Geographical ecology of dry forest tree communities in the West Indies

Aim

Seasonally dry tropical forest (SDTF) of the Caribbean Islands (primarily West Indies) is floristically distinct from Neotropical SDTF in Central and South America. We evaluate whether tree species composition was associated with climatic gradients or geographical distance. Turnover (dissimilarity) in species composition of different islands or among more distant sites would suggest communities structured by speciation and dispersal limitations. A nested pattern would be consistent with a steep resource gradient. Correlation of species composition with climatic variation would suggest communities structured by broad‐scale environmental filtering.

Location

The West Indies (The Bahamas, Cuba, Hispaniola, Jamaica, Puerto Rico, US Virgin Islands, Guadeloupe, Martinique, St. Lucia), Providencia (Colombia), south Florida (USA) and Florida Keys (USA).

Taxon

Seed plants—woody taxa (primarily trees).

Methods

We compiled 572 plots from 23 surveys conducted between 1969 and 2016. Hierarchical clustering of species in plots, and indicator species analysis for the resulting groups of sites, identified geographical patterns of turnover in species composition. Nonparametric analysis of variance, applied to principal components of bioclimatic variables, determined the degree of covariation in climate with location. Nestedness versus turnover in species composition was evaluated using beta diversity partitioning. Generalized dissimilarity modelling partitioned the effect of climate versus geographical distance on species composition.

Results

Despite a set of commonly occurring species, SDTF tree community composition was distinct among islands and was characterized by spatial turnover on climatic gradients that covaried with geographical gradients. Greater Antillean islands were characterized by endemic indicator species. Northern subtropical areas supported distinct, rather than nested, SDTF communities in spite of low levels of endemism.

Main conclusions

The SDTF species composition was correlated with climatic variation. SDTF on large Greater Antillean islands (Hispaniola, Jamaica and Cuba) was characterized by endemic species, consistent with their geological history and the biogeography of plant lineages. These results suggest that both environmental filtering and speciation shape Caribbean SDTF tree communities.     

Change within and among forest communities: the influence of historic disturbance,environmental gradients,and community attributes

Understanding how ecological communities change over time is critical for biodiversity conservation, but few long‐term studies directly address decadal‐scale changes in both the within‐ and among‐community components of diversity. In this study, we use a network of permanent forest vegetation plots, established in Great Smoky Mountains National Park (USA) in 1978, to examine the factors that influence change in community composition within and among communities. In 2007, we resampled 15 plots that were logged in the late 1920s and 15 plots that had no documented history of intensive human disturbance. We found that understory species richness decreased by an average of 4.3 species over the 30‐yr study period in the logged plots, but remained relatively unchanged in the unlogged plots. In addition, tree density decreased by an average of 145 stems ha^?1 in the logged plots, but was relatively stable in the unlogged plots. However, we found that historic logging had no effect on within‐community understory or tree compositional turnover during this time period. Instead, sites at lower elevations and sites with lower understory biomass in 1978 had higher understory compositional turnover than did sites at higher elevations and sites with higher understory biomass. In addition, sites with lower soil cation exchange capacity (CEC) and with lower tree basal area in 1978 had higher tree compositional turnover than did sites with higher soil CEC and higher tree basal area. Among‐community similarity was unchanged from 1978 to 2007 for both the logged and unlogged plots. Overall, our results indicate that human disturbance can affect plant communities for decades, but the extent of temporal change in community composition may nevertheless depend more on environmental gradients and community attributes.     

Tree diversity and phytogeographical patterns of tropical high mountain rain forests in Central Sulawesi,Indonesia

Tropical high mountain forests in Lore Lindu National Park, Sulawesi, Indonesia, were described by their floristic composition and the importance of tree families (Family importance values, FIV), based on tree inventories conducted on 4 plots (each 0.24 ha) in old-growth forest stands at c. 1800 and 2400 m a.s.l. (mid- and upper montane elevations). To identify general patterns and regional peculiarities of the forests in the SE Asian and SW Pacific context, the biogeography of the tree species was analysed using distribution records. Out of the total of 87 tree species, only 18 species were found at both elevational zones. The discovery of new species and new distribution records (28% of the data set) highlights the deficiencies in the taxonomic and distribution data for Sulawesi. Sulawesi endemism rate was 20%. In the mid-montane Fagaceae–Myrtaceae forests, Lithocarpus spp. (Fagaceae) were overall important (4 spp. occupying around half of the total basal area) and the Myrtaceae the most species rich (8 spp.), thus showing typical features of Malesian montane forests. The upper montane conifer-Myrtaceae forest contained several high mountain tree taxa and showed affinity to the forests of New Guinea. The mountain flora comprised both eastern and western Malesian elements, with the nearest neighbouring islands Borneo and Maluku both sharing species with Sulawesi, reflecting the complex palaeogeography of the island. A separate analysis showed the mid-montane forest to possess greatest biogeographical affinity to Borneo/western Malesia, and the upper montane forest had a number of typical elements of Papuasia/eastern Malesia and the Phillipines, which may be a result of historical patterns in land connection and the emergence of mountain ranges.     

Substantial reorganization of China's tropical and subtropical forests: based on the permanent plots

There is evidence that climate change induced tree mortalities in boreal and temperate forests and increased forest turnover rates (both mortality and recruitment rates) in Amazon forests. However, no study has examined China's tropical and subtropical evergreen broadleaved forests (TEBF) that cover >26% of China's terrestrial land. The sustainability of this biome is vital to the maintenance of local ecosystem services (e.g., carbon sequestration, biodiversity conservation, climatic regulation), many of which may influence patterns of atmospheric circulation and composition at regional to global scales. Here, we analyze time‐series data collected from thirteen permanent plots within China's unmanaged TEBF to study whether and how this biome has changed over recent decades. We find that the numbers of individuals and species for shrub and small tree have increased since 1978, whereas the numbers of individuals and species for tree have decreased over this same time period. The shift in species composition is accompanied by a decrease in the mean diameter at breast height (DBH) for all individuals combined. China's TEBF may thereby be transitioning from cohorts of fewer and larger individuals to ones of more and smaller individuals, which shows a unique change pattern differing from the documented. Regional‐scale drying is likely responsible for the biome's reorganization. This biome‐wide reconstitution would deeply impact the regimes of carbon sequestration and biodiversity conservation and have implications for the sustainability of economic development in the area.     

Influence of soils and topography on Amazonian tree diversity: a landscape‐scale study

Question: How do soils and topography influence Amazonian tree diversity, a region with generally nutrient‐starved soils but some of the biologically richest tree communities on Earth? Location: Central Amazonia, near Manaus, Brazil. Methods: We evaluated the influence of 14 soil and topographic features on species diversity of rain forest trees (≥10 cm diameter at breast height), using data from 63 1‐ha plots scattered over an area of ～400 km². Results: An ordination analysis identified three major edaphic gradients: (1) flatter areas had generally higher nutrient soils (higher clay content, carbon, nitrogen, phosphorus, pH and exchangeable bases, and lower aluminium saturation) than did slopes and gullies; (2) sandier soils had lower water storage (plant available water capacity), phosphorus and nitrogen; and (3) soil pH varied among sites. Gradient 2 was the strongest predictor of tree diversity (species richness and Fisher's α values), with diversity increasing with higher soil fertility and water availability. Gradient 2 was also the best predictor of the number of rare (singleton) species, which accounted on average for over half (56%) of all species in each plot. Conclusions: Although our plots invariably supported diverse tree communities (≥225 species ha^?1), the most species‐rich sites (up to 310 species ha^?1) were least constrained by soil water and phosphorus availability. Intriguingly, the numbers of rare and common species were not significantly correlated in our plots, and they responded differently to major soil and topographic gradients. For unknown reasons rare species were significantly more frequent in plots with many large trees.     

Tree communities and soil properties influence fungal community assembly in neotropical forests

The influence exerted by tree communities, topography, and soil chemistry on the assembly of macrofungal communities remains poorly understood, especially in highly diverse tropical forests. Here, we used a large dataset that combines inventories of macrofungal Basidiomycetes fruiting bodies, tree species composition, and measurements for 16 soil physicochemical parameters, collected in 34 plots located in four sites of lowland rain forests in French Guiana. Plots were established on three different topographical conditions: hilltop, slope, and seasonally flooded soils. We found hyperdiverse Basidiomycetes communities, mainly comprising members of Agaricales and Polyporales. Phosphorus, clay contents, and base saturation in soils strongly varied across plots and shaped the richness and composition of tree communities. The latter composition explained 23% of the variation in the composition of macrofungal communities, probably through high heterogeneity of the litter chemistry and selective effects of biotic interactions. The high local heterogeneity of habitats influenced the distribution of both macrofungi and trees, as a result of diversed local soil hydromorphic conditions associated with contrasting soil chemistry. This first regional study across habitats of French Guiana forests revealed new niches for macrofungi, such as ectomycorrhizal ones, and illustrates how macrofungi inventories are still paramount to can be to understand the processes at work in the tropics. Abstract in Spanish is available with online material.     

Variation in floristic and trait composition along environmental gradients in the herb layer of temperate forests in the transition zone between Central and SE Europe

Species- and trait-environment linkages in forest plant communities continue to be a frequent topic in ecological research. We studied the dependence of floristic and functional trait composition on environmental factors, namely local soil properties, overstory characteristics, climatic parameters and other abiotic and biotic variables. The study area comprised 50 monitoring plots across Slovenia, belonging to the EU ICP Forests monitoring network. Vegetation was surveyed in accordance with harmonized protocols, and environmental variables were either measured or estimated during vegetation sampling. Significant predictors of species composition were identified by canonical correspondence analysis. Correlations between plant traits, i.e. plant growth habit, life form, flowering features and CSR signature, were examined with fourth-corner analysis and linear regressions. Our results show that variation in floristic composition was mainly explained by climatic parameters (mean annual temperature, mean annual precipitation), soil properties (pH) and tree layer-dependent light conditions. Trait composition was most closely related with tree layer characteristics, such as shade-casting ability (SCA, a proxy for light availability in the understory layer), tree species richness and tree species composition. Amongst soil properties, total nitrogen content and soil texture (proportion of clay) were most frequently correlated with different species traits or trait states. The CSR signature of herb communities was associated with tree layer SCA, soil pH and mean annual temperature. The floristic composition of the studied herb-layer vegetation depended on temperature and precipitation, which are likely to be influenced by ongoing climate change (warming and drying). Trait composition exhibited significant links to tree layer characteristics and soil conditions, which are in turn directly modified by forest management interventions.

     

An ecoregion assessment of projected tree species vulnerabilities in western North America through the 21st century

Forest ecosystems across western North America will likely see shifts in both tree species dominance and composition over the rest of this century in response to climate change. Our objective in this study was to identify which ecological regions might expect the greatest changes to occur. We used the process‐based growth model 3‐PG, to provide estimates of tree species responses to changes in environmental conditions and to evaluate the extent that species are resilient to shifts in climate over the rest of this century. We assessed the vulnerability of 20 tree species in western North America using the Canadian global circulation model under three different emission scenarios. We provided detailed projections of species shifts by including soil maps that account for the spatial variation in soil water availability and soil fertility as well as by utilizing annual climate projections of monthly changes in air temperature, precipitation, solar radiation, vapor pressure deficit and frost at a spatial resolution of one km. Projected suitable areas for tree species were compared to their current ranges based on observations at >40 000 field survey plots. Tree species were classified as vulnerable if environmental conditions projected in the future appear outside that of their current distribution ≥70% of the time. We added a migration constraint that limits species dispersal to <200 m yr^?1 to provide more realistic projections on species distributions. Based on these combinations of constraints, we predicted the greatest changes in the distribution of dominant tree species to occur within the Northwest Forested Mountains and the highest number of tree species stressed will likely be in the North American Deserts. Projected climatic changes appear especially unfavorable for species in the subalpine zone, where major shifts in composition may lead to the emergence of new forest types.     

Peatland forests are the least diverse tree communities documented in Amazonia,but contribute to high regional beta‐diversity

Western Amazonia is known to harbour some of Earth's most diverse forests, but previous floristic analyses have excluded peatland forests which are extensive in northern Peru and are among the most environmentally extreme ecosystems in the lowland tropics. Understanding patterns of tree species diversity in these ecosystems is important both for quantifying beta‐diversity in this region, and for understanding determinants of diversity more generally in tropical forests. Here we explore patterns of tree diversity and composition in two peatland forest types – palm swamps and peatland pole forests – using 26 forest plots distributed over a large area of northern Peru. We place our results in a regional context by making comparisons with three other major forest types: terra firme forests (29 plots), white‐sand forests (23 plots) and seasonally‐flooded forests (11 plots). Peatland forests had extremely low (within‐plot) alpha‐diversity compared with the other forest types that were sampled. In particular, peatland pole forests had the lowest levels of tree diversity yet recorded in Amazonia (20 species per 500 stems, Fisher's alpha 4.57). However, peatland pole forests and palm swamps were compositionally different from each other as well as from other forest types in the region. Few species appeared to be peatland endemics. Instead, peatland forests were largely characterised by a distinctive combination of generalist species and species previously thought to be specialists of other habitats, especially white‐sand forests. We suggest that the transient nature and extreme environmental conditions of Amazonian peatland ecosystems have shaped their current patterns of tree composition and diversity. Despite their low alpha‐diversity, the unique combination of species found in tree communities in Amazonian peatlands augment regional beta‐diversity. This contribution, alongside their extremely high carbon storage capacity and lack of protection at national level, strengthens their status as a conservation priority.     

喀斯特土壤固氮微生物群落与植被、土壤的关系

固氮微生物作为土壤中重要的功能微生物群之一,其与地上植物群落、土壤环境之间的关系尚不清楚。在桂西北的环江县、都安县和大化县选取喀斯特典型植被类型(草丛、灌丛、次生林)建立样方,通过植被调查、测定土壤理化性质和构建克隆文库的方法,研究了土壤固氮微生物群落的结构与组成,分析了固氮微生物群落与植物群落、土壤理化性质之间的关系。结果表明:研究区典型植被类型土壤中的优势固氮微生物为慢生根瘤菌。Mantel相关性分析表明植物群落与固氮微生物群落显著相关(r=0.6116,P=0.011);结合PCo A分析和Venn图可看出,植物群落组成与结构越相似,土壤固氮微生物群落结构与组成也越相似。CCA分析前两轴的解释率之和仅为22.72%,其中总氮、有效态钾、有效态钙对固氮微生物群落的影响显著,这表明本研究涵盖的土壤理化性质指标并不能完全解释固氮微生物群落的变异,需要补充更多的土壤数据进行更深入的研究。由此可见,在喀斯特生态恢复过程中,不仅要关注地上植被群落的恢复与重建,同时也应重视地下功能微生物群落的恢复与重建。     

Environmental,Spatial and Structural Components in the Composition of Mountain Forest in the Bavarian Alps

A combined systematic and stratified sampling design was conducted in mountain forests of the Bavarian Alps to find the principal dimensions of compositional variation of vegetation and their environmental drivers. In 1,505 plots species composition, forest types and soil profiles were recorded. Data from 14 climate stations were included. As we hypothesized that the tree layer is more influenced by management than the understorey and that the former modifies the habitat of the latter, the two matrices were analysed separately and the species composition of the tree layer was used as a structural predictor variable for the understorey. We applied constrained ordination to reveal the main gradients in floristic composition and variance partitioning to examine the portions of climatic, edaphic, spatial and structural components. Ellenberg indicator values and a generalized linear model were used to test whether a significant spatial gradient exists from east to west, the main spatial extent of the investigation area. Forest types were used as an overlay to assess the underlying environmental factors. It turned out that explained variance of the tree layer was considerably lower than in the understorey. Tree layer composition was more influenced by climatic variables than by soil. In the understorey, edaphic and climatic variables contributed almost equally to explained variance, but the tree layer had an additional explanatory power. No continentality gradient could be detected within the investigation area. Plant communities were well separated along gradients of acidity, moisture, nutrients and climate, which broadly confirms the known gradients for montane and subalpine zonal forests in the region. The study provides a quantitative synthesis of the knowledge on a diverse set of community types, which has so far been subject to disparate and sectorial treatment in the Bavarian Alps.     

Resilient forest faunal communities in South Africa: a legacy of palaeoclimatic change and extinction filtering?

Aim To examine the influence of climatic extinction filtering during the last glacial maximum (LGM; c. 18,000 yr bp ) and of the subsequent recolonization of forest faunas on contemporary assemblage composition in southern African forests. Location South Africa, Mozambique, Swaziland, Zimbabwe. Methods Data comprised presence/absence by quarter‐degree grid cell for forest‐dependent and forest‐associated birds, non‐volant mammals and frogs. Twenty‐one forest subregions were assigned to one of three previously identified forest types: Afrotemperate, scarp, and Indian Ocean coastal belt. Differences among forest types were examined through patterns and gradients of species richness and endemism, assemblage similarity, species turnover, and coefficients of species dispersal direction. The influence of contemporary environment on assemblage composition was investigated using partial canonical correspondence analysis. Several alternative biogeographical hypotheses for the recolonization of forest faunas were tested. Results Afrotemperate faunas are relatively species‐poor, have low species turnover, and are unsaturated and infiltrated by generalist species. In northern and central regions, communities are supplemented by recolonization from scarp forest refugia, and among frogs by autochthanous speciation in localized refugia. Scarp faunas are relatively species‐rich, contain many forest‐dependent species, have high species turnover, and overlap with coastal and Afrotemperate faunas. Coastal forests are relatively species‐rich with high species turnover. Main conclusions Afrotemperate communities were affected most by climatic extinction filtering events. Scarp forests were Afrotemperate refugia during the LGM and are a contemporary overlap zone between Afrotemperate and coastal forest. Coastal faunas derive from post‐LGM colonization along the eastern seaboard from tropical East African refugia. The greatest diversity is achieved in scarp and coastal forest faunas in northern KwaZulu–Natal province. This historical centre of diversity has influenced the faunal diversity of nearly all other forests in South Africa. The response of vertebrate taxa to large‐scale, historical processes is dependent on their relative mobility: forest birds best illustrate patterns resulting from post‐glacial faunal dispersal, while among mammals and frogs the legacy of climatic extinction filtering remains stronger.     

High plant endemism in an Indian hotspot – eastern Himalaya

A preliminary investigation in the Subansiri area of the eastern Himalaya recorded high plant endemism. As a regular exercise of field sampling of various forest types to map the biorich areas, the number of species observed was evaluated to analyze their endemic status in one of the important hotspot regions of the world. The total number of individuals, species, genera and families observed were recorded in various natural and semi-natural forest types. A total of 122 plots sampled randomly in various forest types recorded 764 plant species, of which 59 were found to be endemic. The overall species endemism is observed to be 13 per ha. These 59 species belong to 27 families and 46 genera. Fifty percent of species were from just five families, Rubiaceae, Lauraceae, Acanthaceae, Magnoliaceae and Rosaceae. Stem size class distribution of the most abundantly found endemic tree species in three primary forest types indicated a quantitative status. This study envisages the status of plant endemism carried out following a proportional stratified random sampling method for various classified vegetation cover types using satellite remote sensing data. Many primitive genera and families were recorded which are indicative of long evolutionary age and affinities of the area with respect to species endemism.     

Effects of prescribed fire on the composition of woody plant communities in southeastern Texas

Abstract. The response to prescribed burning of plant communities ranging from dry to wet habitats was monitored using permanent plots sampled from 1989 to 1993. Temporal controls for fire effects were provided by matched sets of plots protected from fire by newly constructed fire breaks. Changes in species composition were studied by ordination of strata of trees (> 5 cm DBH), small trees (2–5 cm DBH), large saplings (1–2 cm DBH), and small saplings and seedlings (50–140 cm tall). Results show that changes occurred largely in the small tree stratum, in which xeric species increased in importance. Although there were changes in sapling and seedling strata, no clear direction of change was recognized. Fire had little effect on the tree stratum. Of the seven community types under study, three types, sandhill, upland pine, and upperslope pine-oak, were most strongly affected, as indicated by post-fire change in positions of samples representing these communities in ordination space and reduction in understory species abundance. Samples representing the other four mesic and wet communities showed little or no change in their positions. These short-term results indicate that changes in vegetation resulting from fire were small and were mostly restricted to the dry types in which possible compositional change is expected to occur. This differential effect of fire suggests that the influence of fire is secondary to that of topographical and soil gradients in determining vegetation pattern under current fire regimes. Fire seems to reinforce an overall vegetation gradient controlled by soil in southeastern Texas.     

Maritime climate influence on chaparral composition and diversity in the coast range of central California

We investigated the hypothesis that maritime climatic factors associated with summer fog and low cloud stratus (summer marine layer) help explain the compositional diversity of chaparral in the coast range of central California. We randomly sampled chaparral species composition in 0.1‐hectare plots along a coast‐to‐interior gradient. For each plot, climatic variables were estimated and soil samples were analyzed. We used Cluster Analysis and Principle Components Analysis to objectively categorize plots into climate zone groups. Climate variables, vegetation composition and various diversity measures were compared across climate zone groups using ANOVA and nonmetric multidimensional scaling. Differences in climatic variables that relate to summer moisture availability and winter freeze events explained the majority of variance in measured conditions and coincided with three chaparral assemblages: maritime (lowland coast where the summer marine layer was strongest), transition (upland coast with mild summer marine layer influence and greater winter precipitation), and interior sites that generally lacked late summer water availability from either source. Species turnover (β‐diversity) was higher among maritime and transition sites than interior sites. Coastal chaparral differs from interior chaparral in having a higher obligate seeder to facultative seeder (resprouter) ratio and by being dominated by various Arctostaphylos species as opposed to the interior dominant, Adenostoma fasciculatum. The maritime climate influence along the California central coast is associated with patterns of woody plant composition and β‐diversity among sites. Summer fog in coastal lowlands and higher winter precipitation in coastal uplands combine to lower late dry season water deficit in coastal chaparral and contribute to longer fire return intervals that are associated with obligate seeders and more local endemism. Soil nutrients are comparatively less important in explaining plant community composition, but heterogeneous azonal soils contribute to local endemism and promote isolated chaparral patches within the dominant forest vegetation along the coast.     

Delving into the dark ecology: A continent-wide assessment of patterns of composition in soil fungal communities from Australian tussock grasslands

Soil fungi play essential roles in many terrestrial processes, but our knowledge of the forces governing fungal distribution and community composition along broad-scale environmental gradients is still limited. In this study, we explored biogeographic distribution and composition of soil fungal communities associated with 62 tussock grasslands across different regions of Australia. Climatic parameters had only a limited correlation with fungal community structure, while edaphic variables and spatial distance were significantly associated with changes in fungal community composition. We also observed high variations in composition among fungal assemblages from different ecological regions, suggesting some regional endemism in these communities. The discrete distribution of fungi in soil was further confirmed by indicator analysis, which identified distinct indicator operational taxonomic units associated with grasslands from different climatic regions. Finally, fungi with flexible trophic interactions had a central role in the network architecture of both arid and temperate communities. Taken together, the results from our study confirm the prominent role of soil physico-chemical status and geographic location in determining fungal biogeographic patterns over large scales in Australia.     

Soil Bacterial Community Structure Responses to Precipitation Reduction and Forest Management in Forest Ecosystems across Germany

Soil microbial communities play an important role in forest ecosystem functioning, but how climate change will affect the community composition and consequently bacterial functions is poorly understood. We assessed the effects of reduced precipitation with the aim of simulating realistic future drought conditions for one growing season on the bacterial community and its relation to soil properties and forest management. We manipulated precipitation in beech and conifer forest plots managed at different levels of intensity in three different regions across Germany. The precipitation reduction decreased soil water content across the growing season by between 2 to 8% depending on plot and region. T-RFLP analysis and pyrosequencing of the 16S rRNA gene were used to study the total soil bacterial community and its active members after six months of precipitation reduction. The effect of reduced precipitation on the total bacterial community structure was negligible while significant effects could be observed for the active bacteria. However, the effect was secondary to the stronger influence of specific soil characteristics across the three regions and management selection of overstorey tree species and their respective understorey vegetation. The impact of reduced precipitation differed between the studied plots; however, we could not determine the particular parameters being able to modify the response of the active bacterial community among plots. We conclude that the moderate drought induced by the precipitation manipulation treatment started to affect the active but not the total bacterial community, which points to an adequate resistance of the soil microbial system over one growing season.     

Environmental filters shaping angiosperm tree assembly along climatic and geographic gradients

Question

Global‐scale forest censuses provide an opportunity to understand diversification processes in woody plant communities. Based on the climatic or geographic filtering hypotheses associated with tropical niche conservatism and dispersal limitation, we analysed phylogenetic community structures across a wide range of biomes and evaluated to what extent region‐specific processes have influenced large‐scale diversity patterns of tree species communities across latitude or continent.

Location

Global.

Methods

We generated a data set of species abundances for 21,379 angiosperm woody plants in 843 plots worldwide. We calculated net relatedness index (NRI) for each plot, based on a single global species pool and regional species pools, and phylogenetic β‐diversity (PBD) between plots. Then, we explored the correlations of NRI with climatic and geographic variables, and clarified phylogenetic dissimilarity along geographic and climatic differences. We also compared these patterns for South America, Africa, the Indo‐Pacific, Australia, the Nearctic, Western Palearctic and Eastern Palearctic.

Results

NRI based on a global‐scale species pool was negatively associated with precipitation and positively associated with Quaternary temperature change. PBD was positively associated with geographic distance and precipitation difference between plots across tropical and extratropical biomes. Moreover, phylogenetic dissimilarity was smaller in extratropical regions than in regions including the tropics, although temperate forests of the Eastern Palearctic showed a greater dissimilarity within extratropical regions.

Conclusions

Our findings support predictions of the climatic and geographic filtering hypotheses. Climatic filtering (climatic harshness and paleoclimatic change) relative to tropical niche conservatism played a role in sorting species from the global species pool and shaped the large‐scale diversity patterns, such as the latitudinal gradient observed across continents. Geographic filtering associated with dispersal limitation substantially contributed to regional divergence of tropical/extratropical biomes among continents. Old, long‐standing geographic barriers and recent climatic events differently influenced evolutionary diversification of angiosperm tree communities in tropical and extratropical biomes.     

Temporal variability in soil microbial communities across land-use types

Although numerous studies have investigated changes in soil microbial communities across space, questions about the temporal variability in these communities and how this variability compares across soils have received far less attention. We collected soils on a monthly basis (May to November) from replicated plots representing three land-use types (conventional and reduced-input row crop agricultural plots and early successional grasslands) maintained at a research site in Michigan, USA. Using barcoded pyrosequencing of the 16S rRNA gene, we found that the agricultural and early successional land uses harbored unique soil bacterial communities that exhibited distinct temporal patterns. α-Diversity, the numbers of taxa or lineages, was significantly influenced by the sampling month with the temporal variability in α-diversity exceeding the variability between land-use types. In contrast, differences in community composition across land-use types were reasonably constant across the 7-month period, suggesting that the time of sampling is less important when assessing β-diversity patterns. Communities in the agricultural soils were most variable over time and the changes were significantly correlated with soil moisture and temperature. Temporal shifts in bacterial community composition within the successional grassland plots were less predictable and are likely a product of complex interactions between the soil environment and the more diverse plant community. Temporal variability needs to be carefully assessed when comparing microbial diversity across soil types and the temporal patterns in microbial community structure can not necessarily be generalized across land uses, even if those soils are exposed to the same climatic conditions.     

Simulating forest succession along ecological gradients in southern Central Europe

Forest stand development was simulated using a forest succession model of the JABOWA/FORET type. The environmental conditions are representative for a wide spectrum of Swiss forest sites ranging from 220 m to 1 700 m a.s.l. Each model run covers a period of 1 200 yr and is based on the averaged successional characteristics of 50 forest plots with an individual size of 1/12 ha. These small forest plots serve as basic units to simulate establishment, growth, and death of individual trees of 29 species. Existing light in the forest stand, climatic conditions, soil properties, and other environmental factors control the growth of each individual tree. Compared with previous simulation studies, some major modifications were made, including the incorporation of the indicator values of Ellenberg (1979) to describe the ecophysiological behaviour of the species considered. As a test, the simulated species composition through time was compared with the actual vegetation and the potentially natural species composition on the corresponding site types. The extensive comparison revealed that approximately 80% of the simulations match the expected species configurations. Thus, it was concluded that the model is valid for the purpose of evaluating impacts of natural and human disturbances on forest communities.