Occurrence and coexistence of arbuscular mycorrhizal fungi and dark septate fungi in aquatic macrophytes in a tropical river-floodplain system

In this study, carried out in four water bodies in the Upper Paraná River floodplain, we assessed the occurrence of root colonization by arbuscular mycorrhizal fungi (AMF) and dark septate fungi (DSF), as well as the AMF species richness associated with 24 species of aquatic macrophytes belonging to different life forms. AMF were found in nine species of macrophytes and DSF in 16 species among the 24 investigated. AM colonization occurred mainly in eudicotiledons (five of the six species evaluated) and the Paris morphology was the most common type. Co-occurrence of AMF and DSF was observed in seven species of macrophytes (Commelinaceae sp. 1, Limnobium laevigatum (H.B.K. ex Willd) Heine, Hygrophila cf. costata, Myriophyllum brasiliense (Camb), Polygonum acuminatum Kunth, P. ferrugineum Wedd and P. stelligerum Cham). Four species of macrophytes (Pistia stratiotes L., Eichhornia crassipes (Mart.) Solms, Egeria najas Planch and Nymphaea amazonum Mart. & Zucc) were not colonized by any type of fungi. In total, 27 morphotypes of AMF were recorded, and spores occurred both in the rhizosphere of macrophytes whose roots were internally colonized by AMF and in non-colonized macrophytes. Acaulospora delicata, Acaulospora aff. laevis, Acaulospora longula, Glomus lamellosum, Glomus luteum and NID 1 (a non-identified species) were the most frequent species. Samples collected close to the roots of N. amazonum had the highest AMF richness (20 species), but this plant was not colonized by fungi. A species richness curve indicated that more root-associated fungi than reported here are likely present in this floodplain.     

Seasonality of arbuscular mycorrhizal symbiosis and dark septate endophytes in a grassland site in southwest China

Arbuscular mycorrhizal and dark septate endophytic fungal colonization in a grassland in Kunming, southwest China, was investigated monthly over one year. All plant roots surveyed were co-colonized by arbuscular mycorrhizal and dark septate endophytic fungi in this grassland. Both arbuscular mycorrhizal and dark septate endophytic fungal colonization fluctuated significantly throughout the year, and their seasonal patterns were different in each plant species. The relationships between environmental (climatic and edaphic) factors and fungal colonization were also studied. Correlation analysis demonstrated that arbuscular mycorrhizal colonization was significantly correlative with environmental factors (rainfall, sunlight hours, soil P, etc.), but dark septate endophytic fungal colonization was only correlative with relative humidity and sunlight hours.     

Swamp rabbits as indicators of wildlife habitat quality in bottomland hardwood forest ecosystems

Reforestation of bottomland hardwood (BLH) forests has occurred within the Lower Mississippi Alluvial Valley (LMAV), USA, to support a wide range of ecosystem services, but especially wildlife habitat enhancement. As ecosystem restoration efforts proceed in BLH ecosystems, managers and policymakers are seeking criteria to evaluate wildlife habitat enhancement goals. Specialist wildlife that evolved within forest ecosystems can be sensitive to the composition, structure, and function of an ecosystem in relation to the system's natural or historical range of variation and thereby serve as indicators of habitat quality. The swamp rabbit (Sylvilagus aquaticus) is a specialist species of BLH forests throughout the LMAV and therefore may be an appropriate indicator species for this ecosystem. To address this, we reviewed peer-reviewed literature to evaluate the utility of swamp rabbits as an indicator species according to three commonly-used criteria: habitat factors defining swamp rabbit relationships to BLH forests, the importance of swamp rabbit habitat to other wildlife, and the efficiency of swamp rabbit monitoring. We conclude that the swamp rabbit is a suitable indicator of wildlife habitat quality in BLH ecosystems in the LMAV because they evolved and remain endemic to the ecosystem, use habitat that integrates desirable characteristics that positively influence wildlife biodiversity, and are easy to monitor routinely.     

Wetland dicots and monocots differ in colonization by arbuscular mycorrhizal fungi and dark septate endophytes

As an initial step towards evaluating whether mycorrhizas influence composition and diversity in calcareous fen plant communities, we surveyed root colonization by arbuscular mycorrhizal fungi (AMF) and dark septate endophytic fungi (DSE) in 67 plant species in three different fens in central New York State (USA). We found colonization by AMF and DSE in most plant species at all three sites, with the type and extent of colonization differing between monocots and dicots. On average, AMF colonization was higher in dicots (58±3%, mean±SE) than in monocots (13±4%) but DSE colonization followed the opposite trend (24±3% in monocots and 9±1% in dicots). In sedges and cattails, two monocot families that are often abundant in fens and other wetlands, AMF colonization was usually very low (<10%) in five species and completely absent in seven others. However, DSE colonization in these species was frequently observed. Responses of wetland plants to AMF and DSE are poorly understood, but in the fen communities surveyed, dicots appear to be in a better position to respond to AMF than many of these more abundant monocots (e.g., sedges and cattails). In contrast, these monocots may be more likely to respond to DSE. Future work directed towards understanding the response of these wetland plants to AMF and DSE should provide insight into the roles these fungal symbionts play in influencing diversity in fen plant communities.     

Development of restoration trajectory metrics in reforested bottomland hardwood forests applying a rapid assessment approach

Large scale wetland restoration and reforestation efforts continue to expand throughout the Lower Mississippi Valley. Monitoring of restoration performance and the development of restoration trajectories pose challenges to resource managers and remain problematic due to (1) temporal patterns in forest succession, (2) budget constraints and short project monitoring timeframes, (3) disparity in the extent of pre-restoration hydrologic and landscape manipulations, and (4) lack of coherent restoration performance standards. The current work establishes a framework for identifying restoration trajectory metrics within project-relevant timescales. The study examined 17 variables commonly applied in rapid assessments. Four variables yielded positive restoration trajectories within a few years to 20 years. These include shrub-sapling density, ground vegetation cover, and development of organic and A soil horizons. Remaining variables including flood frequency and tree density provide limited useful information within critical early years following reforestation due to the time required for measurable changes to occur. As a result, assessment components are classified into three categories of rapid response, response, and stable variables. Restoring entities should maximize stable variables (e.g., afforestation species composition) during project implementation through site selection and planting techniques; while development of restoration milestones should focus on rapid response variables. Data collected at mature bottomland hardwood control sites displays the non-linearity of trajectory curves over decadal time scales.     

Red list plants: colonization by arbuscular mycorrhizal fungi and dark septate endophytes

Since information concerning the mycorrhization of endangered plants is of major importance for their potential re-establishment, we determined the mycorrhizal status of Serratula tinctoria (Asteraceae), Betonica officinalis (Lamiaceae), Drosera intermedia (Droseraceae) and Lycopodiella inundata (Lycopodiaceae), occurring at one of two wetland sites (fen meadow and peat bog), which differed in soil pH and available P levels. Root colonization by arbuscular mycorrhizal fungi (AMF) and dark septate endophytes (DSE) was quantified. Colonization by AMF appeared to be more frequent in the fen meadow than in the peat bog, and depended on the host plant. Roots of S. tinctoria and B. officinalis were well colonized by AMF in the fen meadow (35–55% root length) and both arbuscules and vesicles were observed to occur in spring as well as in autumn. In the peat bog, L. inundata showed a low level of root colonization in spring, when vesicles were found frequently but no arbuscules. In roots of D. intermedia from the peat bog, arbuscules and vesicles were observed, but AMF colonization was lower than in L. inundata. In contrast, the amount of AMF spores extracted from soil at the peat bog site was higher than from the fen meadow soil. Spore numbers did not differ between spring and autumn in the fen meadow, but they were higher in spring than in autumn in the peat bog. Acaulospora laevis or A. colossica and Glomus etunicatum were identified amongst the AMF spores extracted from soil at the two sites. S. tinctoria and B. officinalis roots were also regularly colonized by DSE (18–40% root length), while L. inundata was only rarely colonized and D. intermedia did not seem to be colonized by DSE at all.     

丛枝菌根真菌与深色有隔内生真菌生态修复功能与作用

生态修复是目前全球关注的热点问题,如何增加植被的覆盖度及生态修复效率是目前研究的重点。丛枝菌根真菌(arbuscular mycorrhiza fungi,AMF)和深色有隔内生真菌(dark septate endophyte,DSE)均是自然界植物根际分布广泛的一类内生真菌,均能与植物形成菌根共生体,具有一定的促进植物生长、抵抗逆境及修复污染土壤等功能与作用,在生态修复中具有广泛的应用潜力。本文综述了AMF及DSE两种微生物的功能、作用及其在生态修复应用中的研究进展,并进一步对AMF和DSE在生态修复中存在的问题和前景进行展望。     

Seasonal and temporal dynamics of arbuscular mycorrhizal and dark septate endophytic fungi in a tallgrass prairie ecosystem are minimally affected by nitrogen enrichment

Root colonization by arbuscular mycorrhizae (AM) and dark septate endophytic (DSE) fungi in nitrogen amended and unamended mixed tallgrass prairie communities were analyzed monthly over two growing seasons. Roots were stained with Trypan blue and Sudan IV and fungal structures quantified using the modified magnified intersections method. Root length colonized (RLC) by DSE exceeded AM colonization during early part of the growing season. Fungal colonization varied among the years and was greater in 2003 than in 2002. Seasonal variation among the months within a growing season was observed in 2002 but not in 2003 for both AM and DSE. AM fungi were most abundant during the peak growing season of dominant C₄ vegetation while DSE were most abundant during the early part of the growing season. Hyperparasitism of AM hyphal coils by melanized septate fungi was frequently observed and increased with AM coil frequency. Although nitrogen amendment had altered the plant community composition, it had no impact on the colonization by AM or DSE fungi.     

接种AMF和DSE对蛋白桑提质增产效应的影响

【目的】探究丛枝菌根真菌(arbuscular mycorrhiza fungi,AMF)和深色有隔内生真菌(dark septate endophyte,DSE)对蛋白桑(Morus alba)产量及品质的影响。【方法】采用盆栽试验,以丛枝菌根真菌和深色有隔内生真菌为微生物处理菌剂,通过设置单接种DSE、单接种AMF和联合接种DSE+AMF 3种不同微生物组合研究对蛋白桑生长、产量和品质等影响,探索微生物菌剂对生态饲料作物蛋白桑的经济潜力。【结果】与未接菌处理(CK)相比,3种接菌处理均能显著促进蛋白桑地上部生长,提高地上部生物量,增加幅度为156.4%‒196.6%;接菌微生物提高了蛋白桑的光合速率,增加了植物叶片氮、磷、钾的累积,提高蛋白桑的产量。接种微生物会使蛋白桑叶粗蛋白含量提升,降低饲料纤维营养价值,从而综合改善蛋白桑品质。微生物处理能够显著增加蛋白桑的叶茎比,提升了蛋白桑叶片的比例,优化生长结构,不同微生物处理对蛋白桑叶片各饲用品质指标的影响较其相应茎部更为明显,可以根据桑叶和茎秆的蛋白含量进行合理搭配获得饲料不同品级,从整体水平上提升蛋白桑地上部植株的饲用品质。接种微生物均对蛋白桑饲用品质等级得到极大提升,显著降低了酸性洗涤纤维和中性洗涤纤维含量,降低幅度分别为18.4%‒34.6%和41.0%‒45.4%;接菌处理各蛋白桑的相对饲用价值范围在220.0‒241.5,显著提高0.8‒1.0倍,且维生素C含量、含糖量和生物碱含量等均有增加。【结论】采用主成分分析方法,按照对蛋白桑产量和品质的综合影响大小的贡献排序,依次为:AMF+DSE>DSE>AMF>CK,DSE可作为采煤沉陷区生物修复中经济作物蛋白桑的优选微生物菌剂,能促进蛋白桑的产量并提升品质。     

Further root colonization by arbuscular mycorrhizal fungi in already mycorrhizal plants is suppressed after a critical level of root colonization

An established arbuscular mycorrhizal symbiosis suppresses further mycorrhization. It is not clear whether the observed suppressional effect is linked with the level of root colonization or not. In the present work we studied the effect of the degree of root colonization by the arbuscular mycorrhizal fungus Glomus mosseae on further root colonization by G. mosseae. At different time points barley plants grown in split-root compartments were pre-inoculated on one half of the split-root system with G. mosseae. Sequential inoculation resulted in different colonization levels. Thereafter, the second half of the split root system was inoculated. The results indicate an enhanced suppression of root colonization on the second side of the split-root system when colonization levels increased on the first side.     

Responses of fungal root colonization,plant cover and leaf nutrients to long‐term exposure to elevated atmospheric CO2 and warming in a subarctic birch forest understory

Responses of the mycorrhizal fungal community in terrestrial ecosystems to global change factors are not well understood. However, virtually all land plants form symbiotic associations with mycorrhizal fungi, with approximately 20% of the plants' net primary production transported down to the fungal symbionts. In this study, we investigated how ericoid mycorrhiza (ErM), fine endophytes (FE) and dark septate endophytes (DSE) in roots responded to elevated atmospheric CO₂ concentrations and warming in the dwarf shrub understory of a birch forest in the subarctic region of northern Sweden. To place the belowground results into an ecosystem context we also investigated how plant cover and nutrient concentrations in leaves responded to elevated atmospheric CO₂ concentrations and warming. The ErM colonization in ericaceous dwarf shrubs increased under elevated atmospheric CO₂ concentrations, but did not respond to warming following 6 years of treatment. This suggests that the higher ErM colonization under elevated CO₂ might be due to increased transport of carbon belowground to acquire limiting resources such as N, which was diluted in leaves of ericaceous plants under enhanced CO₂. The elevated CO₂ did not affect total plant cover but the plant cover was increased under warming, which might be due to increased N availability in soil. FE colonization in grass roots decreased under enhanced CO₂ and under warming, which might be due to increased root growth, to which the FE fungi could not keep up, resulting in proportionally lower colonization. However, no responses in aboveground cover of Deschampsia flexuosa were seen. DSE hyphal colonization in grass roots significantly increased under warmer conditions, but did not respond to elevated CO₂. This complex set of responses by mycorrhizal and other root‐associated fungi to global change factors of all the fungal types studied could have broad implications for plant community structure and biogeochemistry of subarctic ecosystems.     

Short-term consequences of slash-and-burn practices on the arbuscular mycorrhizal fungi of a tropical dry forest

Rates of land conversion from forest to cultivated land by slash-and-burn practices are higher in tropical dry forest (TDF) than any other Neotropical forest type. This study examined the short-term consequences of the slash-and-burn process on arbuscular mycorrhizal fungi (AMF). We expected that slash-and-burn would reduce mycorrhizal colonization and propagules and change species richness and composition. Soil and root samples were taken from TDF control and pasture plots originated after slash-and-burn at four dates during the year of conversion to examine species composition, spore abundance, and infective propagules. Additionally, spore abundance and viability and viable intraradical colonization were measured twice during the second year after conversion. Forest and pasture plots maintained similar species richness and an overall 84% similarity during the first year after conversion. Infective propagules were reduced in pasture plots during the first year after slash-and-burn, whereas spore abundance and intraradical colonization remained similar in TDF and pasture plots both years of the study. Our results suggest, contrary to the expected, that forest conversion by means of slash-and-burn followed by cultivation resulted in few immediate changes in the AMF communities, likely because of the low heat conductivity of the soil and rapid combustion of plant residues.     

Identification of arbuscular mycorrhizal fungi in soils and roots of plants colonizing zinc wastes in southern Poland

 Analysis of the community of arbuscular mycorrhizal (AM) fungi in roots of Fragaria vesca growing in a heavy metal contaminated site was carried out on a Zn waste site near Chrzanow (southern Poland). The waste substratum was characterized by high contents of Pb, Zn, Cd, Cu and As, and by low levels of N, P and organic matter. Spores of Glomales were isolated by wet sieving and DNA was isolated from individual spores. Nested polymerase chain reaction (PCR) with taxon-specific primers was used to identify the species Glomus mosseae, Glomus intraradices and Glomus claroideum. Spores of other fungi were morphologically characterized and new taxon-discriminating molecular probes were developed for two of them (Glomus sp. HM-CL4 and HM-CL5) based on variations in the large ribosomal subunit (25S rDNA). High sequence similarities were found between Glomus sp. HM-CL4 and Glomus gerdemanii, and between Glomus sp. HM-CL5 and Glomus occultum. The designed primers were used to characterize the population of AM fungi colonizing the roots of F. vesca collected from the Zn waste site. The analysis, carried out on roots stained with trypan blue, showed that the most effective colonizer was closely related to G. gerdemannii. G. claroideum and the G. occultum-like fungus were slightly less common whilst frequencies of G. intraradices and G. mosseae in roots were much lower. The analysis of mycorrhiza stained with rhodizoniate to localize heavy metal accumulation showed that the stain does not influence the PCR reaction. Seventy percent of the root samples containing positively stained fungal hyphae were found to be colonized by G. mosseae. The data obtained demonstrate the usefulness of nested PCR for studies carried out in polluted areas. It will enable selection of AM fungi which are able to colonize plant roots under heavy metal stress conditions, as well as the identification of fungi showing high in situ accumulation of potentially toxic elements. Accepted: 7 July 2000     

Colonization Characteristics and Composition of Dark Septate Endophytes (DSE) in a Lead and Zinc Slag Heap in Southwest China

The colonization characteristics and diversity of dark septate endophytes (DSE) associated with plants growing in a lead and zinc slag heap with a more than 250-year history in southwestern China were assessed. A total of 117 plant samples belonging to 29 species and 19 families were examined, and 97% (28/29) were colonized by dark septate fungal hyphae or microsclerotia. DSE colonization intensity varied greatly across plant species and also across individuals of the same species, showing a hyphal colonization range of 0.0–35.7%. In total, 38 melanized root-associated fungi with various morphological characteristics were isolated and 82% (31/38) of fungi were closely related to well-known DSE fungi, such as Exophiala spp., Phialophora (= Cadophora) spp., Phialocephala spp., and Leptodontidium spp. Among these, Phialophora and Exophiala were the dominant genera. Our results showed that DSE dominantly colonized the roots of the pioneer plants growing in such an ancient Pb-Zn slag heap. By contributing to metal tolerance and nutrient acquisition, DSE may be integral to the function of metal mine ecosystems.     

High diversity of arbuscular mycorrhizal fungi in a boreal herb-rich coniferous forest

* Here, the diversity of arbuscular mycorrhizal (AM) fungi was determined in a boreal herb-rich coniferous forest in relation to environmental variables. * Root samples of five plant species (Fragaria vesca, Galeobdolon luteum, Hepatica nobilis, Oxalis acetosella and Trifolium pratense) were analysed from stands differing in age and forest management intensity. * Thirty-four Glomeromycota taxa (small-subunit ribosomal RNA gene (SSU rDNA) sequence groups) were detected from 90 root samples (911 clones), including eight new taxa. Sequence groups related to Glomus intraradices were most common (MO-G3 and MO-G13). Samples of H. nobilis were colonized by more AM fungal taxa (3.68 +/- 0.31) than those of O. acetosella (2.69 +/- 0.34), but did not differ significantly in this respect from those of F. vesca (3.15 +/- 0.38). Effects of forest management, host plant species (except above) or season on the number or composition of fungal taxa in root samples were not detected, and neither were they explained by environmental variables (vegetation, soil and light conditions). * This is the most taxon-rich habitat described to date in terms of root-colonizing Glomeromycota. The data demonstrate the importance of temperate coniferous forests as habitats for AM fungi and plants. Lack of obvious fungal community patterns suggests more complex effects of biotic and abiotic factors, and possibly no adverse effect of common forest management practices on AM fungal diversity.     

Effect of drought and season on arbuscular mycorrhizal fungi in a subtropical secondary forest

Arbuscular mycorrhizal (AM) fungi in both soil and roots were examined in May (summer) and December (winter) under a 4-y drought experiment in a Chinese subtropical secondary forest. Drought significantly decreased AM fungal extra-radical hyphal density, spore density, and root colonization rate in both seasons. These AM parameters were significantly higher in summer than in winter in the control treatment, but only AM fungal extra-radical hyphal density exhibited the same seasonal trend in the drought treatment. In total, 45 AM fungal operational taxonomic units (OTUs) were obtained at a 97% sequence similarity level using Illumina sequencing of 18S rDNA. Drought and season had no significant effects on AM fungal OTU richness in soil and roots. AM fungal community composition in soil and roots was significantly affected by season but not by drought. This finding enhances our understanding of the response of AM fungi to global climate change in subtropical forest ecosystems.     

Molecular diversity of arbuscular mycorrhizal fungi and patterns of host association over time and space in a tropical forest

We have used molecular techniques to investigate the diversity and distribution of the arbuscular mycorrhizal (AM) fungi colonizing tree seedling roots in the tropical forest on Barro Colorado Island (BCI), Republic of Panama. In the first year, we sampled newly emergent seedlings of the understory treelet Faramea occidentalis and the canopy emergent Tetragastris panamensis, from mixed seedling carpets at each of two sites. The following year we sampled surviving seedlings from these cohorts. The roots of 48 plants were analysed using AM fungal-specific primers to amplify and clone partial small subunit (SSU) ribosomal RNA gene sequences. Over 1300 clones were screened for random fragment length polymorphism (RFLP) variation and 7% of these were sequenced. Compared with AM fungal communities sampled from temperate habitats using the same method, the overall diversity was high, with a total of 30 AM fungal types identified. Seventeen of these types have not been recorded previously, with the remainder being similar to types reported from temperate habitats. The tropical mycorrhizal population showed significant spatial heterogeneity and nonrandom associations with the different hosts. Moreover there was a strong shift in the mycorrhizal communities over time. AM fungal types that were dominant in the newly germinated seedlings were almost entirely replaced by previously rare types in the surviving seedlings the following year. The high diversity and huge variation detected across time points, sites and hosts, implies that the AM fungal types are ecologically distinct and thus may have the potential to influence recruitment and host composition in tropical forests.     

Terrestrial vertebrates promote arbuscular mycorrhizal fungal diversity and inoculum potential in a rain forest soil

We examined whether terrestrial vertebrates affected the arbuscular mycorrhizal fungal spore communities and mycorrhizal inoculum potential (MIP) of a tropical rain forest soil by comparing plots where terrestrial vertebrates had been excluded for 3 years to adjacent control plots. We extracted spores from soil using sucrose density gradient centrifugation and assayed MIP by growing seedlings of maize ( Zea mays ) and a rain forest tree ( Flindersia brayleana ) in intact soil cores from exclosure and control plots. Control plots had significantly higher spore abundance, species richness and diversity than exclosures. Spore community composition also differed significantly between exclosure and control plots. Seedlings of both plant species grown in control cores had significantly higher arbuscular-mycorrhizal colonization than those grown in exclosure cores. This study suggests that loss of vertebrates could alter rates of mycorrhizal colonization with consequences for community and ecosystem properties.     

Abundance of arbuscular mycorrhizal fungi spores in different environments in a tropical rain forest, Veracruz, Mexico

 The aim of this study was to compare mycorrhizal abundance and diversity in sites with different regimes of disturbance in a tropical rain forest at Los Tuxtlas, Veracruz, Mexico. Arbuscular mycorrhizal spores were quantified at two sites: closed canopy and gaps in the forest. Data were recorded during dry, rainy, and windy ("nortes") seasons. Spores of eight Glomus species, sporocarps of three Sclerocystis species, three species of Acaulospora and two of Gigaspora were found. Significant differences in the number of species and spores were found among seasons. The highest numbers of species and spores were observed during the dry season, with a marked decrease during the rainy season. Our results show that disturbance does not but seasonality does affect abundance and richness of mycorrhizal spores in this tropical wet forest. Accepted: 11 October 1998