Gulls (Laridae) as frugivores and seed dispersers

Many gull species (Laridae) are opportunistic feeders with diverse diets. Seeds and fruits are common in gull diets, often in small proportions but sometimes dominant in certain periods and areas. Moreover, the large body sizes and high population densities of gulls increase their ecological importance. Hence, they can be significant seed dispersers even with relatively few seeds in diets. Gulls are highly mobile and have long gut-retention times, thus may provide long-distance dispersal for plants. Most information of the potential role of gulls as seed dispersers is from dietary studies, not focused on plant–animal interactions, thus the role of gulls on plant population dynamics is little known. Nevertheless, gulls have been shown to be effective dispersers of some coastal plants, and vectors for plant movement to and between islands. Here, I review this topic and hope to stimulate more research into the role of gulls as seed dispersers, particularly in coastal and island habitats.     

Structural conservation and variation in the mitochondrial control region of fringilline finches (Fringilla spp.) and the greenfinch (Carduelis chloris)

We sequenced the entire control region and portions of flanking genes (tRNA(Phe), tRNA(Glu), and ND6) in the common chaffinch (Fringilla coelebs), blue chaffinch (F. teydea), brambling (F. montifringilla), and greenfinch (Carduelis chloris). In these finches the control region is similar in length (1,223-1,237 bp) and has the same flanking gene order as in other birds, and contains a putative TAS element and the highly conserved CSB-1 and F, D, and C boxes recognizable in most vertebrates. Cloverleaf-like structures associated with the TAS element at the 5' end and CSB-1 at the 3' end of the control region may be involved with the stop and start of D-loop synthesis, respectively. The pattern of nucleotide and substitution bias is similar to that in other vertebrates, and consequently the finch control region can be subdivided into a central, conserved G-rich domain (domain II) flanked by hypervariable 5'-C-rich (domain I) and 3'-AT-rich (domain III) segments. In pairwise comparisons among finch species, the central domain has unusually low transition/transversion ratios, which suggests that increased G + T content is a functional constraint, possibly for DNA primase efficiency. In finches the relative rates of evolution vary among domains according to a ratio of 4.2 (domain III) to 2.2 (domain I) to 1 (domain II), and extensively among sites within domains I and II. Domain I and III sequences are extremely useful in recovering intraspecific phylogeographic splits between populations in Africa and Europe, Madeira, and a basal lineage in Nefza, Tunisia. Domain II sequences are highly conserved, and are therefore only useful in conjunction with sequences from domains I and III in phylogenetic studies of closely related species.      

Evolution of ultraviolet vision in shorebirds (Charadriiformes)

Diurnal birds belong to one of two classes of colour vision. These are distinguished by the maximum absorbance wavelengths of the SWS1 visual pigment sensitive to violet (VS) and ultraviolet (UVS). Shifts between the classes have been rare events during avian evolution. Gulls (Laridae) are the only shorebirds (Charadriiformes) previously reported to have the UVS type of opsin, but too few species have been sampled to infer that gulls are unique among shorebirds or that Laridae is monomorphic for this trait. We have sequenced the SWS1 opsin gene in a broader sample of species. We confirm that cysteine in the key amino acid position 90, characteristic of the UVS class, has been conserved throughout gull evolution but also that the terns Anous minutus, A. tenuirostris and Gygis alba, and the skimmer Rynchops niger carry this trait. Terns, excluding Anous and Gygis, share the VS conferring serine in position 90 with other shorebirds but it is translated from a codon more similar to that found in UVS shorebirds. The most parsimonious interpretation of these findings, based on a molecular gene tree, is a single VS to UVS shift and a subsequent reversal in one lineage.     

Development of new nuclear markers and characterization of single nucleotide polymorphisms in kelp gull (Larus dominicanus)

The present study seeks to develop nuclear markers for the kelp gull (Larus dominicanus). We hereby report the characterization of 12 independent nuclear introns, where 104 single nucleotide polymorphisms (SNPs) in 8138 sequenced base pairs were observed. These SNP markers are the first to be designed for genotyping a gull species. The markers will provide useful tools for understanding which processes act or acted upon kelp gulls to cause their low genetic variability in mitochondrial DNA. In addition, these markers open a new opportunity for population genetic and evolutionary studies in the Laridae group.     

Molecular phylogeny and plumage evolution in gulls (Larini)

We used DNA sequence data of the mitochondrial control region and cytochrome b gene to assess phylogenetic relationships among 32 gull species and two outgroup representatives. We tentatively estimated divergence times from transversional substitutions calibrated against DNA–DNA hybridization data. Several strongly supported species groups are identified, but the relationships between these species groups and the rooting of the gull tree remain unresolved. Geographical range extension appears as a factor of speciation, but several related, well‐differentiated species seem to have evolved within comparatively restricted areas. Some plumage characters used in the past for delimiting species groups appear inappropriate. The dark hooded species, for instance, do not constitute a natural assemblage. Molecular data also allowed the identification of several striking plumage convergences that had obscured the true relationships between gull species until now. For example, the dark tropical gulls analysed here each belong to totally different clades and are independent examples of convergent plumage evolution under common environmental constraints. The reverse situation also happened, with two arctic‐distributed species, the ivory gull (Pagophila eburnea) and the Sabine’s gull (Xema sabini), appearing as sister taxa despite completely different plumage features. Molecular data have thus significantly improved our understanding of gull evolution.     

Geographical variation in the yellow‐legged gull: introgression or convergence from the herring gull?

Yellow-legged gulls Larus michahellis from the Atlantic Iberian coast exhibit some phenotypic similarities with the herring gull L. argentatus from Western Europe. To assess this phenomenon and its possible origin, we compared Mediterranean yellow-legged gulls, Atlantic Iberian yellow-legged gulls and herring gulls for several phenotypic traits (morphology, plumage), and used genetic data to determine the evolutionary history of the Atlantic Iberian yellow-legged gulls. Data from mitochondrial cytochrome b gene and microsatellite loci clearly indicate that Atlantic Iberian gulls are closely related to Mediterranean yellow-legged gulls, and do not show stronger signs of introgression with herring gulls relative to other populations of yellow-legged gulls. Atlantic Iberian yellow-legged gulls are more similar to herring gulls in body size and shape than to other yellow-legged gulls populations, but not in mantle colour and wing-tip pattern. Body size and other phenotypic and life history similarities with the herring gull ( L. argentatus argenteus ) such as voice, winter plumage and breeding phenology, previously described in several studies, might thus be interpreted as convergent characters. Within the yellow-legged gull, the high F _st-values obtained from four nuclear microsatellite loci indicate substantial population structure and reduced levels of gene flow between gull populations in Mediterranean France and Atlantic Iberia. Differences among these populations in breeding phenology and migration patterns, likely resulting from different local selection pressures, might contribute to this low level of gene flow.     

Contrasting patterns of wetland use by sympatric larids in winter

The population dynamics and behaviour of the larid assemblage of a Mediterranean coastal wetland, the Vourkari inlet in Greece, were studied during the winter of 2008–2009. More black-headed gulls (Larus ridibundus) were seen in the inlet in December, more Mediterranean gulls (Larus melanocephalus) were present from mid-January to mid-February, while little variation was observed in yellow-legged gull (Larus michahellis) numbers throughout winter. Bird numbers remained stable through the day for the yellow-legged gull, but fewer black-headed and Mediterranean gulls were present in the late morning than the other periods. Diurnal activity patterns showed that feeding was the primary behaviour for yellow-legged gulls and resting and sleeping for black-headed and Mediterranean gulls, with locomotion being equally important for all species. All larids were primarily feeding in the late morning period, but yellow-legged gulls were doing so in much higher proportions. These contrasting patterns suggested that the Vourkari inlet was more important as a day roost for black-headed and Mediterranean gulls and a preferred feeding ground for yellow-legged gulls. Furthermore, results suggested that resting and sleeping were interchangeable activities and all other activities had more or less the same time demands on a daily basis, and also a consistent pattern across species in sleeping proportions that might indicate cross-species synchrony in sleep patterns; however future research is needed to resolve these issues. This study provided important new information on the winter ecology of three larids and revealed patterns of wetland use by these species that could help assess the importance of certain areas and improve coastal habitat management strategies to benefit birds.     

Seasonal and annual differences in the foraging ecology of two gull species breeding in sympatry and their use of fishery discards

Niche segregation between similar species will result from an avoidance of competition but also from environmental variability, including nowadays anthropogenic activities. Gulls are among the seabirds with greater behavioural plasticity, being highly opportunistic and feeding on a wide range of prey, mostly from anthropogenic origin. Here, we analysed blood and feather stable isotopes combined with pellet analysis to investigate niche partitioning between Audouin's gull Larus audouinii and yellow‐legged gull Larus michahellis breeding in sympatry at Deserta Island, southern Portugal, during 2014 and 2015. During the breeding season there was considerable overlap in the adults’ diet, as their stable isotope values of blood and primary feather (P1) did not differ, and their pellets were comprised mainly by marine fish species. However, Audouin's gulls presented higher occurrences of pelagic fish, while yellow‐legged gulls fed more on demersal fish, insects, and refuse. SIAR mixing models also estimated a higher proportion of demersal fish in the diet of yellow‐legged gulls. We also found differences between the two gull species in chicks’ feathers, suggesting that Audouin's gull adults selected prey with lower carbon isotope values to feed their young. Secondary feather (S8) of Audouin's gull presented higher isotope values compared to yellow‐legged gulls, indicating different foraging areas (δ¹³C) and/ or trophic levels (δ¹⁵N) between the two species in the non‐breeding season. During both the all‐year and non‐breeding periods the yellow‐legged gull showed a broader isotopic niche width than Audouin's gull in 2013, and in 2014 the two gull species exhibited different isotopic niche spaces. Our study suggests that both gull species foraged in association with fisheries during the breeding season. In this sense, a discard ban implemented under the new European Union Common Fisheries Policy may lead to a food shortage, therefore future research should closely monitor the population dynamics of Audouin's and yellow‐legged gulls.     

Phylogeography and recent emergence of the Old World screwworm fly, Chrysomya bezziana, based on mitochondrial and nuclear gene sequences

Abstract.  A previous study had identified an African and an Asian race of the Old World screwworm fly, Chrysomya bezziana Villeneuve (Diptera: Calliphoridae), based on the 3' terminal 279 basepairs (bp) of the mitochondrial cytochrome b gene. The current study improved the phylogeographic resolution of cytochrome b for this species by characterizing more of the gene (the 3' terminal 715 bp) and by sampling more geographical populations, including Oman, Iran, Hong Kong and the Indonesian islands of Sulawesi and East Sumba. Strong support was found for recognizing an African race, but not for a monophyletic Asian race. The cladistic and genealogical relationships among the Asian populations were complex. There was sufficient genetic homogeneity throughout separate regions (mainland Asia and each Indonesian island) to suggest that there are no reproductive barriers within each region that might necessitate the production of more than one strain for control by the sterile insect technique (SIT). Primers were designed for the amplification by polymerase chain reaction of two nuclear loci, the highly conserved elongation factor-1α gene and the less conserved white gene, and the preliminary results indicated that these genes showed the same pattern of small-scale regional variation as cytochrome b . The cytochrome b haplotypes are useful markers for identifying the geographical origins of any emerging infestations of the species: the absence of Indonesian and African haplotypes in the Middle East demonstrates that the large-scale transport of livestock is not spreading Old World screwworm.     

Phylogenetic relationships within the Laridae (Charadriiformes: Aves) inferred from mitochondrial markers

Gulls (Aves: Laridae) constitute a recent and cosmopolite family of well-studied seabirds for which a robust phylogeny is needed to perform comparative and biogeographical analyses. The present study, the first molecular phylogeny of all Larids species (N=53), is based on a combined segment of mtDNA (partial cytochrome b and control region). We discuss our phylogenetic tree in the light of previous suggestions based on morphological, behavioral, and plumage characters. Although the phylogeny is not fully resolved, it highlights several robust species groups and confirms or identifies for the first time some sister relationships that had never been suggested before. The Dolphin Gull (Leucophaeus scoresbii) for instance, is identified as the sister species of the Grey Gull (Larus modestus) and the Ross's Gull (Rhodostethia rosea) forms a monophyletic group with the Little Gull (Larus minutus). Our results clearly demonstrate that the genus Larus as currently defined is not monophyletic, since current taxonomy of gulls is based on the use of convergent phenotypic characters. We propose a new systematic arrangement that better reflects their evolutionary history.     

Changes in the species composition and number of gulls in tundra colonies in the western Chukotka over the last 40 years

Long-term data reflecting the abundance and species composition of large colonies of gulls (more than five nests, distance between the nests less than 50 m) on Aiopechan Island, West Chukotka, were compared. A comparative analysis of the data published in 1970–1984 and our data for 1989, 2000–2013 revealed significant changes in the composition and abundance of colonies over the 40-year period with simultaneous shift in the spring phonological characteristics to earlier dates. Growth in the number of the Vega gull (Larus vegae) and decrease in the number of Sabine’s gull (Xema sabini) were revealed. The number of glaucous gulls (Larus hyperboreus) was stable. A change of the dominant species in the colonies and disappearance of some colonies of the Sabine’s gull under the influence of the expansion of the Vega gull were registered. It was found that the increase in the abundance of the Vega gull occurs not owing to the increase of long-term colonies but due to the appearance of new ones.     

Sequences of six genes and several open reading frames in the kinetoplast maxicircle DNA of Leishmania tarentolae

The DNA sequence of approximately 80% of the transcribed region of the kinetoplast maxicircle DNA of Leishmania tarentolae was obtained, and structural genes were localized by comparison of the translated amino acid sequences with those of known mitochondrial genes from other organisms. By this method, the genes for cytochrome oxidase subunits I, II, and III, cytochrome b, and human mitochondrial unidentified reading frames 4 and 5 were identified. By comparing the amino acid sequences of the putative L. tarentolae genes with those of known genes, we conclude that TGA codes for tryptophan, as in most other mitochondrial systems. This is the only apparent change from the universal genetic code. The six identified structural genes show various degrees of divergence from the homologous genes in other species, with cytochrome oxidase subunit I being the most conserved and cytochrome oxidase subunit III being the least conserved. A comparison of the cytochrome b genes from L. tarentolae and Trypanosoma brucei showed that the ratio of transversions to transitions is 1:1, suggesting that these species diverged from each other more than 80 X 10(6) years ago. Several as yet unidentified open reading frames were also present in the maxicircle sequence. These data confirm that maxicircle DNA has a coding potential which typifies other mitochondrial systems.     

Differential expression, induction, and stability of CYP1A4 and CYP1A5 mRNA in chicken and herring gull embryo hepatocytes

2,3,7,8-Tetrachlorodibenzo-p-dioxin (TCDD) induces cytochrome P4501A (CYP1A) catalyzed ethoxyresorufin-O-deethylase (EROD) activity in chickens and other avian species. To investigate mechanisms underlying the effectiveness of EROD activity as a biomarker for exposure to dioxin-like compounds in avian models, we characterized inter-species differences in isoform-specific CYP1A mRNA expression, induction, and stability in chickens (Gallus gallus domesticus) and herring gulls (Larus argentatus). Exposure to 100 nM TCDD significantly increased CYP1A4 and CYP1A5 mRNA expression in chicken and herring gull embryo hepatocyte cultures. Chicken CYP1A4 and CYP1A5 were induced 61-fold and 25-fold respectively. The herring gull isoforms were induced 2.2- and 4.3-fold respectively. In both species, the isoform that was preferentially induced exhibited lower constitutive expression. Half-lives of chicken CYP1A4, chicken CYP1A5, and herring gull CYP1A5 mRNA ranged from 5.0 to 7.0 h in cultured hepatocytes. The half-life of herring gull CYP1A4 mRNA was 2.5 h. Our findings indicate that expression, induction, and stability of CYP1A4 and CYP1A5 mRNA are differentially regulated in chickens and herring gulls. In particular, CYP1A4 is preferentially induced in chickens, while CYP1A5 is preferentially induced in herring gulls. We propose that CYP1A5 mRNA expression may be a sensitive biomarker of exposure to dioxin-like compounds in some avian species.     

The herring gull complex is not a ring species

Under what circumstances speciation in sexually reproducing animals can occur without geographical disjunction is still controversial. According to the ring-species model, a reproductive barrier may arise through 'isolation by distance' when peripheral populations of a species meet after expanding around some uninhabitable barrier. The classical example of this kind of speciation is the herring gull (Larus argentatus) complex, with a circumpolar distribution in the Northern Hemisphere. Based on mitochondrial DNA variation among 21 gull taxa, we show that members of this complex differentiated largely in allopatry following multiple vicariance and long-distance-colonization events, not primarily through isolation by distance. Reproductive isolation evolved more rapidly between some lineages than between others, irrespective of their genetic distance. Extant taxa are the result of divergent as well as reticulate evolution between two ancestral lineages originally separated in a North Atlantic refugium and a continental Eurasian refugium, respectively. Continental birds expanded along the entire north Eurasian coast and via Beringia into North America. Contrary to the ring-species model, we find no genetic evidence for a closure of the circumpolar ring through colonization of Europe by North American herring gulls. However, closure of the ring in the opposite direction may be imminent, with lesser black-backed gulls about to colonize North America.     

Characterization and locus-specific typing of MHC class I genes in the red-billed gull (<Emphasis Type="BoldItalic">Larus scopulinus</Emphasis>) provides evidence for major,minor, and nonclassical loci

A major challenge facing studies of major histocompatibility complex (MHC) evolution in birds is the difficulty in genotyping alleles at individual loci, and the consequent inability to investigate sequence variation and selection pressures for each gene. In this study, four MHC class I loci were isolated from the red-billed gull (Larus scopulinus), representing both the first characterized MHCI genes within Charadriiformes (shorebirds, gulls, and allies) and the first full-length MHCI sequences described outside Galloanserae (gamebirds + waterfowl). Complete multilocus genotypes were obtained for 470 individuals using a combination of reference-strand conformation analysis and direct sequencing of gene-specific amplification products, and variation of peptide-binding region (PBR) exons was surveyed for all loci. Each gene is transcribed and has conserved sequence features characteristic of antigen-presenting MHCI molecules. However, higher allelic variation, a more even allele frequency distribution, and evidence of positive selection acting on a larger number of PBR residues suggest that only one locus (Lasc-UAA) functions as a major classical MHCI gene. Lasc-UBA, with more limited variation and PBR motifs that encompass a subset of Lasc-UAA diversity, was assigned a putative minor classical function, whereas the divergent and largely invariant binding-groove motifs of Lasc-UCA and -UDA are suggestive of nonclassical loci with specialized ligand-binding roles.     

Evolution of large subunit rRNA structure. The 3' terminal domain contains elements of secondary structure specific to major phylogenetic groups

Refined secondary structure models supported by phylogenetic evidence have been derived for the 3' terminal domain of large subunit rRNA (the region that exists as a separate 4.5 S molecular entity in chloroplast ribosomes) through a comparative analysis of all the pro- and eukaryotic sequences at present available. While several universally conserved features of secondary structure are found, a few diversified structural elements are also detected which are specific to one of the primary kingdoms, eubacteria, archaebacteria, or eukaryotes. Remarkably, some appear to be selectively preserved during the evolution of the primary kindgom, suggesting they represent functionally important structures. Thus, although the role of this 3' terminal domain in ribosomal function still remains unknown, its mode of sequence variation clearly points to a significant diversification of its function among the primary kindgoms.     

Continued use of soft‐metal bands on gulls in North America reduces the value of recovery data

Use of soft‐metal (aluminum alloy) bands on gulls (Laridae) is known to result in high rates of band loss and, as a result, hard‐metal (monel, incoloy, or stainless steel) bands are superior for most studies. However, the U.S. Bird Banding Laboratory (BBL) and the Canadian Wildlife Service Bird Banding Office continue to issue soft bands for use on gulls, and the BBL does not make specific recommendations about use of hard bands so many banders continue to use soft bands. For wholly marine species of gulls banded in North America since 1996, ～20% have been banded with soft bands; the proportion of soft bands used on partially freshwater gulls was ～70% up to 2009, but has since fallen to 40%. Using hierarchical Bayesian models in program MARK, we analyzed recovery data for three gull species and found that estimates of annual survival rates derived from soft bands (0.68–0.81) were lower than those derived from hard bands (0.85–0.96). Comparison of survival rates of Herring Gulls (Larus argentatus) in the Great Lakes basin and on the Atlantic coast provided no evidence that soft bands last longer in freshwater than saltwater. Band loss compromises many types of studies, including those assessing the possible effects of climate change. We recommend that use of soft bands on gulls be discontinued, and that banders be required to use hard bands on these species in the future. The same consideration applies to other long‐lived species, including some waterfowl and all albatrosses, pelicans, cormorants, shearwaters, petrels, terns, shorebirds, and alcids. Use of hard bands should be based on expectations about a species’ longevity and evidence of band wear, rather than on whether or not it occurs in saltwater.