Relationships between abiotic variables and geographic variation in skulls of pumas (Puma concolor: Mammalia, Felidae) in North and South America

Relationships between patterns of geographic variation in cranial morphology and selected abiotic variables were studied in the puma ( Puma concolor Linnaeus). Our dataset consisted of 11 cranial, 6 dental, and 2 mandibular measurements of 1700 adults, which were separated by gender and age class and analysed by univariate and multivariate statistical procedures. Variation in size was correlated with precipitation, but size was more highly correlated with latitude and temperature. The pattern of geographic variation in size of P. concolor is consistent with Bergmann's rule; populations with larger pumas occur more distant from the equator than populations with smaller pumas. A combination of climatic and biotic factors contribute to patterns of geographic variation in size of P. concolor in North and South America.     

Estimation of body weights from craniometric variables in baboons

Body weights of adult baboons (genera Papio, Mandrillus, and Theropithecus) were gathered from notes of collectors and museum records. However, these data were insufficient to establish mean body weights for all baboon groups. Thus, log cube roots of mean body weights were regressed as functions of the logs of several cranial and dental variables. The resulting least squares regression coefficients were used to estimate weights for 503 adult baboons from cranial measurements. The ability of the various regression functions to assess baboon body weight was determined by comparing reported and estimated mean and individual body weights. The best estimator of baboon body weights was the function derived from the factor scores of a principal components analysis of seven craniometric variables regressed on body weight. However, each of these craniometric variables singly was nearly as precise an estimator of body weight as the multivariate combination of all seven. Other measurements such as dental dimensions and foramen magnum area estimated weight less accurately. Body weight estimates derived from the regression analyses coupled with museum and literature records allowed an assessment of size relationships among all baboon groups.     

Three-dimensional technology for linear morphological studies: a re-examination of cranial variation in four southern African indigenous populations.

In order to compare linear dimensions made by traditional anthropometric techniques, and those obtained from three-dimensional coordinates, samples of four indigenous southern African populations were analysed. Linear measurements were obtained using mathematically transformed, three-dimensional landmark data on 207 male crania of Cape Nguni, Natal Nguni, Sotho and Shangaan. Univariate comparisons for accuracy of the transformed linear data were made with those in a traditional linear study by de Villiers (The Skull of the South African Negro: A Biometrical and Morphological Study. Witwatersrand University Press, Johannesburg) on similar samples and equivalent landmarks. Comparisons were not made with her Penrose (Ann Eugenics 18 (1954) 337) analysis as an apparently anomalous 'shape'-'size' statistic was found. The univariate comparisons demonstrated that accurate linear measurements could be derived from three-dimensional data, showing that it is possible to simultaneously obtain data for three-dimensional geometric 'shape' and linear interlandmark analyses. Using Penrose and canonical variates analyses of the transformed three-dimensional interlandmark measurements, similar population distances were found for the four indigenous southern African populations. The inter-population distance relationships took the form of three separated pairs of distances, with the within-pair distances very similar in size. The cranial features of the four populations were found to be overall very similar morphometrically. However the populations were each shown by CVA to have population specific features, and using discriminant analyses 50% or more of the individual crania (with the exception of the Sotho) could be referred to their correct populations.     

Efficiency of cranial bilateral measurements in separating human populations

A set of 31 nonconventional paired cranial measurements, as well as six conventional nonpaired measures, were taken on 266 skulls, representing two related populations: Bedouins of the Israeli Negev Desert and Bedouins of the Sinai. The data were subjected to univariate and discriminant analyses to determine the relative efficacy of paired vs. conventional measures in sorting individuals according to tribal and sex affiliation. It was found that paired measures have greater discriminatory power (87%) than conventional ones (47%) in terms of classifying individuals belonging to human isolates derived from a common ancestor and sharing similar environmental conditions. This greater discrimination attests to the value of the level of "developmental noise" (a measure provided by fluctuating asymmetry) in sorting human populations. Possible explanations are proffered for the above finding.     

Maximum likelihood estimation of human craniometric heritabilities

This study presents univariate narrow-sense heritability estimates for 33 common craniometric dimensions, calculated using the maximum likelihood variance components method on a skeletal sample of 298 pedigreed individuals from Hallstatt, Austria. Quantitative genetic studies that use skeletal cranial measurements as a basis for inferring microevolutionary processes in human populations usually employ heritability estimates to represent the genetic variance of the population. The heritabilities used are often problematic: most come from studies of living humans, and/or they were calculated using statistical techniques or assumptions violated by human groups. Most bilateral breadth measures in the current study show low heritability estimates, while cranial length and height measures have heritability values ranging between 0.102-0.729. There appear to be differences between the heritabilities calculated from crania and those from anthropometric studies of living humans, suggesting that the use of the latter in quantitative genetic models of skeletal data may be inappropriate. The univariate skeletal heritability estimates seem to group into distinct regions of the cranium, based on their relative values. The most salient group of measurements is for the midfacial/orbital region, with a number of measures showing heritabilities less than 0.30. Several possible reasons behind this pattern are examined. Given the fact that heritabilities calculated on one population should not be applied to others, suggestions are made for the use of the data presented.     

The role of diet and temperature in shaping cranial diversification of South American human populations: an approach based on spatial regression and divergence rate tests

Aim Understanding the importance of ecological factors in the origin and maintenance of patterns of phenotypic variation among populations, in an explicit geographical context, is one of the main goals of human biology, ecology and evolutionary biology. Here we study the ecological factors responsible for craniofacial variation among human populations from South America. Location South America. Methods We studied a dataset of 718 males from 40 South American populations, coming from groups that inhabited different geographical and ecological regions. Cranial size and shape variation were studied using 30 cranial measurements. We first used spatial correlograms and interpolated maps to address spatial patterns. We then regressed the shape (principal component scores) and size variables against ecology (mean annual temperature and diet) using multiple and multivariate spatial regression. Finally, the expected magnitudes of shape and size divergence under the influence of genetic drift and mutations alone were evaluated using neutral expectation for the divergence rate. Results The spatial correlograms showed a cline affecting the entire South American distribution. Interpolated maps showed that size and allometric shape vary from south‐east to north‐west. Multiple and multivariate regression analyses suggested that diet has the largest and most significant effect on this pattern of size and allometric shape variation. Finally, the results of the divergence rate test suggested that random processes alone cannot account for the morphological divergence exhibited by cranial size and allometric shape scores among southernmost populations. Main conclusions Correlograms, spatial regression and divergence rate analyses showed that although local factors (neutral processes or local environmental conditions) are important to explain spatial interpopulation differentiation in cranial characteristics among these populations, there is significant correlation of cranial size and allometric shape variation with diet. Gene flow among human populations, or local environmental conditions, could explain spatial variation mainly at smaller spatial scales, whereas the large‐scale pattern of the South American dataset is mainly related to the high proportion of carbohydrates and low proportion of proteins consumed.     

Human activity patterns and skeletal metric indicators in the upper limb

This study investigates skeletal metric traits of long bones of upper limb and the relationship between these traits and human activity in males of a recent, well-documented skeletal sample of Italian population from the Frassetto collection (Department of Experimental Evolutionary Biology, University of Bologna). The study analyzes the impact of some human activities on the skeleton, taking into account the possibility of an assessment of functional stresses caused by these activities on the basis of metric characteristics. The data consist of measurements of linear and angular bone traits, obtained by traditional and new instruments. With the purpose to find out the best indicators of occupational stress among the measured traits and indices, univariate and multivariate statistical analyses were carried out. Then the results obtained previously were used to analyze a sample with unknown occupation. The efficacy of metric stress indicators is discussed.     

A classification of European skulls from three time periods

We analyze the taxonomic structure of European populations at three time periods, the Early Middle Ages, the Late Middle Ages and the Recent Period. The data consist of sample means for 10 cranial variables based on 137, 108, and 183 samples for the three periods. Clustering by standard numerical taxonomic procedures reveals that the data are represented only poorly as hierarchic classifications. The clusters form significant and moderately strong associations with an arrangement of the samples by regions (geography) and by language family. Whereas during the early period, language family showed a stronger association with clusters based on cranial morphology, in the recent populations these clusters correspond better with geography than with language. Ordinations of these populations by means of nonmetric multidimensional scaling shows the continuity of the taxonomic structure at all three periods. Only a few populations are outliers. The relations between phenetic distances (cranial morphology), geography, and language are examined by means of multiple Mantel tests. At all three periods geography is correlated somewhat more strongly with phenetics than is language affiliation, but the correlation with the latter increases with time. When the data are pooled over the three periods, the populations tend to group by language affiliation more than they do by period. Ordination of the pooled data reveals language patterns rather than patterns due to period, showing strong shifts in cranial measurements through time. These analyses show that while there is no clear-cut taxonomic structure in European populations that would justify the traditional classifications based on the crania, there are significant and important associations with both language affiliation, geography, and time period, in this order. These patterns are likely to have become established through the migration and subsequent expansion of populations into their areas of occupation during the time interval studied rather than by geographic differentiation in situ.     

Craniometric variation in a population of mantled howler monkeys (Alouatta palliata): evidence of size selection in females and growth in dentally mature males

A large body of work on monkey cranial metrics (involving conclusions about interspecific variation, sexual dimorphism, and ontogeny) depends on the assumptions that growth effectively ceases with dental maturity and that intraspecific variation is negligible. We test these assumptions by examining variation in 39 measurements of 166 dentally mature Alouatta palliata skulls from animals found dead on Barro Colorado Island (BCI), Panama. We also investigate whether this population is under size-based selection, since our found-dead sample reflects the natural mortality in this population. The sample was divided into three age stages by occlusal wear (A-C, least to most wear). Female stage A means are significantly smaller than female stage B means for three cranial measures. Female stage B means are significantly smaller than female stage C means for five cranial measures. Male stage A means are significantly smaller than male stage B means for 21 cranial measures. Multivariate analyses confirm this trend of expansion between adult age stages. The dental metric and suture closure data suggest that the cranial expansion in females is due to size-based selection, while the cranial expansion in males is due to significant growth after dental maturity. Sexual dimorphism ratios are highly variable across different samples of A. palliata, indicating that dimorphism varies between populations of this species. These results provide insight into the selective forces operating on the BCI howlers and challenge the validity of the many studies which pool subspecies and assume growth ceases with maturity.     

Modern analyses on an historical data set: skull morphology of Italian red squirrel populations

Recent molecular evidence suggests that Sciurus vulgaris populations from Calabria (southern Italy) are distinct from those occurring in northern and central Italy. Here, we re-analyzed using multivariate and univariate techniques an historical dataset provided by Cavazza (1913), who documented measurements for the now extinct squirrel population from Campania. Both univariate and multivariate analyses confirmed that the sample from Calabria was homogenous and relatively distinct compared to the rest of the squirrel samples.     

Comparative analysis of dermatoglyphic traits in Hungarian and Gypsy populations

We examined dermatoglyphic prints of children in 11 Hungarian and 5 Gypsy population samples (collected from 1,998 children). We compared Hungarian and Gypsy populations based on 22 finger and 24 palmar traits. In univariate comparisons the two ethnic groups differed significantly in half of the studied variables (9 finger and 14 palmar traits). We used several types of multivariate analyses of the studied traits to separate the population samples. Homogeneity analysis and discriminant analysis proved to be the most appropriate method to distinguish the populations, whereas a principal components analysis was less adequate. Multivariate analyses were conducted separately for both finger and palmar traits. Although the differences between the populations were more pronounced for palmar traits, in our study Hungarian and Gypsy populations showed the best separation when finger and palmar traits were combined for analysis, except in the principal components analysis. As expected, the Hungarian and Gypsy populations separated definitely in most statistical analyses; the main reason for this is the different origins of the two ethnic groups. The existence of the difference also shows that admixture between Hungarians and Gypsies has been small despite their living beside one another for several centuries.     

Hypoplastic area method for analyzing dental enamel hypoplasia

Most analyses of dental enamel hypoplasia compare frequencies of disturbed tooth types, which do not account for variability in the area of affected enamel. An alternate methodology, hypoplastic area, is presented here that accounts for this variability by combining acute and continuous enamel hypoplasia into an interval-level variable. The method compares samples based on individuals, by multiple tooth type variables, or by a single value rather than by tooth types. Use of the hypoplastic area method is illustrated by analyzing human skeletal dentitions in three archaeological samples: Meroitic Nubians from Semna South, Sudan; Anasazi from Navajo Reservoir, New Mexico; and Mogollon from Grasshopper Pueblo, Arizona. Both univariate and multivariate statistical tests are employed to assess variation in defects between individuals and samples. By incorporating measurements of continuous defects, the hypoplastic area method provides information beyond that of frequency data in comparing levels of stress. Flexibility of the method is also discussed. © 1995 Wiley-Liss, Inc.     

Methodological contributions to craniometric studies of some early medieval populations of the upper Donau region. II. Comparison of early medieval populations on absolute skull measurements

On the basis of the means of 10 cranial measurements of 7 medieval populations different methodical approaches of the two commonly used distance estimation methods are compared with respect to their relevance. In addition also the results obtained by the same methods but based on different data (5 indices or 10 measurements, respectively) were compared. In spite of the fact that (DD)2 distances and the dendrograms (after Creel) give better results than the other methodical and graphic variants, the choice of qualified characters is more important than a certain distance method according to the authors' opinion. Thus the groupings and the clustering on the basis of the means of only 5 cranial indices show the best accordance with the ethnogenetic and historical conditions. An additional examination of the segregative values of cranial measurements revealed that the omission of the smallest frontal breadth and probably also the nasal height and breadth does not result in a reduction of the segregative accuracy.     

Estimation of sex from the dimensions of foot, footprints, and shoe

This study intends to determine if the sex of an individual can be identified by foot lengths, shoe lengths, and/or footprints. For this purpose, foot length, foot breadth, and foot heel breadth of 506 subjects, comprising 253 females and 253 males ranging from 17.56 to 82.92 years of age, were taken. In addition, the footprints (length, breadth, and heel breadth) and footwear (length and breadth) of the same subjects were measured. Finally, the shoe size of the subjects was recorded. Univariate and multivariate discriminant function models were developed for sex allocations. Statistical analyses indicated that univariate models correctly assign approximately 67-94% of individuals to their correct sex groups. Among univariate models the most reliable measurement was shoe length. The results of multivariate models were better than those of univariate ones, with an approximately 82-96% correct assignment. The best multivariate model was comprised of four variables: foot length, shoe length, shoe breadth and shoe size. It could be suggested that these discriminant functions can provide useful clues to establish personal identity whenever complete or partial feet, footprints, or footwear are recovered.     

Biological affinities between migrant and parental populations of fishermen on the east coast of India.

We examined biological affinities between the migrant groups of fishermen in Puri and their parental counterparts using 3 sets of variables: genetic markers, anthropometric measurements, and quantitative dermatoglyphics. Results of both univariate and multivariate analyses suggest a significant migration effect, diversifying migrants from their parental populations, although the distance configurations based on each set of variables resemble each other. The migration effect is particularly remarkable for the anthropometric measurements. The plot of group centroids based on the discriminant analysis of the 7 populations depicts a clear segregation of migrants from the parental populations. Because of relatively large effective population sizes and short history of these populations in Puri, the role of genetic drift can be safely ruled out. However, a founder effect is a plausible reason for the observed differentiation of the migrants from their parental groups, especially given that certain rare variants that were not observed in the parental populations appear in the migrants. That the founders were a select group of fishermen with respect to body dimensions, not a random group, can be inferred from the occupational differences among the migrant groups, which in turn suggests phenotypic plasticity in the observed differentiation. Regression of mean phenotypic variance and heterozygosity on the distance from the centroid suggests a strong possibility of external gene flow into the migrant populations in Puri.     

3D facial phenotyping by biometric sibling matching used in contemporary genomic methodologies

The analysis of contemporary genomic data typically operates on one-dimensional phenotypic measurements (e.g. standing height). Here we report on a data-driven, family-informed strategy to facial phenotyping that searches for biologically relevant traits and reduces multivariate 3D facial shape variability into amendable univariate measurements, while preserving its structurally complex nature. We performed a biometric identification of siblings in a sample of 424 children, defining 1,048 sib-shared facial traits. Subsequent quantification and analyses in an independent European cohort (n = 8,246) demonstrated significant heritability for a subset of traits (0.17–0.53) and highlighted 218 genome-wide significant loci (38 also study-wide) associated with facial variation shared by siblings. These loci showed preferential enrichment for active chromatin marks in cranial neural crest cells and embryonic craniofacial tissues and several regions harbor putative craniofacial genes, thereby enhancing our knowledge on the genetic architecture of normal-range facial variation.     

Within-group human variation in the Asian Pleistocene: the three Upper Cave crania

Numerous studies on Pleistocene samples have shown that within-group cranial variation was greater than that seen today. The three anatomically modern Upper Cave crania (UC 101, UC 102, and UC 103) from Zhoukoudian, China provide one of the best samples available for addressing the issue of the antiquity of the modern pattern of within-group cranial variability because archaeological evidence indicates that they are spatially and temporally restricted. Research on the Upper Cave fossils usually only includes UC 101 and UC 103 because of postmortem damage to UC 102's cranial vault. However, the face of UC 102 is undamaged, allowing for most facial measurements to be performed accurately. In this study we use facial dimensions to compare all three Upper Cave specimens, and we evaluate whether the variation seen among them is larger than that observed in extant populations.Using a worldwide sample of modern populations to establish a baseline, the three Upper Cave crania were compared to each other. Since there is disagreement over the sex of UC 102, this specimen is treated alternately as a female and as a male. Results show that the Upper Cave specimens exhibit significantly more variation than do individuals within more recent human populations, especially if UC 102 is considered male. Furthermore, results indicate that the fossils never fall into the same modern human group, and that each specimen is significantly atypical of its nearest modern neighbor in multivariate space.We conclude that the three Upper Cave crania do not represent a family group but are representative of the larger contemporaneous heterogeneous Asian Pleistocene population. Our results support the contention that today's within-group homogeneity is a relatively recent phenomenon, and is likely the result of a Neolithic population expansion and its many effects.     

Cranial morphology of the California vole (Microtus californicus,Cricetidae) in a contact zone

Zones of contact between divergent biological forms within or between species are critical to the study of speciation. How characters flow across contact zones can be informative of the speciation process. To better understand this phenomenon in a mammal, we investigated cranial shape change in a contact zone between northern and southern phylogeographical groups of California voles (Microtus californicus). We took 12 linear measurements of skulls, one measurement of the mandible, and coded the presence and absence of two skull foramina for 427 specimens. In multivariate analyses, skulls within parental regions were correctly assigned more than 90% of the time. In the contact zone, 49% were classified as northern and 51% as southern, with a bimodal distribution of posterior probability values. Foraminal patterns in the contact zone were intermediate between northern and southern regions. A cline analysis for coastal populations suggested a similar centre for mitochondrial and nuclear markers, although a centre for the morphological data was offset. Cranial morphology indicates an intermediate area with overlap between the two regions, as suggested by the molecular data, with a pattern distinct from mitochondrial DNA or nuclear DNA markers. © 2011 The Linnean Society of London, Biological Journal of the Linnean Society, 2011, 104 , 264–283.     

Metric analyses of an Early Holocene human skeleton from Gua Gunung Runtuh,Malaysia

A nearly complete human skeleton dating to the Early Holocene (epi-Paleolithic culture) excavated from Gua Gunung Runtuh, Malaysia, is described. Cranial, dental, and limb bone measurements are recorded on the skeleton, and compared with early and modern skeletal samples from Southeast Asia and Australia. The comparisons demonstrate that the Gua Gunung specimen is most similar to Australian Aborigines in dental and limb measurements, while the cranial measurements indicate a close affinity to Mesolithic samples from Malaysia and Flores. These findings further suggest that the Gua Gunung skeleton, as well as other fossils from Tabon and Niah, are representative of an early group of people who occupied Sundaland during the late Pleistocene, and may be the ancestors of Australian Aborigines. Some of the dental and limb bone measurements exhibited by the ancestors persist in Southeast Asian populations until the early Holocene. Differences in cranial traits have, however, accumulated since the late Pleistocene in Australian Aborigines and early Southeast Asian peoples. Am J Phys Anthropol 109:327–340, 1999. © 1999 Wiley-Liss, Inc.     

东方蝾螈性二型性特征分析

以东方蝾螈大别山种群为实验材料,随机选取162只蝾螈(雄52只,雌110只),通过单变量、双变量、多变量分析的方法,进行11项体征的测量分析.结果表明,头体长是本研究的最适单变量,且头体长与腋胯距之间的相关性最高;PCl在雄性和雌性中均与头体长密切相关,且大多数体征与头体长进行比例分析均显示出异速生长关系,东方蝾螈性二型性普遍存在.本研究中11项体征呈现符合Renseh法则的雌性依赖性二型性演化特征,这种性二型性特征可能是一系列复杂的非对称性选择的结果.