Comparison of Canavanyl-Envelope Proteins to Normal Envelope Proteins

Electrophoretic analysis showed arginine- and canavanine-containing envelope proteins to be qualitatively the same. Quantitative differences may be due to rapid degradation of some canavanine-containing envelope proteins.     

Proteins

Proteins continue to surprise and amaze us in the myriad of ways in which they achieve biological function. The Proteins section in this issue of Current Opinion in Structural Biology highlights several proteins in which large conformational changes and evolutionary divergence in structure and function, play essential roles in their adaptation to a variety of biological functions. In addition, fundamental advances have been made in research, spurred on by industrial interest in the use of proteins as drug targets or as catalysts. All of the reviews in this section document the fact that multiple crystal structures of a protein in different functional states, and of different members of protein families, are necessary for the composition of a complete structural picture.     

Synaptonemal Complex Proteins: Specific Proteins of Meiotic Chromosomes

The review considers proteins of the synaptonemal complex (SC), a specific structure formed between homologous chromosomes in maturing germline cells during meiotic prophase I. The structure and functions are described for proteins that form ultrastructural SC elements in mammals, in yeast, and in higher plants. The roles of cohesins and of the SC proteins in meiotic sister-chromatid cohesion are considered. Though still scarce, data are summarized on the SC self-assembly and dissociation and on the molecular composition of SC-associated recombination nodules, which provide a compartment for meiotic recombination enzymes. The accumulating data on the SC molecular components and on their structure, properties, and interactions improve the understanding of the SC function.     

细胞膜蛋白与细胞骨架蛋白相互作用研究进展

细胞膜蛋白与胞浆骨架蛋白的相互作用对于维持细胞正常形态 ,细胞粘附与信号传导有重要作用。含有 4 .1 JEF结构域的蛋白 4 .1超家族与含有PDZ结构域的MAGUK蛋白家族能结合多种膜蛋白胞内区与胞浆蛋白 ,在膜蛋白与胞浆蛋白之间建立联系 ,对于细胞、细胞 -细胞间连接的正常结构与功能的维持有着重要作用。     

蛋白质的玻璃化

在成玻载体(糖类)和保护剂(分子伴侣和脱水蛋白)存在下,蛋白质类生物活性物质可在室温下被玻璃化.这类玻璃态产品在室温下极其稳定,已被用于可在室温下长期储、运的新一代体外诊断试剂盒的生产.有迹象表明,植物种子的休眠即是由于种子内含有全套成玻物和保护剂,使其所含活性分子能在自然条件下玻璃化而高度稳定.     

Water-Transporting Proteins

Transport through lipids and aquaporins is osmotic and entirely driven by the difference in osmotic pressure. Water transport in cotransporters and uniporters is different: Water can be cotransported, energized by coupling to the substrate flux by a mechanism closely associated with protein. In the K⁺/Cl⁻ and the Na⁺/K⁺/2Cl⁻ cotransporters, water is entirely cotransported, while water transport in glucose uniporters and Na⁺-coupled transporters of nutrients and neurotransmitters takes place by both osmosis and cotransport. The molecular mechanism behind cotransport of water is not clear. It is associated with the substrate movements in aqueous pathways within the protein; a conventional unstirred layer mechanism can be ruled out, due to high rates of diffusion in the cytoplasm. The physiological roles of the various modes of water transport are reviewed in relation to epithelial transport. Epithelial water transport is energized by the movements of ions, but how the coupling takes place is uncertain. All epithelia can transport water uphill against an osmotic gradient, which is hard to explain by simple osmosis. Furthermore, genetic removal of aquaporins has not given support to osmosis as the exclusive mode of transport. Water cotransport can explain the coupling between ion and water transport, a major fraction of transepithelial water transport and uphill water transport. Aquaporins enhance water transport by utilizing osmotic gradients and cause the osmolarity of the transportate to approach isotonicity.     

兼职功能蛋白

兼职功能蛋白(moonlighting proteins)是指一类具有两种或两种以上功能的蛋白,且这些功能间没有直接相关性,此类蛋白能够通过多种形式转换其功能.随着科学研究的深入,越来越多的已知功能的蛋白被发现具有新型兼职功能,其兼职功能对生物体的意义绝不亚于其所谓本职功能.兼职功能蛋白的发现大大拓展了基因、蛋白质与生理功能一一对应的传统观念;特别是最近研究发现一类叫做无固有结构蛋白(intrinsically unstructured proteins,IUPs)表现出多功能性,向"蛋白质的功能等视于确定的三维结构"的经典定律发起了挑战.本文综述了兼职功能蛋白的功能转换机制、进化历程、研究方法等方面的最新研究进展,同时对兼职功能蛋白给生命科学研究带来的新思路和新挑战进行了深入的讨论.     

MAR结合蛋白

MAR (matrix association regions)是真核基因组的DNA序列中可特异性地与核基质紧密结合的区域.MAR通过特异性地与一些MAR结合蛋白相互作用,在真核基因的复制和表达调控以及染色体的包装构建等方面发挥重要作用.MAR结合蛋白主要包括一些构成染色质或核基质的结构蛋白（如组蛋白H₁、拓扑异构酶Ⅰ和Ⅱ、HMG I/Y、Lamin B₁、Matrin等）以及一些组织特异性表达的蛋白（如SATB₁、骨钙蛋白基因启动子结合因子等）.根据它们与核基质的关系将MAR结合蛋白分为三类：核基质富含组分、核基质稀有组分以及非核基质组分,对其与MAR的相互作用进行了比较和分析.     

Proteins of Yaba Monkey Tumor Virus I. Structural Proteins

Yaba virus proteins were characterized by polyacrylamide gel electrophoresis. Electrophoresis of Yaba virion (proteins) dissociated by sodium dodecyl sulfate and 2-mercaptoethanol in continuous and discontinuous buffer systems yielded 37 polypeptide species by staining and by counting bands of radioactively labeled polypeptides. The molecular weights of the viral polypeptide species were found to range from 10,000 to 220,000 by comparing the relative distance of migration of viral proteins with proteins of known molecular weights. Two polypeptides were removed from purified virions by nonionic detergent nonidet P -40 treatment, and the amount of one polypeptide was reduced. Purified cores yielded 21 polypeptide species, none of which was labeled with radioactive glucosamine.     

Proteins wriggle

We propose an algorithmic strategy for improving the efficiency of Monte Carlo searches for the low-energy states of proteins. Our strategy is motivated by a model of how proteins alter their shapes. In our model, when proteins fold under physiological conditions, their backbone dihedral angles change synchronously in groups of four or more to avoid steric clashes and respect the kinematic conservation laws. They wriggle; they do not thrash. We describe a simple algorithm that can be used to incorporate wriggling in Monte Carlo simulations of protein folding. We have tested this wriggling algorithm against a code in which the dihedral angles are varied independently (thrashing). Our standard of success is the average root-mean-square distance (rmsd) between the alpha-carbons of the folding protein and those of its native structure. After 100,000 Monte Carlo sweeps, the relative decrease in the mean rmsd, as one switches from thrashing to wriggling, rises from 11% for the protein 3LZM with 164 amino acids (aa) to 40% for the protein 1A1S with 313 aa and 47% for the protein 16PK with 415 aa. These results suggest that wriggling is useful and that its utility increases with the size of the protein. One may implement wriggling on a parallel computer or a computer farm.     

Multifunctional Proteins

Biophysics - A surprisingly small number of human genes (19–20 thousand) is not consistent with a much larger number of proteins and the number of their functions. One of the factors of...     

Toll 样蛋白

Toll样蛋白属Ⅰ型细胞因子受体跨膜糖蛋白。以细菌壁成分作为外源配基,起细菌内毒素(即脂多糖,LPS)共受体作用,介导LPS信号转导,活化髓系与非髓系细胞内NF—кB信号途径。刺激宿主先天与适应性免疫系统。参与调节宿主的免疫应答和炎症反应。