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1.
In forests with gap disturbance regimes, pioneer tree regeneration is typically abundant following stand-replacing disturbances, whether natural or anthropogenic. Differences in pioneer tree density linked to disturbance regime can influence pollinator behaviour and impact on mating patterns and genetic diversity of pioneer populations. Such mating pattern shifts can manifest as higher selfing rates and lower pollen diversity in old growth forest populations. In secondary forest, where more closely related pollen donors occur, an increase in biparental inbreeding is a potential problem. Here, we investigate the consequences of secondary forest colonisation on the mating patterns and genetic diversity of open-pollinated progeny arrays for the long-lived, self-compatible pioneer tree, Vochysia ferruginea, at two Costa Rican sites. Five microsatellite loci were screened across adult and seed cohorts from old growth forest with lower density, secondary forest with higher density, and isolated individual trees in pasture. Progeny from both old growth and secondary forest contexts were predominantly outcrossed (tm=1.00) and experienced low levels of biparental inbreeding (tm−ts=0.00–0.04). In contrast to predictions, our results indicated that the mating patterns of V. ferruginea are relatively robust to density differences between old growth and secondary forest stands. In addition, we observed that pollen-mediated gene flow possibly maintained the genetic diversity of open-pollinated progeny arrays in stands of secondary forest adults. As part of a natural resource management strategy, we suggest that primary forest remnants should be prioritised for conservation to promote restoration of genetic diversity during forest regeneration.  相似文献   

2.
Assessing the population genetic structure of threatened species is important for developing successful conservation strategies. In this study, we evaluated the fine-scale spatial genetic structure (SGS) of Dalbergia nigra from a regenerating secondary forest fragment and compared it with previous data from a primary forest of a large reserve. A total of 107 adult and 111 saplings were mapped and genotyped for seven microsatellite loci. The genetic diversity was high and similar in adults (H e?=?0.682) and saplings (H e?=?0.680). The spatial extent of SGS was higher in adults than in saplings. Overlapping generations in the potentially reproductive individuals is the likely explanation for the higher SGS in adults (Sp?=?0.016) in relation to the saplings (Sp?=?0.010). The SGS in the adults from the secondary forest fragment was similar to that found in the primary forest. Considering the SGS found in adults, from both the secondary and primary forests, seeds for ex situ conservation should be collected from trees at least 80 m apart to reduce the genetic similarity between samples. These results highlight the importance of preserving small forest fragments to allow successful regeneration and maintenance of the genetic diversity in D. nigra.  相似文献   

3.
Relatively little information exists on neotropical secondary rain forests that have progressed beyond the pioneer stages of succession, or on the potential of natural regeneration to restore forest on large areas. We determined the structural and floristic characteristics (10 cm dbh) of a 30‐year‐old secondary forest developing on a 32.5 ha pasture on hilly terrain, abandoned after use of moderate intensity. Ten 0.24 ha sample plots covered the range of site conditions. The forest was dominated by long‐lived pioneer tree species; overall, the majority of species (70%) was vertebrate dispersed but the majority of individuals (52%) was of wind‐dispersed species. Tree species, including the dominants, were a mixture of those present in old‐growth and adventives colonizing from agricultural land. The forest was very heterogeneous. Vochysia ferruginea‐dominated stands characterized slopes with soils of high exchangeable acidity, while the adventive Cordia alliodora dominated sites with gentler topography and soils of lower acidity. Structural differences between the two forest types were slight, but Cordia forest had significantly greater species diversity and absolute and relative abundances of vertebrate‐dispersed tree species than Vochysia forest, which had significantly greater absolute and relative abundances of wind‐dispersed tree species. These latter differences between forest types, as well as the wide structural variation of the forest as a whole, were probably largely due to spatial and temporal variation in seed rains, some of it linked to the characteristics of the dominant species. Rain forest restoration on large pastures may depend greatly on wind dispersal and adventive tree species, and techniques for silvicultural diagnosis must be developed as a basis for the management of heterogeneous successional stands. Studies of early colonization of pastures should be expanded to focus on the causes of heterogeneity in older forests.  相似文献   

4.
1. We investigated the Pleistocene and Holocene history of the rare mayfly Ameletus inopinatus EATON 1887 (Ephemeroptera: Siphlonuridae) in Europe. We used A. inopinatus as a model species to explore the phylogeography of montane, cold‐tolerant aquatic insects with arctic–alpine distributions. 2. Using species distribution models, we developed hypotheses about the species demographic history in Central Europe and the recolonisation history of Fennoscandia. We tested these hypotheses using mitochondrial cytochrome oxidase I (mtCOI) sequence data and compared our genetic results with previously generated microsatellite data to explore genetic diversity distributions of A. inopinatus. 3. We observed old lineages, deep splits and almost complete lineage sorting of mtCOI sequences among mountain ranges. These results support a periglacial survival, i.e. persistence at the periphery of Pleistocene glaciers in Central Europe. 4. There was strong differentiation between the Fennoscandian and all other populations, indicating that Fennoscandia was recolonised from a refugium not accounted for in our sampling. High degrees of population genetic structure within the northern samples suggest that Fennoscandia was recolonised by more than one lineage. However, this structure was not apparent in previously published microsatellite data, consistent with secondary contact without sexual incompatibility or with sex‐biased dispersal. 5. Our demographic analyses indicate that (i) the separation of northern and Central European lineages occurred during the early Pleistocene; (ii) Central European populations have persisted independently throughout the Pleistocene and (iii) the species extended its range about 150 000 years ago.  相似文献   

5.
The recovery of genetic variation in newly recolonized populations is an important concern in forest conservation genetics. We examined the potential recovery of genetic diversity and changes to genetic structure in populations of the wind‐pollinated species Tsuga canadensis that naturally regenerated following the extensive 19th century regional forest clearance for agriculture in west‐central Massachusetts. We genotyped 264 individuals across six microsatellite loci and compared levels and patterns of genetic variation between primary forests (forests that were logged but never cleared) and secondary forests (stands that were recolonized following agricultural abandonment). We found no significant reductions in genetic diversity in secondary forests (AR = 5.450; HS = 0.718) compared to primary forests (AR = 5.742; HS = 0.730). Moreover, the population genetic differentiation was also not significantly reduced in secondary compared to primary forests, with no significant genetic structure observed among all populations. These results suggest rapid genetic recovery of T. canadensis populations in recolonized forests compared with other late‐successional temperate tree species.  相似文献   

6.
Separating the components of soil respiration and understanding the roles of abiotic factors at a temporal scale among different forest types are critical issues in forest ecosystem carbon cycling. This study quantified the proportions of autotrophic (RA) and heterotrophic (RH) in total soil (RT) respiration using trenching and litter removal. Field studies were conducted in two typical subtropical forest stands (broadleaf and needle leaf mixed forest; bamboo forest) at Jinyun Mountain, near the Three Georges Reservoir in southwest China, during the growing season (Apr.–Sep.) from 2010 to 2012. The effects of air temperature (AT), soil temperature (ST) and soil moisture (SM) at 6cm depth, solar radiation (SR), pH on components of soil respiration were analyzed. Results show that: 1) SR, AT, and ST exhibited a similar temporal trend. The observed abiotic factors showed slight interannual variability for the two forest stands. 2) The contributions of RH and RA to RT for broadleaf and needle leaf mixed forest were 73.25% and 26.75%, respectively, while those for bamboo forest were 89.02% and 10.98%, respectively; soil respiration peaked from June to July. In both stands, CO2 released from the decomposition of soil organic matter (SOM), the strongest contributor to RT, accounted for over 63% of RH. 3) AT and ST were significantly positively correlated with RT and its components (p<0.05), and were major factors affecting soil respiration. 4) Components of soil respiration were significantly different between two forest stands (p<0.05), indicating that vegetation types played a role in soil respiration and its components.  相似文献   

7.
Despite recurrent episodes of range expansion and contraction, forest trees often harbour high genetic diversity. Studies of temperate forest trees suggest that prolonged juvenile phase and high pollen flow are the main factors limiting founder effects. Here, we studied the local colonization process of a pioneer rainforest tree in central Africa, Aucoumea klaineana. We identified 87% of parents among trees up to 20-25 years old and could thus compare direct parentage structure data with classical population genetics estimators. In this species, genetic diversity was maintained during colonization. The absence of founder effects was explained by (i) local random mating and (ii) local recruitment, as we showed that 75% of the trees in the close neighbourhood participated in the recruitment of new saplings. Long-distance pollen flow contributed little to genetic diversity: pollen and seed dispersal was mainly within stand (128 and 118 m, respectively). Spatial genetic structure was explained by aggregated seed dispersal rather than by mother-offspring proximity as assumed in classical isolation-by-distance models. Hence, A. klaineana presents a genetic diversity pattern typical of forest trees but does not follow the classical rules by which this diversity is generally achieved. We suggest that while high local genetic variability is of general importance to forest tree survival, the proximate mechanisms by which it is achieved may follow very different scenarios.  相似文献   

8.
Coarse woody debris (CWD) is an important component of the forest carbon cycle, acting as a carbon pool and a source of CO2 in temperate forest ecosystems. We used a soda-lime closed-chamber method to measure CO2 efflux from downed CWD (diameter ≥5 cm) and to examine CWD respiration (R CWD) under field conditions over 1 year in a temperate secondary pioneer forest in Takayama forest. We also investigated tree mortality (input to the CWD pool) from the data obtained from the annual tree census, which commenced in 2000. We developed an exponential function of temperature to predict R CWD in each decay class (R 2 = 0.81–0.97). The sensitivity of R CWD to changing temperature, expressed as Q 10, ranged from 2.12 to 2.92 and was relatively high in decay class III. Annual C flux from CWD (F CWD) was extrapolated using continuous air temperature measurements and CWD necromass pools in the three decay classes. F CWD was 3.0 (class I), 17.8 (class II), and 13.7 g C m?2 year?1 (class III) and totaled 34 g C m?2 year?1 in 2009. Annual input to CWD averaged 77 g C m?2 year?1 from 2000 to 2009. The budget of the CWD pool in the Takayama forest, including tree mortality inputs and respiratory outputs, was 0.43 Mg C ha?1 year?1 (net C sink) owing to high tree mortality in the mature pioneer forest. The potential CWD sink is important for the carbon cycle in temperate successional forests.  相似文献   

9.
Tricyrtis ishiiana is a relic endemic plant taxon of the Convallariaceae that inhabits two nearby gorges in Kanagawa Prefecture, Japan. The distribution range and number of populations are thought to have been reduced to the present refugial populations during the Quaternary climatic oscillations. Because of its showy flowers, this plant has faced illegal removal from its natural habitats for horticultural use and has been designated a critically endangered species (class IA). In this study, we analyzed the genetic structure of the relict populations of T. ishiiana in order to contribute to the conservation strategies of the prefectural government. Our analyses of nine nuclear microsatellite loci detected high genetic diversity (H E = 0.704 and H O = 0.541) for the two populations. The two populations were slightly differentiated (R ST = 0.032), accompanied by faint substructure across the populations (K = 3). In addition, each population exhibited spatial genetic structuring. The relatively low inbreeding coefficient for both populations together (F IS = 0.233) and each population separately (F IS = 0.217?C0.246) may be attributable to crossing among descendants within a population along with occasional gene flow between the populations. These results suggested that the extant populations have not experienced a severe bottleneck. The two extant populations were genetically differentiated at a very low level, accompanied by occasional pollen flow via pollinators and/or seed dispersal by gravity in the mountainous environment. Occasional gene exchange between the populations has allowed T. ishiiana to harbor high genetic diversity despite being a relic plant confined to two small refugial populations.  相似文献   

10.
Betula humilis is an endangered plant species in Central Europe. In order to protect this species, it is necessary to document its genetic diversity in this region and to identify areas for conservation prioritisation. As molecular investigations conducted throughout the ranges of many plant species have shown that the highest genetic diversities are found within former glacial refugia and/or within the contact zones of different phylogenetic lineages, we investigated the reasons underlying the considerable genetic variation of B. humilis in northeastern Poland revealed previously using nuclear microsatellites. We analysed 365 individuals of B. humilis from 19 populations and 67 specimens of Betula pendula and Betula pubescens sampled in four geographical regions in Poland and Belarus for polymorphism in chloroplast PCR-restriction fragment length polymorphism markers. Genetic data strongly suggested that B. humilis could have survived the Last Glacial Maximum at higher latitudes, but the hypothesis of a refugium in southeastern Poland was rejected. Chloroplast DNA analysis confirmed high genetic diversity in some populations in northeastern Poland. This phenomenon can likely be explained in terms of a suture zone, as the high haplotypic richness was followed by h T????v T. Similar patterns of haplotype distributions in the birches under study and high introgression ratio (IG?=?0.71) among B. humilis and congeneric trees suggested that postglacial recolonisation of the shrub birch was complicated by haplotype sharing with other birches.  相似文献   

11.
Genetic diversity and temperature increases associated with global climate change are known to independently influence population growth and extinction risk. Whether increasing temperature may influence the effect of genetic diversity on population growth, however, is not known. We address this issue in the model protist system Tetrahymena thermophila. We test the hypothesis that at temperatures closer to the species’ thermal optimum (i.e., the temperature at which population growth is maximal, or T opt), genetic diversity should have a weaker effect on population growth compared to temperatures away from the thermal optimum. To do so, we grew populations of T. thermophila with varying levels of genetic diversity at increasingly warmer temperatures and quantified their intrinsic population growth rate, r. We found that genetic diversity increases population growth at cooler temperatures, but that as temperature increases, this effect weakens. We also show that a combination of changes in the amount of expressed genetic diversity (G) in r, plastic changes in population growth across temperatures (E), and strong G × E interactions underlie this temperature effect. Our results uncover important but largely overlooked temperature effects that have implications for the management of small populations with depauperate genetic stocks in an increasingly warming world.  相似文献   

12.
The central aim of this paper is to clarify the picture of postglacial recolonisation and the reconstruction of refugia of Populus alba (L.) and Populus tremula (L.) in the light of hybridisation of the two species. We focussed our study on Central and Southeastern Europe including reference samples from Spain, Sweden and Northern Africa.We investigated 414 individuals of 26 populations using restriction fragment length polymorphisms (PCR-RFLPs) in six maternally inherited chloroplast markers. Altogether, 57 haplotypes were analysed of which four indicated hybridisation events in the past. Phylogeographic structure was found for P. alba with low diversity in Eastern Europe versus high diversity in Italy and Central Europe. A lack of phylogeographic structure was assessed for P. tremula as expected for a boreal forest tree, and diversity was evenly distributed in the studied populations. Two main refugia were identified for P. alba in Italy and Romania. A previously described hybrid zone between species in Central Europe turned out also to be a zone of contact between southern and eastern chloroplast lineages in P. alba. In contrast, P. tremula recolonised its present habitats in Central Europe from several refugia near the former ice cap. We assume separate disconnected refugia for P. alba and P. tremula and suggest an immigration scenario involving the mixing of colonisation routes and interspecific introgression to be responsible for the observed patterns.  相似文献   

13.
Microsatellite loci are widely used for investigating patterns of genetic variation within and among populations. Those patterns are in turn determined by population sizes, migration rates, and mutation rates. We provide exact expressions for the first two moments of the allele frequency distribution in a stochastic model appropriate for studying microsatellite evolution with migration, mutation, and drift under the assumption that the range of allele sizes is bounded. Using these results, we study the behavior of several measures related to Wright’s FST, including Slatkin’s RST. Our analytical approximations for FST and RST show that familiar relationships between Nem and FST or RST hold when the migration and mutation rates are small. Using the exact expressions for FST and RST, our numerical results show that, when the migration and mutation rates are large, these relationships no longer hold. Our numerical results also show that the diversity measures most closely related to FST depend on mutation rates, mutational models (stepwise versus two-phase), migration rates, and population sizes. Surprisingly, RST is relatively insensitive to the mutation rates and mutational models. The differing behaviors of RST and FST suggest that properties of the among-population distribution of allele frequencies may allow the roles of mutation and migration in producing patterns of diversity to be distinguished, a topic of continuing investigation.  相似文献   

14.
15.
Information on genetic variation and its distribution in tropical plant populations relies mainly on studies of ground‐rooted species, while genetic information of epiphytic plants is still limited. Particularly, the effect of forest successional condition on genetic diversity and structure of epiphytes is scanty in the literature. We evaluated the genetic variation and spatial genetic structure of the epiphytic bromeliad Guzmania monostachia (Bromeliaceae, Tillandsioideae) in montane secondary forest patches in Costa Rica. The sampling design included plants on the same trees (i.e., populations), populations within forest patches and patches within secondary forest at two different successional stages (early vs. mid‐succession). Six microsatellites revealed low levels of population genetic variation (A = 2.06, AE = 1.61, HE = 0.348), a marked deficiency of heterozygotes (HO = 0.031) and high inbreeding (f = 0.908). Genetic differentiation was negligible among populations within the same forest patch, but moderate (GST = 0.123 ± 0.043) among forest patches. Genetic relatedness between individuals was significantly higher for plants located within the same forest patch and separated by <60 m and decreased as distance between plants increased, becoming significantly negative at distances >400 m. An analysis of molecular variance (AMOVA) showed significant genetic variation between forest patches, but non‐significant variation between successional stages. The selfing breeding system and limited seed dispersal capabilities in G. monostachia could explain the observed levels and partitioning of genetic diversity at this geographic scale. However, these results also suggest that forest fragmentation is likely to influence the degree of local genetic structuring of epiphytic plants by limiting gene flow.  相似文献   

16.

Background and Aims

Xylem flows into most fruits decline as the fruit develop, with important effects on mineral and carbohydrate accumulation. It has been hypothesized that an increase in xylem hydraulic resistance (RT) contributes to this process. This study examined changes in RT that occur during development of the berry of kiwifruit (Actinidia deliciosa), identified the region within the fruit where changes were occurring, and tested whether a decrease in irradiance during fruit development caused an increase in RT, potentially contributing to decreased mineral accumulation in shaded fruit.

Methods

RT was measured using pressure chamber and flow meter methods, the two methods were compared, and the flow meter was also used to partition RT between the pedicel, receptacle and proximal and distal portions of the berry. Dye was used as a tracer for xylem function. Artificial shading was used to test the effect of light on RT, dye entry and mineral accumulation.

Key Results

RT decreased during the early phase of rapid fruit growth, but increased again as the fruit transitioned to a final period of slower growth. The most significant changes in resistance occurred in the receptacle, which initially contributed 20 % to RT, increasing to 90 % later in development. Dye also ceased moving beyond the receptacle from 70 d after anthesis. The two methods for measuring RT agreed in terms of the direction and timing of developmental changes in RT, but pressure chamber measurements were consistently higher than flow meter estimates of RT, prompting questions regarding which method is most appropriate for measuring fruit RT. Shading had no effect on berry growth but increased RT and decreased dye movement and calcium concentration.

Conclusions

Increased RT in the receptacle zone coincides with slowing fresh weight growth, reduced transpiration and rapid starch accumulation by the fruit. Developmental changes in RT may be connected to changes in phloem functioning and the maintenance of water potential gradients between the stem and the fruit. The effect of shade on RT extends earlier reports that shading can affect fruit vascular differentiation, xylem flows and mineral accumulation independently of effects on transpiration.  相似文献   

17.
Carex digitata and Melica nutans are forest understorey herbs with wide European distributions and their northern range margins in Fennoscandia. The species have closely similar habitat requirements, occur in small populations in old forest stands on base-rich to neutral soils and have restricted dispersal abilities at the present day. This study investigates the structure of allozyme variation (12 and 8 loci, respectively) in material of both species (38 and 37 populations, respectively) from throughout southern Sweden and southern Finland. Both species show a relatively low overall genetic diversity (HT excluding monomorphic loci=0.17 and 0.18, respectively). The hierarchic structuring of allelic diversity in the species is similar, with a relatively high between-population component of diversity (GST=0.36 and 0.37, respectively). Neither of the species shows a clear intraspecific pattern of geographic differentiation. The lack of large-scale patterns of geographic differentiation is not consistent with a simple scenario of discrete and independent waves of immigration into Fennoscandia. However, particularly in M. nutans, a group of populations from a lowland belt across southwestern Finland and southern central Sweden is somewhat differentiated from populations to the north and south. A number of rare alleles in both species are widely, but patchily distributed in low frequencies. Hybridization may account for the scattered occurence of some of the rare alleles in Carex digitata, but cannot explain the distribution of rare alleles in Melica nutans. Received July 23, 2001 Accepted December 6, 2001  相似文献   

18.
The hornbeam, a shade tolerant tree species,has recolonised Europe very late during theHolocene. In order to investigate whether thispostglacial recolonisation had led to a loss ofchloroplast (cp) DNA diversity, as alreadydescribed for other tree species, andespecially the beech, another late-successionalspecies, we have studied the phylogeography ofthe hornbeam using cpDNA. Three types of cpDNAmarkers were used (PCR-RFLP, microsatellites,sequences) to analyse 36 European populationsof C. betulus and five populations ofC. orientalis. Six haplotypes specific toC. betulus were detected, one of themcompletely fixed in all populations fromnorthern and western Europe, whereas the otherswere restricted to the eastern Europeancountries and to southern Italy. A remarkablyhigh value of differentiation among populationswas found (G ST = 0.972). Twodifferent haplotypes specific to C.orientalis were detected, suggesting noongoing gene flow between these two species,and similar refugia in Italy and in the Balkansfor both Carpinus species. Pollen dataare congruent with genetic data: during thelast ice age, the hornbeam was restricted tothe Balkans and to southern Italy andrecolonised Europe northwards and westwards.Conservation priorities should target severalpopulations from these regions that arehotspots of diversity and that represent asmall part of the range of the species.  相似文献   

19.
Preservation of rare genetic stocks requires assessment of within-population genetic diversity and between-population differentiation to make inferences on their degree of uniqueness. A total of 194 Tuscan cattle (44 Calvana, 35 Chianina, 25 Garfagnina, 31 Maremmana, 31 Mucca Pisana and 28 Pontremolese) individuals were genotyped for 34 microsatellite markers. Moreover, 56 samples belonging to Argentinean Creole and Asturiana de la Montaña cattle breeds were used as an outgroup. Genetic diversity was quantified in terms of molecular coancestry and allelic richness. STRUCTURE analyses showed that the Tuscan breeds have well-differentiated genetic backgrounds, except for the Calvana and Chianina breeds, which share the same genetic ancestry. The between-breed Nei's minimum distance (Dm) matrices showed that the pair Calvana–Chianina was less differentiated (0.049 ± 0.006). The endangered Tuscan breeds (Calvana, Garfagnina, Mucca Pisana and Pontremolese) made null or negative contributions to diversity, except for the Mucca Pisana contribution to allelic richness (CT = 1.8%). The Calvana breed made null or negative within-breed contributions (f¯W = 0.0%; CW = −0.4%). The Garfagnina and Pontremolese breeds made positive contributions to between-breed diversity but negative and high within-breed contributions, thus suggesting population bottleneck with allelic losses and increase of homozygosity in the population. Exclusion of the four endangered Tuscan cattle breeds did not result in losses in genetic diversity (f¯T = −0.7%; CT = −1.2%), whereas exclusion of the non-endangered breeds (Chianina and Maremmana) did (f¯T = 2.1%; CT = 3.9%); the simple exclusion of the Calvana breed from the former group led to losses in genetic diversity (f¯T = 0.47%; CT = 2.34%), indicating a diverse significance for this breed. We showed how quantifying both within-population diversity and between-population differentiation in terms of allelic frequencies and allelic richness provides different and complementary information on the genetic backgrounds assessed and may help to implement priorities and strategies for conservation in livestock.  相似文献   

20.
Relic populations of cold-adapted species, trapped in isolated mountain pockets within the temperate zone, are predicted to suffer considerably due to ongoing climate warming. The butterfly Erebia sudetica sudetica is an example restricted to the Eastern Sudety Mts. Here, the butterfly forms permanent populations on subalpine tall-herb grasslands, but also occupies woodland clearings and hay meadows at lower altitudes. We assume differences among the genetic diversities of the populations due to differences in the temporal continuity of these habitats. Therefore, 17 allozyme loci were analysed for 276 individuals from 13 different localities (six tall-herb stands, two meadows, five forest clearings) in the Jeseník Mts. with a maximum distance of 20 km among them. We obtained a significantly higher genetic diversity for the subalpine populations than for the forest clearing populations. The genetic differentiation among the forest clearing populations was higher than among the subalpine ones. They also showed a significant isolation-by-distance system. These findings support the idea that the lower-elevation populations might have been founded by more than one dispersal event from the subalpine sites, but also secondary colonisations and gene flow in the forest belt. Due to founder effects and possibly further subsequent bottlenecks, these forest clearing populations did not harbour the entire genetic diversity of the taxon. Therefore, conservation actions should focus on the subalpine tall-herb formation.  相似文献   

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