Support from DNA data for a narrow species concept in Schistidium (Grimmiaceae,Musci)

Abstract

A study of ITS1 of 28 specimens of eight species of Schistidium from well-separated populations in Russia and northwest Europe revealed that there are very big differences between species (up to 16 substitutions and 256 indels), whereas within the species differences in DNA there are very few (none to four substitutions and none to six indels). These results strongly support the narrow species concept in Schistidium. Schistidium papillosum is represented by two quite distinct genotypes and probably needs further splitting.     

Deciphering species complexes: Puccinia andropogonis and Puccinia coronata, examples of differing modes of speciation

Species of macrocyclic, heteroecious grass rusts often have been defined with wide host ranges and variation in spore morphology. Consequently, some are species complexes and contain genetically distinct forms. Molecular analyses, together with morphological and biological methods, provide powerful means to dissect these complexes. Puccinia coronata is a complex species that has a broad telial host range including more than 45 genera of grasses and a narrow aecial host range. Phylogenetic analysis of nuclear ribosomal internal transcribed spacer (ITS) DNA sequences from 15 aecial and telial collections grouped P. coronata into six distinct clades supporting separation of this complex into four distinct species. Puccinia andropogonis, a common rust of tall prairie grasses in North America, is also a complex species. However, in contrast to P. coronata, P. andropogonis has a narrow telial host range and a broad aecial host range. DNA sequence analysis grouped 15 collections of P. andropogonis into six distinct clades representing at least four distinct species. Speciation of P. coronata appears to have occurred primarily by radiation onto new telial hosts, whereas in P. andropogonis speciation appears to have occurred primarily by radiation onto new aecial hosts.     

Philopotaminae of Madagascar (Trichoptera: Philopotamidae)

The Malagasy fauna includes two genera of Philopotaminae: Wormaldia McLachlan 1865 and an endemic new genus, Ranarijaodes n. gen. The Malagasy and African (sensu stricto) lineages of Wormaldia are distinct. Apomorphic characters (the shape of the phallic apparatus for the African species and the splitting of the median lobe of the tenth tergite for the Malagasy species) confirm their separation. New captures are reported for two of the four previously known species of Wormaldia. Seven new species are described: Wormaldia ambahibeae n. sp., W. faharoa n. sp., W. fahatelo n. sp., W. randriamasimananai n. sp., W. fahefatra n. sp., W. legrandi n. sp. and W. fahadimy n. sp. Ranarijaodes n. gen. is close to Dolophilodes Ulmer 1909. It is described for the three new species Ranarijaodes fiana n. sp., R. angapi n. sp. and R. atsimo n. sp. The 14 Malagasy species of Philopotaminae are endemics of the island. Their geographical distributions and ecological preferences are described and discussed.     

THE BARRED MINNOWS (TELEOSTEI: CYPRINIDAE) OF ZIMBABWE: IS THERE CAUSE FOR CONCERN?

Summary

Two species of barred minnow, Opsaridium zambezense and O. peringueyi, occur in Zimbabwe. The former is widely distributed in the Zambezi basin and some other rivers but is now absent from Lake Kariba and possibly some of its tributaries. The latter, which was only recently recognised as a distinct species and admitted to the Zimbabwean list, is much scarcer. It occurs in the Save and Limpopo catchments and there are only four specimens in the Natural History Museum of Zimbabwe collection. These specimens are all more than 40 years old and the lack of more recent ones suggest that O. peringueyi may be extinct, or close to extinction, in Zimbabwe. This situation may have come about through habitat alteration and drought, and emphasises the need for further monitoring of the current occurrence/distribution of fish species in the country.     

A multivariate morphological analysis of the Cardamine concatenata alliance (Brassicaceae)

Principal coordinate analysis using Gower’s similarity coefficient and canonical discriminant analysis were performed using morphological data to assess species distinctness in theCardamine concatenata alliance, comprising the eastern North American dentarias. The results of an overall principal coordinate analysis of the alliance using quantitative and qualitative characters revealed distinct and separate clusters that correspond to five previously recognized species (C. angustata, C. concatenata, C. diphylla, C. dissecta, C. maxima). One additional taxon,C. incisa, was found to group closely with theC. diphylla cluster. In a second principal coordinate analysis including only individuals fromC. diphylla andC. incisa, both are supported as distinct morphological entities. Canonical discriminant analysis of only above-ground quantitative characters was less effective in distinguishing previously recognized taxa, in keeping with the emphasis on qualitative characters in previous taxonomic treatments of the group.Cardamine incisa (Eames) Schumann (pro hybr.) is raised to the rank of species. A key to the species of theCardamine concatenata alliance is provided.     

Systematics of a widespread Southeast Asian frog,Rana chalconota (Amphibia: Anura: Ranidae)

The abundant Sundaland forest frog, Rana chalconota, has long been considered a single widespread species, although some authors have recommended its division into regional subspecies. The discovery of co‐occurring pairs of morphologically distinct populations in three widely separated parts of the range led to a morphological and molecular analysis of populations from all parts of the known range. The results suggest that R. chalconota consists of at least seven species from Thailand through Borneo and Java. Existing names are applied to three of these species, R. chalconota (Schlegel), R. raniceps (Peters) and R. labialis Boulenger. We describe four others as new species and suggest the existence of one or two additional, unnamed species. © 2009 The Linnean Society of London, Zoological Journal of the Linnean Society, 2009, 155 , 123–147.     

INTRA- AND INTERSPECIFIC DIFFERENCES IN AGONISTIC VOCALIZATION IN CROAKING GOURAMIS (GENUS: TRICHOPSIS,ANABANTOIDEI, TELEOSTEI)

ABSTRACT

In this study a detailed analysis of acoustical parameters of sounds produced by male Trichopsis vittatus, T. schalleri and T. pumilus during agonistic behaviour is reported. The calls consist of croaks which are composed of double pulses generated by modified pectoral fins. Calls of the three species are different in main frequency, number of double pulses within a croak and double pulse period. Croaks are uttered in series only in T. vittatus. Sound pressure levels are highest in T. pumilus, the smallest species. Amplitude of individual pulses of a double pulse are similar in T. pumilus and T. schalleri. Main frequency is negatively correlated with body mass in all species, but there is no correlation between sound pressure level and body mass. Differences in the calls of the three species suggest that T. schalleri is a distinct species. Furthermore, results indicate spectral characteristics and sound intensity could be of biological importance in fish.     

Phylogenetic analysis of the Systropha Illiger 1806 (Hymenoptera: Apoidea: Halictidae) and description of a new subgenus

The family Halictidae includes four subfamilies, Halictinae, Nomioidinae, Nomiinae and Rophitinae, apparently monophyletic. Systropha Illiger is the most diverse genus in Rophitinae (the Holartic genus Dufourea excluded). Several unique morphological, biogeographical and ecological features characterise the species within this taxon raising its interest for evolutionary studies. Now, to date there has been no extensive revision of the genus. The present work aims to alleviate this lack. In the first part, the authors propose an exhaustive catalogue, including the synonymy of the 26 described species. The last described species, Systropha heinzi Dubitzky 2004 syn. nov. is proposed as a junior synonym of S. kazakhstaniensis Patiny 2004, described one day earlier. The next parts of the study include a comprehensive key for the World species and the analysis of the species phylogeny based on 34 morphological characters. Converging with the conclusions of several former studies, this analysis points out the existence of 3 clades within the genus. These latter are described as 3 subgenera: S. (Systropha) Illiger 1806, S. (Systrophidia) Cockerell 1936 and S. (Austrosystropha) n. sg. Lastly, distribution and floral choices of taxa are specified.     

BIOACOUSTICS INDEX OF CONTENTS VOLUME 14

ABSTRACT

Here we present an acoustic approach for reliable sexing in four whistling duck species from the genus Dendrocygna and compare it with molecular and cloacal inspection techniques. In the four examined species, the White-faced Whistling Duck D. viduata, Fulvous Whistling Duck D. bicolor, Cuban Whistling Duck D. arborea and Red-billed Whistling Duck D. autumnalis, sexes are indistinguishable by appearance. However all the four species show strong sexual differences in the structure of their species-specific loud whistles. For 59 examined birds, an acoustic-based sexing showed 100% accordance to the DNA PCR analysis, while the cloacal inspection showed only 89.8% accuracy. The results demonstrate that acoustic sexing represents a feasible alternative to the two traditional methods as a noninvasive tool for the distant sexing of the four whistling duck species both in captivity and in the wild.     

Seven new species of Oculatella (Pseudanabaenales,Cyanobacteria): taxonomically recognizing cryptic diversification

A total of 27 strains of Oculatella were isolated, characterized and sequenced, and analysed phylogenetically with an additional environmental clone from the Atacama Desert and 10 strains isolated and sequenced by others. The strains were clearly separated based upon phylogenetic analyses conducted with a concatenated alignment of the 16S rRNA and 16S-23S ITS region of the ribosomal operons in the genus Oculatella. Differences in secondary structure of the conserved domains of the ITS region, as well as comparative analysis of P-distance among ITS regions, served to separate the strains into distinct taxonomic units. Seven new species of Oculatella were described, including four from arid to semi-arid soils (O. atacamensis, O. mojaviensis, O. coburnii, O. neakameniensis) and three from more mesic habitats, including a temperate lake (O. hafneriensis), a desert waterfall (O. cataractarum) and a Hawaiian sea cave (O. kauaiensis). The soil forms show statistically significant morphological differences, but the ranges overlap to a degree that they are not diagnosable by morphology, and these four cryptic species are characterized here using molecular characters. The more mesic species, including the type species from Mediterranean hypogea, O. subterranea, are all morphologically distinct from each other and from all four soil taxa. This report is the first to use solely molecular criteria to distinguish cryptic species of cyanobacteria.     

Examining the phylogeny of the Australasian Lymnaeidae (Heterobranchia: Pulmonata: Gastropoda) using mitochondrial, nuclear and morphological markers

We examined the species groups relationships of the freshwater snail genus Austropeplea using mitochondrial, nuclear and morphological markers in addition to traditional methods of shell shape analysis. Based primarily on the results of a combined molecular and morphological analysis, samples of the nominal species A. tomentosa form distinct lineages. The New Zealand populations of A. tomentosa are a very distinct lineage from any of the Australian populations attributed to A. tomentosa. Furthermore, within the Australian group, three lineages, south Australia, Tasmania and eastern Australia, appear to have undergone recent and/or rapid speciation events. Samples assigned to A. lessoni were resolved as two distinct lineages, representing the eastern and northern Australian populations. Kutikina hispida was resolved within the Australian A. tomentosa clade. Molecular results for A. viridis suggests that it is also composed of at least two distinct lineages that could be treated as species. Incongruence observed between the single mitochondrial, nuclear and morphological topologies highlight the importance of using a number of different datasets in the delimitation of species-group taxa.     

A new unexpected species of Chrysopa Leach from Cyprus with biogeographic remarks (Neuroptera: Chrysopidae)

Summary

Cyprus is rich in endemics; however, all but two lacewing species are shared with the mainland. Thus, the discovery of a new morphologically distinct species of chrysopid belonging to the extensively studied genus Chrysopa, Chrysopa niki n. sp., appears remarkable. While most Chrysopa species differ in relatively subtle morphological characters, the new taxon is set apart from all Western Palaearctic congeners due to a unique combination of pattern, venational, leg and genital characters. The characteristics of C. niki n. sp. suggest that it might be an endemic to Cyprus, not strictly related to other congeners, underlining the importance of the discovery. The biogeography of Cypriot Neuroptera is discussed in light of this new finding.     

A catalogue of teleosauroids (Crocodylomorpha: Thalattosuchia) from the Toarcian and Bajocian (Jurassic) of southern Luxembourg

Abstract

Teleosauroids were a clade of semi-marine crocodylomorphs that attained near-global distribution during the Jurassic Period. They were particularly common during the Toarcian (Early Jurassic) and are well documented throughout the UK and Germany. However, Toarcian teleosauroids discovered in Luxembourg have been little studied and rarely discussed in the scientific literature. Here we present a comprehensive catalogue of Luxembourg thalattosuchian specimens, including nine teleosauroids (all from the Toarcian) and five Thalattosuchia indeterminate (four from the Toarcian and one from the Bajocian), many of which are noted in the literature for the first time. We describe these specimens and identify two distinct genera (Steneosaurus and Platysuchus) as present in the sample as well as three, or possibly four, distinct species. This represents a high diversity of teleosauroid taxa (both common and rare forms) from the Toarcian rarely seen elsewhere in the world.     

Two new species of the genus Rhynchitobius Sharp, 1889 (Coleoptera: Rhynchitidae) in Dominican amber

New species of rhynchitid weevils, Rhynchitobius tanyrhinus n. sp. and R. xuthocolus n. sp. (Coleoptera: Rhynchitidae) in the tribe Auletini are described from Dominican amber. The former species is characterized by a long rostrum, narrow pronotum and elytra, rugose elytral intervals and distinct elytral striae. The latter species has a short rostrum, wide antennal club, yellow legs, non-rugose elytral intervals and weak elytral striae. The present study describes the first representatives of the family Rhynchitidae from Dominican amber.     

Relict distribution of Microhyla (Amphibia: Microhylidae) in the Ryukyu Archipelago: High diversity in East Asia maintained by insularization

The Ryukyu Archipelago, located at the southwestern part of Japan, is known as a group of continental islands and harbours many endemic taxa, supposedly reflecting its fairly long isolation from the Eurasian continent, Taiwan and the Japanese main islands. Microhyla okinavensis has been known as an endemic member of the terrestrial fauna of this archipelago. Molecular phylogenetic analyses using samples from nearly all island populations of the species and representative samples of other east Asian congeneric species revealed that M. okinavensis consists of four distinct subclades, of which the Amami, Okinawa and Miyako subclades, though exhibiting distinct genetic differentiations from each other, formed a monophyletic group (clade A). The remaining Yaeyama subclade was exclusively sister to M. mixtura from inland China, forming another monophyletic group (clade B), rendering M. okinavensis in the current definition paraphyletic. These results, as well as estimated dates of divergence from related taxa, indicate that M. okinavensis actually includes more than one distinct species. The results indicate that M. okinavensis and M. mixtura are relict species with disjunct distributions which had been most probably caused by invasion of M. fissipes in intervening areas.     

Molecular systematics of the skate subgenus Arctoraja (Bathyraja: Rajidae) and support for an undescribed species, the leopard skate, with comments on the phylogenetics of Bathyraja

Sequence variability in the cytochrome c oxidase I (COI) gene from 226 samples of the species previously considered Bathyraja parmifera (Rajidae) revealed three distinct haplotypes, one of which represents an undescribed species, the leopard skate. Further genetic examination of four closely related North Pacific and Bering Sea skate species, Bathyraja parmifera, B. simoterus, B. smirnovi, and the leopard skate in comparison with 19 related species indicates that together these four species comprise the subgenus Arctoraja. Phylogenetic analysis suggests that Arctoraja is monophyletic, but that the genus Bathyraja may be paraphyletic due to the phylogenetic position of Rhinoraja.     

Molecular phylogenetics and definition of the Acrapex minima Janse group (Lepidoptera,Noctuidae, Apameini,Sesamiina) with the description of four new species from the Afrotropics

Five morphologically similar species of Acrapex Hampson (Lepidoptera, Noctuidae, Noctuinae, Apameini), from sub-Saharan Africa are reviewed, including four new species that are described: Acrapex mondogeneta Le Ru n. sp., A. mubale Le Ru n. sp., A. robe Le Ru n. sp. and A. rubona Le Ru n. sp. These five species belong to a species complex that we hereby define as the Acrapex minima group. Host plants of three species are recorded; Acrapex minima is recorded for the first time on a host plant, Digitaria natalensis Stent; A. mondogeneta on Hyparrhenia hirta (L.) Stapf and A. rubona on Imperata cylindrica (L.) P. Beauv. We also conducted molecular phylogenetics (using both Bayesian inference and maximum likelihood) and molecular species delimitation analyses (Poisson tree processes) on a six gene multi-marker dataset (four mitochondrial and two nuclear gene fragments; 4582 nucleotides in length) of 42 specimens and 22 species, including 23 specimens from the Acrapex minima group. The results of the corresponding analyses support the monophyly of the group and the species status of the newly described taxa.     

Seven decades of monitoring the aquatic bug fauna of Lake Balaton (Heteroptera: Nepomorpha)

Detailed faunistic data originating from four sampling series of aquatic Heteroptera (Nepomorpha) in the Lake Balaton (the largest shallow lake of Central Europe) between 1928 and 2002 were analysed. A comparative analysis confirmed that the aquatic bug fauna of this great lake can be established with suitable accuracy if it is sampled by different but devoted collectors. So far 26 species of aquatic bugs have been reported from here. The fauna changed considerably during the seven decades. Species lists of the four basins of the lake established during the four sampling periods show characteristic differences. Not only the frequency of four Micronecta species (Micronecta griseola, M. pusilla, M. scholzi, M. minutissima) changed characteristically but there has been a distinct change in the ratio of rare species too. Rare species were present in significantly higher proportion in the period 1928–1930 than in any of the later samplings between 1984 and 2002. All these changes run parallel with the direction of anthropogenic influences.     

Tolmiea diplomenziesii: A new species from the Pacific Northwest and the diploid sister taxon of the autotetraploid T. menziesii (Saxifragaceae)

Tolmiea diplomenziesii, the diploid entity traditionally treated within a broadly circumscribed Tolmiea menziesii, is here formally described. Evidence is provided that this new species represents the diploid sister lineage to T., menziesii, which is re-circumscribed to include only autotetraploid plants. The diploid and autotetraploid entities are compared, and serve as an example of the level of taxonomic evidence for specific status that we consider appropriate for recognition of a cytological entity as a distinct species.