Water flow induced transport of Pseudomonas fluorescens cells through soil columns as affected by inoculant treatment

Abstract Water flow induced transport of Pseudomonas fluorescens cells through soil columns was measured as affected by the inoculant treatment. Bacterial cells were introduced into the topsoil of columns, either encapsulated in alginate beads of different types or mixed with bentonite clay in concentrations ranging from 0.5 to 5.0% (w/v). Survival of bacterial cells was improved with the use of alginate or bentonite. Transport, as determined by destructive sampling of the columns, was reduced with the use of alginate encapsulation. Drying of the beads had no influence on transport. The presence of bentonite in the topsoil, either pre-mixed through the soil, or applied as a slurry together with the bacteria, also reduced transport, except when 0.5% was pre-mixed through the soil. P. fluorescens cells encapsulated in alginate beads prepared with water and supplemented with skim milk powder and bentonite showed the best survival during the time of the experiment and the most reduced transport compared to the control. Therefore, cells encapsulated in this way are suitable, due to their optimal survival and reduced spread, for use in a field experiment with genetically manipulated bacteria.     

Biosorption of phosphate from synthetic wastewater by biosolids

The aim of this study was to determine the potential of phosphate (P) removal from wastewater by biosolids prepared by the immobilization of P-accumulating bacteria onto organic bentonite. Organic bentonite was prepared by treating bentonite clay with quaternary ammonium salt — cetyltrimetylammonium (CTA) bromide. Cation exchange capacity (CEC) of the bentonite was found to be 179.0 meq/100 g of the dry bentonite. The CTA occupied ca. 175% of the CEC. Modification of bentonite with CTA in amounts higher than 55% of the CEC resulted in the change of zeta potential of particles from negative to positive. Only in reactors containing organic bentonite samples occupied with 3.5 and 28% of the CEC was P efficiently removed from wastewater by combined adsorption and bacterial uptake in the biomass. Organic bentonite samples with higher CTA loadings (from 55 to 175% of the CEC) showed bactericidal effects. To enhance P removal from wastewater in the aerated biological system, biosolids consisting of P-accumulating bacteria and organic bentonite can be used, but special attention should be given to the configuration of sorbed CTA molecules and its potential desorption.     

The adsorption and release of tylosin by clays and soils

Summary The uptake and release of tylosin by Wyoming bentonite, Ca⁺⁺ montmorillonite, illite (Fithian Illinois) and kaolin (china clay) was studied. The adsorption capacities of bentonite and montmorillonite for tylosin were found to be 190 and 65 g mg^–1 respectively, while the adsorption capacities of illite and kaolinite were found to be 22 and 6.5 g mg^–1. 7.6 and 7.4% respectively of the tylosin adsorbed by bentonite and montmorillonite, and 30 and 25% respectively of the tylosin adsorbed by illite and kaolinite, was released in phosphate buffer.The presence of tylosin in two different soils amended with tylosin fermentation waste was also studied, and the effect of temperature on tylosin release was examined in one of the soils. The concentration of tylosin in the soil water was found to be related more to the concentration of tylosin fermentation waste than to the incubation temperature. The amounts of tylosin present in the initial leachates of the two soils, a modified John Innes compost and a limestone waste, were found to be in excess of the minimum inhibitory concentrations for susceptible bacteria. It is hypothesised that in these particular soils if the tylosin is not broken down by microbial action it could affect susceptible populations of bacteria.     

Investigation of Microorganisms in Bentonite Deposits

Microbiological characteristics of bentonite deposits were investigated as a natural analogue of microbial behavior in the buffer material for geological disposal of radioactive waste. Distributions of microorganisms in bentonite were examined at four sites in two different bentonite deposits in Japan. The sites included pond bottom, wetland, and wet mine gallery environments where bentonite layers have been left undisturbed for 2 to 30 years. Excavation was performed without using drilling water and the center parts of the cores were used for microbial examination. Plate counts with R2A medium of aerobic and anaerobic bacteria at the drilling mouth ranged from 10⁵ to 10⁷/g DW (dry weight) and from 10³ to 10⁶/g DW, respectively. The CFDA-AM (Carboxyfluorescein diacetate acetoxymethyl ester) cell counts ranged from 10⁶ to 10⁹/g DW. Bacterial numbers in the bentonite layers declined with distance from the drilling mouth; both aerobes and anaerobes were less than 10²/g DW and CFDA-AM cell counts less than 10⁶/g DW for core samples taken from approximately 1 m depth, except at the pond bottom. These results suggest that microbial activity in natural bentonite is lower than in typical soils and aquatic sediments and does not spread easily.     

In situ bacterial colonization of compacted bentonite under deep geological high-level radioactive waste repository conditions

Subsurface microorganisms are expected to invade, colonize, and influence the safety performance of deep geological spent nuclear fuel (SNF) repositories. An understanding of the interactions of subsurface dwelling microbial communities with the storage is thus essential. For this to be achieved, experiments must be conducted under in situ conditions. We investigated the presence of groundwater microorganisms in repository bentonite saturated with groundwater recovered from tests conducted at the Äspö underground Hard Rock Laboratory in Sweden. A 16S ribosomal RNA and dissimilatory bisulfite reductase gene distribution between the bentonite and groundwater samples suggested that the sulfate-reducing bacteria widespread in the aquifers were not common in the clay. Aerophilic bacteria could be cultured from samples run at ≤55°C but not at ≥67°C. Generally, the largely gram-negative groundwater microorganisms were poorly represented in the bentonite while the gram-positive bacteria commonly found in the clay predominated. Thus, bentonite compacted to a density of approximately 2 g cm^?3 together with elevated temperatures might discourage the mass introduction of the predominantly mesophilic granitic aquifer bacteria into future SNF repositories in the long run.     

A determination of protective microhabitats for bacteria introduced into soil

Abstract Survival studies with rhizobia introduced into loamy sand showed that a kaolinite amendment of the soil improved the survival of Rhizobium , and that bentonite had a very strong positive effect on rhizobial survival. The survival level was significantly higher in soil amended with 10% than with 5% bentonite. The amount of water present in the bentonite amended soil had a significant influence on rhizobial survival; in drier soil, survival levels were highest. For the loamy sand, the loamy sand amended with 5 and 10% bentonite or with 10% kaolinite, the number of rhizobial cells surviving on day 57 after introducing 2.5–5.0×10⁷ cells g⁻¹ dry soil could be described using the distribution of pores from three size classes in a mathematical relationship. Pores with necks < 3 μm and between 3 and 6 μm positively affected the survival of introduced rhizobia whereas pores with necks > 6 μm had a negative effect.     

Mixing and sulphate-reducing activity of bacteria in swelling, compacted bentonite clay under high-level radioactive waste repository conditions

AIM: The fate of micro-organisms in the bentonite clay surrounding high-level radioactive waste (HLW)-containing copper canisters in a future Swedish underground (500 m) repository were investigated. METHODS AND RESULTS: Laboratory experiments were designed in which the mixing of various bacterial species with swelling bentonite was studied. A clear trend of fewer cultivable bacteria at depth was seen in the clay. This trend was consistent as the incubation time was increased from 8 h to 28 weeks. Sulphate-reducing bacteria were found to be active, reducing sulphate at the lowest density studied, 1.5 g cm-3, but sulphate reduction activity ceased at higher densities. CONCLUSIONS: The number of viable micro-organisms in an HLW repository bentonite clay buffer will decrease rapidly during swelling and very few viable cells will be present at full compaction. SIGNIFICANCE AND IMPACT OF THE STUDY: Sulphate-reducing bacteria will most probably not be able to induce corrosion of HLW-containing copper canisters.     

Atrazine degradation by encapsulated Rhodococcus erythropolis NI86/21

AIMS: To develop an encapsulation procedure for Rhodococcus erythropolis NI86/21 and demonstrate its use as a slow-release inoculant for reducing atrazine levels in aquatic and terrestrial environments. METHODS AND RESULTS: Alginate encapsulation procedures were developed for the atrazine-degrading bacteria R. erythropolis NI86/21. Several bead amendments, including bentonite, powdered activated carbon (PAC) and skimmed milk (SM), were evaluated for slow release of R. erythropolis NI86/21 and efficacy of atrazine degradation. All bead types demonstrated a capacity to degrade atrazine in basal minimal nutrient buffer whilst continually releasing viable bacterial cells. We found that the addition of bentonite hastened cell release whilst SM sustained cell viability in bead formulations. Reducing the percentage of SM to 1% (w/v) resulted in faster rates of atrazine degradation in both liquid and soil, and was found to prolong cell survival upon bead storage. Limited oxygen transfer affects the capacity of the encapsulated R. erythropolis cells to degrade atrazine. CONCLUSIONS: Degradation studies have demonstrated the efficacy of R. erythropolis encapsulated cells to degrade atrazine in amended liquid and soil. However, in their current formulation, the wet alginate-based beads are impractical for field application because of their poor cell viability during storage. SIGNIFICANCE AND IMPACT OF THE STUDY: R. erythropolis NI86/21-encapsulated cells have the potential to reduce atrazine residues in a number of soil and water environments, possibly ensuring the continued registration and use of atrazine in agriculture by minimizing or eliminating nontarget effects.     

Influence of the microorganism support on the kinetics of anaerobic fermentation of condensation water from thermally concentrated olive mill wastewater

Two materials of different structure, sepiolite and bentonite, evaluated as supports for the microorganisms effecting anaerobic fermentation, behaved differently towards condensation water from thermally concentrated olive mill wastewater from a kinetic point of view. Assuming the overall anaerobic digestion process to conform to first-order kinetics, the apparent kinetic constant for the digester including sepiolite as support was 1.12 day^-1, while that of the digester using the bentonite support was 0.73 day^-1. Thus, the apparent kinetic constant of the process was increased by 35% with the use of sepiolite. The yield coefficient, Y_p/s, was 0.344 and 0.318 litres CH₄ STP/g COD for the sepiolite and bentonite supports respectively.     

Effects of bentonite clay solids on poliovirus concentration from water by microporous filter methods

To determine whether suspended solids interfere with enteric virus recovery from water by microporous filter methods, the effects of bentonite clay solids at a concentration of 10 nephelometric turbidity units on the recovery of poliovirus type 1 from seeded, activated carbon-treated, filtered tap water were studied. Volumes (500 ml) of virus-laden water at pH 5.5 or 7.5, with and without 50 mM MgCl2, were filtered through 47-mm-diameter, electropositive (Virosorb 1MDS) and electronegative (Filterite) filters that had been pretreated with Tween 80 to minimize direct virus adsorption to filter surfaces. Bentonite solids enhanced virus retention on both types of filters, even under conditions in which viruses were not solids associated. However, bentonite solids also interfered with elution of retained viruses when eluting with 0.3% beef extract-50 mM glycine (pH 9.5). Under some conditions, overall virus recoveries were lower from water with bentonite solids than from solids-free control water. The results of this study indicate that clay turbidity can interfere somewhat with virus recovery by current microporous filter methods.     

Effects of bentonite clay solids on poliovirus concentration from water by microporous filter methods.

To determine whether suspended solids interfere with enteric virus recovery from water by microporous filter methods, the effects of bentonite clay solids at a concentration of 10 nephelometric turbidity units on the recovery of poliovirus type 1 from seeded, activated carbon-treated, filtered tap water were studied. Volumes (500 ml) of virus-laden water at pH 5.5 or 7.5, with and without 50 mM MgCl2, were filtered through 47-mm-diameter, electropositive (Virosorb 1MDS) and electronegative (Filterite) filters that had been pretreated with Tween 80 to minimize direct virus adsorption to filter surfaces. Bentonite solids enhanced virus retention on both types of filters, even under conditions in which viruses were not solids associated. However, bentonite solids also interfered with elution of retained viruses when eluting with 0.3% beef extract-50 mM glycine (pH 9.5). Under some conditions, overall virus recoveries were lower from water with bentonite solids than from solids-free control water. The results of this study indicate that clay turbidity can interfere somewhat with virus recovery by current microporous filter methods.     

Modeling of inorganic contaminant transport in dense bentonite

To assess the safety of the waste disposal site, a knowledge of the molecular diffusion coefficient through the bentonite‐clay barrier is required. The methods commonly used to determine molecular diffusion coefficient in clay are very time consuming. Because of the large number of species involved in the radioactive waste disposal site, a model that allows diffusion coefficient to be predicted for use is desirable. Models based on free water have been proposed but are found to be inadequate for compacted bentonitic clays. A model that incorporates clay‐species‐water interaction is presented for dense bentonite. The modeling results show that the diffusion coefficient depends on the charge nature and size of the diffusing species, water chemistry, temperature, and soil structure. The predicted diffusion coefficients for some species are shown to be in excellent agreement with those measured in dense bentonite.     

Mechanism of ammonium adsorption from wastewater by modified bentonite and optimization by response surface

Three modified bentonites, dry alkali modification, thermal modification, and acid modification, were prepared and characterized by XRD and FTIR. Batch experiments were performed to evaluate their efficiency as adsorbent for ammonium removal. Multi-variables interaction effects were evaluated by Response Surface Methodology. The results showed that the adsorption efficiency of ammonium by dry alkali modification bentonite was the best in three modified methods; the next was that of thermal modification. The crystalline structure of bentonite was significantly changed with dry alkali modification. Na₂SiO₃ and Na₂AlSi₃O₈(OH) were achieved by bentonite with powder NaOH modification. The increase in the mole ratio of exchangeable cations indicated that the adsorption efficiency of ammonium increased; while the layer spacing of bentonite expanded with the amount of the adsorbed water and hydrated water increased by thermal modification. In multi-variables interaction effects (holding time, calcination temperature, pH, dosage), the most significant factors were calcination temperature and dosage.     

Ageing of added copper in bentonite without and with humic acid

Abstract

The ageing of metals in soils plays an important role in assessing ecological risk and soil quality criteria, it therefore is necessary to understand the ageing processes. Using a sequential extraction procedure and a parabolic diffusion equation, the ageing of added copper(Cu) in bentonite without and with humic acid (HA) was investigated as a function of incubation time over one year. At the same time, the effect of pH on Cu ageing in bentonite with HA was also studied. The most labile Cu fractions (water-soluble Cu, Cu extracted by NH₄NO₃ and EDTA) gradually transformed into less extractable forms. The modelled diffusion equation suggested that the ageing processes were controlled by surface nucleation/precipitation and diffusion. In the presence of HA, the contribution from surface nuclea-tion/precipitation increased significantly, whereas that from diffusion decreased, this indicated the addition of HA significantly enhanced the short-term ageing by complexation with Cu ions, but strongly inhibited the further diffusion of Cu ions into interlayer of bentonite during long-term ageing owing to the more stable complexes formed on solid surface. With increasing pH in bentonite with HA, the apparent diffusion rate coefficient (D/r²) increased greatly, which showed that during long-term ageing pH played an important role in reducing the extractability as a result of the significant increase in residual Cu (RES-Cu), the most inert fraction, due to micropore diffusion.     

Development of new formulations of Bacillus subtilis for management of tomato damping-off caused by Pythium aphanidermatum

Formulations of a strain of Bacillus subtilis AUBS-1 inhibitory to the growth of the damping-off pathogen, Pythium aphanidermatum, were developed for seed treatment. The formulations included a talc-based powder, lignite-based powder, lignite+fly ash-based powder, wettable powder, bentonite-paste, polyethylene glycol (PEG) paste and a water-dispersible tablet. Formulations were stored at room temperature for 2 years and frequently sampled to test their shelf life. Populations of bacteria in the formulations were stable for up to 2 years storage at room temperature (28°C). Viability of propagules in lignite, lignite+fly ash, bentonite paste, wettable powder and water dispersible tablet formulations was 100% for up to 1 year. However, the viability of propagules was significantly reduced in talc, wettable powder, PEG paste and tablet formulations beyond 1 year of storage. Seed treatment of tomato with these formulations resulted in effective control of damping-off caused by P. aphanidermatum, and also enhanced plant biomass under glasshouse and field conditions. Active rhizosphere colonization by the bacterium was observed on tomato plants grown from seeds treated with the above formulations.     

Colloidal suspensions of clay or titanium dioxide nanoparticles can inhibit leaf growth and transpiration via physical effects on root water transport

A laboratory investigation was conducted to determine whether colloidal suspensions of inorganic nanoparticulate materials of natural or industrial origin in the external water supplied to the primary root of maize seedlings ( Zea mays L.) could interfere with water transport and induce associated leaf responses. Water flow through excised roots was reduced, together with root hydraulic conductivity, within minutes of exposure to colloidal suspensions of naturally derived bentonite clay or industrially produced TiO₂ nanoparticles. Similar nanoparticle additions to the hydroponic solution surrounding the primary root of intact seedlings rapidly inhibited leaf growth and transpiration. The reduced water availability caused by external nanoparticles and the associated leaf responses appeared to involve a rapid physical inhibition of apoplastic flow through nanosized root cell wall pores rather than toxic effects. Thus: (1) bentonite and TiO₂ treatments also reduced the hydraulic conductivity of cell wall ghosts of killed roots left after hot alcohol disruption of the cell membranes; and (2) the average particle exclusion diameter of root cell wall pores was reduced from 6.6 to 3.0 nm by prior nanoparticle treatments. Irrigation of soil-grown plants with nanoparticle suspensions had mostly insignificant inhibitory effects on long-term shoot production, and a possible developmental adaptation is suggested.     

Protection of Rhizobium by bentonite clay against predation by flagellates in liquid cultures

Abstract Bentonite clay strongly hampered the activity of the flagellate Bodo soltans in liquid culture, and thereby improved the survival of Rhizobium . A possible coating of bacteria and/or flagellates did not seem to play a part in protecting rhizobia from flagellates. Bentonite did not release any substances toxic to B. saltans during the incubation period. It is suggested that, in liquid cultures, bentonite clay increases the minimum level to which rhizobia can be predated upon, thereby giving rise to the presence of higher rhizobial cell concentrations at the end of the incubation period.     

Effect of solid particles on the growth and endurance to heat stress of garbage compost microorganisms

Summary A mixed population of microorganisms isolated from the municipal garbage compost was cultivated in a full nutrient liquid medium under aerobic conditions. In order to simulate the presence in compost of both noncolloidal and colloidal solid particles, glass beads, bentonite, or humic acid were added to the cultures. The growth of microorganisms and the CO₂ evolution rose with bentonite and humic acid, but the humic acid did not enhance the growth of the potential pathogenic bacteria. Solid particles appreciably influenced the endurance to heat stress of microorganisms supporting their adaptation to the changed temperature.     

Effect of organic composition of humic acids on Enterobacteria multiplication

Enterobacteria have been found to be capable of active multiplication in humic acids isolated from bentonite clays containing carbohydrates, lipids and proteins. Humic acids fractions have been found to be heterogeneous by their molecular weight and organic composition; consequently, they have been found to produce different influence in the multiplication of bacteria.     

Integration of bacteria capture via filtration and in situ lysis for recovery of plasmid DNA under industry-compatible conditions

Combining capture and lysis of the bacteria with partial purification of the plasmid DNA is beneficial for the design of efficient plasmid production processes at larger scale. Such an approach is possible when the bacteria are captured by filtration. Taking industrial requirements into account, however, such a capture requires complex filtration mixtures containing retentive additives such as bentonite and polycations. This makes the straightforward transfer of established lysis protocols to in situ lysis difficult. In this contribution, the different steps of such a protocol are designed for complex filter cakes, including fragilization (by lysozyme), lysis (alkaline pH/acidic pH, 70/37 degrees C, urea/NaCl/Triton), and specific elution (pH, NaCl, CaCl2, guanidinium hydrochloride). Results are compared in regard to plasmid quality (topoisomeric form) and quantity (compared to the yield obtained by a commercial miniprep of a small aliquot of the bacteria suspension from the bioreactor). Best results in these terms were obtained by the Triton lysis protocol performed at 37 degrees C (30 min of contact with a lysis buffer composed of 50 mM Tris pH 8, 1% Triton, 1 g/L lysozyme, and 6 M guanidinium hydrochloride) followed by the specific elution of the plasmid DNA in 50 mM Tris buffer pH 8.