细胞外囊泡及细胞外囊泡数据库

细胞外囊泡（extracellular vesicle,EV）是由细胞释放到细胞外微环境的膜性囊泡,携带母细胞来源分子,参与机体的生理和病理活动过程,鉴定其组成并研究其功能已成为研究热点。目前,对不同物种、不同组织和不同细胞来源的细胞外囊泡组份的研究,获得了大量的蛋白质、核酸、脂类和其他分子数据。为更好地使用这些数据,已有不同的研究机构建立了相应的数据库,为该领域的研究提供了便利。ExoCarta、Vesiclepedia和Evpedia数据库是目前收录数据比较全面的、最具影响力的细胞外囊泡数据库。本文将介绍这3个数据库的特点和应用,为研究者选择使用胞外囊泡数据库提供参考。     

The roar of the lionfishes Pterois volitans and Pterois miles

Through the analysis of acoustic recordings of captive Pterois spp., this study has confirmed anecdotal evidence that Pterois spp. are soniferous. This report of sound production in Pterois spp. provides the foundation for future research into their specific acoustic capabilities including sound production mechanisms, the role of social behaviour and applied techniques for controlling and monitoring invasive Pterois spp. in the tropical and temperate western Atlantic Ocean.     

Show the data, don't conceal them

Current standards of data presentation and analysis in biological journals often fall short of ideal. This is the first of a planned series of short articles, to be published in a number of journals, aiming to highlight the principles of clear data presentation and appropriate statistical analysis. This article considers the methods used to show data, in particular the value of the dot plot, and methods to summarise the distribution of values. The uses of measures such as standard deviation, standard error of the mean, and confidence intervals are contrasted.     

Kiss-and-run, collapse and 'readily retrievable' vesicles

Two models of synaptic vesicle recycling have been intensely debated for decades: kiss‐and‐run, in which the vesicle opens and closes transiently, presumably through a small fusion pore, and full fusion, in which the vesicle collapses into the plasma membrane and is retrieved by clathrin‐coat‐dependent processes. Conceptually, it seems that kiss‐and‐run would be faster and would retrieve vesicles with greater fidelity. Is this the case? This review discusses recent evidence for both models. We conclude that both mechanisms allow for high fidelity of vesicle recycling. Also, the presence in the plasma membrane of a depot of previously fused vesicles that are already interacting with the endocytotic machinery (the ‘readily retrievable’ vesicles) allows full fusion to trigger quite fast endocytosis, further blurring the efficiency differences between the two models.     

Evaluating the function of the male harbour seal, Phoca vitulina, roar through playback experiments

The aim of this study was to evaluate the role of vocalizations produced during the breeding season by the male harbour seal, an aquatically breeding pinniped. During the spring of 1999, playback experiments were conducted at eight locations in Elkhorn Slough, California, U.S.A. Through an underwater speaker, we presented male harbour seals with three acoustic stimuli: a long-duration, low-frequency roar (LL), a short-duration, high-frequency roar (SH) and amplified water noise (control). Male responses to the playback boat were characterized by increased approach rates and aggressive flipper slapping during 62.5% of SH sessions (N=8), 25% of LL sessions (N=8) and 0% of control sessions (N=8). No more than one identifiable seal responded during each playback location. We observed no responses by female harbour seals to playbacks. We conclude from these experiments that territorial male harbour seals use roars given by intruders to locate and challenge intruders.     

Adapted to roar: functional morphology of tiger and lion vocal folds

Vocal production requires active control of the respiratory system, larynx and vocal tract. Vocal sounds in mammals are produced by flow-induced vocal fold oscillation, which requires vocal fold tissue that can sustain the mechanical stress during phonation. Our understanding of the relationship between morphology and vocal function of vocal folds is very limited. Here we tested the hypothesis that vocal fold morphology and viscoelastic properties allow a prediction of fundamental frequency range of sounds that can be produced, and minimal lung pressure necessary to initiate phonation. We tested the hypothesis in lions and tigers who are well-known for producing low frequency and very loud roaring sounds that expose vocal folds to large stresses. In histological sections, we found that the Panthera vocal fold lamina propria consists of a lateral region with adipocytes embedded in a network of collagen and elastin fibers and hyaluronan. There is also a medial region that contains only fibrous proteins and hyaluronan but no fat cells. Young's moduli range between 10 and 2000 kPa for strains up to 60%. Shear moduli ranged between 0.1 and 2 kPa and differed between layers. Biomechanical and morphological data were used to make predictions of fundamental frequency and subglottal pressure ranges. Such predictions agreed well with measurements from natural phonation and phonation of excised larynges, respectively. We assume that fat shapes Panthera vocal folds into an advantageous geometry for phonation and it protects vocal folds. Its primary function is probably not to increase vocal fold mass as suggested previously. The large square-shaped Panthera vocal fold eases phonation onset and thereby extends the dynamic range of the voice.     

Freeze-Etching of Azotobacter vinelandii: Examination of Wall, Exine, and Vesicles

The structure of the cell wall, the arrangement of the cyst exine, and the origin and distribution of intine vesicles in Azotobacter vinelandii ATCC 12837 were examined by freeze-etching and conventional electron microscopic techniques. In the vegetative organism the cell wall appears to have a woven texture which disappears during cyst formation. The exine is composed of two different types of material: the outer layer is a fibrous, amorphous layer, and the numerous inner layers form the basic hexagonal structures which unite to form the cyst coat. The presence of intine vesicles in the encysting organism was confirmed in frozen-etched cells. The appearance of frozen-etched cells and cysts and the distribution of capsular material indicate that extracellular polysaccharide is an important factor in cyst formation.