Non-lethal dorsal fin sampling for stable isotope analysis in seahorses

Sampling collection for stable isotope analysis has traditionally involved the sacrifice of the animal. Seahorses (Hippocampus spp.) are listed as threatened by the Convention on International Trade in Endangered Species (http://www.cites.org) and consequently lethal sampling is undesirable. We evaluated the adequacy of dorsal fin tissue of adult seahorses Hippocampus guttulatus for stable isotope analysis as an alternative to lethal tissue sampling. Three seahorse tissues (dorsal fin, muscle, and liver) were analyzed for comparisons of δ¹⁵N and δ¹³C values. Similarities found between δ¹⁵N and δ¹³C values in dorsal fin and muscle tissue of H. guttulatus suggest that both tissues are adequate for stable isotope analysis to understand feeding ecology of seahorses. However, considering the threatened status of the species, dorsal fin tissue would be recommended in adult seahorses as a non-lethal sampling. The effect of lipid extraction on carbon and nitrogen stable isotope values was also evaluated in each seahorse tissues. Significant effects of lipids extraction did only occur for δ¹³C values in muscle and liver. It was found that lipid removal was not necessary to perform SIA in dorsal fin tissues. Due to the limited availability of fin tissue obtained from fin-clipping in seahorses, the relationship between the mass/surface of dorsal fin clip and stable isotope values was analyzed. δ¹⁵N and δ¹³C values in fin samples were found to be independent of the size of fin analyzed. According to our study, the use of fin-clipping sampling, with a minimum surface analyzed of 12.74?mm², was found to be an adequate method for SIA in seahorses.     

Variation in carbon and nitrogen isotopic ratios of fin and muscle tissues of Longnose Gar (Lepisosteus osseus) and Smallmouth Buffalo (Ictiobus bubalus)

Fin clips have been proposed as a non-lethal and non-invasive alternative to dorsal muscle samples in stable isotope analysis. However, potential differences in elemental composition and turnover rates can bias inferences when different tissues are combined. Here, we tested the average difference and correlation of the isotopic signature of δ¹³C and δ¹⁵N between muscle and fin samples in two arge-bodied fishes: Longnose Gar (Lepisosteus osseus) and Smallmouth Buffalo (Ictiobus bubalus). We found that δ¹⁵N signatures of muscle and fin tissues were strongly and positively correlated for both species, although the muscle tissue for Smallmouth Buffalo was slightly more enriched in δ15N. δ¹³C signatures of both tissues were significatively different and not strongly correlated for Longnose Gar, but similar and strongly correlated for Smallmouth Buffalo. Our results suggest that fin and muscle tissue can be combined for analyses of δ¹⁵N, but correction for higher enrichment of muscle tissue may be necessary for Smallmouth Buffalo. Conversely, combining fin and muscle tissue for analysis of δ¹³C requires more caution due to their weaker correlation and dependence of species identity.     

Cytogenetic identification of genomic elements of brook trout (Salvelinus fontinalis) in the karyotype of Arctic char (Salvelinus alpinus) from the aquaculture broodstock

Growing interest of Arctic char (Salvelinus alpinus) aquaculture in Europe, and the fact that it can easily hybridize with brook trout (Salvelinus fontinalis) resulting in fertile progeny, led us to investigate fish from the farmed stocks. Chromosomes of sampled Arctic char were examined using conventional and molecular cytogenetic (FISH) techniques in order to determine possible contamination of genomic elements of brook trout. Investigated fish possessed karyotypes composed of 80–82 chromosomes and up to three chromosome fragments. Using staining methods and FISH approach enabled identification of the brook trout chromosomes in the eight out of twenty‐two examined Arctic char. Specific location of AT‐, GC‐ positive and NOR sites observed on chromosomes as well as chromosome fragments in the karyotypes of several individuals points on past chromosomal rearrangements in fish from examined broodstock. Based on our results, it may be assumed that individuals with the brook trout genomic elements, although phenotypically identified as Arctic chars, were hybrids. Our results highlights that special care should be taken to protect gene pools of brook trout and Arctic char in farms where both species are cultured.     

Growth and Dietary Niche in Salvelinus Alpinus and Salvelinus Fontinalis as Revealed by Stable Isotope Analysis

Arctic charr, Salvelinus alpinus, and brook charr, Salvelinus fontinalis, inhabiting three lakes in the de la Trinité River and adjacent watershed, north shore, Gulf of St. Lawrence, were sampled in 1998. Arctic charr growth differed among lakes with the smallest fish coming from the largest lake. Arctic charr weight–length equation exponents were almost identical at all sample sites. Brook charr growth was also similar in all lakes. July stomach samples from Arctic charr consisted almost entirely of cladocerans in the largest lake, less so in the intermediate sized lake and were mostly aquatic insects in the smallest lake. Brook charr stomach contents were more varied and included fish. Carbon, nitrogen and sulphur stable isotope analyses (SIA) were used to provide a spatially and temporally integrated image of charr diets. SIA corroborated observed among-lake differences and similarities in species diets and suggested lake morphometry may influence measured results. The ¹⁵N signature in brook charr muscle increased with fork-length, as a result of a shift towards piscivory with size. The ¹⁵N signature in Arctic charr muscle tissue showed a significant negative correlation with fork-length in two of the studied lakes that appears related to dietary niche shifts. Results demonstrate the ability of SIA to detect dietary shifts otherwise unobservable from standard gut content analysis.     

Differences in the contributions of dietary water to the hydrogen stable isotope ratios of cultured Atlantic salmon and Arctic charr tissues

Hydrogen stable isotopes of animal tissues are well established tracers of migration ecology in terrestrial ecosystems. Recent research has highlighted δ²H as a potential tool in studies of aquatic ecosystems, particularly as a robust tracer for quantifying the importance of allochthonous subsidies. Although the use of δ²H has clear potential, some uncertainties remain, in particular with regard to the contribution of dietary water to consumer δ²H. Here, we quantify the contribution of dietary water to δ²H in two salmonid fishes, Atlantic salmon (Salmo salar L.) and Arctic charr (Salvelinus alpinus L.), reared on diets of known isotopic composition. Furthermore, we examined the capacity of fins (adipose and caudal) to provide a non-lethal means of estimating consumer δ²H. The proportion of deuterium derived from environmental water of all tissue was substantial in both Atlantic salmon (mean = 0.43 ± 0.1 SD) and Arctic charr (mean = 0.48 ± 0.15 SD) but varied considerably between both individuals and tissue type. White muscle proved to be the least variable of the tissues analysed. Although fins proved to be a possible non-destructive substitute, a degree of caution is recommended with their use, as the proportion of dietary water contributing to the deuterium of fins was considerable more variable.     

Physiological, Endocrine, and Genetic Bases of Anadromy in the Brook Charr, Salvelinus Fontinalis, of the Laval River (Québec, Canada)

Brook charr, Salvelinus fontinalis, often display alternate life history styles in coastal areas. In the Laval River, some brook charr remain freshwater residents, while others undergo seasonal migrations between freshwater and saltwater environments. In the present paper, we examined physiological (electrolyte concentrations, gill Na⁺, K⁺-ATPase activity, and thyroid hormone levels) as well as genetic differences (neutral genetic markers) between anadromous and river-resident fish from the Laval River. We also examined how artificial rearing conditions affected seasonal variations in the osmoregulatory physiology of a domestic strain derived from wild anadromous fish. Sympatric anadromous and resident forms of brook charr of the Laval River exhibited differences in gill Na⁺, K⁺-ATPase activity, plasma thyroxine (T₄), and triidothyronine (T₃) concentrations. In domestic anadromous charr, rearing conditions during development had no negative impact on osmoregulatory ability or on gill Na⁺, K⁺-ATPase activity. These results argued for an important hereditary component of gill Na⁺, K⁺-ATPase activity. However, the spring increase in T₄ was present only in wild fish. Significant differences observed at microsatellite loci further suggested that at least some level of reproductive isolation may have occurred between anadromous and resident charr in the Laval River.     

Variation in stable‐isotope ratios between fin and muscle tissues can alter assessment of resource use in tropical river fishes

Carbon and nitrogen stable‐isotope ratios were compared of fin and muscle tissue from 15 fish species collected from seven headwater rivers in eastern and western Thailand. In addition, two‐source stable‐isotope mixing models were used to derive estimates of each fish's reliance on allochthonous and autochthonous energy based on fin and muscle tissues. Across the dataset, fish fin was enriched in ¹³C relative to muscle by c. 1·5‰. Variation in δ¹⁵N between tissues was below statistically significant levels. Estimates of autochthonous resource use calculated from fin tissue were on average 15% greater than those calculated from muscle. Linear mixed‐effects models indicated that inter‐tissue variation in estimates of resource use was predominantly related to inter‐tissue variation in δ¹³C. Fish fin is a credible and desirable alternative to tissues such as muscle or liver which require destructive sampling of fishes. Care must be taken, however, when estimating resource use or interpreting previous estimates of resource use derived from different tissues.     

Non-lethal sampling for stable isotope analysis of pike Esox lucius: how mucus,scale and fin tissue compare to muscle

Stable isotope analysis (SIA) was used to examine the isotopic relationships between dorsal muscle and fin, scale and epidermal mucus in pike Esox lucius. δ¹³C and δ¹⁵N varied predictably within each tissue pairing, with conversion factors calculated for the surrogate tissues, enabling their application to the non-lethal sampling of E. lucius for SIA.     

Tissue turnover and stable isotope clocks to quantify resource shifts in anadromous rainbow trout

Stable isotopes can illuminate resource usage by organisms, but effective interpretation is predicated on laboratory validation. Here we develop stable isotope clocks to track resource shifts in anadromous rainbow trout (Oncorhynchus mykiss). We used a diet-switch experiment and model fitting to quantify N stable isotope (δ¹⁵N) turnover rates and discrimination factors for seven tissues: plasma, liver, fin, mucus, red blood cells, muscle, and scales. Among tissues, diet-tissue δ¹⁵N discrimination factors ranged from 1.3 to 3.4 ‰. Model-supported tissue turnover half-lives ranged from 9.0 (fin) to 27.7 (scale) days. We evaluated six tissue turnover models using Akaike’s information criterion corrected for small sample sizes. The use of equilibrium tissue values was supported in all tissues and two-compartment models were supported in plasma, liver, and mucus. Using parameter estimates and their uncertainty we developed stable isotope clocks to estimate the time since resource shifts. Longer turnover tissues provided accurate estimates of time since resource switch for durations approximately twice their half-life. Faster turnover tissues provided even higher precision estimates, but only within their half-life post-switch. Averaging estimates of time since resource shift from multiple tissues provided the highest precision estimates of time since resource shift for the longest duration (up to 64 days). This study therefore provides insight into physiological processes that underpin stable isotope patterns, explicitly tests alternative models, and quantifies key parameters that are the foundation of field-based stable isotope analysis.     

Genetic Diversity and Hybridisation between Native and Introduced Salmonidae Fishes in a Swedish Alpine Lake

Understanding the processes underlying diversification can aid in formulating appropriate conservation management plans that help maintain the evolutionary potential of taxa, particularly under human-induced activities and climate change. Here we assessed the microsatellite genetic diversity and structure of three salmonid species, two native (Arctic charr, Salvelinus alpinus and brown trout, Salmo trutta) and one introduced (brook charr, Salvelinus fontinalis), from an alpine lake in sub-arctic Sweden, Lake Ånn. The genetic diversity of the three species was similar and sufficiently high from a conservation genetics perspective: corrected total heterozygosity, H’_T = 0.54, 0.66, 0.60 and allelic richness, A_R = 4.93, 5.53 and 5.26 for Arctic charr, brown trout and brook charr, respectively. There were indications of elevated inbreeding coefficients in brown trout (G_IS = 0.144) and brook charr (G_IS = 0.129) although sibling relationships were likely a confounding factor, as a high proportion of siblings were observed in all species within and among sampling locations. Overall genetic structure differed between species, Fst = 0.01, 0.02 and 0.04 in Arctic charr, brown trout and brook charr respectively, and there was differentiation at only a few specific locations. There was clear evidence of hybridisation between the native Arctic charr and the introduced brook charr, with 6% of individuals being hybrids, all of which were sampled in tributary streams. The ecological and evolutionary consequences of the observed hybridisation are priorities for further research and the conservation of the evolutionary potential of native salmonid species.     

Effects of Partially Anadromous Arctic Charr (Salvelinus alpinus) Populations on Ecology of Coastal Arctic Lakes

Little research has been conducted on effects of iteroparous anadromous fishes on Arctic lakes. We investigated trophic ecology, fish growth, and food web structure in six lakes located in Nunavut, Canada; three lakes contained anadromous Arctic charr (Salvelinus alpinus) whereas three lakes did not contain Arctic charr. All lakes contained forage fishes and lake trout (Salvelinus namaycush; top predator). Isotope ratios (δ¹³C, δ¹⁵N) of fishes and invertebrates did not differ between lakes with and without anadromous Arctic charr; if anadromous Arctic charr deliver marine-derived nutrients and/or organic matter to freshwater lakes, these inputs could not be detected with δ¹³C and/or δ¹⁵N. Lake trout carbon (C):nitrogen (N) and condition were significantly higher in lakes with Arctic charr (C:N = 3.42, K = 1.1) than in lakes without Arctic charr (C:N = 3.17, K = 0.99), however, and ninespine stickleback (Pungitius pungitius) condition was significantly lower in lakes with Arctic charr (K = 0.58) than in lakes without Arctic charr (K = 0.64). Isotope data indicated that pre-smolt and resident Arctic charr may be prey for lake trout and compete with ninespine stickleback. Linear distance metrics applied to isotope data showed that food webs were more compact and isotopically redundant in lakes where Arctic charr were present. Despite this, lake trout populations in lakes with Arctic charr occupied a larger isotope space and showed greater inter-individual isotope differences. Anadromous Arctic charr appear to affect ecology and feeding of sympatric freshwater species, but effects are more subtle than those seen for semelparous anadromous species.     

Isolation and cross‐familial amplification of 41 microsatellites for the brook charr (Salvelinus fontinalis)

The brook charr (Salvelinus fontinalis; Osteichthyes: Salmonidae) is a phenotypically diverse fish species inhabiting much of North America. But relatively few genetic diagnostic resources are available for this fish species. We isolated 41 microsatellites from S. fontinalis polymorphic in one or more species of salmonid fish. Thirty‐seven were polymorphic in brook charr, 15 in the congener Arctic charr (Salvelinus alpinus) and 14 in the lake charr (Salvelinus namaycush). Polymorphism was also relatively high in Oncorhynchus, where 21 loci were polymorphic in rainbow trout (Oncorhynchus mykiss) and 16 in cutthroat trout (Oncorhynchus clarkii) but only seven and four microsatellite loci were polymorphic in the more distantly related lake whitefish (Coregonus clupeaformis) and Atlantic salmon (Salmo salar), respectively. One duplicated locus (Sfo228Lav) was polymorphic at both duplicates in S. fontinalis.     

Ovarian and plasma PGE and PGF levels in naturally ovulating brook trout (Salvelinus fontinalis) and the effects of indomethacin on prostaglandin levels

Plasma and ovarian levels of PGE and PGF were measured by radioimmunoassay in naturally ovulating brook trout ($\text{Salvelinus fontinalis}$). At 12 hours post-ovulation, PGF levels in plasma and ovarian tissue were significantly elevated over levels in gravid controls. Plasma PGF levels were still elevated 5 – 7 days post-ovulation. Indomethacin treatment (10 ug/gm body weight) of ovulatory brook trout significantly decreased plasma and ovarian PGF levels by 12 hours post-ovulation. No significant differences were observed in plasma PGE levels, through gravid controls contained significantly elevated ovarian PGE levels as compared to ovulated fish.     

Development of a species-specific fractionation equation for Arctic charr (<Emphasis Type="Italic">Salvelinus alpinus</Emphasis> (L.)): an experimental approach

A species-specific fractionation equation for Arctic charr (Salvelinus alpinus (L.)) was developed experimentally for use in ecological studies of temperature-driven phenologies for the species. Juvenile Arctic charr were reared in controlled conditions at different temperatures (2–14°C), with three replicates of each temperature. Otoliths from the fish and water samples from the chambers were analysed for oxygen isotope composition and used to estimate temperature-dependent fractionation equations relating the isotopic ratio to rearing temperature. A linear and a second order polynomial relationship were estimated and validated using comparable Arctic charr data from another study. Temperatures predicted using the polynomial equation were not significantly different from recorded experimental temperatures, whereas with the linear equation there were significant differences between the predicted and measured temperatures. The polynomial equation also showed the least bias as measured by mean predictive error. Statistical comparisons of the polynomial fractionation equation to a similarly estimated equation for brook charr (Salvelinus fontinalis (Mitchill)) indicated significant differences. Results imply the need for species-specific fractionation equations, even for closely related fish. Results further suggest the polynomial form of the fractionation equation will facilitate more accurate characterisation of water temperatures suitable for use in ecological studies of temperature-driven phenologies of Arctic charr.     

Application of non‐lethal stable isotope analysis to assess feeding patterns of juvenile pallid sturgeon Scaphirhynchus albus: a comparison of tissue types and sample preservation methods

Traditional techniques for stable isotope analysis (SIA) generally require sacrificing animals to collect tissue samples; this can be problematic when studying diets of endangered species such as the pallid sturgeon Scaphirhynchus albus. Our objectives were to (i) determine if pectoral fin tissue (non‐lethal) could be a substitute for muscle tissue (lethal) in SIA of juvenile pallid sturgeon, and (ii) evaluate the influence of preservation techniques on stable isotope values. In the laboratory, individual juvenile pallid sturgeon were held for up to 186 day and fed chironomids, fish, or a commercially available pellet diet. Significant, positive relationships (r² ≥ 0.8) were observed between fin and muscle tissues for both δ¹⁵N and δ¹³C; in all samples isotopes were enriched in fins compared to muscle tissue. Chironomid and fish based diets of juvenile pallid sturgeon were distinguishable for fast growing fish (0.3 mm day^?1) using stable δ¹⁵N and δ¹³C isotopes. Frozen and preserved fin tissue δ¹⁵N isotopes were strongly related (r² = 0.89) but δ¹³C isotopes were weakly related (r² = 0.16). Therefore, freezing is recommended for preservation of fin clips to avoid the confounding effect of enrichment by ethanol. This study demonstrates the utility of a non‐lethal technique to assess time integrated food habits of juvenile pallid sturgeon and should be applicable to other threatened or endangered species.     

Aquatic food‐web dynamics following incorporation of nutrients derived from Atlantic anadromous fishes

Changes in the isotopic composition (δ¹³C and δ¹⁵N) in biofilm, macro‐invertebrates and resident salmonids were used to characterize temporal dynamics of marine derived nutrients (MDNs) incorporation between stream reaches with and without MDN inputs. Five Atlantic rivers were chosen to represent contrasting MDN subsidies: four rivers with considerable numbers of anadromous fishes; one river with little MDN input. Rainbow smelt Osmerus mordax, alewife Alosa pseudoharengus, sea lamprey Petromyzon marinus and Atlantic salmon Salmo salar, were the primary anadromous species for the sampled rivers. Regardless of the spatial resolution or the pathway of incorporation, annual nutrient pulses from spawning anadromous fishes had a positive effect on isotopic enrichment at all trophic levels (biofilm, 1·2–5·4‰; macro‐invertebrates, 0·0–6·8‰; fish, 1·2–2·6‰). Community‐wide niche space shifted toward the marine‐nutrient source, but the total ecological niche space did not always increase with MDN inputs. The time‐integrated marine‐nutrient resource contribution to the diet of S. salar parr and brook trout Salvelinus fontinalis ranged between 16·3 and 36·0% during anadromous fish‐spawning periods. The high degree of spatio‐temporal heterogeneity in marine‐nutrient subsidies from anadromous fishes lead to both direct and indirect pathways of MDN incorporation into stream food webs. This suggests that organisms at many trophic levels derive a substantial proportion of their energy from marine resources when present. The current trend of declining anadromous fish populations means fewer nutrient‐rich marine subsidies being delivered to rivers, diminishing the ability to sustain elevated riverine productivity.     

Small Tails Tell Tall Tales – Intra-Individual Variation in the Stable Isotope Values of Fish Fin

Background

Fish fin is a widely used, non-lethal sample material in studies using stable isotopes to assess the ecology of fishes. However, fish fin is composed of two distinct tissues (ray and membrane) which may have different stable isotope values and are not homogeneously distributed within a fin. As such, estimates of the stable isotope values of a fish may vary according to the section of fin sampled.

Methods

To assess the magnitude of this variation, we analysed carbon (δ ¹³C), nitrogen (δ ¹⁵N), hydrogen (δ ²H) and oxygen (δ ¹⁸O) stable isotopes of caudal fin from juvenile, riverine stages of Atlantic salmon (Salmo salar) and brown trout (Salmo trutta). Individual fins were sub-sectioned into tip, mid and base, of which a further subset were divided into ray and membrane.

Findings

Isotope variation between fin sections, evident in all four elements, was primarily related to differences between ray and membrane. Base sections were¹³C depleted relative to tip (~ 1 ‰) with equivalent variation evident between ray and membrane. A similar trend was evident in δ ²H, though the degree of variation was far greater (~ 10 ‰). Base and ray sections were ¹⁸O enriched (~ 2 ‰) relative to tip and membrane, respectively. Ray and membrane sections displayed longitudinal variation in ¹⁵N mirroring that of composite fin (~ 1 ‰), indicating that variation in¹⁵N values was likely related to ontogenetic variation.

Conclusions

To account for the effects of intra-fin variability in stable isotope analyses we suggest that researchers sampling fish fin, in increasing priority, 1) also analyse muscle (or liver) tissue from a subsample of fish to calibrate their data, or 2) standardize sampling by selecting tissue only from the extreme tip of a fin, or 3) homogenize fins prior to analysis.     

Hybridization between native white-spotted charr and nonnative brook trout in the upper Sorachi River,Hokkaido, Japan

Invasion status and impacts of nonnative brook trout (Salvelinus fontinalis) in a Hokkaido stream were investigated with field surveys and genetic analyses. Nonnative brook trout was detected in nine (41 %) of the 22 sampled reaches in three tributaries of the Sorachi River, Hokkaido, Japan. Based on the external pigmentation, twelve putative hybrids between brook trout and native white-spotted charr (Salvelinus leucomaenis) were collected in two reaches. Microsatellite and mitochondrial DNA data established that 58% of these hybrids were first-generation (F₁) progenies between male brook trout and female white-spotted charr. Our results suggest potential negative impacts of nonnative brook trout on native charr populations in Hokkaido through interspecific interactions.     

Distinguishing between juvenile anadromous and resident brook trout (Salvelinus fontinalis) using morphology

Phenotypic variation linked to habitat use has been observed in fish, both between and within species. In many river systems, migratory and resident forms of salmonids coexist, including anadromous (migrant) and resident brook trout, Salvelinus fontinalis. In such populations, juvenile anadromous (migrant) brook trout, prior to migration, inhabit regions of higher current velocity than residents. Because it is more costly to occupy fast currents than slow currents, differences in morphology minimizing the effects of drag were expected between the two forms. As predicted, migrant brook trout were found to be more streamlined (narrower and shallower bodies) than resident brook trout, and these differences persisted into the marine life of the fish. Migrants also exhibited shorter pectoral fins, which facilitate pelagic swimming, indicating that migrants, prior to their migration to the sea, possess the appropriate morphology for swimming in open water habitats. The reported differences between migrants and residents were powerful enough to derive discriminant functions, using only five of the seven measured traits, allowing for accurate classification of brook trout as either migrants or residents with an overall correct classification rate of 87%. Importantly, this study contributes to the notion that a link exists between morphology, habitat use, metabolic costs and life-history strategies. Contribution to the program of CIRSA (Centre Interuniversitaire de Recherche sur le Saumon Atlantique).     

Comparing competitive ability and associated metabolic traits between a resident and migratory population of bull trout against a non-native species

Juvenile bull trout Salvelinus confluentus from two geographically and ecologically distinct populations were compared with regard to their ability to compete with non-native brook trout Salvelinus fontinalis in an artificial stream, and with respect to their rates of oxygen consumption. Bull trout collected from a migratory population foraged more successfully against brook trout competitors than those from a resident population, capturing more of a limited amount of food items presented. The migratory population was also more aggressive (measured by the number of nips, chases and lateral threat displays) against brook trout competitors than the resident population. Bull trout from the migratory population had a higher oxygen consumption rate (203 mg O₂ kg · hr^-1) in the field than similar sized fish from the resident population (183 mg O₂ kg · hr^-1). These results suggest native bull trout have population-level variation in competitive ability against a non-native species and such competitive ability is positively associated with metabolism and migratory life history.