Hierarchical status and colour preference in Nile tilapia (<Emphasis Type="Italic">Oreochromis niloticus</Emphasis>)

We studied the colour preference of isolated Nile tilapia (Oreochromis niloticus) and whether previous residence or body size can affect environmental colour choice. In the first phase, a cylindrical tank was divided into five differently coloured compartments (yellow, blue, green, white and red), a single fish was introduced into the tank and the frequency at which this fish visited each compartment was recorded over a 2-day study period. An increasingly larger fish (approx +2 cm in length each time) was then added into the tank on each of days 3, 5 and 7 (=four fish in the tank by day 7), and the frequency at which each fish visited the different compartments of the tank was observed twice a day to obtain visit frequency data on the differently sized fishes. This experiment was replicated six times. In the first phase, the solitary fish established residence inside the yellow compartment on the first and second days. Following the introduction of a larger fish, the smaller fish was displaced from the occupied compartment. Nile tilapia possibly shows this preference for yellow as a function of its visual spectral sensitivity and/or the spectral characteristics of its natural environment. Moreover, body size is an important factor in determining hierarchical dominance and territorial defence, and dominant fish chose the preferred environmental colour compartment as their territory.     

Complete mitochondrial DNA sequences of the Nile tilapia (<Emphasis Type="Italic">Oreochromis niloticus</Emphasis>) and Blue tilapia (<Emphasis Type="Italic">Oreochromis aureus</Emphasis>): genome characterization and phylogeny applications

Cichlid fishes have played an important role in evolutionary biology and aquaculture industry. Nile tilapia (Oreochromis niloticus), blue tilapia (Oreochromis aureus) and Mozambique tilapia (Oreochromis mossambicus), the useful models in studying evolutionary biology within Cichlid fishes, are also mainly cultured species in aquaculture with great economic importance. In this paper, the complete nucleotide sequence of the mitochondrial genome for O. niloticus and O. aureus were determined and phylogenetic analyses from mitochondrial protein-coding genes were conducted to explore their phylogenetic relationship within Cichlids. The mitogenome is 16,625 bp for O. niloticus and 16,628 bp for O. aureus, containing the same gene order and an identical number of genes or regions with the other Cichlid fishes, including 13 protein-coding genes, two rRNA genes, 22 tRNA genes and one putative control region. Phylogenetic analyses using three different computational algorithms (maximum parsimony, maximum likelihood and Bayesian method) show O. niloticus and O. mossambicus are closely related, and O. aureus has remotely phylogenetic relationship from above two fishes.     

Quantifying the genetic parameters of feed efficiency in juvenile Nile tilapia <Emphasis Type="Italic">Oreochromis niloticus</Emphasis>

Background

Improving feed efficiency in fish is crucial at the economic, social and environmental levels with respect to developing a more sustainable aquaculture. The important contribution of genetic improvement to achieve this goal has been hampered by the lack of accurate basic information on the genetic parameters of feed efficiency in fish. We used video assessment of feed intake on individual fish reared in groups to estimate the genetic parameters of six growth traits, feed intake, feed conversion ratio (FCR) and residual feed intake in 40 pedigreed families of the GIFT strain of Nile tilapia, Oreochromis niloticus. Feed intake and growth were measured on juvenile fish (22.4 g mean body weight) during 13 consecutive meals, representing 7 days of measurements. We used these data to estimate the FCR response to different selection criteria to assess the potential of genetics as a means of increasing FCR in tilapia.

Results

Our results demonstrate genetic control for FCR in tilapia, with a heritability estimate of 0.32?±?0.11. Response to selection estimates showed FCR could be efficiently improved by selective breeding. Due to low genetic correlations, selection for growth traits would not improve FCR. However, weight loss at fasting has a high genetic correlation with FCR (0.80?±?0.25) and a moderate heritability (0.23), and could be an easy to measure and efficient criterion to improve FCR by selective breeding in tilapia.

Conclusion

At this age, FCR is genetically determined in Nile tilapia. A selective breeding program could be possible and could help enabling the development of a more sustainable aquaculture production.

     

Microcystin concentrations in Nile tilapia (<Emphasis Type="Italic">Oreochromis niloticus</Emphasis>) caught from Murchison Bay,Lake Victoria and Lake Mburo: Uganda

Catches of the economically important Nile tilapia (Oreochromis niloticus L.) from two eutrophic tropical lakes in Uganda, Lake Mburo and Murchison Bay, Lake Victoria, were examined to determine the presence of microcystins (MCs) in gut, liver and muscle of the fish. Analysis for MCs (RR, LR and YR) in both fish and water samples was by liquid chromatography coupled with mass spectroscopy (LC-MS) method. Physico-chemical parameters were also measured to establish the status of both lakes. MC-RR was the most prominent MC detected in Lake Mburo and Murchison Bay samples, there was no evidence of significant seasonal variation in the concentration of MCs in fish tissue. MCs were detected in all water samples from both study lakes. The mean concentration of MCs in water was found higher in dry times for Lake Mburo (P < 0.05) and higher in wet times for Murchison Bay (P < 0.05). MC concentrations in the fish guts were positively related with MC concentrations in water samples from Murchison bay (P < 0.05), no such correlation was found in Lake Mburo. In eutrophic tropical lakes, fish seem to have a high tolerance to the toxicity of cyanotoxins including MCs. However, there is a possibility of accumulating these toxins in their tissue with the threat of transferring them higher up in the food chain. Due to a low sample size and short sampling period, the results can only serve to highlight the potential risk of MC accumulation in Nile tilapia in these lakes. Further studies are needed for the purpose of risk assessment.     

Genetic parameters for growth performance,fillet traits,and fat percentage of male Nile tilapia (<Emphasis Type="Italic">Oreochromis niloticus</Emphasis>)

Improvement of fillet traits and flesh quality attributes are of great interest in farmed tilapia and other aquaculture species. The main objective of this study was to estimate genetic parameters for fillet traits (fillet weight and fillet yield) and the fat content of fillets from 1136 males combined with 2585 data records on growth traits (body weight at 290 days, weight at slaughter, and daily weight gain) of 1485 males and 1100 females from a third generation of the Aquaamerica tilapia strain. Different models were tested for each trait, and the best models were used to estimate genetic parameters for the fat content, fillet, and growth traits. Genetic and phenotypic correlations were estimated using two-trait animal models. The heritability estimates were moderate for the fat content of fillets and fillet yield (0.2–0.32) and slightly higher for body weight at slaughter (0.41). The genetic correlation between fillet yield and fat was significant (0.6), but the genetic correlations were not significant between body weight and fillet yield, body weight and fat content, daily weight gain and fillet yield, and daily weight gain and fat content (? 0.032, ? 0.1, ? 0.09, and ? 0.4, respectively). Based on the genetic correlation estimates, it is unlikely that changes in fillet yield and fat content will occur when using growth performance as a selection criterion, but indirect changes may be expected in fat content if selecting for higher fillet yield.     

First Year Ontogenetic Diet Patterns in Two Coexisting <Emphasis Type="Italic">Sander</Emphasis> Species, <Emphasis Type="Italic">S. lucioperca</Emphasis> and <Emphasis Type="Italic">S. volgensis</Emphasis> in Lake Balaton

First year ontogenetic diet patterns and size-dependent diet partitioning of two coexisting piscivorous percids, pikeperch and Volga pikeperch were analysed in Lake Balaton. Diet patterns of the two pikeperches followed a common trend, catching larger preys at larger sizes, but in details they were different. Until 20–30 mm size age-0 pikeperch fed on planktonic microcrustaceans and were found only in the pelagic zone. After this size, from the end of May, a part of the stock shifted habitat and moved to the littoral zone to feed on Limnomysis benedeni. Majority of the stock stayed in the pelagic zone and shifted to Leptodora kindtii. In the pelagic group early piscivory, mainly cannibalism, occurred only sporadically. However, the few individuals that reached 100 mm size during the first year were typically piscivorous. Volga pikeperch stayed in the pelagic zone during the first year and shifted from planktonic microcrustaceans to benthic macroinvertebrates. General patterns of the first year diet ontogeny were similar in the different areas of Lake Balaton in both pikeperches with only some differences in the secondary food resources, especially in the share of chironomids. Chironomids were eaten at highest ratio by the two fish species in the Keszthely basin in accordance with their abundance pattern. Maximum prey sizes increased significantly with predator size in both pikeperch and Volga pikeperch. However, pikeperch ate much larger prey than did Volga pikeperch at the same size although they have a similar mouth gape to length ratio. These two, closely related pikeperches, although occur in the same habitat and have similar patterns of diet ontogeny, effectively partition food resources in Lake Balaton during the first growing season, except in the very beginning of their ontogeny at L = 5–10 mm size. It appears that age-0 Volga pikeperch is not a significant competitor for the economically highly rated pikeperch in Lake Balaton. On the other hand, it is age-0 pikeperch that might affect Volga pikeperch during its early ontogeny, in the planktivorous stage.     

Ocular dimensions and cone photoreceptor topography in adult Nile Tilapia <Emphasis Type="Italic">Oreochromis niloticus</Emphasis>

Information on the anatomy of the eye and the topography of cone photoreceptor cells in the retina is presented for the Nile Tilapia (Oreochromis niloticus). In adults, the shape and proportions of the ocular components of the prominent eye conform to the general form of fish eyes, as determined using cryo-sectioned eyes. The lens is approximately spherical and there is little variation in the distance from the centre of the lens to the border between the choroid and retina at a range of angles about the optical axis. The average ratio of the distance from the centre of the lens to the retina: lens radius (Matthiessen’s ratio) is 2.44:1. In retinal wholemounts, single and double (twin) cone photoreceptors, forming a square mosaic, are present. Peak photoreceptor densities for both morphological cone types are found in the temporal retina. Using peak cone densities and estimates of focal length from cryo-sectioned eyes, visual acuity is calculated to be 5.44 cycles per deg. The lack of apparent specific ocular or retinal specializations and the relatively low visual acuity reflect the lifestyle of the Nile Tilapia and may allow it to adapt to changes in visual environment in its highly variable natural habitat as well as contributing to the ‘ecological flexibility’ of this species.     

Anthropogenic impacts on the contextual morphological diversification and adaptation of Nile tilapia (<Emphasis Type="Italic">Oreochromis niloticus</Emphasis>, L. 1758) in East Africa

Nile tilapia occurs naturally in East Africa where it’s an economically important species. Many of the natural populations of Nile tilapia have been affected by anthropogenic activities including translocations, associated with programmes aimed at enhancing capture fisheries and aquaculture productivity. Using geometric morphometric analyses, we tested the hypothesis that such anthropogenic activities have augmented admixture among natural populations of Nile tilapia and influenced the geographical distribution of morphological variation within the species. Our expectation was that Nile tilapia shape divergent might be consistent with reportedly anthropogenic activities in nonnative environments. To test this hypothesis, we analyzed the shapes of 490 individuals from thirteen populations; three farms, six natives and four nonnative natural populations. Our analysis revealed that the most pronounced shape diversification was observed in seven populations; three nonnatives (Victoria, Kyoga and Sindi farm) and four natives (Albert, River Nile, George and Turkana). The features responsible for the observed morphotypes were mainly related to the orientation of the anterior region of the fish and may be due to diversifying selection in response to new environmental pressures (for nonnative populations), admixture or drift. Shape change in the nonnative high-altitude populations was unexpectedly conserved, suggesting recent introductions which may have not resulted in admixture or there was strong selection against change in the traits measured. On the other hand, the recorded morphotypic clusters explained the possible genetic link to their putative ancestral home. Our results were partially consistent with our prediction that the nonnative populations exhibited divergent morphotypes. We recommend further investigations with molecular genetics for follow-up of these findings.     

Ontogenetic shifts in phenotype–environment associations in Nile perch,Lates niloticus (Perciformes: Latidae) from Lake Nabugabo,Uganda

Habitat‐associated trait divergence may vary across ontogeny if there are strong size‐related shifts in selection pressures. We quantified patterns of phenotypic divergence in Nile perch (Lates niloticus) from ecologically distinct wetland edge and forest edge habitats in Lake Nabugabo, Uganda, and we compared patterns of divergence across three size classes to determine whether trends are consistent through Nile perch ontogeny. We predicted that inter‐habitat variation in biotic (e.g. vegetation structure) and abiotic (e.g. dissolved oxygen concentration) variables may create divergent selective regimes. We compared body morphology using geometric morphometrics and found substantial differences between habitats, although not all trends were consistent across size classes. The most striking aspects of divergence in small Nile perch were in mouth orientation, head size, and development of the caudal region. Medium‐sized Nile perch also showed differences in mouth orientation. Differences in large individuals were related to eye size and orientation, as well as caudal length. The observed patterns of divergence are consistent with functional morphological predictions for fish across divergent trophic regimes, high and low predation environments, and complex and simple habitats. Although this suggests adaptive divergence, the source of phenotypic variation is unknown and may reflect phenotypic plasticity and/or genetic differences. © 2013 The Linnean Society of London, Biological Journal of the Linnean Society, 2013, 110 , 449–465.     

Feeding behavior and responsivity to food odors in Nile tilapia <Emphasis Type="Italic">Oreochromis niloticus</Emphasis> (Cichlidae) after chronic polisensory deprivation

The paper reports the study of the food searching behavior in the Nile tilapia Oreochromis niloticus before and after the experimental anosmia combined with visual deprivation. The threshold concentration of the water extract of the common food organisms (Chironomidae larvae) was found for the tilapia with intact olfaction to be 10^–4 g/L, which allows this fish to search for food under the restriction of visual reception. The food searching behavior in response to food odors is completely lost as a result of irreversible anosmia and do not be restored after a 4.5-month period even for the high concentrations of the extract (10^–1–10^–2 g/L). These findings point to the absence of external taste buds on the head, body, and fins, or to their extremely low numbers. It is assumed that tactile sense also plays a significant role in the food search and prey location in the Nile tilapia.     

Reproductive biology of ningu, <Emphasis Type="Italic">Labeo victorianus</Emphasis> (Pisces : Cyprinidae), in the Kagera and Sio Rivers,Uganda

Synopsis We investigated aspects of the reproductive biology of the cyprinid fish, Labeo victorianus, locally known as ningu, in the Kagera and Sio Rivers, Uganda. These rivers represent the last remaining refuges for this species within Uganda. L. victorianus is a highly fecund, potamodrometic fish that migrates upstream to spawn. Spawning is generally synchronised with the bimodal water level maxima observed within the rivers. There were, however, some deviations from this pattern. We caught sexually mature fish throughout the year in the Sio River, and noticed that spawing started before the second rainfall peak. Fish from the Kagera matured at significantly larger sizes than fish from the Sio River. Male and female fish, from both rivers, fed intensively during the non-breeding months accumulating significant fat reserves; a probable energy storage mechanism prior to their spawning migrations. The differences between the populations is probably a phenotypic response to differing abiotic factors such as river size, flow velocity and food availability.     

New species in <Emphasis Type="Italic">Barleria</Emphasis> sect. <Emphasis Type="Italic">Stellatohirta</Emphasis> (<Emphasis Type="Italic">Acanthaceae</Emphasis>) from Africa

Summary  Three new species are described in Barleria L. sect. Stellatohirta M. Balkwill from tropical Africa: B. aristata from south-central Tanzania, B. aenea from south-western Tanzania and northeast Zambia, and B. purpureotincta from south-western Zambia. Their affinities and conservation status are discussed.     

Ectopic expression of cucumber (<Emphasis Type="Italic">Cucumis sativus</Emphasis> L.) <Emphasis Type="Italic">CsTIR</Emphasis>/<Emphasis Type="Italic">AFB</Emphasis> genes enhance salt tolerance in transgenic <Emphasis Type="Italic">Arabidopsis</Emphasis>

Auxin receptors TIR1/AFBs play an essential role in a series of signaling network cascades. These F-box proteins have also been identified to participate in different stress responses via the auxin signaling pathway in Arabidopsis. Cucumber (Cucumis sativus L.) is one of the most important crops worldwide, which is also a model plant for research. In the study herein, two cucumber homologous auxin receptor F-box genes CsTIR and CsAFB were cloned and studied for the first time. The deduced amino acid sequences showed a 78% identity between CsTIR and AtTIR1 and 76% between CsAFB and AtAFB2. All these proteins share similar characteristics of an F-box domain near the N-terminus, and several Leucine-rich repeat regions in the middle. Arabidopsis plants ectopically overexpressing CsTIR or CsAFB were obtained and verified. Shorter primary roots and more lateral roots were found in these transgenic lines with auxin signaling amplified. Results showed that expression of CsTIR/AFB genes in Arabidopsis could lead to higher seeds germination rates and plant survival rates than wild-type under salt stress. The enhanced salt tolerance in transgenic plants is probably caused by maintaining root growth and controlling water loss in seedlings, and by stabilizing life-sustaining substances as well as accumulating endogenous osmoregulation substances. We proposed that CsTIR/AFB-involved auxin signal regulation might trigger auxin mediated stress adaptation response and enhance the plant salt stress resistance by osmoregulation.     

<Emphasis Type="Italic">Ty</Emphasis>1<Emphasis Type="Italic">/copia</Emphasis>- and <Emphasis Type="Italic">Ty</Emphasis>3<Emphasis Type="Italic">/gypsy</Emphasis>-like DNA sequences in <Emphasis Type="Italic">Helianthus </Emphasis>species

Two repeated DNA sequences isolated from a partial genomic DNA library of Helianthus annuus, p HaS13 and p HaS211, were shown to represent portions of the int gene of a Ty3 /gypsy retroelement and of the RNase-Hgene of a Ty1 /copia retroelement, respectively. Southern blotting patterns obtained by hybridizing the two probes to BglII- or DraI-digested genomic DNA from different Helianthus species showed p HaS13 and p HaS211 were parts of dispersed repeats at least 8 and 7 kb in length, respectively, that were conserved in all species studied. Comparable hybridization patterns were obtained in all species with p HaS13. By contrast, the patterns obtained by hybridizing p HaS211 clearly differentiated annual species from perennials. The frequencies of p HaS13- and p HaS211-related sequences in different species were 4.3x10(4)-1.3x10(5) copies and 9.9x10(2)-8.1x10(3) copies per picogram of DNA, respectively. The frequency of p HaS13-related sequences varied widely within annual species, while no significant difference was observed among perennial species. Conversely, the frequency variation of p HaS211-related sequences was as large within annual species as within perennials. Sequences of both families were found to be dispersed along the length of all chromosomes in all species studied. However, Ty3 /gypsy-like sequences were localized preferentially at the centromeric regions, whereas Ty1/ copia-like sequences were less represented or absent around the centromeres and plentiful at the chromosome ends. These findings suggest that the two sequence families played a role in Helianthusgenome evolution and species divergence, evolved independently in the same genomic backgrounds and in annual or perennial species, and acquired different possible functions in the host genomes.