A critical evaluation of the Oscillayers methods and datasets

Here we evaluate Oscillayers, a new method that aims to estimate palaeoclimates for the past 5.4 Myr, and discuss the associated theoretical and methodological issues. We show that the theoretical foundation of Oscillayers is inherently limited, because the method cannot incorporate spatio‐temporal variation and different forcing mechanisms into climate reconstructions. In addition, several methodological weaknesses are clarified that entrench the palaeoclimatic reconstruction of Oscillayers to patterns of climate change observed between the Last Glacial Maximum and current climates. We test the utility of the Oscillayers method to produce palaeoclimatic reconstructions that are similar to general circulation model (GCM)‐based estimates. On average, only 55.6% of values in the mean annual temperature datasets across the Pliocene and Pleistocene were within ±3°C when compared with corresponding GCM‐based datasets. Furthermore, on average only 75.3% of values in the mean annual precipitation datasets across the Pliocene and Pleistocene were within ±200 mm of rainfall of the GCM‐based estimates. Our results demonstrate that the Oscillayers approach does not provide a robust approximation of palaeoclimatic conditions throughout the Plio‐Pleistocene. Thus, when these datasets are used for scientific analyses, the results should be interpreted with a full appreciation of their limitations, particularly for periods outside the last glacial cycle.     

Non-electrolyte permeability of plant cuticles: A critical evaluation of experimental methods

A method for measurement of non-electrolyte transport through enzymatically isolated cuticles of Ficus elastica Roxb. var. decora is presented. Permeance coefficients and hold-up times are determined under steady-state conditions. The transport system consists of two small reservoirs separated by the cuticle. The compounds tested (4-nitrophenol and pentachlorophenol) differ widely in lipid solubility and enable a critical evaluation of the apparatus used. The sorption capacity of the cuticle for lipophilic compounds is related to their cuticle/water partition coefficients. The problems of unstirred layers and of membrane integrity are discussed. The permeances measured ranged from 10⁻¹¹ to 10⁻⁵ m s⁻¹, the hold-up times from 50 s to 22 h.     

Optimization theory of stomatal behaviour II. Stomatal responses of several tree species of north Australia to changes in light, soil and atomospheric water content and temperature

In a companion paper several methods of calculating the marginal unit water cost of plant carbon gain (E/A) were tested to determine whether stomata were behaving optimally in relation to regulating leaf gas exchange. In this paper one method is applied to several tropical tree species when leaf-to-air vapour pressure difference (D), photosynthetic photon flux density, leaf temperature, and atmospheric soil water availability were manipulated. The response of leaves that had expanded during the dry season were also compared to that of leaves that had expanded in the wet season. Few differences in absolute value of E/A, or the form of the relationship, were observed between species or between seasons. In the majority of species, E/A increased significantly as either leaf-to-air vapour pressure difference increased, at a leaf temperature of either 33C or 38C, or as in photosynthetic photon flux density increased. In contrast, as leaf temperature increased at constant D, E/A was generally constant. As pre-dawn water potential declined, E/A declined. The relationship between E/A and D did not differ whether internal or ambient carbon dioxide concentration were kept constant. It is concluded that stomata are only behaving optimally over a very small range of D. If a larger range of D is used, to incorporate values that more closely reflect those experienced by tropical trees in a savanna environment optimization is incomplete.Key words: Stomatal optimization theory, marginal unit water cost.      

Light and stomatal metabolism : I. Possible involvement of light modulation of enzymes in stomatal movement

New evidence is provided regarding the direct effect of light on stomatal opening in the epidermis of the pea (Pisum sativum L. var Little Marvel) leaf. Light modulates the activity of a number of key enzymes involved in stomatal metabolism. When isolated epidermal strips are illuminated, phosphoenolpyruvate carboxylase, NADP-malate dehydrogenase, and NADP-isocitrate dehydrogenase are activated; and aspartate aminotransferase is inactivated. Sulfhydryl compounds, dithiothreitol and glutathione, enhance stomatal opening in epidermal strips both in light or darkness while the sulfhydryl reagent N-ethylmaleimide inhibits, indicating the possible involvement of sulfhydryl groups in stomatal movements. Further, light treatment increases measureable thiol levels in the epidermis about 3-fold. These results suggest that light modulation of enzymes in the epidermis may play a significant role in the mechanism of stomatal movement.     

Magnetic fluid hyperthermia simulations in evaluation of SAR calculation methods

PurposeThe purpose of this study is to employ magnetic fluid hyperthermia simulations in the precise computation of Specific Absorption Rate functions -SAR(T)-, and in the evaluation of the predictive capacity of different SAR calculation methods.MethodsMagnetic fluid hyperthermia experiments were carried out using magnetite-based nanofluids. The respective SAR values were estimated through four different calculation methods including the initial slope method, the Box-Lucas method, the corrected slope method and the incremental analysis method (INCAM). A novel numerical model combining the heat transfer equations and the Navier-Stokes equations was developed to reproduce the experimental heating process. To address variations in heating efficiency with temperature, the expression of the power dissipation as a Gaussian function of temperature was introduced and the Levenberg-Marquardt optimization algorithm was employed to compute the function parameters and determine the function’s effective branch within each measurement’s temperature range. The power dissipation function was then reduced to the respective SAR function.ResultsThe INCAM exhibited the lowest relative errors ranging between 0.62 and 15.03% with respect to the simulations. SAR(T) functions exhibited significant variations, up to 45%, within the MFH-relevant temperature range.ConclusionsThe examined calculation methods are not suitable to accurately quantify the heating efficiency of a magnetic fluid. Numerical models can be exploited to effectively compute SAR(T) and contribute to the development of robust hyperthermia treatment planning applications.     

A mathematical theory of protoplasmic protrusions. I

The theory of cellular elongations is applied to a particular case of a spherical cell with a cylindrical protrusion under the conditions of equilibrium, and conditions for continued and arrested growth are examined.     

Patchy stomatal conductance: emergent collective behaviour of stomata

Until recently, most scientists have tacitly assumed that individual stomata respond independently and similarly to stimuli, showing minor random variation in aperture and behaviour. This implies that stomatal behaviour should not depend on the scale of observation. However, it is now clear that these assumptions are often incorrect. Leaves frequently exhibit dramatic spatial and temporal heterogeneity in stomatal behaviour. This phenomenon, in which small 'patches' of stomata respond differently from those in adjacent regions of the leaf, is called 'patchy stomatal conductance'. It appears to represent a hitherto unknown type of emergent collective behaviour that manifests itself in populations of stomata in intact leaves.     

On the critical behaviour of simple epidemics.

We show how ideas and models which were originally introduced to gain an understanding of critical phenomena can be used to interpret the dynamics of epidemics of communicable disease in real populations. Specifically, we present an analysis of the dynamics of disease outbreaks for three common communicable infections from a small isolated island population. The strongly fluctuating nature of the temporal incidence of disease is captured by the model, and comparisons between exponents calculated from the data and from simulations are made. A forest-fire model with sparks is used to classify the observed scaling dynamics of the epidemics and provides a unified picture of the epidemiology which conventional epidemiological analysis is unable to reproduce. This study suggests that power-law scaling can emerge in natural systems when they are driven on widely separated time-scales, in accordance with recent analytic renormalization group calculations.     

Salmonella serotype typhimurium phage typing. A critical evaluation

Of 12,930 Salmonella serotype typhimurium strains, phage typed during 1985-1988, 45.68% were "nontypable" by Anderson's set; the percent of typable strains decreased from 54.17 in 1986 to 30.54 in 1988. Of 90 phage patterns of sensitivity, 22 were currently encountered. Phage types 1, 18 and 104 were most frequent to strain of both human and non-human origin. In food generating S. typhimurium outbreaks, phage types 1 and 36 were prevalent. Except lysotypes 198 and 95, isolated from "single cases" in man only, all other phage types were common in man and animals, too. Introducing other typing methods to serotype typhimurium "nontypable" strains (by Anderson's set) was considered necessary for epidemiological purposes.     

A calculation of the probability of spontaneous biogenesis by information theory.

The Darwin-Oparin-Haldane “warm little pond” scenario for biogenesis is examined by using information theory to calculate the probability that an informational biomolecule of reasonable biochemical specificity, long enough to provide a genome for the “protobiont”, could have appeared in 10⁹ years in the primitive soup. Certain old untenable ideas have served only to confuse the solution of the problem. Negentropy is not a concept because entropy cannot be negative. The role that negentropy has played in previous discussions is replaced by “complexity” as defined in information theory. A satisfactory scenario for spontaneous biogenesis requires the generation of “complexity” not “order”. Previous calculations based on simple combinatorial analysis over estimate the number of sequences by a factor of 10⁵. The number of cytochrome c sequences is about 3·8 × 10⁶¹. The probability of selecting one such sequence at random is about 2·1 ×10^?65. The primitive milieu will contain a racemic mixture of the biological amino acids and also many analogues and non-biological amino acids. Taking into account only the effect of the racemic mixture the longest genome which could be expected with 95 % confidence in 10⁹ years corresponds to only 49 amino acid residues. This is much too short to code a living system so evolution to higher forms could not get started. Geological evidence for the “warm little pond” is missing. It is concluded that belief in currently accepted scenarios of spontaneous biogenesis is based on faith, contrary to conventional wisdom.     

A critical evaluation of the available methods for the determination of factor VIII von Willebrand

Von Willebrand factor (vWf) is the major component of the circulating factor VIII complex. The von Willebrand molecule includes factor VIII related antigen (VIIIR: Ag) which represents the molecular substrate of the von Willebrand activity expressed as Ristocetin cofactor (VIIIR:RCoF) activity. Several methods have been developed for VIIIR: Ag evaluation, among the first being the rocket-immunoelectrophoresis method of LAURELL. Radial immunodiffusion (MANCINI's method) was also used. Subsequently, radioimmunological assays, either as radioimmunoassay (RIA) or immunoradiometric assay (IRMA), were developed with improvements in sensitivity, so that levels of VIIIR: Ag lower than 0.1% of normal can be detected. More recently, an enzyme-linked immunosorbent assay (ELISA), characterized by the use of enzyme-conjugated antibody was proposed. This method shows a sensitivity similar to immunoradiometric methods but without using any dangerous reagent. Finally, a nephelometric method was proposed for factor VIII antigen evaluation. For a qualitative evaluation of von Willebrand factor crossed-immunoelectrophoresis and multimeric analysis can be used. In the first case, the use of precipiting antibodies against von Willebrand factor may demonstrate a peak with different characteristics related to the biochemical property of von Willebrand. Multimeric analysis in SDS-agarose gel electrophoresis followed by staining with labelled antifactor VIII antibodies gives information about different polymeric forms of circulating VIII/vW factor. Von Willebrand factor activity, expressed as its ability to induce platelet aggregation in the presence of the antibiotic Ristocetin, can be carried out using normal formalin fixed platelets, either with aggregometer or visual methods (glass slide test or tubes test and microtritation plate). The corrected evaluation of factor VIII complex by all these techniques together with the clotting activity assay allows a satisfactory study of factor VIII properties.