A biological trait approach to assess the functional composition of subtidal benthic communities in an estuarine ecosystem

Within transitional/estuarine environments ‘ecosystem functioning’ has been mostly investigated with “traditional” taxonomic analysis, based on the taxonomic composition of benthic invertebrate communities. However, ‘ecosystem functioning’ depends also greatly on the functional characteristics (biological traits) of organisms.It was a priori suggested that the biological traits of the subtidal benthic invertebrate communities within an estuarine environment would respond to the high variability of environmental pressures (natural and human induced) within this type of ecosystem.For this study, traditional taxonomic analysis (species richness, species density and Shannon–Wiener diversity) as well as biological trait analysis were used together for the first time to investigate the response of the subtidal benthic invertebrate communities to the environmental pressures within the Mondego estuary (Portugal).Biological trait analysis, in addition to traditional taxonomic analysis provided a more comprehensive understanding of the functioning within this type of ecosystem. Some of the most important outcomes are: (i) the trait “salinity preference” was the most important trait that distributed the species along the estuary, (ii) the central part of the estuary appeared to be under higher environmental stress levels than the other areas, as suggested by a dominance of some “opportunistic” traits (e.g. small short-lived species), (iii) the ratio between functional diversity (FD) and Shannon–Wiener diversity (H′) indicated lower functional redundancy at the upper reaches of the estuary. Our results, suggest that the ratio (FD/H′) might be a helpful tool to visualize this functional attribute and could potentially be applied to different communities from distinct environments. Using the traditional taxonomic analysis alone, this last functional aspect would not be detectable. Therefore, the inclusion of biological traits analysis is recommendable for estuarine ecological studies.     

Comparison study of the modern ostracod associations in the Kara and Laptev seas: Ecological aspects

Recent ostracod assemblages were investigated from coretop sediment samples collected in the eastern Kara Sea from water depths down to 300 m. A total of 45 species were identified, 27 of them were reported for the Kara Sea for the first time. The Kara Sea data were compared with our results on the distribution of ostracods in the eastern Laptev Sea. The spatial distribution of recent taxa and the ecological groupings demonstrate a clear relation to dominant environmental factors which range from estuarine to full-marine conditions. Four assemblages related to average summer bottom water salinities were established: (1) a freshwater assemblage from the inner estuaries of the Ob' and Yenisei rivers with salinities less than 2 and from thermokarst lagoons of the southern Laptev Sea coast with strong salinization in winter; (2) a brackishwater assemblage of the outer estuaries of the Ob' and Yenisei rivers with salinities up to 26; (3) a mixed euryhaline–marine assemblage dominated by euryhaline species Paracyprideis pseudopunctillata and Heterocyprideis sorbyana from the inner shelf river-affected zone of the Kara and Laptev seas, where salinities range between 26 and 32; (4) a taxonomically diverse marine assemblage dominated by shallow-water marine taxa from the northern parts of the Kara and Laptev shelves and upper continental slope with stable bottom environments and a salinity higher than 32. Abundant euryhaline species found at greater water depths are identified as part of an ice-rafted assemblage. They are possibly entrained into the newly formed fast ice during autumn storms and freeze-up period and then transported to the distal open-sea areas during summer.     

Spatial pattern of native species Myriophyllum spicatum and invasive alien species Elodea nuttallii after introduction of the latter one into the Drava River (Slovenia)

Invasive alien species Elodea nuttallii was introduced into the Drava River (Slovenia) in 2007. The spatial distribution of native macrophyte species Myriophyllum spicatum and the invasive alien species E. nuttallii was studied in two impoundments, HPP Vuhred and HPP Mariborski otok in the years 2009, 2010 and 2011. The very heterogeneous environment of the Drava River had resulted in dynamic and non-uniform distributions of E. nuttalli and M. spicatum in both impoundments. The distribution of E. nuttalli was shown to be suppressed in river stretches exposed to great turbulence. It had, however, successfully invaded areas with gentle slope of littoral, low exposition to main water flow and muddy sediment and prevailed against the native species M. spicatum. The latter was more abundant than E. nuttallii in stretches exposed to higher flow velocity. Thus, the competitive success of M. spicatum and E. nuttallii depended on environmental conditions. Our results lead to the prediction that E. nuttallii will increase further in the river Drava, causing serious economic problems.     

基于生态通道模型的长江口水域生态系统结构与能量流动分析

利用Ecopath with Ecosim在前期研究的基础上构建了3个时期(2000年秋、2006年秋、2012年秋)长江口水域生态系统的生态通道模型,分析对比了三峡工程蓄水前中后期,长江口水域生态系统结构与能量流动特征。模型将长江口水域生态系统划分为鱼类、虾类、蟹类、头足类、底栖动物、浮游动物、浮游植物、碎屑等17个功能组,基本覆盖了长江口生态系统能量流动的主要途径。模型结果分析表明:蓄水前中后期,长江口水域生态系统各功能组营养级组成和分布相近,但由于长江口渔业过度捕捞,蓄水中后期多数功能组的生态营养转换率被动提高。长江口渔获物的组成未发生明显变化,但渔获物的平均营养级降低,渔获量减少。蓄水中后期,生态系统中牧食食物链的重要性增加,碎屑食物链的重要性降低,这与蓄水之后长江入海径流改变、泥沙量减少、陆源污染增加关系密切。结果表明,蓄水前中后期,生态系统均处于不成熟阶段,蓄水后生态系统总生物量、初级生产量及流向碎屑的能量呈降低趋势,但系统的净效率和再循环率升高。     

Spatio-temporal effects of selected physico-chemical variables of water, algae and sediment chemistry on the larval community of nuisance Chironomidae (Diptera) in a natural and a man-made lake in central Florida

Spatio-temporal distributions of Chironomus crassicaudatus, Chironomus decorus, Glyptotendipes paripes, Cryptochironomus fulvus and Tanypodinae midge larvae and selected associated environmental variables (physico-chemical variables of water, sediment chemistry and algal composition) were studied for one year in natural Lake Monroe and man-made Konomac Lake in central Florida. Ordination analysis (CCA with variation partitioning) showed that in each lake, sediment variables were the most important environmental variables. However, the most important proportion of species variability in pooled data from both lakes was explained by lake-specific combinations of water, sediment and algal variables. Chironomid larvae were ordinated with increasing depth as follows: G. paripes, C. fulvus, C. crassicaudatus, Tanypodinae, and C. decorus. This trend was similar for both lakes individually as well as for the pooled data. As water depth increased, organic matter content and associated metals concentrations in sediment increased. Glyptotendipes paripes displayed significant, negative correlation with water depth and sediment total carbon content, while C. decorus showed a significant positive correlation with these variables; C. crassicaudatus did not show any significant correlation with either of these variables. The algal composition in the pooled data from both lakes was another important factor affecting the larval distributions. The proportion of G. paripes and C. decorus larvae increased with filamentous algal density, and C. crassicaudatus larvae with increasing Cyanobacteria. Although both study lakes were very shallow, the effect of water depth (alone or shared with environmental variables) on chironomid larval community composition was substantially higher than the seasonality (sampling month) effect.     

A model study for an Oceania watershed: spatio-temporal changes of mesozooplankton in riverine and estuarine parts of the Lanyang River in Taiwan

The mesozooplankton of a river tributary in Oceania is evaluated and is correlated against environmental, abiotic, and biological attributes of this lotic system. Abundance, distribution, and the diversity of mesozooplankton was studied at nine stations including one estuarine station during ten sampling campaigns from June 2004 to December 2005 along the Lanyang River, the largest river and estuarine ecosystem in northeastern Taiwan. Mesozooplankton was dominated by copepods, cladocerans, and fish larvae. Among all samples, the highest abundances of mesozooplankton (5,049.36 individuals m^?3) occurred in the estuary station in August 2004, which also corresponds to the highest salinities (37.0), indicating the marine role in shaping the estuarine planktonic assemblages. The abundance of mesozooplankton and number of mesozooplankton taxa were significantly higher in samples of the estuarine station than in the riverine stations (p < 0.05, one-way ANOVA). The number of mesozooplankton taxa number was affected by water temperature (r = 0.697; p = 0.025, Pearson’s correlation) that was primarily influenced by the weather that was in turn affected by seasonal monsoons.     

空间和环境因子对黄河口自然和淡水恢复湿地底栖动物群落的差异影响

生物多样性的形成和维持机制是生态学研究的核心问题,其中环境和空间因子在群落构建中的相对重要性是生态学家面临的重要挑战。为探究黄河口湿地底栖动物群落的关键影响因子,及环境和空间因子对底栖动物群落结构的相对调控作用。于2017年10月与2018年5月对黄河口湿地32个样点（淡水恢复湿地19个和自然湿地13个）的底栖动物和水体理化指标进行采集分析。非度量多维标度排序（NMDS）结果显示,黄河口淡水恢复湿地和自然湿地的底栖动物群落结构显著不同。典范对应分析（CCA）表明,影响淡水恢复湿地底栖动物群落结构的环境因子主要为电导率、盐度和氧化还原电位;而自然湿地底栖动物群落结构主要受pH和无机碳的影响;盐度是两类湿地底栖动物群落组成差异的关键因子。变差分解（VPA）结果显示,环境过滤对淡水恢复湿地底栖动物群落起主导作用;在自然湿地中,空间因子对底栖动物群落具有主要的调控作用,同时环境和空间因子的相互作用也至关重要。本研究明确了黄河口的自然和恢复湿地中环境和空间因素对底栖动物群落特征的相对作用,对黄河三角洲河口湿地中生物多样性的保护和生态系统管理提供参考。     

Rehabilitation of impounded estuarine wetlands by hydrologic reconnection to the Indian River Lagoon,Florida (USA)

Salt marshes of the Indian River Lagoon, Florida (USA) were once prolific producers of mosquitoes. Mosquitoes lay their eggs on the infrequently-flooded high marsh surface when the soil surface is exposed. The eggs hatch when the high marsh is flooded by the infrequent high tides or summer rains. To control mosquito production, most of the salt marshes (over 16.200 ha) were impounded by the early 1970s. Flooding, usually by pumping water from the Lagoon, effectively controlled mosquitoes. However, impounding had a profoundly negative impact on the wetland plant, fish, and invertebrate communities. Isolation from the Lagoon cut off aquatic access by transient estuarine species that used the wetlands for feeding or as nursery area. In one study, the number of fish species dropped from 16 to 5 after impounding. Wetland vegetation within some impoundments was totally eliminated; other impoundments developed into freshwater systems. When tidal exchange is restored through hydrologic connection, usually by culverts installed through the perimeter dike, recovery to more natural conditions is often rapid. In one impoundment where wetland vegetation was totally eliminated, recovery of salt-tolerant plants began almost immediately. In another, cover of salt-tolerant plants increased 1,056% in less than 3 years. Fisheries species that benefitted the most were snook, ladyfish, and striped mullet. Over 1,500 juvenile snook were captured in a single 3-hr flood-tide culvert trap as they attempted to migrate into an impoundment. The zooplankton community rapidly returned to the more typical marsh-Lagoon community. Water quality and sediment sulfides returned to typical marsh values. Overall, reconnection enhances natural productivity and diversity, although water quality in the perimeter ditch, an artifact of dike construction, remains problematic. Earlier experiments demonstrated that flooding only during the summer mosquito breeding season provided as effective mosquito control as year-round flooding. In standard management, the impoundment is flooded in summer, then left open to the Lagoon through culverts the rest of the year. Culverts are typically opened when the fall sea level rise first floods the high marsh. Impoundment reconnection is being implemented by a multi-agency partnership. The total reconnected area is expected to reach 9,454 ha by the end of 1998, representing 60% of the impounded wetlands in the entire IRL system. One stumbling block is private ownership of many of the remaining isolated impoundments.     

Determination of Key Environmental Factors Responsible for Distribution Patterns of Fiddler Crabs in a Tropical Mangrove Ecosystem

In tropical regions, different species of fiddler crabs coexist on the mangrove floor, which sometimes makes it difficult to define species-specific habitat by visual inspection. The aim of this study is to find key environmental parameters which affect the distribution of fiddler crabs and to determine the habitats in which each species was most abundant. Crabs were collected from 19 sites within the mudflats of Sepang-Lukut mangrove forest. Temperature, porewater salinity, organic matter, water content, carbon and nitrogen content, porosity, chlorophyll content, pH, redox potential, sediment texture and heavy metals were determined in each 1 m² quadrate. Pearson correlation indicated that all sediment properties except pH and redox potential were correlated with sediment grain size. Canonical correspondence analysis (CCA) indicated that Uca paradussumieri was negatively correlated with salinity and redox potential. Sand dwelling species, Uca perplexa and Uca annulipes, were highly dependent on the abundance of 250 μm and 150 μm grain size particles in the sediment. Canonical Discriminative Analysis (CDA) indicated that variation in sediment grain size best explained where each crab species was most abundant. Moreover, U. paradussumieri commonly occupies muddy substrates of low shore, while U. forcipata lives under the shade of mangrove trees. U. annulipes and U. perplexa with the high number of spoon tipped setae on their second maxiliped are specialized to feed on the sandy sediments. U. rosea and U. triangularis are more common on muddy sediment with high sediment density. In conclusion, sediment grain size that influences most sediment properties acts as a main factor responsible for sediment heterogeneity. In this paper, the correlation between fiddler crab species and environmental parameters, as well as the interaction between sediment characteristics, was explained in order to define the important environmental factors in fiddler crab distributions.     

The effects of temperature and salinity on ventilation behavior of two species of ghost shrimp (Thalassinidea) from the northern Gulf of Mexico: a laboratory study

Thalassinidean shrimp are among the most important bioturbators in coastal ecosystems. The species Lepidophthalmus louisianensis and Callichirus islagrande are found in dense aggregations (up to 400 burrows m⁻²) along sandy and muddy shores of the northern Gulf of Mexico. These shrimp actively ventilate their burrows to provide oxygen and eliminate wastes. In doing so, they expel nutrient-rich burrow water to the overlying water column, potentially altering nutrient cycling and benthic primary productivity. To develop a mechanistic understanding of the role of burrowing shrimp in nutrient processes, we must first examine how changes in environmental conditions alter the frequency, strength, and duration of ventilation. Field measurements of burrow temperature and salinity suggest that the burrow serves as a buffer from the highly variable conditions found in these estuarine, intertidal habitats. Temperatures at sediment depths >30 cm were generally warmer in winter and cooler in summer than at the sediment surface. Burrow salinities, measured at low tide, were consistently higher than adjacent open water. We used these measurements to parameterize laboratory studies of burrow ventilation in artificial burrows made of plastic tubing and in more natural sediment mesocosms, and studies of oxygen consumption in small glass containers. Rates of oxygen consumption and burrow ventilation by L. louisianensis were lower than those of C. islagrande, perhaps reflecting a lower overall activity rate in the former species which resides in less permeable sediments. Generally, increased temperature had a significant positive effect on oxygen consumption for both species. Salinity had no effect on oxygen consumption by L. louisianensis, reflecting the ability of this species to exist in a wide range of salinities. In contrast, oxygen consumption rates of C. islagrande, which is less tolerant of low salinity, were significantly higher at 35‰ than at 20‰. Ventilation rates were highly variable, and shrimp in artificial burrows tended to have consistently higher ventilation rates than those in sediment mesocosms. There is a trend toward more frequent ventilation at 30 °C for both species. Salinity had no effect on ventilation for either species. Our results suggest that thalassinideans exhibit highly variable and species-specific ventilation patterns that are more likely to be affected by temperature than salinity. Increased ventilation at higher temperatures seems to coincide with increased oxygen consumption at these temperatures, although a similar finding was not made for salinity treatments.     

Consequences of Increasing Hypoxic Disturbance on Benthic Communities and Ecosystem Functioning

Disturbance-mediated species loss has prompted research considering how ecosystem functions are changed when biota is impaired. However, there is still limited empirical evidence from natural environments evaluating the direct and indirect (i.e. via biota) effects of disturbance on ecosystem functioning. Oxygen deficiency is a widespread threat to coastal and estuarine communities. While the negative impacts of hypoxia on benthic communities are well known, few studies have assessed in situ how benthic communities subjected to different degrees of hypoxic stress alter their contribution to ecosystem functioning. We studied changes in sediment ecosystem function (i.e. oxygen and nutrient fluxes across the sediment water-interface) by artificially inducing hypoxia of different durations (0, 3, 7 and 48 days) in a subtidal sandy habitat. Benthic chamber incubations were used for measuring responses in sediment oxygen and nutrient fluxes. Changes in benthic species richness, structure and traits were quantified, while stress-induced behavioral changes were documented by observing bivalve reburial rates. The initial change in faunal behavior was followed by non-linear degradation in benthic parameters (abundance, biomass, bioturbation potential), gradually impairing the structural and functional composition of the benthic community. In terms of ecosystem function, the increasing duration of hypoxia altered sediment oxygen consumption and enhanced sediment effluxes of NH₄ ⁺ and dissolved Si. Although effluxes of PO₄ ³⁻ were not altered significantly, changes were observed in sediment PO₄ ³⁻ sorption capability. The duration of hypoxia (i.e. number of days of stress) explained a minor part of the changes in ecosystem function. Instead, the benthic community and disturbance-driven changes within the benthos explained a larger proportion of the variability in sediment oxygen- and nutrient fluxes. Our results emphasize that the level of stress to the benthic habitat matters, and that the link between biodiversity and ecosystem function is likely to be affected by a range of factors in complex, natural environments.     

Rehabilitation of impounded estuarine wetlands by hydrologic reconnection to the Indian River Lagoon, Florida (USA)

Salt marshes of the Indian River Lagoon, Florida (USA) were once prolific producers of mosquitoes. Mosquitoes lay their eggs on the infrequently-flooded high marsh surface when the soil surface is exposed. The eggs hatch when the high marsh is flooded by the infrequent high tides or summer rains. To control mosquito production, most of the salt marshes (over 16.200 ha) were impounded by the early 1970s. Flooding, usually by pumping water from the Lagoon, effectively controlled mosquitoes.However, impounding had a profoundly negative impact on the wetland plant, fish, and invertebrate communities. Isolation from the Lagoon cut off aquatic access by transient estuarine species that used the wetlands for feeding or as nursery area. In one study, the number of fish species dropped from 16 to 5 after impounding. Wetland vegetation within some impoundments was totally eliminated; other impoundments developed into freshwater systems.When tidal exchange is restored through hydrologic connection, usually by culverts installed through the perimeter dike, recovery to more natural conditions is often rapid. In one impoundment where wetland vegetation was totally eliminated, recovery of salt-tolerant plants began almost immediately. In another, cover of salt-tolerant plants increased 1,056% in less than 3 years. Fisheries species that benefitted the most were snook, ladyfish, and striped mullet. Over 1,500 juvenile snook were captured in a single 3-hr flood-tide culvert trap as they attempted to migrate into an impoundment. The zooplankton community rapidly returned to the more typical marsh-Lagoon community. Water quality and sediment sulfides returned to typical marsh values. Overall, reconnection enhances natural productivity and diversity, although water quality in the perimeter ditch, an artifact of dike construction, remains problematic.Earlier experiments demonstrated that flooding only during the summer mosquito breeding season provided as effective mosquito control as year-round flooding. In standard management, the impoundment is flooded in summer, then left open to the Lagoon through culverts the rest of the year. Culverts are typically opened when the fall sea level rise first floods the high marsh.Impoundment reconnection is being implemented by a multi-agency partnership. The total reconnected area is expected to reach 9,454 ha by the end of 1998, representing 60% of the impounded wetlands in the entire IRL system. One stumbling block is private ownership of many of the remaining isolated impoundments.University of Florida, IFAS, Journal Series No. R-05201.Harbor Branch Contribution Number 1152.Corresponding editor: R.E. Turner     

Influence of macrofaunal assemblages and environmental heterogeneity on microphytobenthic production in experimental systems

Despite the complexity of natural systems, heterogeneity caused by the fragmentation of habitats has seldom been considered when investigating ecosystem processes. Empirical approaches that have included the influence of heterogeneity tend to be biased towards terrestrial habitats; yet marine systems offer opportunities by virtue of their relative ease of manipulation, rapid response times and the well-understood effects of macrofauna on sediment processes. Here, the influence of heterogeneity on microphytobenthic production in synthetic estuarine assemblages is examined. Heterogeneity was created by enriching patches of sediment with detrital algae (Enteromorpha intestinalis) to provide a source of allochthonous organic matter. A gradient of species density for four numerically dominant intertidal macrofauna (Hediste diversicolor, Hydrobia ulvae, Corophium volutator, Macoma balthica) was constructed, and microphytobenthic biomass at the sediment surface was measured. Statistical analysis using generalized least squares regression indicated that heterogeneity within our system was a significant driving factor that interacted with macrofaunal density and species identity. Microphytobenthic biomass was highest in enriched patches, suggesting that nutrients were obtained locally from the sediment-water interface and not from the water column. Our findings demonstrate that organic enrichment can cause the development of heterogeneity which influences infaunal bioturbation and consequent nutrient generation, a driver of microphytobenthic production.     

Spatial variability of benthic-pelagic coupling in an estuary ecosystem: consequences for microphytobenthos resuspension phenomenon

The high degree of physical factors in intertidal estuarine ecosystem increases material processing between benthic and pelagic compartments. In these ecosystems, microphytobenthos resuspension is a major phenomenon since its contribution to higher trophic levels can be highly significant. Understanding the sediment and associated microphytobenthos resuspension and its fate in the water column is indispensable for measuring the food available to benthic and pelagic food webs. To identify and hierarchize the physical/biological factors potentially involved in MPB resuspension, the entire intertidal area and surrounding water column of an estuarine ecosystem, the Bay des Veys, was sampled during ebb tide. A wide range of physical parameters (hydrodynamic regime, grain size of the sediment, and suspended matter) and biological parameters (flora and fauna assemblages, chlorophyll) were analyzed to characterize benthic-pelagic coupling at the bay scale. Samples were collected in two contrasted periods, spring and late summer, to assess the impact of forcing variables on benthic-pelagic coupling. A mapping approach using kriging interpolation enabled us to overlay benthic and pelagic maps of physical and biological variables, for both hydrological conditions and trophic indicators. Pelagic Chl a concentration was the best predictor explaining the suspension-feeders spatial distribution. Our results also suggest a perennial spatio-temporal structure of both benthic and pelagic compartments in the ecosystem, at least when the system is not imposed to intense wind, with MPB distribution controlled by both grain size and bathymetry. The benthic component appeared to control the pelagic one via resuspension phenomena at the scale of the bay. Co-inertia analysis showed closer benthic-pelagic coupling between the variables in spring. The higher MPB biomass observed in summer suggests a higher contribution to filter-feeders diets, indicating a higher resuspension effect in summer than in spring, in turn suggesting an important role of macrofauna bioturbation and filter feeding (Cerastoderma edule).     

Seasonal Variation in Shell Calcification of Planktonic Foraminifera in the NE Atlantic Reveals Species-Specific Response to Temperature,Productivity, and Optimum Growth Conditions

Using shells collected from a sediment trap series in the Madeira Basin, we investigate the effects of seasonal variation of temperature, productivity, and optimum growth conditions on calcification in three species of planktonic Foraminifera. The series covers an entire seasonal cycle and reflects conditions at the edge of the distribution of the studied species, manifesting more suitable growth conditions during different parts of the year. The seasonal variation in seawater carbonate saturation at the studied site is negligible compared to other oceanic regions, allowing us to assess the effect of parameters other than carbonate saturation. Shell calcification is quantified using weight and size of individual shells. The size–weight scaling within each species is robust against changes in environmental parameters, but differs among species. An analysis of the variation in calcification intensity (size-normalized weight) reveals species-specific response patterns. In Globigerinoides ruber (white) and Globigerinoides elongatus, calcification intensity is correlated with temperature (positive) and productivity (negative), whilst in Globigerina bulloides no environmental forcing is observed. The size–weight scaling, calcification intensity, and response of calcification intensity to environmental change differed between G. ruber (white) and G. elongatus, implying that patterns extracted from pooled analyses of these species may reflect their changing proportions in the samples. Using shell flux as a measure of optimum growth conditions, we observe significant positive correlation with calcification intensity in G. elongatus, but negative correlation in G. bulloides. The lack of a consistent response of calcification intensity to optimum growth conditions is mirrored by the results of shell size analyses. We conclude that calcification intensity in planktonic Foraminifera is affected by factors other than carbonate saturation. These factors include temperature, productivity, and optimum growth conditions, but the strength and sign of the relationships differ among species, potentially complicating interpretations of calcification data from the fossil record.     

A comparison of impoundments and natural drainage lakes in the Northeast USA*

We classified 235 randomly selected lentic waterbodies (>1 ha) in the Northeast USA as human created, or natural. We compared geographic extent and distribution, morphology and hydrology, trophic state, and fish assemblage metrics of impoundments and natural drainage lakes. We estimated that 46% of the 10 608 (±1695; 95% CI) lentic waterbodies in the region were impoundments or quarries; 68% of Uplands lakes and 26% of Lowlands lakes were natural. Impoundments were smaller, shallower, had shorter water residence times, and were in watersheds with greater human activity than were natural drainage lakes. More than half (55%) of Lowlands impoundments were eutrophic, accounting for 67% of eutrophic or hypereutrophic lentic waterbodies in the Northeast. An estimated 90% of eutrophic lakes and impoundments were <23 ha. Impoundments had greater proportions of fish species and individuals tolerant of human disturbance, and greater proportions of non-native species and individuals than did natural drainage lakes. We discuss some management implications of the differences between impoundments and natural drainage lakes.     

Does National Wetland Inventory class consistently identify vegetation and edaphic differences in Oregon tidal wetlands?

Accurately mapping, modeling, and managing the diversity of wetlands present in estuaries often relies on habitat classification systems that consistently identify differences in biotic structure or other ecosystem characteristics between classes. We used field data from four Oregon estuaries to test for differences in vegetation structure and edaphic characteristics among three tidal emergent marsh classes derived from National Wetlands Inventory (NWI) data: low estuarine marsh, high estuarine marsh, and tidal palustrine marsh. Independently of NWI class, we also evaluated the number and types of plant assemblages present and how edaphic variables, non-native plant cover, and plant species richness varied among them. Pore water salinity varied most strongly across marsh classes, with sediment carbon and nitrogen content, grain size and marsh surface elevation showing smaller differences. Cover of common vascular plant species differed between marsh classes and overall vegetation composition was somewhat distinct among marsh types. High estuarine marsh had the largest species pools. However, plot-level plant diversity was similar among marsh classes. Non-native species cover was highest in tidal palustrine and high estuarine marshes. The marshes in the study contained a large number of plant assemblages with most occurring across more than one marsh class. The more common assemblages occurred along a continuum of tidal elevation, soil salinity, and edaphic characteristics, with varying plant richness and non-native cover. Our data suggest that NWI classes are useful for differentiating several general features of Oregon tidal marsh structure, but that more detailed information on plant assemblages found within those wetland classes would allow more precise characterization of additional wetland features such as edaphic conditions and plant diversity.     

Environmental Drivers of Benthic Flux Variation and Ecosystem Functioning in Salish Sea and Northeast Pacific Sediments

The upwelling of deep waters from the oxygen minimum zone in the Northeast Pacific from the continental slope to the shelf and into the Salish Sea during spring and summer offers a unique opportunity to study ecosystem functioning in the form of benthic fluxes along natural gradients. Using the ROV ROPOS we collected sediment cores from 10 sites in May and July 2011, and September 2013 to perform shipboard incubations and flux measurements. Specifically, we measured benthic fluxes of oxygen and nutrients to evaluate potential environmental drivers of benthic flux variation and ecosystem functioning along natural gradients of temperature and bottom water dissolved oxygen concentrations. The range of temperature and dissolved oxygen encountered across our study sites allowed us to apply a suite of multivariate analyses rarely used in flux studies to identify bottom water temperature as the primary environmental driver of benthic flux variation and organic matter remineralization. Redundancy analysis revealed that bottom water characteristics (temperature and dissolved oxygen), quality of organic matter (chl a:phaeo and C:N ratios) and sediment characteristics (mean grain size and porosity) explained 51.5% of benthic flux variation. Multivariate analyses identified significant spatial and temporal variation in benthic fluxes, demonstrating key differences between the Northeast Pacific and Salish Sea. Moreover, Northeast Pacific slope fluxes were generally lower than shelf fluxes. Spatial and temporal variation in benthic fluxes in the Salish Sea were driven primarily by differences in temperature and quality of organic matter on the seafloor following phytoplankton blooms. These results demonstrate the utility of multivariate approaches in differentiating among potential drivers of seafloor ecosystem functioning, and indicate that current and future predictive models of organic matter remineralization and ecosystem functioning of soft-muddy shelf and slope seafloor habitats should consider bottom water temperature variation. Bottom temperature has important implications for estimates of seasonal and spatial benthic flux variation, benthic–pelagic coupling, and impacts of predicted ocean warming at high latitudes.     

Evaluation of extraction methods for use with NMR-based metabolomics in the marine polychaete ragworm, Hediste diversicolor

The sediment-dwelling polychaete, Hediste diversicolor, is commonly found in Northern temperate estuaries. Its limited mobility and tolerance to polluted conditions makes it a good candidate for biological monitoring. Moreover, its importance in the functioning of the sediment ecosystem has caused it to be described as a keystone species. Here we present the development of analytical methodology that will enable the use of H. diversicolor in environmental metabolomics studies for the biomonitoring of estuarine ecosystems. Polar and non-polar extraction solvents have been used to solubilise a wide range of metabolites. Extraction solvents assessed include: aqueous phosphate buffer solution, methanol:chloroform:water (1:1:0.9), methanol:water (1:1 and 2:1) and chloroform. The metabolites were analysed using 1-dimensional (1D) ¹H nuclear magnetic resonance (NMR) spectroscopy. Using the methanol:water (1:1) method, previous freezing to aid cell rupture did not result in an enhanced extraction. Removal of methanol with a speed vacuum resulted in reduction in yield. Methanol:water (1:1) and chloroform extractions proved to be the most appropriate techniques based on the sample yield and repeatability. NMR-based metabolomics in the ragworm can now be used to understand the ecophysiology of this important estuarine organism and has applications in biomonitoring, biomarker development and ecotoxicological studies.