Coordinated and Cohesive Movement of Two Small Conspecific Fish Induced by Eliciting a Simultaneous Optomotor Response

Background

In animal groups such as herds, schools, and flocks, a certain distance is maintained between adjacent individuals, allowing them to move as a cohesive unit. Proximate causations of the cohesive and coordinated movement under dynamic conditions, however, have been poorly understood.

Methodology/Principal Findings

We established a novel and simple behavioral assay using pairs of small fish (medaka and dwarf pufferfish) by eliciting a simultaneous optomotor response (OMR). We demonstrated that two homospecific fish began to move cohesively and maintained a distance of 2 to 4 cm between them when an OMR was elicited simultaneously in the fish. The coordinated and cohesive movement was not exhibited under a static condition. During the cohesive movement, the relative position of the two fish was not stable. Furthermore, adult medaka exhibited the cohesive movement but larvae did not, despite the fact that an OMR could be elicited in larvae, indicating that this ability to coordinate movement develops during maturation. The cohesive movement was detected in homospecific pairs irrespective of body-color, sex, or albino mutation, but was not detected between heterospecific pairs, suggesting that coordinated movement is based on a conspecific interaction.

Conclusions/Significance

Our findings demonstrate that coordinated behavior between a pair of animals was elicited by a simultaneous OMR in two small fish. This is the first report to demonstrate induction of a schooling-like movement in a pair of fish by an OMR and to investigate the effect of age, sex, body color, and species on coordination between animals under a dynamic condition.     

Integrated Analyses Resolve Conflicts over Squamate Reptile Phylogeny and Reveal Unexpected Placements for Fossil Taxa

Squamate reptiles (lizards and snakes) are a pivotal group whose relationships have become increasingly controversial. Squamates include >9000 species, making them the second largest group of terrestrial vertebrates. They are important medicinally and as model systems for ecological and evolutionary research. However, studies of squamate biology are hindered by uncertainty over their relationships, and some consider squamate phylogeny unresolved, given recent conflicts between molecular and morphological results. To resolve these conflicts, we expand existing morphological and molecular datasets for squamates (691 morphological characters and 46 genes, for 161 living and 49 fossil taxa, including a new set of 81 morphological characters and adding two genes from published studies) and perform integrated analyses. Our results resolve higher-level relationships as indicated by molecular analyses, and reveal hidden morphological support for the molecular hypothesis (but not vice-versa). Furthermore, we find that integrating molecular, morphological, and paleontological data leads to surprising placements for two major fossil clades (Mosasauria and Polyglyphanodontia). These results further demonstrate the importance of combining fossil and molecular information, and the potential problems of estimating the placement of fossil taxa from morphological data alone. Thus, our results caution against estimating fossil relationships without considering relevant molecular data, and against placing fossils into molecular trees (e.g. for dating analyses) without considering the possible impact of molecular data on their placement.     

Patterns of Fish Movement on Eastern Tasmanian Rocky Reefs

We assessed small-scale movement patterns of fishes on three eastern Tasmanian reefs by divers visually resighting 1040 individuals of 16 species marked with unique colour-coded tags. With the possible exception of the monacanthid Acanthaluteres vittiger, common species showed high fidelity to site, with individuals generally resighted <100m from the initial tagging site and remaining near the tagging site throughout the 1 year duration of study. The wrasses Pictilabrus laticlavius and Notolabrus tetricus were more sedentary than Notolabrus fucicola and the monacanthids Meuschenia australis and Meuschenia freycineti. Body length, sex, water temperature and time since tagging had little influence on distance moved compared to variation between individuals, other than movement distance increasing with body length for N. tetricus. Movement patterns were generally consistent at all three sites, although mean distance moved by N. fucicola was double at Swanport and Return Point compared to Lobster Point. N. tetricus but not P. laticlavius emigrated from areas artificially cleared of macroalgae. The sedentary nature of most small- to medium-sized reef fish species, particularly labrids, indicates that relatively small (1km diameter) marine protected areas should generally provide conservation benefits for these fishes but few `spillover' benefits in surrounding areas.     

The Gut Microbial Community of Midas Cichlid Fish in Repeatedly Evolved Limnetic-Benthic Species Pairs

Gut bacterial communities are now known to influence a range of fitness related aspects of organisms. But how different the microbial community is in closely related species, and if these differences can be interpreted as adaptive is still unclear. In this study we compared microbial communities in two sets of closely related sympatric crater lake cichlid fish species pairs that show similar adaptations along the limnetic-benthic axis. The gut microbial community composition differs in the species pair inhabiting the older of two crater lakes. One major difference, relative to other fish, is that in these cichlids that live in hypersaline crater lakes, the microbial community is largely made up of Oceanospirillales (52.28%) which are halotolerant or halophilic bacteria. This analysis opens up further avenues to identify candidate symbiotic or co-evolved bacteria playing a role in adaptation to similar diets and life-styles or even have a role in speciation. Future functional and phylosymbiotic analyses might help to address these issues.     

Coordinated Movement of Cytoplasmic and Transmembrane Domains of RyR1 upon Gating

Ryanodine receptor type 1 (RyR1) produces spatially and temporally defined Ca²⁺ signals in several cell types. How signals received in the cytoplasmic domain are transmitted to the ion gate and how the channel gates are unknown. We used EGTA or neuroactive PCB 95 to stabilize the full closed or open states of RyR1. Single-channel measurements in the presence of FKBP12 indicate that PCB 95 inverts the thermodynamic stability of RyR1 and locks it in a long-lived open state whose unitary current is indistinguishable from the native open state. We analyzed two datasets of 15,625 and 18,527 frozen-hydrated RyR1-FKBP12 particles in the closed and open conformations, respectively, by cryo-electron microscopy. Their corresponding three-dimensional structures at 10.2 Å resolution refine the structure surrounding the ion pathway previously identified in the closed conformation: two right-handed bundles emerging from the putative ion gate (the cytoplasmic “inner branches” and the transmembrane “inner helices”). Furthermore, six of the identifiable transmembrane segments of RyR1 have similar organization to those of the mammalian Kv1.2 potassium channel. Upon gating, the distal cytoplasmic domains move towards the transmembrane domain while the central cytoplasmic domains move away from it, and also away from the 4-fold axis. Along the ion pathway, precise relocation of the inner helices and inner branches results in an approximately 4 Å diameter increase of the ion gate. Whereas the inner helices of the K⁺ channels and of the RyR1 channel cross-correlate best with their corresponding open/closed states, the cytoplasmic inner branches, which are not observed in the K⁺ channels, appear to have at least as important a role as the inner helices for RyR1 gating. We propose a theoretical model whereby the inner helices, the inner branches, and the h1 densities together create an efficient novel gating mechanism for channel opening by relaxing two right-handed bundle structures along a common 4-fold axis.     

高黎贡山鱼类区系和板块位移的生物效应

本文探讨高黎贡山地区(掸邦-马来亚板块)向北移动并右旋的地史过程,及其造成的环境变迁,研究这地过程对高黎贡山地区系产生的生物效应。板块位移的生物效应表现为使高黎贡山境内的伊洛瓦底江水系和怒江水系成为(1)古北界和东洋界鱼类区系的交汇融合带;(2)北纬26°左右地带的水体为热带亚洲鱼类和西藏高原鱼类交流的界鱼石,南、北成分互不往来;(3)鱼类繁衍后代的天堂,特有成分占本地区鱼类总数的53%;(4)高黎贡山鱼类区系多源,来源于热带也来源于古北界的温带。本文认为     

The Effect of Temperature on the Light-Induced Pigment Movement in Fish Corneal Chromatophores

Corneal chromatophores of unusual morphology were used for studies on the influence of temperature on the intracellular pigment movement in two species of marine fish from different temperature zones: the tropical puffer, Canthigaster cinctus, and boreal whitespotted greenling, Hexagrammos stelleri. It was shown that both dispersion under bright illumination and aggregation at darkening are slower or decrease at lower temperatures when examined in the range of 12–27°C. The mean speed of the pigment translocations in the individual cell process was 0.38 μm/s at the highest temperature examined, with a range of 0.17–1.0 μm/s. Near the middle of the temperature range, the dynamic characteristics of cell pigment movement in tropical and boreal species were rather close, suggesting that there would be little divergent adaptations with respect to the mechanisms of the pigment transport. Corneal chromatophores are considered as a new promising model for cell motility studies.     

How Similar is the Coordination of Parental Roles Among Different Pairs? An Examination of a Monogamous Fish

Although most studies on biparental care assume that parents cooperate in raising offspring, few studies have documented how parents coordinate their activities. Using the biparental convict cichlid (Archocentrus nigrofasciatum) we compared the parental behavior of both single (‘widowed’) parents and individuals within pairs during the 5 d when the offspring were in the relatively uniform and stationary wriggler stage. In particular, we were interested in the consistency of day‐to‐day parental activities among single individuals and among individuals within pairs. Single parents showed differences in most parental activities that were consistent from one day to the next. This day‐to‐day consistency remained after an intruder was added and / or the mate was present. Thus, although the social context changed (i.e., presence or absence of mate, presence or absence of an intruder), an individual's consistency remained. The male and female within pairs were significantly correlated in the time spent on most parental activities across experimental pairs. Thus, while individuals within pairs were unique in their performance of a parental activity, paired males and females managed a high degree of correlation (i.e., coordination). In general, pairs were homogeneous in the degree to which males and females were correlated across different parental activities.     

Regulatory Control of Both Microtubule‐ and Actin‐dependent Fish Melanosome Movement

In fish melanophores, melanosomes can either aggregate around the cell centre or disperse uniformly throughout the cell. This organelle transport involves microtubule‐ and actin‐dependent motors and is regulated by extracellular stimuli that modulate levels of intracellular cyclic adenosine 3‐phosphate (cAMP). We analysed melanosome dynamics in Atlantic cod melanophores under different experimental conditions in order to increase the understanding of the regulation and relative contribution of the transport systems involved. By inhibiting dynein function via injection of inhibitory antidynein IgGs, and modulating cAMP levels using forskolin, we present cellular evidence that dynein is inactivated by increased cAMP during dispersion and that the kinesin‐related motor is inactivated by low cAMP levels during aggregation. Inhibition of dynein further resulted in hyperdispersed melanosomes, which subsequently reversed movement towards a more normal dispersed state, pointing towards a peripheral feedback regulation in maintaining the evenly dispersed state. This reversal was blocked by noradrenaline. Analysis of actin‐mediated melanosome movements shows that actin suppresses aggregation and dispersion, and indicates the possibility of down‐regulating actin‐dependent melanosome movement by noradrenaline. Data from immuno‐electron microscopy indicate that myosinV is associated with fish melanosomes. Taken together, our study presents evidence that points towards a model where both microtubule‐ and actin‐mediated melanosome transport are synchronously regulated during aggregation and dispersion, and this provides a cell physiological explanation behind the exceptionally fast rate of background adaptation in fish.     

海洋野生鱼酶解提取鱼油的工艺分析

海洋野生鱼与养殖鱼比较, 其鱼油中含更多的二十碳五烯酸（EPA）、二十二碳六烯酸（DHA）、脂溶性维生素等活性成分。为提高海洋野生鱼的利用价值, 以野生小带鱼为原料进行酶法提油工艺研究。分析了不同的温度, 时间, pH值等影响因素下的提取、萃取以及离心效果, 以响应面法确定了最佳的酶解工艺条件: 液固比为6、pH7.3、酶量1000 u/g原料、搅拌速度200 r/min、45oC酶解90 min; 最优萃取条件: 萃取剂100 mL(每20 g鱼糜原料)、pH4.0、40oC萃取25 min; 离心条件: 离心速度3000 r/min (1865 g)、离心时间10 min。上述工艺条件下提油率为79.90%。改进了传统的鱼油提取工艺, 在活性成分保护上有较大改善。     

Movement of thermowaves over the cerebral cortex in the white rat

Thermal spatial distribution and temperature pattern were recorded using techniques of thermovision and digital image processing through the intact skull during acute experiments on white rats immobilized using myorelaxants or anesthetized with Nembutal. Under certain circumstances faint cortical thermowaves of 0.2-0.1°C were seen to arise and move 8–30 mm across the cortex for 2–9 sec at a speed of 2–10 mm per sec. One of the trajectories of movement detected was circular in shape; the thermowave would start off in one hemisphere, spread across it in either direction, and cross to the other hemisphere. It would then move through the second hemisphere to the opposite side and finally return to the original area. Movement of the waves also followed linear and arc-shaped trajectories, sometimes but not always crossing over to the opposite hemisphere. The mechanisms and implications of this phenomenon are discussed.Institute of Higher Nervous Activity and Neurophysiology, Academy of Sciences of the USSR, Moscow. Translated from Neirofiziologiya, Vol. 18, No. 3, pp. 340–346, May–June, 1986.     

海洋野生鱼酶解提取鱼油的工艺分析

海洋野生鱼与养殖鱼比较, 其鱼油中含更多的二十碳五烯酸（EPA）、二十二碳六烯酸（DHA）、脂溶性维生素等活性成分。为提高海洋野生鱼的利用价值, 以野生小带鱼为原料进行酶法提油工艺研究。分析了不同的温度, 时间, pH值等影响因素下的提取、萃取以及离心效果, 以响应面法确定了最佳的酶解工艺条件: 液固比为6、pH7.3、酶量1000 u/g原料、搅拌速度200 r/min、45oC酶解90 min; 最优萃取条件: 萃取剂100 mL(每20 g鱼糜原料)、pH4.0、40oC萃取25 min; 离心条件: 离心速度3000 r/min (1865 g)、离心时间10 min。上述工艺条件下提油率为79.90%。改进了传统的鱼油提取工艺, 在活性成分保护上有较大改善。     

Analysis of Micro-Rearrangements in 25 Eukaryotic Species Pairs by SyntenyMapper

High-quality mapping of genomic regions and genes between two organisms is an indispensable prerequisite for evolutionary analyses and comparative genomics. Existing approaches to this problem focus on either delineating orthologs or finding extended sequence regions of common evolutionary origin (syntenic blocks). We propose SyntenyMapper, a novel tool for refining predefined syntenic regions. SyntenyMapper creates a set of blocks with conserved gene order between two genomes and finds all minor rearrangements that occurred since the evolutionary split of the two species considered. We also present TrackMapper, a SyntenyMapper-based tool that allows users to directly compare genome features, such as histone modifications, between two organisms, and identify genes with highly conserved features. We demonstrate SyntenyMapper''s advantages by conducting a large-scale analysis of micro-rearrangements within syntenic regions of 25 eukaryotic species. Unsurprisingly, the number and length of syntenic regions is correlated with evolutionary distance, while the number of micro-rearrangements depends only on the size of the harboring region. On the other hand, the size of rearranged regions remains relatively constant regardless of the evolutionary distance between the organisms, implying a length constraint in the rearrangement process. SyntenyMapper is a useful software tool for both large-scale and gene-centric genome comparisons.     

医患冲突引起群体性事件演变机理研究

通过背景、内部动力、外部引爆、关系结构和功能5个方面来分析研究医患冲突引起群体性事件的演变机理,以期减少及防止医患冲突引起群体性事件的发生,同时对处置此类群体性事件也有着重要的借鉴意义。     

Fish communities diverge in species but converge in traits over three decades of warming

Describing the spatial and temporal dynamics of communities is essential for understanding the impacts of global environmental change on biodiversity and ecosystem functioning. Trait‐based approaches can provide better insight than species‐based (i.e. taxonomic) approaches into community assembly and ecosystem functioning, but comparing species and trait dynamics may reveal important patterns for understanding community responses to environmental change. Here, we used a 33‐year database of fish monitoring to compare the spatio‐temporal dynamics of taxonomic and trait structure in North Sea fish communities. We found that the majority of variation in both taxonomic and trait structure was explained by a pronounced spatial gradient, with distinct communities in the southern and northern North Sea related to depth, sea surface temperature, salinity and bed shear stress. Both taxonomic and trait structure changed significantly over time; however taxonomically, communities in the south and north diverged towards different species, becoming more dissimilar over time, yet they converged towards the same traits regardless of species differences. In particular, communities shifted towards smaller, faster growing species with higher thermal preferences and pelagic water column position. Although taxonomic structure changed over time, its spatial distribution remained relatively stable, whereas in trait structure, the southern zone of the North Sea shifted northward and expanded, leading to homogenization. Our findings suggest that global environmental change, notably climate warming, will lead to convergence towards traits more adapted for novel environments regardless of species composition.     

Calculating Turns/Amplitude peak ratio of EMG interference pattern by using logistic curve fitting

The aim of the study was to test whether logistic curve fitting (LCF) of Turns = f(Amplitude) plots of single muscle contractions can provide a reliable alternative method for peak-ratio calculation. EMG signals from 74 biceps and 62 triceps contractions were analyzed by applying LCF to Turns = f(Amplitude) plots. Peak-ratio (peak-ratio2) could then be calculated as the point of the fitted line with the highest Turn/Amplitude value. LCF yielded R² values > 0.95 in the vast majority of contractions studied (68/74 biceps and 53/62 triceps). Peak-ratio2 values had a very strong linear relationship with the corresponding values calculated by the traditional method (peak-ratio1) in both normal and neurogenic conditions. Furthermore, ROC curve analysis showed that peak-ratio1 and peak-ratio2 had similar AUC values. Based on the LCF equation, peak-ratio = T2*(p − 1)/A0*p*(p − 1)^1/p. Therefore, peak-ratio is proportional to the maximum number of turns (T2), positively correlated to the rate of turns’ increment at the midpoint of the curve (p) and negatively correlated to the mean amplitude at the midpoint of the curve (A0). A0 is the variable that best discriminates between normal and neurogenic conditions. We provide an alternative method for peak-ratio calculation and show the variables that influence this sensitive marker of neurogenic disease.     

Conflicts between humans over wildlife management: on the diversity of stakeholder attitudes and implications for conflict management

Conflicts involving wildlife are, in essence, often conflicts between human parties with differing wildlife management objectives. However, the study and management of wildlife conflicts often focuses on the ecological context without addressing disagreements between people over these objectives. This research uses quantitative approaches to examine actors’ views on a complex wildlife-related conflict: a raptor of conservation concern that impacts on game-bird management. Four dominant elements of the debate emerged from initial semi-structured interviews: perceptions of conflict related issues; perceptions of each other; perceived barriers to consensus within the debate; and assessment of proposed practical management solutions. A quantitative survey that built on these elements demonstrates the degree to which perceptions differ between groups and how local variation in these elements may be obscured in a regional or national level debate. The findings emphasise the importance of understanding the social issues involved in wildlife related conflicts if management aims are to be agreed and achieved.     

脱落酸对植物气孔运动的调控作用

主要介绍脱落酸对气孔运动的调节作用及其调控气孔运动机制(包括对引起气孔关闭信号转导中第二信使、离子通道、酶活性、膜电压和肌动蛋白细胞合架的调控等)的研究进展。