亚洲玉米螟幼虫体内酚氧化酶原激活蛋白酶cDNA片段的克隆与序列分析

为研究亚洲玉米螟Ostrinia furnacalis (Guenée)幼虫体内酚氧化酶原激活蛋白酶（prophenoloxidase activating proteinase, PAP）表达调控的分子机理, 本研究根据不同昆虫酚氧化酶原激活蛋白酶基因序列的保守区域, 设计合成简并引物, 采用RT-PCR技术从亚洲玉米螟5龄幼虫中扩增出PAP的一段cDNA片段, 大小为509 bp, 编码169个氨基酸, 预测分子量为18.7 kD, 理论等电点(pI值)为5.1。该基因序列中含有丝氨酸蛋白酶样结构域中保守的催化三联体, 不含发夹结构域。BlastP分析结果表明: 该片段的氨基酸序列与烟草天蛾Manduca sexta PAP-3和冈比亚按蚊Anopheles gambiae发夹型蛋白B1的氨基酸序列一致性最高, 为47%; 与烟草天蛾PAP-2、家蚕Bombyx mori PPAE、 斜纹夜蛾Spodoptera litura PPAE-3、 蓖麻蚕Samia cynthia ricini PAP和黑腹果蝇Drosophila melanogaster丝氨酸蛋白酶7的氨基酸序列的一致性分别为45%, 45%, 44%, 43%和41%。构建系统发育树, 对其进化关系进行了初步分析, 结果显示: 亚洲玉米螟PAP与烟草天蛾PAP-3和斜纹夜蛾PPAE-3的亲缘关系较近, 与黑腹果蝇丝氨酸蛋白酶7和冈比亚按蚊发夹型蛋白B1的亲缘关系较远。这些结果说明克隆得到的cDNA片段为亚洲玉米螟幼虫PAP基因靠近羧基端的部分序列。     

Influence of SO2 and NO2 Exposure on Glutathione, Superoxide Dismutase and Glutathione Reductase Activities in Scots Pine Needles

A 50-year-old Pinus sylvestris L. stand was exposed for 2 yearsto low concentrations of SO₂ and NO₂ in an open-air exposureexperiment in northern Sweden. The mean SO₂ concentrations inthe centre of the exposed plot during the 1988 exposure from14 June to 25 September, and during the 1989 exposure from 6June to 30 September were 15 nl 1^–1 and 12 nl 1^–1,respectively. The corresponding values for NO₂ were 15 nl 1^–1and 10 nl 1^–1, respectively. The concentration in thecontrol plot was never higher than a few ppb, and mostly below1 nl 1^–1. Needles sampled from the SO₂ and NO₂-exposed area showed reducedactivities of glutathione reductase (GR; EC 1.6.4.2 [EC] ) and superoxidedismutase (SOD; EC 1.15.1.1 [EC] ) compared with controls. The GRactivity showed decreased levels in autumn and winter, whilethe exposure had ceased, and SOD showed decreased activity duringthe second summer of exposure. Neither membrane-bound nor water-solubleanti-oxidants such as -tocopherol, carotenoids or glutathionechanged due to the exposure. The sulphur/nitrogen ratio wasincreased in needles that were exposed to SO₂ and NO₂ implyinga changed nutrition balance. The results suggest that the capacityof SOD and GR in the ascorbate-glutathione pathway was reduceddue to the exposure to air pollutants. Key words: Anti-oxidants, -tocopherol, glutathione, pigments, Pinus sylvestris L     

日本通草蛉cDNA文库构建及部分ESTs分析

本研究以日本通草蛉Chrysoperla nipponensis (Okamoto)为材料,采用Oligo(dT)引物定向克隆构建cDNA文库并进行EST序列测定,旨在以基因库的形式进行种质资源的保存,为其遗传改良奠定基础,并为探讨其分类地位提供分子依据。对该文库质量分析表明：库容量为1.0×10⁶,重组率为80.0％,平均插入片段为512 bp。测序后最终成功得到323条表达序列标签（expressed sequence tags,ESTs）序列,经Phrap程序聚类拼接后得到236条单基因簇（unigene）,包括86个重叠群（congtigs）和150个单拷贝（singlets）。使用NCBI中的BlastN和BlastX程序对236条ESTs进行本地化搜索,BlastN的结果表明：180条ESTs（76.3%）没有注解,56条ESTs（23.7%）与GenBank上公布的序列有较高的同源性,其中一条序列被确定为该种的16S rRNA基因,利用MEGA软件构建了基于该16S rRNA序列草蛉科的系统发育树,结果显示通草蛉属Chrysoperla与叉草蛉属Dichochrysa、玛草蛉属Mallada、草蛉属Chrysopa的亲缘关系比较近,这与传统分类相吻合。BlastX的比对结果为197条ESTs（83.5%）有功能注解,39条ESTs（16.5%）无注解或score值小于100。使用GO(gene ontology)数据库对236条ESTs序列进行功能注释,结果表明：142条ESTs（59.7％）有注解,并表达出40多种基因产物。     

华北大黑鳃金龟两种围食膜蛋白cDNA的分子克隆与序列分析

本文以华北大黑鳃金龟Holotrichia oblita中肠为材料,依据Stratagene公司文库构建试剂盒方法,构建其中肠cDNA表达文库,该文库滴度为1.9×106 pfu/mL,重组率为99.97%。依据现代免疫学原理,利用棉铃虫Helicoverpa armigera围食膜蛋白多克隆抗体筛选文库,得到两个编码华北大黑鳃金龟围食膜蛋白的cDNA克隆Ho-Peritrophin1与Ho-Peritrophin2,其cDNA长分别为2 385 bp和1 633 bp,在PolyA末端上游各有3个多聚腺苷酸信号序列AATAAA,最长开放阅读框(ORF)分别编码729个和477个氨基酸,与粉纹夜蛾Trichoplusia ni CBP2(chitin binding protein 2)的相似性最高,分别为21.9%和19.1%。结构域分析表明,Ho-Peritrophin1与Ho-Peritrophin2分别具有9个和6个几丁质结合功能域,只含有较少的O-糖基化位点,不含有类粘蛋白结构域。胰蛋白酶和胰凝乳蛋白酶对两种蛋白的作用位点主要位于几丁质结合功能域(chitin binding domain, CBD)内部,而因受几丁质结合功能域保护,这两种蛋白能够抵抗这些蛋白酶的降解。与正常CBD比较,这两种蛋白C端的CBD只含有4个Cys,只在第1与第3、第4与第5个Cys之间形成两对二硫键,缺少由第2与第6个Cys形成的二硫键。推测其N端还应包括信号肽序列和几丁质结合功能域的未知序列。     

Isolation and Mapping of a Family of Putative Zinc-finger Protein cDNAs from Rice

To understand the functions of rice homologues of the Arabidopsisflowering-time gene CONSTANS (CO) and salt-tolerance gene STO,we performed a similarity search of the single-run sequencedata of cDNA clones accumulated by the Rice Genome ResearchProgram, and isolated seven rice cDNA clones (S3574, C60910,S12569, R2931, R1479, R1577, and E10707) coding for proteinscontaining one or two zinc-finger-like motifs. Comparison ofthe deduced amino acid sequences between these cDNAs and theCO gene revealed significant similarities (46%-;61%) in theregion of zinc-finger motifs. A domain having a high contentof basic amino acids at the C-terminus of the CO protein wasfound in the corresponding region of proteins predicted fromcDNAs S3574, C60910, and S12569. Two amino acid sequences, "CCADEAAL"and "FCV(L)EDRA," which were present inside each zinc-fingerin the Arabidopsis regulatory protein STO, were also found ineach of the two zinc-finger regions of proteins predicted fromcDNAs R2931, R1479, R1577, and E10707. Using restriction fragmentlength polymorphism (RFLP) linkage analysis, we determined thechromosomal location of the seven cDNA clones. The positionof R2931 on the RFLP linkage map was closely linked to Hd-3,one of the putative quantitative trait loci (QTL) controllingheading date in rice.     

Identification of G proteins mediating fungal elicitor-induced dephosphorylation of host plasma membrane H+ -ATPase

Tomato cells (with the Cf-5 resistance gene) were treated withelicitor preparations containing the avr5 gene product fromtwo Cf-5 incompatible races of the fungal pathogen Cladosporiumfulvum (race 2.3 and race 4), or with elicitor preparationscontaining no avr5 gene product from two Cf-5 compatible races(race 5 and race 2.4.5.9 [EC] .11). Elicitor preparations from race2.3 or race 4 caused dephosphorylation of host plasma membraneH⁺ -ATPase in isolated plasma membranes, while the preparationsfrom race 5 or race 2.4.5.9 [EC] .11 did not. GTP()S, AlF₄^–and cholera toxin (CTX) each induced similar dephosphorylationin the absence of active elicitors. The elicitor-induced dephosphorylationof the H⁺ -ATPase was blocked by preincubation of membraneswith an antibody raised against a stimulatory G protein -subunit(anti-G_s This antibody cross-reacted with a 42 kDa polypeptidefrom tomato plasma membranes. A 42 kDa polypeptide was alsoADP-ribosylated by CTX. When plasma membranes were treated withelicitor preparations from race 4 and separated on non-dissociatingPAGE, two proteins were detected on Western blots with the antibodyraised against the -subunit, suggesting the dissociation ofthe trimeric complex. No dissociation of the complex was detectedwith antibodies raised against either the - or ß-subunitswhen the plasma membranes were treated with elicitor preparationsfrom race 5. The results provide evidence for the activationof a stimulatory subtype of trimeric G proteins in the stimulationof elicitor-induced host defences to fungal pathogens. Key words: G protein, dephosphorylation, H⁺ -ATPase, fungal elicitor, tomato     

Comparative Studies of Acid Glycosidases from Three Legumes

The major isoenzymes of -mannosidase (EC 3.2.1.24 [EC] ) and ß-galactosidase(ECf 3.2.1.23 [EC] ) have been separated from cotyledons of gardenpea, Pisum sativum L. (Vicieae), chick pea, Cicer arietinumL. (Cicereae), and cowpea, Vigna unguiculata (L.) Walp. (Phaseoleae).Some of their properties have been determined, including pHoptima, K_m values for p-nitrophenyl glycosidc substrates, andthe effects of several inhibitors. Swainsonine, an indolizidinealkaloid, was the most effective inhibitor of mannosidase 1,with I₃₀ values of 5.6 x 10^–8 M (cowpea), 1x 10^–7M (chick pea) and 2.9 x 19^–7 M (pea). The most effectiveinhibitor of ß-galactosidase 2 from all sources wasD-galactonic acid-1,4-lactonwe (-lactone), with K_i values rangingbetween 3.0 and 3.9x 10^–3 M. An inhibitor of the E. coliß-galactosidose, p-aminophenyl thio-ß-D-galactopyranoside,did not inhibit any of the legume ß-galctosidases;rather it enhanced the activites of the enzymes from chick peaand cowpea cotyledons. Etiolated hull and seed tissues frompea pods developing in darkness contained similar acid glycosidaseactivities to normal green tissues, thus the chloroplast isan unlikely location for ß-galactosidase 2. The majorß-galactosidasesdetected with an indigogenic substrate (5-bromo-4-chloro-3-indoxyl-ß-D-galactopyranoside)following gel electrophoresis of extracts from pea hull, seedcoats and cotyledons appeared to be different from ß-galactosidase2. Acid glycosidase, cotyledon, isoenzyme, -lactone, legume, swainsonine     

烟夜蛾组织蛋白酶B酶原基因的克隆、序列分析和原核表达

利用反转录多聚酶链式反应（RT-PCR）技术从烟夜蛾Helicoverpa assulta (Guenée)雌虫卵巢中扩增得到了组织蛋白酶B酶原基因（cathepsin B,CB）cDNA片段,将其克隆至pMD19-T载体。测序结果表明, 该片段长度为1 017 bp,含有组织蛋白酶B酶原基因完整开放阅读框架（ORF）（GenBank登录号：EF154237）。序列分析结果显示：烟夜蛾组织蛋白酶B（HassCB）编码338个氨基酸残基,预测N-末端含有长度为21个氨基酸残基的信号肽序列;去除信号肽序列后,预测成熟蛋白分子量为35.5 kDa,等电点为5.96。氨基酸序列比对结果表明,HassCB与其他昆虫的组织蛋白酶B酶原氨基酸序列有较高的一致性。将去除信号肽序列的HassCB（HassCBa）重组到表达载体pGEX-4T-1中,并转入原核细胞中表达,SDS-PAGE和Western印迹分析表明：该基因能在大肠杆菌BL21中表达,电泳检测到一条大约61 kDa的目的条带,与预测的融合蛋白分子量相符。用该基因制备多克隆抗体并测得该抗体对重组表达的HassCBa的效价为1∶51 200。通过免疫印迹检测证实,此抗体既能识别重组表达的HassCBa,又能识别烟夜蛾卵巢匀浆液中的HassCB。     

棉铃虫细胞色素P450 CYP6B7基因的克隆与融合表达

细胞色素P450 CYP6B7被推测与棉铃虫Helicoverpa armigera对拟除虫菊酯类杀虫剂的抗性有关,但至今尚无CYP6B7参与杀虫剂代谢方面的直接证据。为揭示CYP6B7的代谢功能,作者以棉铃虫幼虫基因组DNA 为模板,以CYP6B7基因设计特异性引物,扩增出包含321 bp内含子的CYP6B7基因。用反向PCR的方法消除内含子,获得包含完整的CYP6B7基因的开放阅读框。将CYP6B7基因与pMAL-c2X载体连接,并转化E.coli TB1细胞,在IPTG诱导下,CYP6B7能与载体基因编码的麦芽糖结合蛋白（MBP）在大肠杆菌中融合表达,表达产物经直链淀粉（amylose） 柱亲和层析分离洗脱后,得到SDS-PAGE电泳纯的融合蛋白。     

Antioxidant enzyme responses to chilling stress in differentially sensitive inbred maize lines

Antioxidant enzyme activities were determined at the first,third and fifth leaf stages of four inbred lines of maize (Zeamays L.) exhibiting differential sensitivity to chilling. Plantswere exposed to a photoperiod of 16:8 L:D for one of three treatments:(a) control (25C), (b) control treatment plus an exposure toa short-term chilling shock (11C 1 d prior to harvesting),and (c) long-term (11 C constant) chilling exposure. Catalase(CAT; EC 1.11.1.6 [EC] ), ascorbate peroxidase (ASPX; EC 1.11.1.11 [EC] ),superoxide dismutase (SOD; EC 1.15.1.1 [EC] ), glutathione reductase(GR; EC 1.6.4.2 [EC] ), and mono-dehydroascorbate reductase (MDHAR;EC 1.6.5.4 [EC] ) activities were assessed. Reducing and non-reducingsugars and starch concentrations were determined as generalmetabolic indicators of stress. Reduced activities of CAT, ASPX,and MDHAR may contribute to limiting chilling tolerance at theearly stages of development in maize. Changes in levels of sugarand starch indicated a more rapid disruption of carbohydrateutilization in comparison to photosynthetic rates in the chilling-sensitiveline under short-term chilling shocks and suggested a greaterdegree of acclimation in the tolerant lines over longer periodsof chilling. Key words: Antioxidant enzymes, differential chilling sensitivity, maize, soluble carbohydrates, Zea mays     

Developmental Changes of CuZn- and Mn-Superoxide Dismutase Isozymes in Seedlings and Needles of Norway Spruce (Picea abies L.)

Changes in superoxide dismutase (SOD; EC 1.15.1.1 [EC] ) activityand isozymes were investigated in different developmental stagesof Norway spruce (Picea abies L.). Spruce seeds, seedlings grownin a climate chamber and foliar buds from field-grown treescontained two CuZn-SODs comigrating with SODs I and II previouslyidentified as the chloroplastic and cytosolic SODs in spruceneedles [Krniger et al. (1992) Plant Physiol. 100: 334]. Inaddition one Mn-SOD (SOD III) was identified by insensitivityto cyanide and H₂O₂. Highest total SOD activities were detectedin buds before bud break and in germinating seeds. In seedsand foliar buds SOD II was the major isozyme, whereas SOD Iwas dominant in mature needles. SOD III was present in all developmentalstages of the seedlings, but disappeared in field-grown treesduring bud break and reappeared at the end of summer in matureneedles. These results indicate that the activities of SODsI, II and III in Norway spruce are under independent developmentalcontrol. (Received March 1, 1993; Accepted July 16, 1993)     

Role of AKT in cyclic strain-induced endothelial cell proliferation and survival

Endothelial cells (ECs) are exposed to repetitive cyclic strain (CS) in vivo by the beating heart. The aim of this study was to assess the influence of CS amplitude and/or frequency on EC proliferation and survival and to determine the role of AKT in CS-induced EC proliferation and survival. Cultured bovine aortic ECs were exposed to 10% strain at a frequency of 60 (60 cpm-10%) or 100 (100 cpm-10%) cycles/min or 15.6% strain at a frequency of 60 cycles/min (60 cpm-15.6%). AKT, glycogen synthase kinase (GSK)-3, BAD, and cleaved caspase-3 were activated by CS in ECs. Increasing the magnitude or frequency of strain resulted in an earlier phosphorylation of GSK-3, although the magnitude of phosphorylation was similar. After CS at 60 cpm-10% for 24 h, the number of nontransfected ECs was significantly increased by 8.5% (P < 0.05). We found that the number of apoptotic ECs was slightly decreased with exposure to CS. ECs transfected with kinase-dead AKT (KA179) as well as plasmids containing a point mutation in the pleckstrin homology domain of AKT (RC25) not only prevented AKT, GSK-3, and BAD phosphorylation but also inhibited the CS-induced increase in cell number as well as the CS-induced protection against apoptosis (both P < 0.05). The ratio of 5'-bromo-2'-deoxyuridine-positive cells was increased when ECs transfected with RC25 and KA179 as well as nontransfected ECs and ECs transfected with Lipofectamine 2000 were exposed to CS. We conclude that AKT is important in enhancing the survival of ECs exposed to CS but is not involved in EC proliferation. apoptosis; glycogen synthase kinase     

甜菜夜蛾羧酸酯酶基因cDNA的克隆、表达及序列分析

羧酸酯酶是昆虫体内重要的解毒酶系之一,与昆虫抗药性产生相关。利用粉纹夜蛾Trichoplusia ni (Hübner)肠粘蛋白多克隆抗体免疫筛选甜菜夜蛾Spodoptera exigua (Hübner)中肠cDNA表达文库,得到编码羧酸酯酶的全长cDNA克隆。该cDNA克隆全长1 812 bp(GenBank登录号EF580101),开放阅读框长1 605 bp,编码535个氨基酸。该蛋白活性中心包括3个氨基酸残基（催化三联体）： Ser186, Glu319和His443, 3个N-联糖基化位点,具备羧酸酯酶的结构特征,属羧酸酯酶家族（EC: 3.1.1.-）。将该基因与pQE30载体重组,经IPTG诱导,spot-blot鉴定,蛋白获得了表达;以α-醋酸萘酯为底物,检测表达的羧酸酯酶活性为1.3 nmol/100 μL酶液。     

MYPT1 mutants demonstrate the importance of aa 888-928 for the interaction with PKGIalpha

During nitric oxide signaling, type I cGMP-dependent protein kinase (PKGI) activates myosin light chain (MLC) phosphatase through an interaction with the 130-kDa myosin targeting subunit (MYPT1), leading to dephosphorylation of 20-kDa MLC and vasodilatation. It has been suggested that the MYPT1-PKGI interaction is mediated by the COOH-terminal leucine zipper (LZ) of MYPT1 and the NH₂-terminal LZ of PKGI (HK Surks and ME Mendelsohn. Cell Signal 15: 937–944, 2003; HK Surks et al. Science 286: 1583–1587, 1999), but we previously showed that PKGI interacts with LZ-positive (LZ+) and LZ-negative (LZ–) MYPT1 isoforms (13). Interestingly, PKGI is known to preferentially bind to RR and RK motifs (WR Dostmann et al. Proc Natl Acad Sci USA 97: 14772–14777, 2000), and there is an RK motif within the aa 888–928 sequence of MYPT1 in LZ+ and LZ– isoforms. Thus, to localize the domain of MYPT1 important for the MYPT1-PKGI interaction, we designed four MYPT1 fragments that contained both the aa 888–928 sequence and the downstream LZ domain (MYPT1FL), lacked both the aa 888–928 sequence and the LZ domain (MYPT1TR), lacked only the aa 888–928 sequence (MYPT1SO), or lacked only the LZ domain (MYPT1TR2). Using coimmunoprecipitation, we found that only the fragments containing the aa 888–928 sequence (MYPT1FL and MYPT1TR2) were able to form a complex with PKGI in avian smooth muscle tissue lysates. Furthermore, mutations of the RK motif at aa 916–917 (R⁹¹⁶K⁹¹⁷) to AA decreased binding of MYPT1 to PKGI in chicken gizzard lysates; these mutations had no effect on binding in chicken aorta lysates. However, mutation of R⁹¹⁶K⁹¹⁷ to E⁹¹⁶E⁹¹⁷ eliminated binding, suggesting that one factor important for the PKGI-MYPT1 interaction is the charge at aa 916–917. These results suggest that, during cGMP-mediated signaling, aa 888–928 of MYPT1 mediate the PKGI-MYPT1 interaction. myosin light chain phosphatase; nitric oxide; smooth muscle; calcium desensitization; cGMP-dependent protein kinase; cGMP     

A Novel Neutral Protease from <Emphasis Type="Italic">Thermoactinomyces</Emphasis> Species 27a: Sequencing of the Gene,Purification, and Characterization of the Enzyme

The nucleotide sequence of the previously cloned (Zabolotskaya, M. V., Nosovskaya, E. A., Kaplun, M. A., and Akimkina, T. V. (2001). Mol. Gen. Mikrobiol. Virusol. No 1, 32–34) DNA fragment from Thermoactinomyces sp. 27a (GenBank Accession No. AY280367) containing the metalloproteinase gene was determined. A continuous open reading frame encoding a polypeptide of 673 aa was revealed. Analysis of this sequence demonstrated that the metalloproteinase from Thermoactinomyces sp. 27a is synthesized as a preproprotein and includes a leader peptide (26 aa), N-terminal propeptide (215 aa), mature region (317 aa), and additional C-terminal domain (115 aa). The recombinant enzyme from Thermoactinomyces sp. 27a was expressed in Bacillus subtilis AJ73 cells and purified by anion exchange chromatography to an electrophoretically homogeneous state. The determined N-terminal amino acid sequence of the mature protein was identical to that deduced from the gene. The obtained data suggest that the mature protein should include 432 aa and have a calculated molecular weight of 46,262 Da. However, the molecular weight of the mature protein determined by mass spectrometry was 34,190 ± 70 Da indicating a C-terminal processing. Theproteinase was not inhibited by phenylmethyl sulfonyl fluoride but was inhibited by o-phenanthroline and ethylenediaminetetraacetic acid. The enzyme had maximum activity by azocasein hydrolysis at 55°C and pH 6.5–7.5; it was stable at pH 7.5–8.5 and remained stable at 50°C for several hours. The k_cat/K_m for 3-(2-furyl)acryloyl-glycyl-L-leucine amide hydrolysis was (2.8 ± 0.1) ×10³ M^–1×s^–1.     

Purification and characterization of {delta}-aminolevulinic acid dehydratase from Chlorella regularis

-Aminolevulinic acid dehydratase (-aminolevulinic acid hydrolyaseEC 4.2.1.24 [EC] ) which catalyzes the formation ofporphobilinogenfrom two molecules of -aminolevulinic acid (ALA) was purifiedfrom Chlorella regularis 737-fold by acetone and ammonium sulfatefractionations, DEAE-cellulose column chromatography, and SephadexG-200 gel filtration. The enzyme had an optimum pH of 8.5 inTris-HCl buffer and required either Mg²⁺ or Mn²⁺ for its maximumactivity. The Km values for Mg²⁺, Mn²⁺ and ALA were 15 µM,10µM, and 0.5 mM, respectively. The enzyme was not activatedby thiol compounds, but was inhibited by p-chloromercuribenzoate.The molecular weight estimated by gel filtration was 316,000and the isoelectric point was 5.25. (Received October 18, 1978; )     

In silico characterization of a novel pathogenic deletion mutation identified in XPA gene in a Pakistani family with severe xeroderma pigmentosum

Background

Xeroderma Pigmentosum (XP) is a rare skin disorder characterized by skin hypersensitivity to sunlight and abnormal pigmentation. The aim of this study was to investigate the genetic cause of a severe XP phenotype in a consanguineous Pakistani family and in silico characterization of any identified disease-associated mutation.

Results

The XP complementation group was assigned by genotyping of family for known XP loci. Genotyping data mapped the family to complementation group A locus, involving XPA gene. Mutation analysis of the candidate XP gene by DNA sequencing revealed a novel deletion mutation (c.654del A) in exon 5 of XPA gene. The c.654del A, causes frameshift, which pre-maturely terminates protein and result into a truncated product of 222 amino acid (aa) residues instead of 273 (p.Lys218AsnfsX5). In silico tools were applied to study the likelihood of changes in structural motifs and thus interaction of mutated protein with binding partners. In silico analysis of mutant protein sequence, predicted to affect the aa residue which attains coiled coil structure. The coiled coil structure has an important role in key cellular interactions, especially with DNA damage-binding protein 2 (DDB2), which has important role in DDB-mediated nucleotide excision repair (NER) system.

Conclusions

Our findings support the fact of genetic and clinical heterogeneity in XP. The study also predicts the critical role of DDB2 binding region of XPA protein in NER pathway and opens an avenue for further research to study the functional role of the mutated protein domain.     

Senescence- and drought-related changes in peroxidase and superoxide dismutase isoforms in leaves of Ramonda serbica

Ramonda sp. (Gesneriaceae) is an endemic and relic plant ina very small group of poikilohydric angiosperms that are ableto survive in an almost completely dehydrated state. Senescence-and drought-related changes in the activity of peroxidase (POD;EC 1.11.1.7 [EC] ), ascorbate peroxidase (EC 1.11.1.11 [EC] ), and superoxidedismutase (SOD; EC 1.15.1.1 [EC] ) were determined in leaves of differentage and relative water content. The results indicate that differentPOD isoforms were stimulated during senescence and dehydration.Two of the soluble POD isoforms were anionic with pI 4.5, andtwo were cationic with pI 9.3 and 9.0. The activity of ascorbateperoxidase remained unchanged either by drought or senescence.For the first time, SOD isoforms have now been determined inthis resurrection plant. Several SOD isoforms, all of the Mntype, were found to be anionic with pI 4 and a few others hadpI from 5 to 6, while one band of FeSOD with a lower molecularweight was neutral. Rehydration brought about a remarkable decreaseover the first hour in the activity of all the antioxidant enzymesexamined but activity recovered 1 d after rehydration. The resultsconfirmed that dehydration and senescence caused disturbancein the redox homeostasis of Ramonda leaves, while inducing differentPOD isoforms. A physiological role of peroxidase reaction withhydroxycinnamic acids in conservation and protection of cellularconstituents of desiccated Ramonda leaves is suggested. Key words: Desiccation, peroxidase, Ramonda, senescence, superoxide dismutase