Mitosis: Regulation and organization of cell division

Modern views on genetic, cytological and molecular bases of the structure and regulation of preparing and implementing mitotic chromosome segregation are discussed.Translated from Genetika, Vol. 40, No. 12, 2004, pp. 1589–1608.Original Russian Text Copyright © 2004 by Lebedeva, Fedorova, Trunova, Omelyanchuk.     

Mediated electrochemical measurement of the inhibitory effects of furfural and acetic acid on <Emphasis Type="Italic">Saccharomyces cerevisiae</Emphasis> and <Emphasis Type="Italic">Candida shehatae</Emphasis>

The toxic effects of furfural and acetic acid on two yeasts, Saccharomyces cerevisiae and Candida shehatae, were evaluated using an electrochemical method. Intracellular redox activities were lowered by 40% and 78% for S. cerevisiae and C. shehatae, respectively, by 8 g furfural l^–1, and by 46% and 67%, respectively, by 8 g acetic acid l^–1. The proposed method can accurately measure the effects of inhibitors on cell cultures.Revisions requested 27 September 2004/17 November 2004; Revisions received 15 November 2004/10 December 2004     

Characterization and in situ monitoring of atrazine-transforming bacteria

The possible application of the in situ hybridization method to detect soil microflora able to transform the herbicide atrazine was investigated. Digoxigenin-labeled probes were shown to provide sufficient resolution when used either for hybridization on colonies or for in situ detection of bacteria in soil.Translated from Mikrobiologiya, Vol. 73, No. 6, 2004, pp. 763–767.Original Russian Text Copyright © 2004 by Koneva.     

Biochemical problems of regulation by oligopeptides

Some problems are considered which arise in biochemical studies on structure and function of natural oligopeptides consisting of 2–50 amino acid residues. The problems under consideration include the generation of oligopeptides from precursors, chemical structure, the role of functionally important radicals and spatial configuration, and structure-function relationships. Different types of regulation are shown mainly for oligopeptides involved in muscle contraction.Translated from Biokhimiya, Vol. 69, No. 11, 2004, pp. 1565–1573.Original Russian Text Copyright © 2004 by Zamyatnin.     

Effects of <Emphasis Type="Italic">N</Emphasis>- and <Emphasis Type="Italic">C</Emphasis>-terminal truncation of HP (2-20) from <Emphasis Type="Italic">Helicobacter pylori</Emphasis> ribosomal protein L1 (RPL1) on its anti-microbial activity

HP (2-20) [derived from the N-terminal region of Helicobacter pylori Ribosomal Protein L1 (RPL1)], a 19-mer peptide, possesses broad-spectrum anti-microbial activity. As the N- (residues 2–3) and C-terminal (residues 14–20) residues can be deleted without affecting antimicrobial activity, we have now determined the minimum chain length necessary for the retention of antimicrobial activity, and its mode of action. The N- (residues 2–3) and C-terminal (residues 17–20) truncated fragments [HP (4–16)] induce increased antibiotic activity against several bacterial strains without hemolysis. Flow cytometric analysis, scanning electron microscopy and fluorescence confocal microscopy revealed that HP (4–16) acted rapidly on the plasma membranes of the fungal cells in a salt- and energy-independent manner.Revisions requested 16 September 2004/1 November 2004; Revisions received 29 October 2004/8 December 2004     

Thermostable cellulases from <Emphasis Type="Italic">Streptomyces</Emphasis>sp.: scale-up production in a 50-l fermenter

Thermostable cellulase was produced by Streptomyces sp. T3-1 grown in a 50-l fermenter. Maximum cellulase activity was attained on the fourth day when agitation speeds and aeration rates were controlled at 300 rpm and 0.75 vvm, respectively. Maximum enzyme activities were: 148 IU CMCase ml^–1, 45 IU Avicelase ml^–1, and 137 IU -glucosidase ml^–1 with productivity of 326 IU l^–1 h^–1, which were 10--32% higher than the values obtained in shake-flask culturesRevisions requested 12 October 2004/1 November 2004; Received received 1 November 2004/14 December 2004     

Cellular aggregate size as the critical factor for flavonoid production by suspension cultures of <Emphasis Type="Italic">Saussurea medusa</Emphasis>

Three previously established cell lines (yellow, red and white) of Saussurea medusa were investigated for jaceosidin and hispidulin production. Maximum yields of the jaceosidin and hispidulin were obtained in the red cell line at 75 ± 0.41 and 6.4 ± 0.31 mg l^-1. Production of jaceosidin and hispidulin correlated with the sizes of compact callus aggregates (CCA) and cellular viability. In the red cell line, the sizes of CCA were predominantly of 2–4mm diameter and accounted for 64% biomass. This line had a sustained cell viability over 10 successive sub-cultures.Revisions requested 3 September 2004/27 October 2004; Revisions received 22 October 2004/18 November 2004     

Effect of Control Strategies on Prevalence,Incidence and Re-infection of Clonorchiasis in Endemic Areas of China

Background

A pilot clonorchiasis control project was implemented to evaluate the efficacies of various chemotherapy strategies on prevalence, incidence and re-infection in Heilongjiang Province, China.

Methods and Findings

Seven intervention groups (14,139 residents, about 2000 in each group) in heavily or moderately endemic areas were subjected to repeated praziquantel administration from 2001 to 2004. In the selective chemotherapy groups, residents were examined for fecal eggs, and those who tested positive were treated with three doses of 25 mg/kg praziquantel at 5-hour-intervals in one day. However, all residents were treated in the mass chemotherapy groups. In heavily endemic areas, two mass treatments of all residents in 2001 and 2003 reduced the prevalence from 69.5% to 18.8%, while four annual mass treatments reduced the prevalence from 48.0% in 2001 to 8.4% in 2004. Selective annual treatments for egg-positive subjects reduced the egg-positive rates from 54.9% in 2001 to 15.0% in 2004 or from 73.2% in 2001 to 12.3% in 2004. Selective treatments every 6 months significantly reduced the prevalence from 59.5% in 2001 to 7.5% in 2004. All of the repeated treatments reduced EPG (eggs per gram of feces) significantly. The annual mass treatment and selective treatment every 6 months produced lower prevalence and re-infection rates and higher egg reduction rate than annual selective treatments did. In the moderate endemic areas, egg positive rates were 24.8% and 29.7% in 2001 but were 1.9% and 1.3% after 2 or 3 selective treatments. The prevalence, incidence, re-infection rates in a moderately endemic area were significantly lower than those of heavy endemic areas.

Conclusions

Repeated mass treatment or selective treatment with praziquantel every 6 to 12 months is highly effective for clonorchiasis control in heavily endemic areas. In contrast, one or two selective treatments with health education is effective in moderately endemic areas.     

Contribution of root respiration to soil respiration in a C3/C4 mixed grassland

The spatial and temporal variations of soil respiration were studied from May 2004 to June 2005 in a C₃/C₄ mixed grassland of Japan. The linear regression relationship between soil respiration and root biomass was used to determine the contribution of root respiration to soil respiration. The highest soil respiration rate of 11-54 Μmol m^-2 s^-1 was found in August 2004 and the lowest soil respiration rate of 4.99 Μmol m^-2 s^-1 was found in April 2005. Within-site variation was smaller than seasonal change in soil respiration. Root biomass varied from 0.71 kg m^-2 in August 2004 to 102 in May 2005. Within-site variation in root biomass was larger than seasonal variation. Root respiration rate was highest in August 2004 (5.7 Μmol m^-2 s^-1) and lowest in October 2004 (1.7 Μmol m^-2 s^-1). Microbial respiration rate was highest in August 2004 (5.8 Μmol m^-2 s^-1) and lowest in April 2005 (2.59 Μmol m^-2 s^-1). We estimated that the contribution of root respiration to soil respiration ranged from 31% in October to 51% in August of 2004, and from 45% to 49% from April to June 2005.     

Effects of native and invasive macroalgal canopies on composition and abundance of mobile benthic macrofauna and turf-forming algae

We examined the effects of native kelps, Laminaria longicruris de la Pylaie and L. digitata (Hudson) Lamouroux, and of the invasive alga, Codium fragile ssp. tomentosoides (Van Goor) Silva, on the composition and abundance of mobile benthic macrofauna and of turf algae by measuring the response of these assemblages to experimental removal of the respective macroalgal canopy. From June 2003 to November 2004, we censused macrofauna and measured canopy cover within 4 × 10 m strips of alternating Canopy Intact (control) and Canopy Removed treatments in both a Codium- and a Laminaria-dominated habitat in the rocky subtidal zone of a semi-protected embayment on the Atlantic coast of Nova Scotia, Canada. Macroalgal canopy cover fluctuated seasonally, peaking in September/October (69% cover in 2003; 55% cover in 2004) for Codium and in May 2004 (70% cover) for kelps, and with both canopy types reaching a winter minimum in January 2004 (22 and 28% cover, respectively). In both Codium and Laminaria habitats, significant effects of canopy removal on the overall macrofaunal assemblage were evident only during periods in which canopy cover in the Canopy Intact treatment was ≥ 50%. In the Codium habitat, 4 out of 11 characteristic taxa were more abundant in the Canopy Intact treatment, where taxonomic diversity also was higher. In contrast, 4 out of 11 characteristic taxa in the Laminaria habitat were more abundant in the Canopy Removed treatment and diversity was similar between treatments. Turf algae were sampled in November 2004 and, despite between-treatment differences in the light regime, there was no significant effect of canopy removal. Our results indicate that selection of algal habitats by mobile macrofauna is likely determined by the different shelter and foraging opportunities offered by these morphologically dissimilar ecosystem engineers.     

Re-use of shallow sediment patches by Pacific sand lance (<Emphasis Type="Italic">Ammodytes hexapterus</Emphasis>) in Barkley Sound,British Columbia,Canada

We determined whether, during the summers of 2002–2004, young-of-the-year (YOY) Pacific sand lance (Ammodytes hexapterus) re-used patches of sediment in intertidal and shallow subtidal regions of Barkley Sound, British Columbia, Canada. We examined re-use weekly at a single sediment patch in 2003 and 2004 via mark-recapture methods, monthly by re-sampling 15 patches in 2002 and interannually by re-sampling 36 patches in all 3 years (2002–2004). The mark-recapture results showed that, within each summer, batch marked YOY sand lance re-used the same patch up to 8 weeks later. The re-sampling of 15 patches over 4 months in 2002 showed that YOY sand lance consistently occupied patches within a season. We found the greatest variability in sediment patch re-use at the interannual time scale with major fluctuations in occurrence and abundance during 2002–2004. The interannual variability in patch re-use is most likely linked to abundance rather than the local or regional environmental characteristics that we examined.     

Retention of NO_3^ - in an upland streamenvironment: A mass balance approach

Models of the effects of atmosphericN deposition in forested watersheds have notadequately accounted for the effects of aquatic andnear-stream processes on the concentrations and loadsof NO in surface waters. This studycompared the relative effects of aquatic andnear-stream processes with those from the terrestrialecosystem on the retention and transport ofNO in two contrasting stream reaches ofthe Neversink River, a forested watershed in theCatskill Mountains of New York that receives among thehighest load of atmospheric N deposition in thenortheastern United States. Stream water samples werecollected every two hours and ground-water andtributary samples were collected daily at base flowconditions during four 48-hour periods from April toOctober 1992, and NO mass balances werecalculated for each site. Results indicated diurnalvariations in stream NO concentrations inboth reaches during all four sampling periods; this isconsistent with uptake of NO byphotoautotrophs during daylight hours. Mass-balanceresults revealed significant stream reach losses ofNO at both sites during all samplingperiods. The diurnal variations in NO concentrations and the retention of NO relative to terrestrial contributions to the streamreaches were greater downstream than upstream becausephysical factors such as the head gradients ofinflowing ground water and the organic matter contentof sediment are more favorable to uptake anddenitrification downstream. The mass retention ofNO increased as the mean 48-hr streamdischarge increased at each site, indicating that theresponsible processes are dependent onNO supply. Low stream temperatures duringthe April sampling period, however, probably reducedthe rate of retention processes, resulting in smallerlosses of NO than predicted from streamdischarge alone. Water samples collected from thestream, the hyporheic zone, and the alluvial groundwater at sites in both reaches indicated that the neteffect of hyporheic processes on downstreamNO transport ranged from conservativemixing to complete removal by denitrification. Therelative effects of biological uptake anddenitrification as retention mechanisms could not bequantified, but the results indicate that bothprocesses are significant. These results generallyconfirm that aquatic and near-stream processes causesignificant losses of NO in the NeversinkRiver, and that the losses by these processes atdownstream locations can exceed the NO contributions to the stream from the terrestrialenvironment during summer and fall base-flowconditions. Failure to consider these aquatic andnear-stream processes in models of watershed responseto atmospheric N deposition could result inunderestimates of the amount of NO leaching from forested ecosystems and to an inabilityto unequivocally relate geographic differences inNO concentrations of stream waters tocorresponding differences in terrestrial processes.     

Demonstration of the Bzura River restoration using diatom indices

The quality of running waters is reflected in the composition of benthic diatom assemblages. The biological assessment of changes in the composition, and thus of changes in water quality, was carried out in the lowland mid-sized Bzura River, Central Poland, over the period of 30 years. The benthic diatom material consisted of samples collected in two investigation periods, in 1972 and in 2003–2004. The methods applied were three diatom indices, IPS — Specific Pollution Sensitivity Index, GDI — Genetic Diatom Index and TDI —Trophic Diatom Index, and the OMNIDIA computer program, which are commonly used in Europe. The aim of the study was demonstrating the process of restoration that occurred in the river. The Bzura was included to the most polluted ones in Poland till 1996. Since 1998 a gradual improvement in water quality has been observed, which is caused by a number of biological-technical measures, mostly a proper organization of sewage management in most cites located on the river. In 1972 the IPS classified Bzura water into Water Quality Class IV-V, while in 2003–2004 it reached much higher values, i.e. Class III–IV. On the basis of the GDI Class III was determined in the whole river in 2003–2004, while its values indicated Class III–IV in 1972. The trophic index, TDI attributed Bzura water to the eutrophic to hypereutrophic zone in 2003–2004, and to one degree better water, i.e. from the mesoeutrophic to eutrophic zone, in 1972.     

Effect of chronic acidosis on discharge frequency of intrapulmonary chemoreceptors in the chicken

Summary In order to determine the pH effect on the discharge of intrapulmonary chemoreceptors (IPC) not mediated through , we determined discharge frequency-ln relationships of 28 IPC from ten adult cockerels made acidotic by ingestion of feed containing 6% NH₄Cl for 2 to 5 days. Blood buffer curves — the relationships between pH and — from these cockerels were shifted in parallel towards acidosis by 0.24 pH units (SE=±0.05) compared to control curves. The average slope of the IPC discharge frequenc-ln relationships was less negative than that reported for similar cockerels with normal acid-base balance and the average intercept was decreased. We conclude that pH has an effect on IPC discharge, independent of changes in ; this effect decreases IPC sensitivity to CO₂. We calculate that a shift towards acidosis in the blood buffer curve of one pH unit causes the slope of the IPC discharge frequency-ln relationship to be less negative by 14.7±3.3 imp (s·ln )^–1 and that for any acidotic shift in the blood buffer curve (pH), the average IPC discharge frequency=[–10.7+(14.7·pH)][ln( /25.5)]+3.37. Since IPC discharge is altered by changes in acid-base balance, IPC may contribute to the implementation of respiration responses during metabolic disturbances.Abbreviation IPC intrapulmonary chemoreceptor     

Blooms of Pseudo-nitzschia and domoic acid in the San Pedro Channel and Los Angeles harbor areas of the Southern California Bight, 2003–2004

Abundances of Pseudo-nitzschia spp. and concentrations of particulate domoic acid (DA) were determined in the Southern California Bight (SCB) along the coasts of Los Angeles and Orange Counties during spring and summer of 2003 and 2004. At least 1500 km² were affected by a toxic event in May/June of 2003 when some of the highest particulate DA concentrations reported for US coastal waters were measured inside the Los Angeles harbor (12.7 μg DA L⁻¹). Particulate DA levels were an order of magnitude lower in spring of 2004 (February and March), but DA concentrations per cell at several sampling stations during 2004 exceeded previously reported maxima for natural populations of Pseudo-nitzschia (mean = 24 pg DA cell⁻¹, range = 0–117 pg DA cell⁻¹). Pseudo-nitzschia australis dominated the Pseudo-nitzschia assemblage in spring 2004. Overall, DA-poisoning was implicated in >1400 mammal stranding incidents within the SCB during 2003 and 2004. Ancillary physical and chemical data obtained during our regional surveys in 2004 revealed that Pseudo-nitzschia abundances, particulate DA and cellular DA concentrations were inversely correlated with concentrations of silicic acid, nitrogen and phosphate, and to specific nutrient ratios. Particulate DA was detected in sediment traps deployed at 550 and 800 m depth during spring of 2004 (0.29–7.6 μg DA (g sediment dry weight)⁻¹). The highest DA concentration in the traps was measured within 1 week of dramatic decreases in the abundances of Pseudo-nitzschia in surface waters. To our knowledge these are the deepest sediment trap collections from which DA has been detected. Sinking of the spring Pseudo-nitzschia bloom may constitute a potentially important link between DA production in surface waters and benthic communities in the coastal ocean near Los Angeles. Our study indicates that toxic blooms of Pseudo-nitzschia are a recurring phenomenon along one of the most densely populated coastal stretches of the SCB and that the severity and magnitude of these events can be comparable to or greater than these events in other geographical regions affected by domoic acid.     

The population trend of southern elephant seals (<Emphasis Type="Italic">Mirounga leonina</Emphasis> L.) at Macquarie Island (1952–2004)

Total numbers of adult female southern elephant seals (cows) breeding at Macquarie Island were determined for 19 of the 52 year period between 1952 and 2004. Totals for 1952–1987 (exc. 1959 and 1985) were estimated from the relationship between censuses of the isthmus study area and concurrent censuses for the whole island. Totals for 1987–2004 were obtained by direct census of the entire island in mid-October. Cow numbers decreased from a maximum of about 40,000 in the 1950s to a minimum of 18,300 in 2000, but then increased slightly to 19,200 in 2004. Nonlinear and post-hoc linear analysis of the count data identified 1999 as the year when the exponential rate of change (r) slowed from −1.4% per annum to near zero. The rate of change was not uniform for each census sub-area counted (1987–2004), suggesting that certain terrestrially based density-dependent mechanisms were influencing the annual distribution of cows.     

Effect of seawater temperature on the productivity of <Emphasis Type="Italic">Laminaria japonica</Emphasis> in the Uwa Sea,southern Japan

Recent studies on global climate change report that increase in seawater temperature leads to coastal ecosystem change, including coral bleaching in the tropic. In order to assess the effect of increased seawater temperature on a temperate coastal ecosystem, we studied the inter-annual variation in productivity of Laminaria japonica using long-term oceanographic observations for the Uwa Sea, southern Japan. The annual productivity estimates for L. japonica were 2.7 ± 2.5 (mean ± SD) kg wet wt. m⁻¹ (length of rope) (2003/2004), 1.0 ± 0.6 kg wet wt. m⁻¹ (2004/2005) and 12.1 ± 12.5 kg wet wt. m⁻¹ (2005/2006). Our previous study using the same methodology at the same locality reported that the productivity was estimated for the 2001/2002 (33.3 ± 15.2 kg wet wt. m⁻¹) and 2002/2003 (34.0 ± 8.7 kg wet wt. m⁻¹) seasons. Productivity in 2003/2004 and 2004/2005 was significantly lower than in years 2001/2002, 2002/2003 and 2005/2006. A comparison of oceanographic conditions among the 5 years revealed the presence of threshold seawater temperature effects. When the average seawater temperature during the first 45 days of each experiment exceeded 15.5°C, productivity was reduced to about 10 % of that in cooler years. Moreover the analysis of growth and erosion rates indicates that when the seawater temperature was over 17.5°C, erosion rate exceeded growth rate. Thus, an increase of seawater temperature of just 1°C during winter drastically reduces the productivity of L. japonica in the Uwa Sea.     

A method for determining the maximal steady state of blood lactate concentration from two levels of submaximal exercise

The aim of this study was to estimate the characteristic exercise intensity _CL which produces the maximal steady state of blood lactate concentration (MLSS) from submaximal intensities of 20 min carried out on the same day and separated by 40 min. Ten fit male adults [maximal oxygen uptake _max 62 (SD 7) ml · min^–1 · kg^–1] exercisOed for two 30-min periods on a cycle ergometer at 67% (test 1.1) and 82% of _max (test 1.2) separated by 40 min. They exercised 4 days later for 30 min at 82% of _max without prior exercise (test 2). Blood lactate was collected for determination of lactic acid concentration every 5 min and heart rate and O₂ uptake were measured every 30 s. There were no significant differences at the 5th, 10th, 15th, 20th, 25th, or 30th min between , lactacidaemia, and heart rate during tests 1.2 and 2. Moreover, we compared the exercise intensities _CL which produced the MLSS obtained during tests 1.1 and 1.2 or during tests 1.1 and 2 calculated from differential values of lactic acid blood concentration ([1a^–]_b) between the 30th and the 5th min or between the 20th and the 5th min. There was no significant difference between the different values of _CL [68 (SD 9), 71 (SD 7), 73 (SD 6),71 (SD 11) % of _max (ANOVA test,P<0.05). Four subjects ran for 60 min at their _CL determined from periods performed on the same day (test 1.1 and 1.2) and the difference between the [la^–]_b at 5 min and at 20 min ( ([la^–]_b)) was computed. The [la^–]_b remained constant during exercise and ranged from 2.2 to 6.7 mmol · l^–1 [mean value equal to 3.9 (SD 1) mmol · l^–1]. These data suggest that the _CL protocol did not overestimate the exercise intensity corresponding to the maximal fractional utilization of _max at MLSS. For half of the subjects the _CL was very close to the higher stage (82% of _max where an accumulation of lactate in the blood with time was observed. It can be hypothesized that _CL was very close to the real MLSS considering the level of accuracy of [la^–]_b measurement. This study showed that exercise at only two intensities, performed at 65% and 80% of _max and separated by 40 min of complete rest, can be used to determine the intensity yielding a steady state of [la^–1]_b near the real MLSS workload value.