Modelling the abundance of a non-native mollusk in tropical semi-arid reservoirs

Hydrobiologia - This study aimed to investigate the relative importance of abiotic factors and biotic resistance (expressed as species richness of native macroinvertebrates), through a correlative...     

Survival estimates of bird species across altered habitats in the tropical Andes

The probability of long‐term persistence of a population is strongly determined by adult survival rates, but estimates of survival are currently lacking for most species of birds in the tropical Andes, a global biodiversity hotspot. We calculated apparent survival rates of birds in the Ecuadorian tropical Andes using a moderately long‐term (11 yr) capture–recapture dataset from three habitats that varied in how much they had been modified by human activities (native forest, introduced forest, and shrubs). We fit mark–recapture models for 28 species with habitat as a covariable. For all species, recapture rates between sampling sessions were low and varied from 0.04 for Rainbow Starfrontlets (Coeligena iris) to 0.41 for Stripe‐headed Brushfinches (Arremon assimilis) when averaged across all occupied habitats. Annual survival rates varied from 0.07 for Black‐crested Warblers (Margarornis squamiger) to 0.75 for Violet‐throated Metaltails (Metallura baroni). We found no significant differences in survival rates either among habitats or species grouped by habitat specialization. Because we found similar survival rates in native forest and human‐modified habitats, our results support those of recent studies concerning the potential value of secondary habitats for the conservation of some species of birds in the tropics. However, our conclusions are tempered by the uncertainty around the estimates of survival rates. Despite the relatively long‐term nature of our study, obtaining survival estimates for bird species in this region was challenging, and either more years of study or modification of field protocols may be needed to obtain more precise survival estimates.     

Seasonal patterns in butterfly abundance and species diversity in four tropical habitats in northern Western Ghats

In northern Western Ghats (India), four tropical habitats with different disturbance levels were monitored for diversity and seasonal patterns in butterfly communities. Species richness was highest in late monsoon and early winter. Majority of the butterfly species also showed abundance peaks in these seasons. Fire played a significant role in determining species composition in fire-afflicted areas and affected flight periods of some species but did not affect species richness. Grazing had a major impact on species composition and it favoured only those Lycaenids and Nymphalids whose caterpillars feed on herbs. In case of one of the sites where phenophases of the larval foodplant and population trend of a small Lycaenid was documented, the population showed rapid increase at the time when the plants were in suitable phenophase for growth of the caterpillars. A possible evolutionary interaction between herb-feeding and non-herb-feeding Lycaenids is proposed.     

A comparison of two survey methods for assessing bird species richness and abundance in tropical farmlands

Capsule Although most birds do not need to refuel en route, many stop at Sandgerdi for a short period.     

Grazing in remnant wetland habitats in an arid region: direct and indirect effects on two specialist bird species

Capsule: Grazing by livestock can have complex effects on drivers of population change in the Clamorous Reed Warbler Acrocephalus stentoreus and Dead Sea Sparrow Passer moabiticus.

Aims: To investigate the effect on two specialist bird species on wetland degradation in the Jordan Valley.

Methods: The direct and indirect effects of grazing on the probability of occurrences of two specialist bird species, Clamorous Reed Warbler A. stentoreus and Dead Sea Sparrow P. moabiticus, were analysed during the breeding season at the patch scale, using path analysis.

Results: Tamarix shrub density was a strong predictor for the presence of both species. Grazing had a negative total effect on both; a significant indirect effect on Dead Sea Sparrow via its impact on the mean height of shrubs, and a significant, negative indirect effect on Clamorous Reed Warbler by reducing reed cover. Intensive grazing and browsing by livestock including goats, sheep and camels, apparently had a negative effect on the overall density of native Tamarix shrubs, while promoting encroachment by invasive Prosopis juliflora.

Conclusion: This may be part of a long-term cascade leading to an ecological transition and loss of important wetland habitats in the arid Jordan Valley.     

Annual plants in arid and semi-arid desert regions

Annual plants are the main vegetation in arid and semi-arid desert regions.Because of their unique traits,they are the optimal experimental subjects for eco-logical studies.In this article,we summarize annual plants' seed germination strategies,seedling adaptability mechanism to environments,seed dispersal,and soil seed banks.We also discuss the biotic and abiotic factors affecting the composition and dynamics of annual plant populations and communities.Because annual plants have important ecological functions in desert vegetation systems,this study on annual plants will be of great bene-fit to the conservation and restoration of desert ecosys-tems,the rational utilization of resources,and the sustainable development of desert regions.     

Annual plants in arid and semi-arid desert regions

Annual plants are the main vegetation in arid and semi-arid desert regions. Because of their unique traits, they are the optimal experimental subjects for ecological studies. In this article, we summarize annual plants’ seed germination strategies, seedling adaptability mechanism to environments, seed dispersal, and soil seed banks. We also discuss the biotic and abiotic factors affecting the composition and dynamics of annual plant populations and communities. Because annual plants have important ecological functions in desert vegetation systems, this study on annual plants will be of great benefit to the conservation and restoration of desert ecosystems, the rational utilization of resources, and the sustainable development of desert regions. __________ Translated from Chinese Journal of Ecology, 2006, 25(7): 851–856 [译自: 生态学杂志]     

Bat species richness and abundance in tropical rain forest fragments and in agricultural habitats at Los Tuxtlas, Mexico

Faced with the rapid and extensive conversion of tropical rain forests to pasture lands and agricultural fields and with the need to preserve the remaining mammalian fauna, it is imperative to determine how the different species that form the mammalian community have responded to the anthropogenic alterations of their natural habitats To provide data in this direction, we sampled bats m 45 forest islands, m 20 agricultural habitats representing five types of vegetation (cocoa, coffee, mixed, citrus and allspice), in four live-fence sites and in four pasture sites at Los Tuxtlas, Veracruz, Mexico Sampling effort resulted in the capture of 2587 bats representing 35 species In forest habitats we detected 32 species We did not capture any bats at the four pasture sites, but the at the other agricultural habitats studied, we captured 38% of the bats and 77% of the species recorded Thirty-four percent of the species recorded were present at the live-fence habitats Isolating distance was an important variable influencing species richness in forests and in agricultural habitats Only 10% of the species recorded occurred m all the habitats studied, but 77% of the species occurred m a habitat other than ram forest Recaptures of bats indicated inter habitat movements in the fragmented landscape We discuss the conservation value for the bat fauna of agricultural islands of vegetation as elements reducing isolating distances among forest fragments     

The relationship between fish species richness, abundance and habitat complexity in a range of shallow tropical marine habitats

A simple habitat assessment score (HAS) was designed to assess habitat complexity across several different shallow tropical marine habitats including sandy patches, algal beds, seagrass beds and reefs. It measured rugosity, variety of growth forms, height, refuge size categories, percentage live cover and percentage hard substratum. Multiple regression models using HAS variables as predictors accounted for 71 and 22% of the variation in observed species richness and total fish abundance respectively. The two most important predictors of observed species richness were rugosity and variety of growth forms, while height was the most important predictor of total fish abundance. The HAS method worked consistently across a variety of habitat types and the complexity map closely mirrored the map of observed species richness, reflecting the patchy habitat mosaic of shallow tropical marine areas. Stations at the mouth of an enclosed lagoon, however, had a higher number of species than might have been expected judging from the habitat complexity scores. It is possible that this was linked to the preferential settling of pelagic fish larvae in this area as tidal water exchanges between the bay and the reef were funnelled through one small gap. This study highlights the need for fish biodiversity studies to take habitat complexity into account.     

Lipid accumulation in prokaryotic microorganisms from arid habitats

This review shall provide support for the suitability of arid environments as preferred location to search for unknown lipid-accumulative bacteria. Bacterial lipids are attracting more and more attention as sustainable replacement for mineral oil in fuel and plastic production. The development of prokaryotic microorganisms in arid desert habitats is affected by its harsh living conditions. Drought, nutrient limitation, strong radiation, and extreme temperatures necessitate effective adaption mechanisms. Accumulation of storage lipids as energy reserve and source of metabolic water represents a common adaption in desert animals and presumably in desert bacteria and archaea as well. Comparison of corresponding literature resulted in several bacterial species from desert habitats, which had already been described as lipid-accumulative elsewhere. Based on the gathered information, literature on microbial communities in hot desert, cold desert, and humid soil were analyzed on its content of lipid-accumulative bacteria. With more than 50% of the total community size in single studies, hot deserts appear to be more favorable for lipid-accumulative species then humid soil (≤20%) and cold deserts (≤17%). Low bacterial lipid accumulation in cold deserts is assumed to result from the influence of low temperatures on fatty acids and the increased necessity of permanent adaption methods.

     

Nebkhas origination in arid and semi-arid regions: An overview

The evolution processes of nebkhas, including origination (from scratch) and growth thereafter (from small to large) are the typical example of how vegetation shapes landforms, and are associated with regional aeolian activity and sandy desertification. Because the evolution processes are complex, we have only reviewed current literature related to the conditions and age of nebkhas origination and how the origination conditions have been met in arid and semi-arid regions in order to understand the origination mechanisms. Our overview suggests that: (1) Moisture levels must be sufficient to support shrub development, but surfaces must be sufficiently dry to ensure an adequate sand source for nebkhas origination. Whether and when nebkhas origination in a region will depend on whether and when regional moisture levels and available sand supplies achieve a dynamic balance; (2) Most extant nebkhas originated within the last 1000 years, and older nebkhas are fully active due to the death of shrub, therefore nebkhas are more ephemeral than non-phytogenic dunes; (3) The origination of nebkhas is triggered by deterioration in regional moisture levels, which may result from climate change, anthropogenic activities, or a combination of these factors; (4) Nebkhas studies have mainly focused on the extremely arid regions, and have largely ignored farming-pastoral areas affected by anthropogenic activity; (5) Researchers have only sampled a small number of nebkhas in a given region (often only one), even though nebkhas consisting of different shrub species, different evolution stages, and different forms can coexist in that region; (6) To accurately understand the origination mechanisms of nebkhas, we must base our research on extensive and comprehensive regional data on origination age of the massive nebkhas.     

Distribution and abundance of fish in deep-sea coral habitats

Experimental fishing with long-lines and gillnets was conducted on the continental shelf off southwestern Norway between 150 and 350 m depth. Abundance and distribution of redfish (Sebastes marinus L., 1758), ling (Molva molva L., 1758), and tusk (Brosme brosme Ascanius, 1772) were quantified in Lophelia pertusa (L., 1758) coral reefs and in non-coral habitats. The largest catches of redfish were made with long-line fleets set in coral reef habitats. Ling and tusk were also most numerous in coral habitats, although not statistically significant. Fish caught in coral habitats tended to be larger in size than in non-coral habitats. The diet of redfish, tusk and ling included the same prey groups in all habitats, but they differed at the species level. Lophelia-reefs may provide a profitable feeding place for tusk. For the planktivorous Sebastes, on the other hand, their affinity to the reefs seems primarily to be related to the physical structure offered by the reefs.     

Variations in nitrogen-15 natural abundance of plant and soil systems in four remote tropical rainforests, southern China

The foliar stable N isotope ratio (δ¹⁵N) can provide integrated information on ecosystem N cycling. Here we present the δ¹⁵N of plant and soil in four remote typical tropical rainforests (one primary and three secondary) of southern China. We aimed to examine if (1) foliar δ¹⁵N in the study forests is negative, as observed in other tropical and subtropical sites in eastern Asia; (2) variation in δ¹⁵N among different species is smaller compared to that in many N-limited temperate and boreal ecosystems; and (3) the primary forest is more N rich than the younger secondary forests and therefore is more ¹⁵N enriched. Our results show that foliar δ¹⁵N ranged from ?5.1 to 1.3 ‰ for 39 collected plant species with different growth strategies and mycorrhizal types, and that for 35 species it was negative. Soil NO₃ ^? had low δ¹⁵N (?11.4 to ?3.2 ‰) and plant NO₃ ^? uptake could not explain the negative foliar δ¹⁵N values (NH₄ ⁺ was dominant in the soil inorganic-N fraction). We suggest that negative values might be caused by isotope fractionation during soil NH₄ ⁺ uptake and mycorrhizal N transfer, and by direct uptake of atmospheric NH₃/NH₄ ⁺. The variation in foliar δ¹⁵N among species (by about 6 ‰) was smaller than in many N-limited ecosystems, which is typically about or over 10 ‰. The primary forest had a larger N capital in plants than the secondary forests. Foliar δ¹⁵N and the enrichment factor (foliar δ¹⁵N minus soil δ¹⁵N) were higher in the primary forest than in the secondary forests, albeit differences were small, while there was no consistent pattern in soil δ¹⁵N between primary and secondary forests.     

Generalizability of neotropical bird abundance and richness models

Predicting the consequences of land-cover change on tropical biotas is a pressing task. However, testing the applicability of models developed with data from one region to another region has rarely been done. Bird faunas were sampled along 3.0-km routes in southern Costa Rica (Coto Brus) to develop statistical models to describe the abundance and richness of groups as a function of land-cover characteristics. The relative value of the land-cover models was assessed by comparing them with null models. The generalizability of the models was tested with data from north-western Costa Rica (Monteverde) to determine whether the models were applicable to another area that has undergone significant land-cover change in the last 60 years. The richness and abundance of understory, open-country and edge non-insectivore groups showed clear relationships with land-cover variables, and the land-cover models had lower prediction errors than the null models for Coto Brus. With one exception, useful models for canopy birds, edge insectivores and hummingbirds could not be developed. The land-cover models of abundance of canopy insectivores, understory insectivores and non-insectivores, and edge non-insectivores were generalizable to Monteverde whereas the land-cover models of abundance of open-country birds and species richness for any of the groups were not better than null models for Monteverde. The results indicate that land-cover models that describe the abundance or richness of various bird groups provide useful predictions in the area where the data were collected and that models of abundance of some canopy, understory and edge birds may perform well in areas that are similar in elevation, life zones and land use to the area from which data were collected. Land-cover models of the abundance of other groups, and of the richness of the majority of groups, may be less generalizable to other areas, or it may be difficult to develop models at all.     

Remote sensing‐based landscape indicators for the evaluation of threatened‐bird habitats in a tropical forest

Avian species persistence in a forest patch is strongly related to the degree of isolation and size of a forest patch and the vegetation structure within a patch and its matrix are important predictors of bird habitat suitability. A combination of space‐borne optical (Landsat), ALOS‐PALSAR (radar), and airborne Light Detection and Ranging (LiDAR) data was used for assessing variation in forest structure across forest patches that had undergone different levels of forest degradation in a logged forest—agricultural landscape in Southern Laos. The efficacy of different remote sensing (RS) data sources in distinguishing forest patches that had different seizes, configurations, and vegetation structure was examined. These data were found to be sensitive to the varying levels of degradation of the different patch categories. Additionally, the role of local scale forest structure variables (characterized using the different RS data and patch area) and landscape variables (characterized by distance from different forest patches) in influencing habitat preferences of International Union for Conservation of Nature (IUCN) Red listed birds found in the study area was examined. A machine learning algorithm, MaxEnt, was used in conjunction with these data and field collected geographical locations of the avian species to identify the factors influencing habitat preference of the different bird species and their suitable habitats. Results show that distance from different forest patches played a more important role in influencing habitat suitability for the different avian species than local scale factors related to vegetation structure and health. In addition to distance from forest patches, LiDAR‐derived forest structure and Landsat‐derived spectral variables were important determinants of avian habitat preference. The models derived using MaxEnt were used to create an overall habitat suitability map (HSM) which mapped the most suitable habitat patches for sustaining all the avian species. This work also provides insight that retention of forest patches, including degraded and isolated forest patches in addition to large contiguous forest patches, can facilitate bird species retention within tropical agricultural landscapes. It also demonstrates the effective use of RS data in distinguishing between forests that have undergone varying levels of degradation and identifying the habitat preferences of different bird species. Practical conservation management planning endeavors can use such data for both landscape scale monitoring and habitat mapping.     

Alien plant assemblages near roads in arid and semi-arid South Africa

Herbaceous and woody alien plants visible from a moving vehicle were recorded along 1 km roadside transects at 5 km intervals over a distance of 5869 km in the semi-arid and arid Fynbos, Succulent Karoo, Nama Karoo and Arid Savanna (Kalahari) biomes in South Africa. Each 1 km transect was classified by biome and vegetation type, mean annual rainfall, rainfall seasonality, soil surface type and landuse adjoining the roadside. Although travelling speed affected the range and frequency of plant species observed, the method was repeatable at a speed of 100 km h^?1. Alien plants occurred in 98% of 119 Fynbos, 81% of 204 Succulent Karoo, 72% of 661 Nama Karoo, 47% of 171 Arid Savanna and 100% of seventeen Grassland transects. Alien species richness per site was correlated with mean annual rainfall, but in all regions, sites adjacent to cultivation had significantly more alien species than sites adjoining rangeland. The alien plant assemblage of the arid winter-rainfall Succulent Karoo included species from mesic winter-rainfall lowland Fynbos and the arid Nama Karoo receives unseasonal rainfall. The frequencies of Prosopis spp., Atriplex spp. and Opuntia ficus-indica were not significantly greater near cultivation, and these perennial plants, all of which are dispersed by indigenous and domestic animals, can invade natural rangeland in arid and semi-arid southern Africa.