Numerical analyses of seed morphology and its taxonomic significance in the tribe Nigelleae (Ranunculaceae)

We examined the seed morphology of Nigella, Garidella and Komaroffia to aid systematics and taxonomy. The seeds of 21 taxa in 20 species from Mediterranean and West Asian countries were studied using both zoom stereo and scanning electron microscopy (SEM). Principal coordinate analysis (PCoA) and unweighted average linkage analysis (UPGMA) were performed to assess the contribution of seed characters to the taxonomy of the tribe. Representative pictures from zoom stereo microscopy and SEM studies and measurement of seeds are presented. Most studied species showed unique seed surface sculpturing features, and seed shape, size and surface sculpturing separated the studied taxa into five main groups. However, the variation in seed shape and color were found to be in conflict with the generic taxonomy while macromorphological characters were found more congruent with the sectional taxonomy than with the generic taxonomy. Five main types of seed ornamentations – rugulose + striate, granulate, smooth, rugulose and mucronulate – were identified. Patterns in seed micromorphology strongly supported the sectional level taxonomy of Nigella. Two of the three sections of the genus were found to be well differentiated in terms of seed characters. Furthermore, seed morphology alone provide good support to Garidella as a distinct genus, but shows less taxonomic value for Komaroffia.     

Systematic significance of seed coat morphology inSilene L. s. str. (sileneae-caryophyllaceae) from Korea

Seeds of eight species ofSilene s. str. in Korea were examined with a dissecting stereomicroscope and a scanning electron microscope (SEM) to evaluate the systematic significance of seed coat microstructure. The seeds ofSilene s. str. were characterized by triangular or reniform shape, planed or concave dorsal surface in outline, tuberculate or colliculate testa, and sinuated cell margin. Based on the degree of grooves and invagination at dorsal surface, the seeds of the examined taxa ofSilene s. str. fall into two distinct groups: (I) dorsal grooves inconspicuous, surface planed (Silene jenisseensis andS. repens), (II) dorsal grooves conspicuous, surface concave (six remaining taxa). Within each group, seeds of all species may be further distinguished based on shape, size, and testa surface sculpturing. A key to the different species or groups of species is provided, and the systematic significance between/among the taxa is also briefly discussed.     

Seed coat sculpture in Comanthera (Eriocaulaceae) and its implications on taxonomy and phylogenetics

Eriocaulaceae occurs primarily in the Neotropics, diversifying mostly in mountainous areas in southeastern Brazil. They are popularly known as everlasting plants, because once dried, they retain the appearance of living structures, being widely used as ornamentals. Most of the commercialized species belong to the genus Comanthera L.B.Sm., which was reestablished from Syngonanthus Ruhland. Comanthera groups 41 species, 26 in Comanthera subg. Comanthera and 15 in C. subg. Thysanocephalus, all restricted to South America. Phylogenetic analyses show Syngonanthus and Comanthera, as well as both Comanthera subgenera, as monophyletic and sister groups. Seed coat ornamentation proved to be useful and informative to help in determining taxonomic relationships in many plant groups. This study aims to characterize the external morphology of the seed coat of Comanthera and its subgenera using scanning electron microscopy, and discuss its taxonomic and phylogenetic implications. Seeds from nine species of Comanthera were analyzed, seven of which belong to C. subg. Comanthera and two to C. subg. Thysanocephalus. The results were compared with four species of Syngonanthus and one of Leiothrix. In Comanthera and Leiothrix the external periclinal walls remain intact, whereas they degenerate in the remaining genera. However, seed coat ornamentation in Leiothrix and Comanthera has distinct origins, as in the former, it comes from projections of the external layer of the outer integument, forming a striate pattern, and in the latter, from projections of the inner layer, conferring a rough pattern. Comanthera subg. Comanthera shows a rugose undulatory pattern, whilst C. subg. Thysanocephalus has a rugose micropapillate pattern. The newly reported features of the seed coat provide support for the Comanthera subgenera, thus presenting taxonomic and phylogenetic value.     

<Emphasis Type="Italic">Anacamptis</Emphasis> versus <Emphasis Type="Italic">Orchis</Emphasis> (Orchidaceae): seed micromorphology and its taxonomic significance

Seed micromorphology of 24 taxa of the genera Anacamptis and Orchis was examined under light and scanning electron microscopy. Seed qualitative characters appear very useful at the supraspecific level in the subtribe Orchidinae. Based on our observations, the sculpturing of the periclinal walls of the medial testa cells, the seed shape and several features of the anticlinal walls of the apical cells showed variability between the studied taxa, with special relevance of the first character. According to this factor, we found one type of seed for Anacamptis and two for Orchis. The taxonomic value of seed coat characters is compared with the last taxonomic proposals for the genera Anacamptis and Orchis.     

Comparative seed morphology and character evolution in the genus Lysimachia (Myrsinaceae) and related taxa

Summary We investigated seed morphology in 34 species of the genus Lysimachia and in 14 species and two subspecies of six additional genera (Anagallis, Ardisiandra, Asterolinon, Glaux, Pelletiera, Trientalis), which have been shown to be closely related to, or are placed within Lysimachia in previous molecular studies. We studied seed shape, seed coat structure, and seed coat surface patterns. Three major types of seed shape were identified: (1) sectoroid, (2) polyhedral, and (3) coarsely rugose with concave hilar area. In addition, seeds may be keeled or winged. The outer layer of the seed coat is either sponge-like and adhering only loosely to the inner seed coat or it is thin and tightly adhering to the underlying tissue. Seed surface patterns can be divided into six main types: (1) reticulate, (2) tuberculate, (3) vesiculose, (4) colliculate, (5) undulate, or (6) poroid-alveolate. Seed surface patterns are mostly congruent with molecular phylogenetic relationships. A reticulate surface pattern is diagnostic of, e.g. Lysimachia subgenera Palladia and Hawaiian Lysimachiopsis. Mapping seed characters onto a recent phylogenetic tree, reveals that they provide potentially synapomorphic character states for various subclades of Lysimachia. Salient examples include a rugose seed shape, which turns out to be synapomorphic for the clade comprising the genus Pelletiera plus Asterolinon linum-stellatum and a sponge-like outer seed coat layer, which characterizes a clade with Lysimachia vulgaris, L. thyrsiflora, and L. terrestris, with an analogue that apparently evolved in parallel in Trientalis europaea. We also discuss possible habitat factors that may have favored the independent evolution of particular seed types such as winged seeds in various lineages.     

Taxonomic importance of seed morphology in Gentiana (Gentianaceae)

The seeds of Gentiana show high diversity in size, shape and surface pattern. Until now, seeds of only a limited number of taxa have been studied in detail and their utility in the subgeneric classification of Gentiana has not been evaluated. In this study we investigated seed micromorphology of the poorly known sections Pneumonanthe, Frigidae and Isomeria. In order to evaluate the relevance of seed sculpturing for taxonomy, we selected qualitative characters of seed shape and testa ornamentation of all documented sections and performed cluster analyses based on presence and absence of coded characters. Several new scanning electron microscopy pictures of seeds provided a number of valuable characters for the subgeneric differentiation of Gentiana. The results of the cluster analyses of seed characters generally support the sectional classification given by former authors. However, the European Gentiana asclepiadea does not group together with other taxa of section Pneumonanthe, but clusters near to the strictly European section Gentiana. Gentiana froelichii, endemic to the south‐east Alps and treated traditionally within section Frigidae, clusters together with taxa of the European section Ciminalis. Our results reveal that seed micromorphology supports the reassignment of some taxa incertae sedis within Gentiana. © 2010 The Linnean Society of London, Botanical Journal of the Linnean Society, 2010, 162 , 101–115.     

Mericarp morphology and its systematic implications for the genus Salvia L. section Hymenosphace Benth. (Lamiaceae) in Turkey

Mericarp morphology of 15 taxa of Salvia L. section Hymenosphace Benth. in Turkey were investigated by light microscopy (LM) and scanning electron microscopy (SEM) to evaluate the utility of mericarp characters in systematic studies. Mericarps ranged from 2.50 to 5.38?mm in length and 2.04 to 4.70?mm in width. Mericarp shape was prolate-spheroid or near spherical with a length-to-width ratio of 1.02?C1.48. Transverse sections of the mericarps were rounded or rounded-trigonous. Mericarp surfaces presented colliculate, reticulate, verrucate or foveate sculpturing patterns, mostly as a result of the sculpturing of the exocarp cell walls with the pattern determined by whether the periclinal walls were concave or convex and whether the anticlinal walls were raised or sunken. Colliculate surface sculpturing (periclinal walls convex) was the most common among the taxa examined. The variation in the nature of surface sculpturing, mericarp shape and size, exocarp cell shape, nature of transverse sections and abscission scar diameter proved useful diagnostic characters. Variation was sufficient to distinguish taxa at species level, including morphologically similar species. Data provided here are also relevant to phylogenetic questions at higher levels within Salvia.     

Factors Underlying the Narrow Distribution of the Mediterranean Annual Plant Arenaria provincialis (Caryophyllaceae)

The factors responsible for the patterns of niche differentiation and narrow endemism have rarely been investigated in annual Mediterranean plants. This topic was addressed here by performing comparative studies on realized niches, regional occupancy, global biogeographical distribution and seed traits of a set of Arenaria (Caryophyllaceae) species inhabiting southern Provence (SE France), focusing in particular on Arenaria provincialis, a narrow endemic restricted to the hills and modest calcareous mountains around the city of Marseille. Field studies were carried out from 2008 to 2009 at 624 sites in the limestone mountains where Arenaria species are likely to occur. The Arenaria species occurring in southern Provence vary greatly in their patterns of regional occupancy and their biogeographical distribution. Multivariate analysis of the realized niche showed that they have some similar limiting environmental factors in common, but they do not all occupy the same habitats. Studies on the fruits and seeds showed that the endemic A. provincialis has a larger seed than its congeners and a capsule that remains closed and falls from the plant at maturity. This well-differentiated diaspore specific to A. provincialis may be responsible for the limited dispersal capacity of this species. Phylogenetic analyses showed that A. provincialis is not closely related to the other taxa inhabiting southern Provence, but rather to Arenaria occurring in highland areas in the south of France. The restricted pattern of distribution of A. provincialis is probably due to the past isolation event from which it originated and to its limited dispersal capacity, rather than resulting from its ecological niche range.     

Molecular phylogenetic analysis of Arenaria (Caryophyllaceae: tribe Arenarieae) and its allies inferred from nuclear DNA internal transcribed spacer and plastid DNA rps16 sequences

The systematics and phylogeny of the genus Arenaria and allied genera are unresolved. The use of morphological data has resulted in contradictory taxonomic concepts in the past due to their homoplastic nature. We present a phylogenetic analysis based on internal transcribed spacer (ITS) and rps16 sequence data of 140 (132 taxa) and 131 (120 taxa) accessions, respectively. Maximum parsimony and Bayesian analyses of each marker produced nearly congruent trees. Monophyly of Arenaria s.s. and Eremogone is confirmed here. Our results corroborate earlier results indicating that Arenaria subgenus Odontostemma is monophyletic, but outside the core group of Arenaria. Arenaria subgenus Solitaria is sister to Odontostemma and also not closely related to the latter; both of these subgenera are excluded from Arenaria and treated as distinct genera. The molecular data indicate that the ‘Arenaria s.s. clade’ consists of a few well‐supported subgroups and that the current subgeneric classification of the genus does not reflect evolutionary history. Arenaria subgenus Leiosperma is clearly monophyletic, but we reduce it to sectional level. Our molecular data show that the monotypic Arenaria subgenera Porphyrantha and Arenariastrum are nested in A. subgenus Arenaria, whereas subgenus Eremogoneastrum is included in Eremogone. None of the species‐rich sections in subgenus Arenaria is monophyletic. © 2015 The Linnean Society of London, Botanical Journal of the Linnean Society, 2015, 178 , 648–669.     

Seed morphology and its systematic implications for genus Oxytropis DC. (Fabaceae)

In the present study, seeds of 13 Oxytropis DC. species (including two latest synonyms) classified in subg. Oxytropis (sect. Dolichocarpon, sect. Chrysantha and sect. Eumorpha), subg. Euoxytropis (sect. Orobia) and subg. Phacoxytropis (sect. Protoxytropis, sect. Janthina and sect. Mesogaea) from Turkey were examined using light and scanning electron microscopy to evaluate the taxonomic relevance of macro- and micro-morphological seed characters. As a result of the study, species-specific characters have been determined. Seeds exhibit variation in size, shape, surface sculpturing pattern, hilum position and weight. Seeds ranged from 1.61 to 4.04 mm in length and from 1.02 to 2.56 mm in width. Five different seed shapes were recognised, as prolonged semielliptic, reniform, prolonged reniform, quadratic and cardiform, with a length to width ratio ranging from 1.02 ± 0.08 to 1.75 ± 0.27. Rugulate, rugulate–reticulate and lophate sculpturing patterns were observed in the studied species. According to the results, seed characters, such as the size (length, width and the length/width ratio), the shape, the surface sculpturing and the weight appear to have low taxonomic value in distinguishing subgenera, sections and species.     

Micromorphology of fruits and seeds of Iranian Geranium (Geraniaceae), and its systematic significance

The fruit and seed micromorphology of 22 species of Geranium, representing the eight sections of the genus represented in Iran (G. sectt. Dissecta, Geranium, and Tuberosa of subgen. Geranium; sectt. Batrachioidea, Divaricata, Lucida, Ruberta and Trilopha of subgen. Robertium), have been examined by scanning electron microscopy (SEM). Macro‐ and micromorphological characters, including fruit and seed shape, size, color, hair type and density, mericarp ornamentations, hilum position, seed coat pattern, epidermal cell shape, and anticlinal and periclinal cell walls, are presented. Two microsculpturing patterns are recognized on the mericarp surface: reticulate and pusticulate. The micromorphology of the seed coat showed four distinctive cell patterns. The seed epidermis is constructed either of polygonal, elongated polygonal, or square to rectangular cells. The polygonal type is the most common among the studied species, but the variation in testa cell characters, their size and shape, may provide further information and useful diagnostic characters at specific and infraspecific rank. The shape and color of the seeds are, however, of little systematic value. Fruit characters were found to be important for separating taxa at infrageneric rank and our results show that the species can be separated into subgenera and sections based on fruit morphology.     

Micro‐morphological characteristics of seed and ovary trichomes of Iranian Glaucium Mill. species (Papaveraceae) and their taxonomic importance

Seeds and trichomes of 15 taxa of the genus Glaucium distributed in Iran were examined by light microscopy (LM) and scanning electron microscopy (SEM). The seeds are slightly shiny to rather shiny, however, strongly shiny seeds were also observed in some species (G. corniculatum and G. grandiflorum). The basic shape of the seeds is semicircular to reniform, but reniform and elongated reniform seeds were found in G. oxylobum and G. elegans, respectively. The sculpturing of the testa surface are verrucate–rugulate (most frequent type), verrucate–granulate, verrucate–perforate, verrucate–lineolate, rugulate–granulate, rugulate and ocellate. Elongated polygonal epidermal cells dominate in most taxa investigated, but there are polygonal and irregular polygonal cells in a few taxa. The investigated species have two types of trichomes on the ovary: tuberculate and non‐tuberculate. The non‐tuberculate trichomes are of two subtypes: pilose and squamiform. Based on the number of cells, the squamiform trichomes were further divided into two groups (uniseriate and multiseriate) differing in shape, size and cellular structure. The results show that the micro‐morphological characteristics of seed and ovary trichomes provide useful and significant information for separation of species and taxa within species and a diagnostic key to the taxa is provided.     

Fruit and seed morphology of the tribe Orobancheae (Orobanchaceae) genera in Turkey and its taxonomic significance

Seed and fruit morphology of four genera of Orobanchaceae: Cistanche, Diphelypaea, Orobanche and Phelipanche, native to Turkey, were studied using light and scanning electron microscopy. In this study, 100 accessions belonging to 39 species were investigated. The examined fruits had loculicidal capsules, generally dehiscing with 2 slits, and the seeds were small and with reticulate ornamentation. The basic shape of the seeds in most of the studied taxa was oblong, ellipsoid to ovoid, globose or subglobose. The results indicate that characters such as seed size, shape and color are useless for identification of the taxa at the species level. However, the anticlinal wall pattern and periclinal wall ornamentation proved useful for identifying the different genera. Four morphological types could be distinguished: smooth, perforate, microfibrillar and granulate. Type I corresponds to the genus Cistanche and Orobanche anatolica, whereas types II, III and IV were found in Diphelypaea, Orobanche and Phelipanche, respectively. The utility of seed characteristics is discussed in terms of inter‐ and intra‐generic taxonomy.     

Molecular phylogenetic evidence supports a new family of octocorals and a new genus of Alcyoniidae (Octocorallia,Alcyonacea)

Molecular phylogenetic evidence indicates that the octocoral family Alcyoniidae is highly polyphyletic, with genera distributed across Octocorallia in more than 10 separate clades. Most alcyoniid taxa belong to the large and poorly resolved Holaxonia–Alcyoniina clade of octocorals, but members of at least four genera of Alcyoniidae fall outside of that group. As a first step towards revision of the family, we describe a new genus, Parasphaerasclera gen. n., and family, Parasphaerascleridae fam. n., of Alcyonacea to accommodate species of Eleutherobia Pütter, 1900 and Alcyonium Linnaeus, 1758 that have digitiform to digitate or lobate growth forms, completely lack sclerites in the polyps, and have radiates or spheroidal sclerites in the colony surface and interior. Parasphaerascleridae fam. n. constitutes a well-supported clade that is phylogenetically distinct from all other octocoral taxa. We also describe a new genus of Alcyoniidae, Sphaerasclera gen. n., for a species of Eleutherobia with a unique capitate growth form. Sphaerasclera gen. n. is a member of the Anthomastus–Corallium clade of octocorals, but is morphologically and genetically distinct from Anthomastus Verrill, 1878 and Paraminabea Williams & Alderslade, 1999, two similar but dimorphic genera of Alcyoniidae that are its sister taxa. In addition, we have re-assigned two species of Eleutherobia that have clavate to capitate growth forms, polyp sclerites arranged to form a collaret and points, and spindles in the colony interior to Alcyonium, a move that is supported by both morphological and molecular phylogenetic evidence.     

Alpine community recruitment potential is determined by habitat attributes in the alpine ecosystems of the Himalaya‐Hengduan Mountains,SW China

The fragility and sensitivity to climate change of alpine ecosystems make it difficult to maintain the stability of their plant communities. Thus, it is important to determine which plant propagules are stored in the soils in order to understand community recruitment potential, especially under different environmental conditions. Based on a soil seed germination and seedling cultivation experiment, we aimed to identify differences in the soil seed attributes between three typical habitat types in the alpine subnival ecosystems of the Himalaya‐Hengduan Mountains and hence to predict the community recruitment potential of each of these different communities. We found that the seed assemblages in the soils differed between habitats. The most abundant taxa were from the genera Saxifraga, Kobresia, Arenaria, Polygonum, Draba, and Viola, while the taxa with lowest abundance were Apiaceae, Campanulaceae, Circaea, Crassulaceae, and Gentiana. Different habitats exhibited variable soil seed richness, diversity, and density. However, the patterns differed between study sites. Specifically, at Baima (BM) and Shika (SK) snow mountains, soil seed richness, diversity, and density were generally highest in grassland, followed by rock bed and bare ground. In contrast, on Jiaozi (JZ) snow mountain, the rock bed supported the highest soil seed richness and density, followed by grassland and bare ground. These results suggest that the attributes of habitats and communities can both affect the accumulation of soil seeds. Bare ground supports the lowest seed diversity and density but also harbors the most empty niches. We, therefore, predict that, once the thermal conditions become suitable as a result of global warming, this habitat has the potential to see greater changes than grassland and rock bed in terms of community recruitment.     

Pollen morphology of the genus Salvia L. (Lamiaceae) in Turkey

Pollen grains of 30 taxa of the genus Salvia, belonging to sections Salvia, Horminum, Drymosphace, Plethiosphace and Hemisphace from Turkey were examined by light (LM) and scanning electron microscopy (SEM). Detailed pollen morphological characteristics are provided for these taxa. Among the studied taxa, S. verticillata subsp. verticillata from sect. Hemisphace has the smallest pollen grains, and S. pachystachys from sect. Salvia possesses the largest ones. The basic shape of the pollen grains in most taxa is suboblate, oblate-spheroidal or prolate-spheroidal. However subprolate pollen grains are recorded for S. macrochlamys from sect. Salvia. The grains are hexacolpate in all taxa, but in S. recognita from sect. Salvia also octacolpate pollen was found. Three distinct exine sculpturing types exist, reticulate-perforate (the common type), reticulate-granulate and bireticulate. The reticulate-perforate and bireticulate sculpturing patterns can be divided into subtypes based on the number of perforations and the number of secondary lumina in each primary lumen. Pollen morphological characteristics of the taxa studied are compared and discussed on the basis of taxonomical concepts. In some cases, these characters are useful in distinguishing the sections. For instance, the presence of 1-2 large central secondary lumina per primary lumen is a significant character of sect. Horminum separating it from the other sections. As well, the presence of holes on colpus membrane ornamentation can be used as a diagnostic taxonomic character for sectional division between sect. Hemisphace and others. S. ballsiana from sect. Salvia is clearly distinct from the other taxa examined by its unique pollen morphology. Further, for several macromorphologically similar taxa pollen structures provide additional evidence to delimite them from each other.     

Systematic implications of flavonoid pigments in the fern genus hemionitis (adiantiaceae)

The closely related fern generaHemionitis L. andGymnopteris Bernhardi are separated primarily on differences in leaf architecture and venation. Studies indicate that these characters are highly variable and unreliably diagnostic. Further, the type species of the two genera readily hybridize with each other. Spore morphology, as exhibited by SEM, does not support the traditional alignment of the species in these two genera: some species ofHemionitis andGymnopteris have the same rugose to papillate spores, while other species from both genera possess crested spores. The flavonoid chemistry of these taxa coincides with spore type, i.e., taxa from both genera which possess crested spores produce kaempferol and quercetin 3-0-glycosides, while species with tuberculate spores produce only quercetin 3,4′-0-glycosides. The spore and chemical data suggest a realignment of these taxa within a single genus, which would avoid the rather tenuous dependence on a single vegetative character for generic distinctions.     

Phylogeny of Celastraceae tribe Euonymeae inferred from morphological characters and nuclear and plastid genes

The phylogeny of Celastraceae tribe Euonymeae (∼230 species in eight genera in both the Old and New Worlds) was inferred using morphological characters together with plastid (matK, trnL-F) and nuclear (ITS and 26S rDNA) genes. Tribe Euonymeae has been defined as those genera of Celastraceae with generally opposite leaves, isomerous carpels, loculicidally dehiscent capsules, and arillate seeds (except Microtropis). Euonymus is the most diverse (129 species) and widely cultivated genus in the tribe. We infer that tribe Euonymeae consists of at least six separate lineages within Celastraceae and that a revised natural classification of the family is needed. Microtropis and Quetzalia are inferred to be distinct sister groups that together are sister to Zinowiewia. The endangered Monimopetalum chinense is an isolated and early derived lineage of Celastraceae that represents an important component of phylogenetic diversity within the family. Hedraianthera is sister to Brassiantha, and we describe a second species (Brassiantha hedraiantheroides A.J. Ford) that represents the first reported occurrence of this genus in Australia. Euonymus globularis, from eastern Australia, is sister to Menepetalum, which is endemic to New Caledonia, and we erect a new genus (Dinghoua R.H. Archer) for it. The Madagascan species of Euonymus are sister to Pleurostylia and recognized as a distinct genus (Astrocassine ined.). Glyptopetalum, Torralbasia, and Xylonymus are all closely related to Euonymus sensu stricto and are questionably distinct from it. Current intrageneric classifications of Euonymus are not completely natural and require revision.