Role of sugarcane straw allelochemicals in the growth suppression of arrowleaf sida

Previous studies suggested that allelochemicals from sugarcane straw may suppress the growth of arrowleaf sida (Sida rhombifolia L.). A study was conducted to establish: (1) the direct or indirect role of the organic molecules from sugarcane straw leachate on the growth suppression of arrowleaf sida and (2) if leachate phytotoxins induce proline accumulation in arrowleaf sida tissues as an adaptative response to a water or an oxidative stress. Inhibition of root elongation was the primary effect of sugarcane straw leachate on arrowleaf sida grown in unsterile soil. Addition of activated charcoal to unsterile soil before incorporation of straw leachate reduced the inhibition in root growth suggesting a direct participation of organic molecules in leachate phytotoxicity on arrowleaf sida. Inorganic straw constituents did not inhibit root growth while microbial activity increased leachate phytotoxicity. Soil chemical analysis suggested a direct action of organic molecules in leachate phytotoxicity rather than variations in macro and micronutrients or nutrient microbial immobilization. Straw leachate induced proline accumulation in roots and cotyledons of arrowleaf sida. Proline increase was related with oxidative stress in the roots but not in the cotyledons. Our results indicate a direct action of organic compounds from sugarcane straw and/or their microbial transformation products on root growth of arrowleaf sida. These substances induced proline accumulation in roots mainly as consequence of an oxidative stress while water stress may be the main cause of high proline content in the cotyledons. Although the observed responses could be due to phenolic compounds, the involvement of organic molecules with other chemical nature could not be excluded.     

Nature of the Interference Mechanism of Sugarcane (Saccharum officinarum L.) Straw

Sugarcane (Saccharum officinarum L.) straw left in the field after harvest interferes with the growth of winter and summer weeds. In the last years, there was a progressive move away from burning sugarcane straw to retaining it on the soil surface after harvest to prevent soil degradation and environmental pollution. Water-soluble phenolics leachated from straw into soil may suppress weed growth. A study was carried out to investigate (1) the effect of biotic (unautoclaved) soil treated with burned and unburned sugarcane straw leachates on seedling growth and foliar proline content of beggarticks (Bidens subalternans L.) and wild mustard (Brassica campestris L.), (2) the modification of sugarcane straw phytotoxicity in abiotic (autoclaved) soil and biotic (unautoclaved) soil plus activated charcoal, and (3) changes of inorganic ions and phenolic contents in biotic soil after treatment with burned and unburned sugarcane straw leachate. Unburned straw leachate significantly inhibited root elongation of 7-d-old beggarticks and wild mustard seedlings. Burned straw leachate did not affect seedling growth of the assayed weeds suggesting that organic straw phytotoxins were involved. Experiments with activated charcoal, however, did not provide clear evidence supporting the involve of organic molecules in straw phytotoxicity. Unburned straw leachate incorporated in biotic soil was more inhibitory than in abiotic soil on root growth suggesting that microbial activity is involved in sugarcane straw interference. There was no evidence of nutrient microbial immobilization. Unburned sugarcane straw leachate increased total phenolic content in biotic soil more than in abiotic soil or biotic soil plus charcoal. Burned sugarcane straw leachate did not increase phenolic compounds levels in biotic soil. Linear regression analysis indicated a strong correlation between levels of soil phenolic contents and root growth inhibition. Soil characteristics evaluated in soil treated with burned and unburned sugarcane straw leachate suggest that straw phytotoxicity is related with organic molecules, such as phenolic compounds, rather than to variations in inorganic nutrients. Unburned straw leachate induced proline accumulation in seedling leaves of both beggarticks and wild mustard. Proline foliar content was higher in seedlings grown in biotic soil than in seedlings grown in biotic soil plus charcoal suggesting that straw organic constituents induced proline accumulation. Proline foliar content of seedlings grown in biotic soil treated with burned straw leachate was not significantly different from water control. The present study showed that sugarcane straw leachate interferes with seedling growth of beggarticks and wild mustard and that water-soluble phenolics can play a role in the seedling growth inhibition of the assayed weeds.     

Differential phytotoxicity among species and cultivars of the genus Brassica to wheat

Classhouse and laboratory studies were conducted to investigate the effect of microorganisms on the activity of water-soluble phytotoxins from Brassica residues, and on the persistence of the phytotoxins. Warm temperatures (20–24°C) and long incubation periods (20 to 40 days) were conductive to reduced phytotoxicity while low temperatures (0–4°C, regardless of incubation time), or short incubation time (regardless of temperature) resulted in levels of phytotoxicity similar to that found without incubation. The removal of microbial populations by micro-filtration resulted in the maintenance of phytotoxicity, regardless of the incubation conditions. The quantity of residues or extracts from residues used in a pot experiment and the soil type (sand or clay soil) determined the degree of phytotoxicity. Generally, the greater the quantity of residues or extracts, the greater the toxicity, with residues being more toxic than extracts from the same rate of residue. These observations agree with the general literature that the level of toxicity is determined by the quantity of residue present, and the rate of decline in the toxicity of water-soluble toxins is dependent on the microbial populations present, and their level of activity.     

Effects of sulphur dioxide preservation of flax straw on fibre components and microbial colonisation during dew-retting

The changes in flax straw structure when treated with sulphur dioxide (SO₂) and consequent effect on dew-retting of the treated straw were investigated. The active oxoanions released by sulfurous acid degraded phenolics bound to the polysaccharides and lipids leading to an increase in water-soluble carbohydrates and polyphenols. As a result, proportions of hemicellulose, nitrogen, sulphur, ash and caustic weight loss were higher in treated straw while lipid was reduced. The coarseness of treated fibre was possibly caused by in situ dryback of the hydrolysed polysaccharides. The deposition of salts containing high concentrations of sulphur, calcium and potassium in the vicinity of the fibre bundles and epidermal layer was observed and investigated. In a dew-retting trial comprising SO₂-treated and untreated samples, the SO₂ treatment delayed microbial colonisation and, consequently, retting by nearly 2 wk compared to the controls. The changes in pH, fungal population and polysaccharide degrading enzymes were monitored. The differences in fibre yield, fineness and strength are presented.     

Localization of processes involved in methanogenic degradation of rice straw in anoxic paddy soil

In anoxic paddy soil, rice straw is decomposed to CH(4) and CO(2) by a complex microbial community consisting of hydrolytic, fermenting, syntrophic and methanogenic microorganisms. Here, we investigated which of these microbial groups colonized the rice straw and which were localized in the soil. After incubation of rice straw in anoxic soil slurries for different periods, the straw pieces were removed from the soil, and both slurry and straw were studied separately. Although the potential activities of polysaccharolytic enzymes were higher in the soil slurry than in the straw incubations, the actual release of reducing sugars was higher in the straw incubations. The concentrations of fermentation products, mainly acetate and propionate, increased steadily in the straw incubations, whereas only a little CH(4) was formed. In the soil slurries, on the other hand, fermentation products were low, whereas CH(4) production was more pronounced. The production of CH(4) or of fermentation products in the separated straw and soil incubations accounted in sum for 54-82% of the CH(4) formed when straw was not removed from the soil. Syntrophic propionate degradation to acetate, CO(2) and H(2) was thermodynamically more favourable in the soil than in the straw fraction. These results show that hydrolysis and primary fermentation reactions were mainly localized on the straw pieces, whereas the syntrophic and methanogenic reactions were mainly localized in the soil. The percentage of bacterial relative to total microbial 16S rRNA content was higher on the straw than in the soil, whereas it was the opposite for the archaeal 16S rRNA content. It appears that rice straw is mainly colonized by hydrolytic and fermenting bacteria that release their fermentation products into the soil pore water where they are further degraded to CH(4). Hence, complete methanogenic degradation of straw in rice soil seems to involve compartmentalization.     

Carbohydrate analysis of water-soluble uronic acid-containing polysaccharides with high-performance anion-exchange chromatography using methanolysis combined with TFA hydrolysis is superior to four other methods.

Sulfuric acid hydrolysis according to the Saeman procedure, TFA hydrolysis, and methanolysis combined with TFA hydrolysis were compared for the hydrolysis of water-soluble uronic acid-containing polysaccharides originating from fungi, plants, and animals. The constituent sugar residues released were subsequently analyzed by either conventional GLC analysis of alditol acetates or high-performance anion-exchange chromatography with pulsed-amperometric detection. It was shown that TFA hydrolysis alone is not sufficient for complete hydrolysis. Sulfuric acid hydrolysis of these polysaccharides resulted in low recoveries of 6-deoxy-sugar residues. Best results were obtained by methanolysis combined with TFA hydrolysis. Methanolysis with 2 M HCl prior to TFA hydrolysis resulted in complete liberation of monosaccharides from pectic material and from most fungal and animal polysaccharides tested. Any incomplete hydrolysis could be assessed easily by HPAEC, by the detection of characteristic oligomeric products, which is difficult using alternative methods currently in use. Methanolysis followed by TFA hydrolysis of 20 micrograms water-soluble uronic acid containing polysaccharides and subsequent analysis of the liberated sugar residues by HPAEC allowed us to determine the carbohydrate composition of these polysaccharides rapidly and accurately in one assay without the need for derivatization.     

A note on the formation of microbial polysaccharide from wheat straw decomposed in the absence of soil

C hapman , S.J. & L ynch , J.M. 1984. A note on the formation of microbial polysaccharide from wheat straw decomposed in the absence of soil. Journal of Applied Bacteriology 56 , 337–342.
The proportions of neutral sugars in fresh and decomposed wheat straw polysaccharide were similar, irrespective of the oxygen concentration used during breakdown. Polysaccharide extracted by hot water from the decomposed straw was composed mainly of galactose, glucose and mannose with smaller quantities of arabinose, xylose, rhamnose, fucose and ribose. The presence of these sugars indicates a mainly microbial origin for the polysaccharide but with some soluble hemi-cellulose breakdown products. The polysaccharide precipitable with 70% (v/v) ethanol accounted for 0.5% (w/w) of the degraded straw. The extracted polysaccharide was shown to increase the aggregate stability of Mount St Helens volcanic ash.     

Isolation and Fractionation of Water-soluble Polysaccharides from Bamboo Shoot

It was established that the water-soluble polysaccharides of bamboo shoot other than starch consisted of a water-soluble xylan, an arabinogalactan and an α-glucan by isolation and fractionation of the water-soluble polysaccharides extracted with dimethyl sulfoxide from a preparative meal of bamboo shoot. On the basis of the examination of several properties of these polysaccharides, the presence of a galactan first isolated from bamboo shoot was discussed from points of plant biogenesis.     

The effect of ammonia treatment on the solubilization of straw and the growth of cellulolytic rumen bacteria

Pre-treatment of straw with anhydrous ammonia increased its susceptibility to solubilization by the predominant cellulolytic bacteria from the rumen, Bacteroides succinogenes, Ruminococcus albus and R. flavefaciens. Ammonia treatment also increased the production of microbial protein and fermentation products by all three species. Scanning electron microscope observations of straw during digestion suggested that the attack of straw by these bacteria was accompanied by the formation of substantial numbers of adherent microcolonies.     

The effect of ammonia treatment on the solubilization of straw and the growth of cellulolytic rumen bacteria

Pre-treatment of straw with anhydrous ammonia increased its susceptibility to solubilization by the predominant cellulolytic bacteria from the rumen, Bacteroides succinogenes, Ruminococcus albus and R. flavefaciens. Ammonia treatment also increased the production of microbial protein and fermentation products by all three species. Scanning electron microscope observations of straw during digestion suggested that the attack of straw by these bacteria was accompanied by the formation of substantial numbers of adherent microcolonies.     

Effect of bioaugmentation and nitrogen supplementation on composting of paddy straw

A composting experiment was conducted to evaluate the effect of a hyperlignocellulolytic fungal consortium and different nitrogen amendments on paddy straw composting in terms of changes in physicochemical and biological parameters. A fungal consortium comprising four lignocellulolytic mesophilic fungal cultures was used as inoculum for bioaugmentation of paddy straw in perforated pits. The comparative effect of farmyard manure (FYM), soybean trash, poultry litter and urea on the composting process was evaluated at monthly intervals in terms of physicochemical (pH, EC, available P, C:N ratio and humus content) and biological (enzymatic and microbial activity) parameters. The compost prepared from bioaugmented paddy straw composting mixture, with poultry manure as nitrogen supplement attained desirable C:N ratio in 1 month and displayed least phytotoxicity levels along with higher production of β-1,4-Exoglucanase. The combined activity of the autochthonous composting microbiota as well as the externally applied fungal inoculum accelerated the composting process of paddy straw. Supplementation of paddy straw with poultry manure in 8:1 ratio was identified as the best treatment to hasten the composting process. This study highlights the importance of application of fungal inoculum and an appropriate N-amendment such as poultry manure for preparation of compost using a substrate having high C:N ratio, such as paddy straw.     

Pretreatment of wheat straw using combined wet oxidation and alkaline hydrolysis resulting in convertible cellulose and hemicellulose

The wet oxidation process of wheat straw has been studied as a pretreatment method to attain our main goal: To break down cellulose to glucose enzymatic, and secondly, to dissolve hemicellulose (e.g., for fermentation) without producing microbial inhibitors. Wet oxidation combined with base addition readily oxidizes lignin from wheat straw facilitating the polysaccharides for enzymatic hydrolysis. By using a specially constructed autoclave system, the wet oxidation process was optimized with respect to both reaction time and temperature. The best conditions (20 g/L straw, 170 degrees C, 5 to 10 min) gave about 85% w/w yield of converting cellulose to glucose. The process water, containing dissolved hemicellulose and carboxylic acids, has proven to be a direct nutrient source for the fungus Aspergillus niger producing exo-beta-xylosidase. Furfural and hydroxymethyl-furfural, known inhibitors of microbial growth when other pretreatment systems have been applied, were not observed following the wet oxidation treatment. (c) 1996 John Wiley & Sons, Inc.     

Carbohydrates of the brown seaweed Dictyota dichotoma

The fucose-containing polysaccharides of the brown alga Dictyota dichotoma were extracted with either trichloroacetic acid or HCl to give both water-soluble and water-insoluble materials. The latter had a high proportion (16 to 11%) of protein, and although all the sugars found in the water-soluble extracts were present, the major sugar in these water-insoluble polysaccharides was glucose. The water-soluble material extracted with HCl was a protein-free sulphated heteropolysaccharide. Complete removal of a glucan from the water-soluble extract was achieved by fractional precipitation with ethanol. The recovered glucan-free sulphated polysaccharide, which was rich in glucuronic acid, galactose, fucose and sulphate, showed high anticoagulating activity.     

Production of chondroitin sulfate and chondroitin

The production of microbial polysaccharides has recently gained much interest because of their potential biotechnological applications. Several pathogenic bacteria are known to produce capsular polysaccharides, which provide a protection barrier towards harsh environmental conditions, and towards host defences in case of invasive infections. These capsules are often composed of glycosaminoglycan-like polymers. Glycosaminoglycans are essential structural components of the mammalian extracellular matrix and they have several applications in the medical, veterinary, pharmaceutical and cosmetic field because of their peculiar properties. Most of the commercially available glycosaminoglycans have so far been extracted from animal sources, and therefore the structural similarity of microbial capsular polysaccharides to these biomolecules makes these bacteria ideal candidates as non-animal sources of glycosaminoglycan-derived products. One example is hyaluronic acid which was formerly extracted from hen crests, but is nowadays produced via Streptococci fermentations. On the other hand, no large scale biotechnological production processes for heparin and chondrotin sulfate have been developed. The larger demand of these biopolymers compared to hyaluronic acid (tons vs kilograms), due to the higher titre in the final product (grams vs milligrams/dose), and the scarce scientific effort have hampered the successful development of fermentative processes. In this paper we present an overview of the diverse applications and production methods of chondroitin reported so far in literature with a specific focus on novel microbial biotechnological approaches.     

Products of alkaline peroxide attack on wheat straw, oak, and kenaf

Wheat straw, oak, and kenaf were partially delignified by treatment with hydrogen peroxide at pH 11.0, and the water-soluble degradation products were characterized. Forty to sixty percent of the solubilized products were larger than 1000 molecular weight (MW), as determined by membrane ultrafiltration. Lignin degradation products in the low-molecular-weight fraction (<1000) consisted primarily of aromatic and aliphatic carboxylic acids.     

Phenolic substances as allelopathic agents arising during the degradation of rye (Secale cereale) tissues

Rye seedlings, tillering plants and crop residues were allowed to decompose in model incubation experiments. Young tissues gave rise to high concentrations of allelochemicals, whereas crop residues did not produce inhibitors. Seven phenolic acids were identified in the investigated materials; p-hydroxybenzoic protocatechuic, gallic, vanillic, syringic, p-coumaric, ferulic as well as benzoic acid. However, neither the level of these acids nor the total content of phenolic compounds corresponded to the level of phytotoxicity determined in bioassays. This demonstrated that, apart from phenolics, other unidentified water-soluble organic compounds were also responsible for the toxicity of rye decomposition products. The study was conducted within program CPBP 04.10.03. The study was conducted within program CPBP 04.10.03.     

Microcalorimetric study of pretreatment of straw

Summary Anaerobic microbial decomposition of straw samples is investigated by microcalorimetry and g.c. analysis of the metabolic products. Interaction between the endogenous flora of the straw and the added inoculum is considered. The effects of (KOH) pretreatments (0.25 - 0.5 - 1 m) and of the resulting salt were estimated by the fermentation products and microcalorimetry.     

Microbial necromass in cropland soils: A global meta-analysis of management effects

Microbial necromass is a large and persistent component of soil organic carbon (SOC), especially under croplands. The effects of cropland management on microbial necromass accumulation and its contribution to SOC have been measured in individual studies but have not yet been summarized on the global scale. We conducted a meta-analysis of 481-paired measurements from cropland soils to examine the management effects on microbial necromass and identify the optimal conditions for its accumulation. Nitrogen fertilization increased total microbial necromass C by 12%, cover crops by 14%, no or reduced tillage (NT/RT) by 20%, manure by 21%, and straw amendment by 21%. Microbial necromass accumulation was independent of biochar addition. NT/RT and straw amendment increased fungal necromass and its contribution to SOC more than bacterial necromass. Manure increased bacterial necromass higher than fungal, leading to decreased ratio of fungal-to-bacterial necromass. Greater microbial necromass increases after straw amendments were common under semi-arid and in cool climates in soils with pH <8, and were proportional to the amount of straw input. In contrast, NT/RT increased microbial necromass mainly under warm and humid climates. Manure application increased microbial necromass irrespective of soil properties and climate. Management effects were especially strong when applied during medium (3–10 years) to long (10+ years) periods to soils with larger initial SOC contents, but were absent in sandy soils. Close positive links between microbial biomass, necromass and SOC indicate the important role of stabilized microbial products for C accrual. Microbial necromass contribution to SOC increment (accumulation efficiency) under NT/RT, cover crops, manure and straw amendment ranged from 45% to 52%, which was 9%–16% larger than under N fertilization. In summary, long-term cropland management increases SOC by enhancing microbial necromass accumulation, and optimizing microbial necromass accumulation and its contribution to SOC sequestration requires site-specific management.     

Carbohydrate Accumulation in Siberian Spruce Needles of Various Ages

The content of mono- and oligosaccharides, hemicelluloses, and water-soluble polysaccharides was studied in Siberian spruce (Picea obovata Ledeb.) needles of various ages. Accumulation of carbohydrates during the growth period and the ratio of their individual fractions were determined by the proportions between the growth rate and assimilate export in developing needles. Throughout the growth period, the content of monosaccharides in needles of all ages was much higher than that of oligosaccharides. Unlike the period of active growth, the dormancy period was characterized by a wider diversity of oligosaccharides and their rather high content. Hemicelluloses that accumulated during the previous growth season and water-soluble polysaccharides of 2- and 3-year-old needles were involved into metabolism at the time of active growth of current-year needles. Analysis of carbohydrate accumulation in 1- to 9-year-old needles showed that the monosaccharide concentration was higher in needles of the first two years. The content of hemicelluloses A and B and water-soluble polysaccharides was higher in older needles. During the growth period, the assimilates of 2- and 3-year-old needles were partly used for the formation of young needles. The increase in relative content of polysaccharides during needle senescence reflects the involvement of photosynthetic products into the secondary pool of carbon metabolites.     

Study on binding of REEs with water-soluble polysaccharides in fern

The binding of rare earth elements (REEs) with water-soluble polysaccharides of nondeproteinization and deproteinization in the leaves of the fernDicranopteris dichotoma was studied by molecular activation analysis (MAA). Two cold-water-soluble polysaccharides (extracted by 75% ethanol and 90% ethanol, respectively) and one hot-water-soluble polysaccharide (extracted by 90% ethanol) were separated using biochemical separation techniques. The eight rare earth elements (La, Ce, Nd, Sm, Eu, Tb, Yb, and Lu) in these polysaccharides were determined by instrumental neutron activation analysis. Our new results showed that the REEs were bound firmly with the water-soluble polysaccharides in the plant, regardless of whether nondeproteinization or deproteinization was used. The molecular-weight (MW) measurement demonstrated that REEs were mainly bound with low-MW (10,000–20,000) polysaccharides.