Response of epilithic diatom assemblages to urbanization influences

Urbanization has long been recognized to alter the hydrology, water quality and channel form of waterways. Recently, consideration of urban impacts on waterways has expanded to include assessment of the aquatic biota, generally focusing upon the macroinvertebrate fauna. This study compares the impacts of urbanization on the structure of stream benthic diatom communities in 16 first- and second-order streams in the east of Melbourne, Australia. Relationships between the physical elements of urbanization, water quality and diatom communities were examined using multivariate analyses with compositional similarity, and univariate analyses with selected diatom species and indices,. There was a strong negative correlation between urban density and the diatom indices of water quality. The element of urbanization most strongly related to the measured decline in the diatom community was drainage connection. Electrical conductivity was the most influential water quality variable. It is hypothesized that, in addition to increasing electrical conductivity, drainage connection may be impacting the diatom community by increasing the delivery of phosphorus during small storm events. The study suggests that reducing directly piped drainage connection using infiltration and retention is a logical step in the mitigation of urban impacts upon receiving streams. A corollary part of the project indicated strong potential for using overseas diatom indices in studies on water quality in southeastern Australia.     

Does the process of drying submerged macrophytes affect community structure and composition of epiphytic diatoms?

This study investigates whether the process of pressing and drying a macrophyte host affects community structure and composition of epiphytic diatom communities. Epiphytic diatoms on submerged macrophytes from carbonate rivers and streams in southern Bavaria, Germany were sampled in order to study community structure and composition. Simultaneously, a specimen of the submerged macrophyte was taken to create a collection of dried plants. After 6months of preservation, diatom samples were taken from the herbarium macrophytes. Detrended correspondence analysis, diversity and evenness results indicate that recent and dried communities are indistinguishable. These results suggest that epiphytic diatom communities sampled from historic herbarium macrophytes can be utilised as bioindicators to assess former water quality.     

Comparison of diatom community structure from epilithon and fish guts: implications for inferring past changes in water quality

The sampling skills of three common European fish species (Barbus barbus, Chondrostoma nasus and Squalius cephalus) were tested to assess their potential as biomonitors of past changes in river water quality through the analysis of diatoms in fish guts. The study was performed on three rivers with different chemical and physical conditions. Comparison of similarity indices revealed low diatom assemblage resemblance between epilithic samples and samples collected from fish guts at the same locality. In contrast, a mixed-effect linear model identified significant differences between locations through comparison of diatom-based water quality indices. Among fish species, diatom indices calculated from gut samples of B. barbus and C. nasus were in most cases not significantly different from those from epilithic samples while those from S. cephalus were often significantly different. The results of the study demonstrate that diatom analysis of fish guts provides a clear distinction between eutrophic and hypereutrophic rivers. Finer nutrient variations within hypereutrophic conditions were also found to be significant for some diatom indices. In this context, choice of appropriate diatom water quality index proved to be crucial in maximizing the sensitivity of the method.     

Non-wadeable river bioassessment: spatial variation of benthic diatom assemblages in Pacific Northwest rivers,USA

Current bioassessment efforts are focused on small wadeable streams, at least partly because assessing ecological conditions in non-wadeable large rivers poses many additional challenges. In this study, we sampled 20 sites in each of seven large rivers in the Pacific Northwest, USA, to characterize variation of benthic diatom assemblages among and within rivers relative to environmental conditions. Analysis of similarity (ANOSIM) indicated that diatom assemblages were significantly different among all the seven rivers draining different ecoregions. Longitudinal patterns in diatom assemblages showed river-specific features. Bray–Curtis dissimilarity index values did not increase as a function of spatial distance among the sampled reaches within any river but the Malheur. Standardized Mantel r of association between assemblage similarity and spatial distance among sites ranged from a high of 0.69 (Malheur) to a low of 0.18 (Chehalis). In the Malheur River, % monoraphids, nitrogen-tolerant taxa, and beta-mesosaprobous taxa all decreased longitudinally while % motile taxa, especially Nitzschia, showed an opposite trend, reflecting a strong in-stream water quality gradient. Similar longitudinal trends in water quality were observed in other rivers but benthic diatom assemblages showed either weak response patterns or no patterns. Our study indicated that benthic diatom assemblages can clearly reflect among-river factors. The relationships between benthic diatom assemblages and water quality within each river may depend on the strength of the water quality gradients, interactive effects of water quality and habitat conditions, and diatom sampling design.     

A new cell primo-culture method for freshwater benthic diatom communities

A new cell primo-culture method was developed for the benthic diatom community isolated from biofilm sampled in rivers. The approach comprised three steps: (1) scraping biofilm from river pebbles, (2) diatom isolation from biofilm, and (3) diatom community culture. With a view to designing a method able to stimulate the growth of diatoms, to limit the development of other microorganisms, and to maintain in culture a community similar to the original natural one, different factors were tested in step 3: cell culture medium (Chu No 10 vs Freshwater “WC” medium modified), cell culture vessel, and time of culture. The results showed that using Chu No 10 medium in an Erlenmeyer flask for cell culture was the optimal method, producing enough biomass for ecotoxicological tests as well as minimising development of other microorganisms. After 96 h of culture, communities differed from the original communities sampled in the two rivers studied. Species tolerant of eutrophic or saprobic conditions were favoured during culture. This method of diatom community culture affords the opportunity to assess, in vitro, the effects of different chemicals or effluents (water samples and industrial effluents) on diatom communities, as well as on diatom cells, from a wide range of perspectives.     

Use of benthic diatom communities to evaluate water quality in rivers of southern Poland

Biological and chemical data were processed to estimate trophic stage and degree of pollution in several streams and rivers in southern Poland. The majority were eutrophic and some of them heavily polluted; only a few were oligo-mesotrophic. The differences in the water quality of the rivers were reflected by different types of diatom community and also by the values for some diatom indices, which were calculated using the latest version of the 'Omnidia' database software. Except for the Sládeček's index, all diatom indices correlated significantly with organic load (COD), oxygen concentration, conductivity and most of the measured ions. Some indices showed a significant negative correlation with trophic level (expressed by NH₄-N and PO₄-P). In general, IPS (Specific Pollution Sensitivity Index) and GDI (Generic Diatom Index) indices gave the best results. Among the investigated diatom communities, only a few taxa indicated oligo-mesotrophy and oligo-β-mesosaprobity. Most of the sites were characterised by a greater relative contribution of eutraphent and tolerant ones as well as α-mesosaprobic and polysaprobic diatoms. This study suggests that the structure of benthic diatom communities and diatom indices, especially GDI, can be applied for monitoring rivers in Poland. This revised version was published online in June 2006 with corrections to the Cover Date.     

Response of epilithic diatom communities to environmental gradients along an Ecuadorian Andean River

Epilithic diatom communities are particularly suitable for the evaluation of freshwater quality. In Ecuador, however, no water quality index includes this biotic parameter. This work is the first attempt in the country to determine the composition of epilithic diatom communities associated with different degrees of eutrophication. This was accomplished by measuring physical, chemical and microbiological variables at five sampling sites along the Pita River, Ecuador, from August to December 2016. The results indicate a clear gradient of eutrophication from sampling sites P1 (good water) in the upper reaches to P5 (bad water) located in the lower reaches. Concerning diatom analyses, the results indicated a high diversity for tropical areas in terms of species richness, varying from S = 34 in headwaters to S = 42 downstream. Moreover, the results obtained suggest a lack of concordance with the trophic values given to some of the epilithic diatoms in the literature. There were also species that seem to be sensitive to downstream nutrient increases that were not considered as bioindicators in previous studies. We concluded that the trophic values of diatom species available in the scientific literature are not directly applicable to their sites in the Pita River. Hence, it is necessary to establish a trophic diatom index for the Andean region of Ecuador.     

扎龙湿地硅藻植物群落季节变化及其对环境的响应

扎龙湿地位于黑龙江省西部、松嫩平原乌裕尔河下游,是我国北方同纬度地区最完整的湿地。于2012年春、夏、秋3季,对扎龙湿地6个代表性区域进行硅藻标本采集,经观察鉴定,发现硅藻植物140个分类单位,包括121种19变种,隶属于2纲6目9科30属。羽纹纲物种较丰富,占总种类数的95%。硅藻植物群落呈现明显的季节演替,秋季硅藻种类丰富度及相对丰度明显高于春、夏两季,优势种多以淡水、半咸水、喜弱碱的种类为主,优势种与水体的盐度和酸碱度存在一定的响应关系。应用典范对应分析(Canonical Correspondence Analysis,CCA)探讨硅藻植物群落变化与环境因子之间的关系。CCA结果显示在扎龙湿地中,水温、电导率、pH、溶解氧是影响硅藻群落结构变化的主要因素,此外总氮、总磷也是硅藻群落季节演替的重要驱动因子。结合硅藻植物多样性指数和硅藻商对扎龙湿地水质进行综合评价,结果显示扎龙湿地整体为中-寡污带水体,部分水域水质较清洁,少数样点受人为因素影响,呈轻污染。     

Epilithic and epipelic diatoms in the Sandusky River,with emphasis on species diversity and water pollution

Benthic diatom communities were collected seasonally from silty and rocky substrates to survey the water quality of the Sandusky River. Even though species composition was highly variable along the river, recurrent changes in relative abundance of specific diatom taxa and changes in overall community composition delineated areas where discharge of treated sewage affected water quality of the river. Changes in species diversity (Shannon formula), not decreases in diversity, marked the site where greatest pollution had occurred. Problems with using species diversity indices to indicate pollution tend to be related to predicting decreases in diversity in response to decreases in water quality. Evidence in the Sandusky River and the theories of diatom community dynamics suggest that species diversity can be greater in polluted areas than less polluted areas.     

青弋江流域大型底栖动物群落结构及水质评价

研究河流大型底栖动物群落结构特征及水环境质量对水生态的保护与修复具有重要意义。以青弋江流域为研究对象,于2020年9月进行了大型底栖动物及水体理化因子的调查,采用相对重要性指数、生物多样性指数及Jaccard相似性系数分析了大型底栖动物群落结构特征,运用丰度/生物量比较曲线法及冗余分析法探究了底栖动物群落受到的干扰程度及其主要影响环境因子,最后利用水生态环境质量综合指数对河流水质进行评价。研究结果表明：(1)共采集鉴定大型底栖动物61种,隶属于3门6纲17目,平均丰度为265.9个/m~2,平均生物量41.6 g/m~2。相对重要性指数分析显示,日本沼虾(Macrobrachium nipponensis)、中国圆田螺(Cipangopaludina chinensis)、羽摇蚊(Chironomus plumosus)及扁蜉(Ecdyrus)为群落中的主要优势种。(2)由群落相似性分析知,Jaccard相似性系数较低,调查点位之间存在较强的空间异质性。(3)冗余分析表明,电导率、氨氮浓度及流速是影响底栖动物群落结构的主要环境因子。(4)生物指数分析结果显示该流域水质为轻度污染或中度污...     

Changes in riverine benthic diatom community structure along a chloride gradient

The application of salt is the primary means of deicing roads and highways in colder regions of north-eastern North America. This has increased the chloride concentrations of many lake and stream ecosystems. While this salinization has been documented, less is known about how increased salinity alters benthic communities in downstream ecosystems. Natural thresholds, at which there are large scale changes in community composition, have not yet been established for many types of contaminants, including chloride. The diatom community, which is sensitive to small changes in the ambient environment, has the potential to be a strong indicator of salinization effects on stream ecosystems. In this study, we sampled diatom communities in 41 streams across a salinity gradient throughout south central Ontario, Canada. We sampled benthic diatom assemblages in early May following complete snowmelt, when stream water chloride concentrations ranged from 5 to 502 mg/L. Based on redundancy analysis, we confirmed a strong association between the species composition of the diatom community and water conductivity, a commonly used index of stream salinity. Taxa indicator threshold analyses (TITAN) indicated the community changed substantially at chloride concentrations greater than 35 mg/L. We also found that, an indicator taxa, Meridion circulare, was extremely sensitive to high concentrations of salt and negatively correlated with chloride. In a wide synoptic survey of streams of our region, we found that streams in most developed watersheds exceed tolerance thresholds for benthic diatom communities. This work suggests that current chloride concentrations in urban watersheds are greatly exceeding the benthic community thresholds, for which improved management and regulatory practices are needed. Salinization thus appears to be an important feature of urban streams and needs to be considered as an important ecological driver in future studies.     

Responses of Epilithic Diatom Communities to Environmental Gradients in Some Finnish Rivers

Responses of the epilithic diatom communities to environmental gradients were analysed at 135 river stations in Finland. In addition, the biological quality of the water was evaluated using diatoms in five rivers having different types of human pressures. According to CCA, conductivity, total P, pH and humus content had the most significant effect on the diatom community structure. The ratio of the constrained axis (λ₁) and first unconstrained axis (λ₂) was highest for conductivity (1.21), total P (0.83) and pH (0.67). Physical factors had somewhat weaker effects. Five different diatom community types were separated in chemically different rivers using ordination. The effects of purified sewage on diatom‐inferred water quality estimates were strongest in late summer. The effects of cattle‐farming and cultivation were difficult to separate.     

Bioassessment in a metacommunity context: Are diatom communities structured solely by species sorting?

Aquatic ecosystems face a variety of anthropogenic pressures, urging the development of efficient biological indicators. In addition to local environmental conditions, the community structure of indicator organisms is affected by spatial processes, such as high and limited dispersal rates. Understanding the relative roles of environmental factors and spatial processes for ecological communities should thus be associated with bioassessment practices. We examined the main drivers, both environmental and spatial, influencing community structure and several indices derived from diatom communities. We sampled 81 stony littoral sites in a large boreal lake system (305 km²), where relatively large gradients in water chemistry (35 variables measured) exist, but no dispersal limitation can be expected. Instead, high dispersal rates should interfere with species sorting. Our response variables, including commonly-used diatom indices, diversity indices and taxonomic distinctness indices, were better explained by pure effects of spatial variables and shared effects of spatial and environmental variables than by pure effects of environmental variables. Thus, high dispersal rates between sites are likely to interfere with environmental filtering and can result in clear spatial structures in index values used in bioassessment. Bioassessment should thus acknowledge the importance of spatial processes and not take it for granted that only local environmental conditions determine index values. Failure to consider high dispersal rates may lead to biased information about the state of freshwater ecosystems. The same idea should also be considered in systems with similarly highly-connected sets of bioassessment sites, such as marine coastal systems and stream networks.     

Community concordance between fishes and benthic macroinvertebrates among adventitious and ordinate tributaries of a major river system

We examined patterns of concordance between macroinvertebrate and fish communities among adventitious and ordinate tributaries of the Monongahela River in southwestern Pennsylvania in order to determine their efficacy as mutual surrogates for the assessment of ecosystem integrity. Fish, macroinvertebrates, and 19 water quality parameters were sampled from 20 streams. Collected data were analyzed by principal components analysis, redundancy analysis, and Ward’s distance clustering matrices to determine degrees of community concordance and similarity. Fish and macroinvertebrate communities were assessed utilizing Indices of Biotic Integrity (IBI) in order to compare stream ecosystem health as expressed by each index. Adventitious and ordinate macroinvertebrate communities largely clustered in like groups with adventitious tributaries dominated by the crustacean Gammarus sp. and ordinate streams dominated by the trichopteran, Hydropsyche sp. Adventitious communities were strongly influenced by elevated total alkalinity and total suspended solids; ordinate communities by contrast to elevated total organic carbon and specific conductance. Fish communities showed no significant relationship to water quality parameters among either tributary type, but often grouped with their nearest geographic neighbor. The respective indices revealed a discord between the two communities suggesting that neither community serves as a surrogate for the other as an indicator of stream health in this basin. Both communities appeared to be driven by differences in local environmental conditions.     

Microbial communities in northern Adriatic mucilaginous aggregates: insight into the early phase of aggregate formation

Insight into the initial phase of aggregate formation was provided by comparison between bacterial communities from freshly formed aggregates dominated by the epipelic diatom Cylindrotheca closterium and associated water masses. This study was performed from 2000 to 2006 in the northern Adriatic. The chemotaxonomic structures and physiological conditions were inferred from the fatty acid profiles of the cultured bacterial communities of all implicated components, fresh aggregates, their adjacent waters, oligotrophic high-salinity waters and halocline waters. The results showed similarity between bacterial communities of fresh aggregates and oligotrophic high-salinity water, suggesting their common origin and involvement in the formation of aggregates. In contrast, the origin of the water adjacent to aggregates was different from that of the other components but was similar to the halocline layer and was likely derived from northern Adriatic waters. The presence and activity of heterotrophic bacteria belonging to Alteromonadaceae, which are regularly observed on fresh aggregates, suggest that the early phase of aggregate formation corresponds to an abrupt change of environmental conditions due to the mixing of central and northern Adriatic waters. The initial colonisation of fresh mucilage ascribes to Alteromonas an important ecological function in aggregate community development related to the succession of phytoplankton and heterotrophic bacteria.     

Characterization of diatom assemblages in mid-altitude streams of NW Italy

Following the European Water Framework Directive, this study aims to be the first step to (i) identify diatom type assemblages in unpolluted streams in NW Italy, and (ii) find which ecological factors explain most of the variation. To achieve this, we collected physical, chemical and benthic community data from four streams in NW Italy from 2001 to 2004, for a total of 72 samples. All sampling sites were between 200 m a.s.l. and 800 m a.s.l., but differed in the dominant lithological substrate, i.e. alluvial or siliceous. Relationships between diatom communities and environmental factors were examined using canonical correspondence analysis (CCA), while Indicator Species Analysis was used to define characterizing species and accompanying species of three environmental groups identified by CCA: (1) high water quality and medium saline content, (2) high water quality and low saline content, (3) poor water quality. The diatom assemblages of the three groups of sites differed significantly, as shown by the Multi-Response Permutation Procedure. There were strong correlations between diatoms and environmental factors, especially chlorides (also highly correlated with sulphates and carbonate hardness), nitrate concentration and conductivity. The group 1 assemblage was typical of the alluvial Alpine streams with medium saline content and was characterized by mostly oligosaprobic/β-mesosaprobic taxa such as Cymbella affinis, Diatoma ehrenbergii and Staurosira pinnata. The species assemblage found in the siliceous Alpine rivers with good water quality make them suitable reference sites for a benthic diatom community. Electronic Supplementary Material Supplementary material is available for this article at and accessible for authorised users Handling editor: K. Martens     

嘉陵江下游硅藻群落结构及物种多样性研究

于2006 年11 月, 2007 年2 月、5 月和8 月, 分别采集嘉陵江下游8 个采样点藻类样品, 分析其硅藻群落结构及物种多样性, 并利用物种多样性指数及硅藻商等对水质进行了生物学评价。结果表明: (1)共发现89种硅藻, 硅藻细胞密度变幅为0.57×104—4.51×104 ind/L, 总平均2.31×104 ind/L; 多样性指数值变幅为0.72—3.12, 总平均2.20; 均匀度指数值变幅为0.15—0.52, 总平均0.36; 硅藻商变幅为0.66—9.48, 总平均3.24。(2)硅藻群落结构呈现出季节和水平分布上的变化。在季节变化上, 物种丰富度、细胞密度及多样性指数等以温度较低的春(5 月)、秋(11 月)两季最高, 而以夏季(8 月)最低。在水平分布上, 从上游到下游, 硅藻群落结构呈现出物种丰富度、多样性指数值逐渐减小, 而细胞密度和硅藻商逐渐增加的趋势。(3)嘉陵江下游水质总体为β-中污水体。其中位于城市上游的云门、沙溪、温塘峡、井口水质较好, 为微污或β-中污水体, 而位于城区及下游的合川、毛背沱、磁器口和朝天门水质较差, 为α-中污或污染水体。       

The potential effects of energy related activities on the seasonal trajectories of epiphytic marine diatoms

Seasonal successional trajectories of transplanted and experimental diatom communities were studied during the summer of 1973. Manipulation of these diatom assemblages was accomplished through the development of an in situ experimental apparatus capable of incubating these organisms without doing violence to the community itself.In one set of experiments the effects of water quality were tested on the development of inocula from grossly similar but fairly distant locations. In another set the native inoculum was incubated in the continual presence of Fe, Cu, Cr, Pb, Zn and crude oil. Seasonal succession took place in all of the control and experimental communities. During the course of succession the trajectories of assemblages under some conditions converged while others diverged. Since the random fluctuations in the environment were constant for all assemblages, the abundances of individual species were due to niche packing and interspecific restraints on the biotic potential of selected diatom species as well as the changes in water quality. The most diverse community was an experimentally mixed one. The high diversity of this community was probably due to niche packing a phenomenon which restricted the realized niches of many species and hindered their blooming. Paradoxically twice as many species (40%) had their greatest niche breadth in the mixed community as did species in the transplanted (20%) or native controls (17%). Enrichment of the incubation medium with heavy metals and oil altered the community structure and diversity of most experimental vessels. Growth of some species was depressed while that of others was enhanced. The trajectories of the communities enriched with oil and Pb were quite similar throughout the summer. The Cu and Cr assemblages initially followed the trajectory of oil and Pb but later diverged. Greatest species diversity was consistantly found in the community incubated in the presence of Cu. The Fe enriched community generally diverged from all the others. Recurrent group analysis identified distinctive groups of species for each of the experimental assemblages as well as controls.The response of these diatom communities incubated under natural conditions were characteristic of resilient communities in which populations with different structures were quickly established.Supported by ERDA Contract E (11-1) 3254, Reference Number (COO) 3254-28. The authors would like to acknowledge Dr. Howard Rubin for his assistance in writing the many computer programs used in this investigation.This paper represents a revised expansion of a thesis project accepted by the CCNY Biology Faculty in partial fulfillment of the requirements of the M.A. degree in September 1976.     

The roles of environment and space in shaping stream diatom communities

Diatoms are widely used in stream quality assessment due to their response to the local environment. Diatoms are also influenced by many large-scale processes and so the diatom communities of boreal streams incorporate a strong spatial component at a regional level. What is not properly known yet is whether the variation in diatom communities between regions is larger than the variation in measured environmental variables. We studied the roles of environment and space in accounting for variability in stream diatom communities across four regions in Finland. According to canonical correspondence analysis, geographical coordinates, nutrient concentrations (total N and P), and water conductivity were the most important factors affecting variation in diatom community composition. Of physical factors, depth and current velocity were also significant. According to Mantel tests, both environmental and geographical distances were related to dissimilarity in diatom community composition. Analysis of Similarities indicated that the regional differences in diatom community composition were larger than the regional differences in environmental variables. We also found many indicator species confined to certain regions. Our results suggest that the four study regions differ in their diatom species composition more than in their environmental features and that diatoms are structured not only by the local environment but also by large-scale processes, possibly related to history, climate and dispersal. These results imply that, while diatom species composition reflects well the environmental differences between regions, future bioassessments would benefit from regional stratification. Otherwise, relationships with environmental variables may be masked by trans-regional differences in species pools caused by the large-scale processes.     

Morphological and physiological alterations in the diatom Gomphonema pseudoaugur due to heavy metal stress

Periphytic diatom communities were analyzed from several heavy metal contaminated water bodies of Haryana, India. Among the analyzed sites, site HO3 (Saraswati Dham, Kurukshetra, Pehowa) showed significant response in the periphytic diatom community in terms of community shift (dominance of Gomphonema pseudoaugur) and lower biodiversity indices (species richness and Shannon index). Gomphonema pseudoaugur responded more specifically through induction of lipid bodies and occurrence of deformities in diatom frustules. PCA analysis showed that site HO3 is contaminated with heavy metals, especially Pb and Se. Pearson's correlation analysis showed a positive and statistically strong relationship between induction of lipid bodies and deformities with heavy metals (Pb and Se). Finally, from the present study, we concluded that heavy metal stress induces increased lipid body (LBs) size and deformities in the diatom species Gomphonema pseudoaugur, which could be a valuable indicator species for biomonitoring and a consideration in biofuel production.