NAD(P)H- and superoxide-dependent nitric oxide degradation by rat liver mitochondria

Mitochondria consume nitric oxide (NO) mainly through reaction with superoxide anion (). Here, we analyzed the sources for NO degradation by isolated rat liver mitochondria. Electron leakage from complex III and reverse electron transport to complex I accounted for -dependent NO degradation by mitochondria in the presence of a protonmotive force. Mitochondria incubated with NAD(P)H also presented intense generation and NO degradation rates that were insensitive to respiratory inhibitors and abolished after proteinase treatment. These results suggest that an outer membrane-localized NAD(P)H oxidase activity, in addition to the electron leakage from the respiratory chain, promotes -dependent NO degradation in rat liver mitochondria.     

Light and nutrient availability affect the size-scaling of growth in phytoplankton

Communities of marine phytoplankton consist of cells of many different sizes. The size-structure of these communities often varies predictably with environmental conditions in aquatic systems. It has been hypothesized that physiological differences in nutrient and light requirements and acquisition efficiencies contribute to commonly observed correlations between phytoplankton community size structure and resource availability. Using physiological models we assess how light and nutrient availability can alter the relative growth rates of phytoplankton species of different cell sizes. Our models predict a change in the size dependence of growth rate depending on the severity of limitation by light and nutrient availability. Under conditions of growth-saturated resource supply, phytoplankton growth rate (mol C ) scales with cell volume with a size-scaling exponent of ; light limitation reduces the size-scaling exponent to approximately , and nutrient limitation decreases the exponent to as a consequence of the size-scaling of resource acquisition. Exponents intermediate between and occur under intermediate availability of light and nutrients and depend on the size-scaling of pigment photoacclimation and the size range examined.     

A trade-off relationship between energetic cost and entropic cost for in vitro evolution

In this paper, we consider two complementary cost functions for the landscape exploring processes to obtain the global optimum sequence through in vitro evolution protocol: one is the entropic cost C_etp, which is based on the deviation from the uniformity of a mutant distribution in sequence space, and the other is the energetic cost C_eng, which is based on the total number of sequences to be generated and evaluated. Based on a prior knowledge about the structure of a given fitness landscapes, the conductor of the experiment can think up the efficient search algorithm (ESA), which requires the minimum number of points (=sequences) to be searched up to the global optimum. For five typical fitness landscapes, we considered their respective (putative) ESA, and based on the ESA. As a result, we found a trade-off relationship between and for every case, that is, is approximately equal to the logarithm of the volume of the sequence space. and are interpreted in terms of the information-theoretic concepts.     

Physicochemical effects enhance surfactant transport in pulsatile motion of a semi-infinite bubble

In this study, we investigate the sorption of pulmonary surfactant (Infasurf, Ony, Buffalo, NY) occurring at the air-liquid interface of a semi-infinite finger of air as it oscillates and progresses along a small rigid tube () occluded with a surfactant-doped solution of concentrations . This simple experimental model of pulmonary airway reopening is designed to examine how altering the fluid flow field may lower reopening pressures and lead to a reduction in airway wall damage that is associated with the mechanical ventilation of an obstructed pulmonary system in airways of the deep lung with depleted endogenous and little exogenous surfactant. We analyzed a range of pulsatile flow scenarios by varying the oscillation frequency (), the oscillation flow waveform, and the steady flow rate (). These experimental studies indicate that a high frequency (1 Hz, amplitude = 5 mm), fast-forward oscillation waveform superimposed onto a fast steady flow () substantially reduces mean reopening pressures (31%) as a consequence of the modified flow field and the commensurate increase in surfactant transport and adsorption. This result suggests that imposing high frequency, low amplitude oscillations during airway reopening will help to diminish ventilator-induced lung injury.     

Alkyl dehydrogenation in iridium tri-cyclopentyl phosphines

The iridium cyclooctadiene complex incorporating a tricyclopentyl phosphine ligand (PCyp₃), Ir(η²:η²-C₈H₁₂)(PCyp₃)Cl, has been prepared. Removal of the chloride from this complex using in CH₂Cl₂/arene solvent results in dehydrogenation (C-H activation followed by β-H transfer) of one of the alkyl phosphine rings and formation of the complexes (X = H, F) which contain a hybrid phosphine-alkene ligand. These complexes are formed alongside another product (5-20% yield) that has been identified as , which can be prepared in high yield by an alternative, and slightly modified, route. This complex is with a minor isomer that has been tentatively identified as , which results from allylic C-H activation of cyclooctadiene. Addition of H₂ to and its isomer in arene solvent (C₆H₅X, X = F, H) forms the dihydrido η⁶-arene Ir(III) complexes . In contrast, hydrogenation in CH₂Cl₂ alone results in the formation of in which the anion is now acting as a ligand through one of its aryl rings. The fluorobenzene complex can be cleanly converted to by addition of the hydrogen acceptor tert-butylethene (tbe).     

Novel structural variation of silver(I)-pyridine complexes in nitromethane as studied by X-ray absorption spectroscopy

The XAFS spectra were measured at around the Ag K-edge of the Ag(I) ion in nitromethane (NM) with a variety of concentrations of pyridine (PY). In NM without PY, the Ag(I) ion is tetrahedrally solvated by four NM molecules similar to those in most solvents. The Ag-O bond length in NM solvent is longer than that in aqueous solution, indicating the low donating ability of NM. The mono-, bis-, tris-, and tetrakis-pyridine complexes are formed in NM by the addition of PY. The EXAFS analyses reveal that the structure of the formed PY complex in NM is linear for Ag(py)(nm)⁺, linear for , triangular for , and tetrahedral for . The longer Ag-O bond length for Ag(py)(nm)⁺ than that for and the release of bound NM molecules at the formation of Ag(py)(nm)⁺ are interpreted to be due to the strong σ donating property of PY. The Ag-N bond length (220 pm) for is intermediate between 216 pm for and 228 pm for . The formation equilibria of and are analyzed on the basis of the changeover of EXAFS spectra as a function of the total concentrations of Ag⁺ and PY in NM.     

Photocatalysis of chloroform degradation by μ-dichlorotetrachlorodipalladate(II)

Unlike other chlorometallate complexes that catalyze the photodecomposition of haloalkanes through photodissociation of a chlorine atom, both and catalyze chloroform decomposition through a process that appears to involve C-H bond breakage from an excited state association complex with chloroform. This would account for the greatly retarded rate of decomposition in CDCl₃ and for the generation of CCl₄ as a side product. In chloroform, and are in slow equilibrium with each other. The rate for the conversion of - in chloroform at 23 °C obeys the expression (0.03 M⁻¹ s⁻¹) [][Cl⁻]. The equilibrium constant, K = [][Cl⁻]²/[]², was estimated to be 3 × 10⁻³ M in CHCl₃.     

Dinuclear gold(III) pyrazolato complexes - Synthesis, structural characterization and transformation to their trinuclear gold(I) and gold(I/III) analogues

The reaction of AuCl₃py with Na(pz∗) (pz∗ = pyrazolato, or substituted pyrazolato anion) yields stable dinuclear [cis-Au^IIICl₂(μ-pz∗)]₂ complexes. In the presence of a base, the latter undergo reduction with concomitant transformation of the dinuclear -structure to trinuclear Au^I, Au^III (containing trans Au^IIICl₂-centres) and species.     

The BK channel accessory β1 subunit determines alcohol-induced cerebrovascular constriction

Ethanol-induced inhibition of myocyte large conductance, calcium- and voltage-gated potassium (BK) current causes cerebrovascular constriction, yet the molecular targets mediating EtOH action remain unknown. Using BK channel-forming (cbv1) subunits from cerebral artery myocytes, we demonstrate that EtOH potentiates and inhibits current at lower and higher than ∼15 μM, respectively. By increasing cbv1’s apparent -sensitivity, accessory BK β₁ subunits shift the activation-to-inhibition crossover of EtOH action to <3 μM , with consequent inhibition of current under conditions found during myocyte contraction. Knocking-down KCNMB1 suppresses EtOH-reduction of arterial myocyte BK current and vessel diameter. Therefore, BK β₁ is the molecular effector of alcohol-induced BK current inhibition and cerebrovascular constriction.     

Intracellular anion fluorescence assay for sodium/iodide symporter substrates

The sodium/iodide symporter (NIS) is primarily responsible for iodide accumulation in the thyroid gland for the synthesis of thyroid hormones; however, it can also transport other lyotropic anions in the thyroid gland and nonthyroid tissues. Some NIS substrates have important physiological or clinical roles, and others are environmental contaminants with health-related consequences. The aim of this study was to assess the utility of a yellow fluorescent protein variant, YFP–H148Q/I152L, as a biosensor to monitor the cellular uptake of NIS substrates, including thiocyanate (SCN⁻), nitrate (), chlorate (), perchlorate (), and perrhenate (). The fluorescence of purified YFP–H148Q/I152L was suppressed by anions with an order of potency of > = I⁻ = SCN⁻ = > ? Cl⁻. Anions also suppressed the fluorescence of YFP–H148Q/I152L expressed in FRTL-5, a thyroid cell line with high NIS expression. Quantitation of intracellular concentrations revealed differences among anions in the affinity and maximal velocity of NIS-mediated uptake as well as in the rate constant for passive efflux. These results suggest that YFP–H148Q/I152L can serve as an intracellular biosensor of NIS-transported anions and may be useful to study the physiology of endogenous anions as well as the health-related consequences of environmental anions.     

Reactive oxygen and nitrogen species regulate inducible nitric oxide synthase function shifting the balance of nitric oxide and superoxide production

Inducible NOS (iNOS) is induced in diseases associated with inflammation and oxidative stress, and questions remain regarding its regulation. We demonstrate that reactive oxygen/nitrogen species (ROS/RNS) dose-dependently regulate iNOS function. Tetrahydrobiopterin (BH₄)-replete iNOS was exposed to increasing concentrations of ROS/RNS and activity was measured with and without subsequent BH₄ addition. Peroxynitrite (ONOO⁻) produced the greatest change in NO generation rate, ∼95% decrease, and BH₄ only partially restored this loss of activity. Superoxide () greatly decreased NO generation, however, BH₄ addition restored this activity. Hydroxyl radical (OH) mildly decreases NO generation in a BH₄-dependent manner. iNOS was resistant to H₂O₂ with only slightly decreased NO generation with up to millimolar concentrations. In contrast to the inhibition of NO generation, ROS enhanced production from iNOS, while ONOO⁻ had the opposite effect. Thus, ROS promote reversible iNOS uncoupling, while ONOO⁻ induces irreversible enzyme inactivation and decreases both NO and production.     

Effect of magnesium chloride (2:1 electrolyte) on the aqueous solution behavior of some saccharides over the temperature range of 288.15-318.15 K: a volumetric approach

Infinite-dilution standard partial molar volumes, , for various mono-, di-, and trisaccharides, and their derivatives (methyl glycosides) at molalities ranging from 0.04 to 0.12 mol kg⁻¹ in aqueous solutions of magnesium chloride of 0.5, 1.0, 2.0, and 3.0 mol kg⁻¹, have been evaluated over a range of temperatures from 288.15 to 318.15 K by density measurements employing a vibrating-tube densimeter. These data have been utilized to determine the corresponding standard partial molar volumes of transfer, , of saccharides and methyl glycosides from water to aqueous magnesium chloride solutions. The values have been found to be positive, and their magnitudes increase with an increasing concentration of magnesium chloride in all cases. Partial molar expansion coefficients, and second derivatives thereof, have been estimated. The magnitude of values increases with an increase in temperature, indicating that hydration effects in solutions are strongly sensitive to temperature. Pair and higher order volumetric interaction coefficients (V_AB, V_ABB) have also been obtained from values by using the McMillan-Mayer theory. The various parameters have been discussed in terms of the solute (saccharide or methyl glycoside)-co-solute (magnesium chloride) interactions and are thus used to understand the mixing effects due to these interactions. These results have been compared with those earlier reported in the presence of electrolytes. An attempt is made to interpret the volumetric properties data in terms of the stereochemistry of the solutes.