0.17 and 0.29). The number of synonymies is very high in the tribe Eupitheciini because of the homogeneity of this group, whose species are difficult to identify without the use of elaborate anatomical techniques. Modern revisions, catalogues, surveys, and atlases on Eupitheciini are absent for many countries and large geographic regions. Revisions of pugs of the tribe Eupitheciini for some biogeographic regions are extremely difficult because of fragmentation of entomological collections including the type specimens of many species-group taxa. A large fraction of synonyms is characteristic of parts of the World with the best known faunas: Europe (64% of synonyms) and North America (39%). On the contrary, the lowest levels of synonymy are typical of the less known faunas of the regions situated at the equatorial latitudes, namely the Neotropical (9%) and Afrotropical (8%) ones.     

Spatiotemporally consistent genomic signatures of reproductive isolation in a moving hybrid zone

Studies of hybrid zone dynamics often investigate a single sampling period and draw conclusions from that temporal snapshot. Stochasticity can, however, result in loci with spurious outlier patterns, which is exacerbated by limited temporal or geographic sampling. Comparing admixed populations from different geographic regions is one way to detect repeatedly divergent genomic regions potentially involved in reproductive isolation. Temporal comparisons also allow us to control partially for the role of stochasticity, but the power of temporal sampling has not yet been adequately explored. In North America, black‐capped (Poecile atricapillus) and Carolina (P. carolinensis) chickadees hybridize in a contact zone extending from New Jersey to Kansas. The hybrid zone is likely maintained by strong intrinsic selection against hybrids, and it is moving north. We used a reduced representation genomic approach and temporally spaced sampling—two samples of ～80 individuals separated by a decade—to determine the pattern and consistency of selection and genomic introgression in the chickadee hybrid zone. We report consistently low introgression for highly divergent loci between P. atricapillus and P. carolinensis in this moving hybrid zone. This is strong evidence that these loci may be linked to genomic regions involved in reproductive isolation between chickadees.     

The chromosomes of Lepturinae (Coleoptera: Cerambycidae) II. A study of eight more species,with focus on Desmocerus palliatus

Following the study of 28 species of Lepturinae (Coleoptera: Cerambycidae) the karyotypes of seven additional Palaearctic and one Nearctic species are established. The 19,X male karyotypes found in genera Stictoleptura (four species), Vadonia and Judolia (one species each) confirm the loss of Y chromosome in Lepturini. The 22,XY male karyotype of Cortodera humeralis is very close to that of some species of Rhagiini (genera Gaurotes, Acmaeops, Dinoptera, all 22,XY) and Grammoptera ruficornis (24,XY) recently reported. We propose that these taxa could form a monophyletic group within Rhagiini. The karyotype of the Nearctic species Desmocerus palliates (23,neoXneoXneoY) is quite different and characterized by the presence of many acrocentric chromosomes and a complex autosome–gonosome translocation. Its particular karyotype is compatible with its present classification within a separate tribe, the Desmocerini.     

DNA barcoding and morphology reveal three cryptic species of Anania (Lepidoptera: Crambidae: Pyraustinae) in North America,all distinct from their European counterpart

Anania coronata (Hufnagel), a Holarctic species of pyraustine crambid moth, has long been treated as having two geographically separated subspecies – the nominotypical Anania coronata in the Palaearctic Region and Anania coronata tertialis (Guenée) in the Nearctic Region. Maximum likelihood and Bayesian inference analysis of mitochondrial DNA barcodes both recover four well‐supported, reciprocally monophyletic groups within Anania coronata. Qualitative and quantitative analyses of genital structures reveal diagnostic differences that correspond to the four barcode lineages. On the basis of both molecular and morphological evidence, we conclude that Anania coronata is actually a complex of four species. Anania coronata (Hufnagel) is restricted to Europe, whereas three species occur in North America: Anania tertialis (Guenée), Anania plectilis (Grote & Robinson) and Anania tennesseensis sp.n. Yang.     

Experimental data on the life-cycle of Petasiger grandivesicularis Ishii, 1935 (Trematoda: Echinostomatidae)

Larval stages of an echinostome were found in Planorbis planorbis in a brackish water lake on the Black Sea coast of Bulgaria. The cercaria is a large-tailed form with 19 collar spines. The life-cycle was completed in the laboratory using aquarium-reared fishes (Lebistes reticulatus, Puntius tetrazona tetrazona, P. pentazona pentazona, P. nigrofasciatus, Carassius auratus auratus and Xiphophorus helleri) as second intermediate hosts and canaries as definitive hosts. The redia, cercaria, metacercaria and experimentally reared adults are described. The species is determined as Petasiger grandivesicularis Ishii, 1935, and its cercaria is compared in detail with those of related forms. A key to the known large-tailed echinostome cercariae from the Palaearctic Region is presented.     

A re-evaluation of the phylogeny of Parelaphostrongylus Boev & Schulz, 1950 (Nematoda: Protostrongylidae)

The phylogeny of the genus Parelaphostrongylus was reconstructed using Elaphostrongylus rangiferi as an outgroup. Parelaphostrongylus is monophyletic and divided into two clades, one containing the meningeal worm, P. tenuis of white-tailed deer, and the other consisting of two muscle-inhabiting forms, P. andersoni and P. odocoilei of white-tailed and mule deer, respectively. Differences in biological features, including tissue migration route and prepatent period, are mapped onto the cladogram and discussed. Phylogenetic relationships among the host group, the Cervidae, are reviewed. It is suggested that E. rangiferi evolved in a Palaearctic cervid. Parelaphostrongylus probably co-speciated with Nearctic deer, Odocoileus spp. Host-switching from O. virginianus may explain the widespread occurrence of P. andersoni in Rangifer in North America.     

Conspecific olfactory preferences and interspecific divergence in odor cues in a chickadee hybrid zone

Understanding how mating cues promote reproductive isolation upon secondary contact is important in describing the speciation process in animals. Divergent chemical cues have been shown to act in reproductive isolation across many animal taxa. However, such cues have been overlooked in avian speciation, particularly in passerines, in favor of more traditional signals such as song and plumage. Here, we aim to test the potential for odor to act as a mate choice cue, and therefore contribute to premating reproductive isolation between the black‐capped (Poecile atricapillus) and Carolina chickadee (P. carolinensis) in eastern Pennsylvania hybrid zone populations. Using gas chromatography–mass spectrometry, we document significant species differences in uropygial gland oil chemistry, especially in the ratio of ester to nonester compounds. We also show significant preferences for conspecific over heterospecific odor cues in wild chickadees using a Y‐maze design. Our results suggest that odor may be an overlooked but important mating cue in these chickadees, potentially promoting premating reproductive isolation. We further discuss several promising avenues for future research in songbird olfactory communication and speciation.