大伏革菌防治针叶树根腐病的研究进展

叶树根腐病是北温带地区一种重要的森林病害,其病原为异担子菌Heterobasidion,应用大伏革菌对该病害进行生物防治是目前最常用的方法。而随着分子生物学、转录组学及基因组学的发展,未来的研究重点将集中在与大伏革菌拮抗效率相关的基因上。从异担子菌的防治入手,重点阐述了用大伏革菌防治针叶树根腐病的国内外研究进展,包括大伏革菌防病历史、商业化制剂产生、防病机制、生态影响和筛选过程等。     

大伏革菌产纤维素酶条件优化及高效菌株筛选

真菌胞外纤维素酶活可作为高效生防菌株筛选的指标之一,通过测定野生大伏革菌(Phlebiopsis gigantea)菌株在最优条件下所产生纤维素酶活力高低来达到筛选防治针叶树根腐病高效菌株的目的。以大伏革菌菌株液体培养过程中纤维素酶活力为指标,通过单因素和正交试验结合的方法,筛选出大伏革菌最适产纤维素酶条件为(g/L):葡萄糖30.00,蛋白胨5.00,磷酸二氢钾3.00,硫酸镁1.50,装液量120 mL/250 mL,接种量5%(V/V),初始pH为4.0。测定野生大伏革菌菌株纤维素酶活力的大小显示:08077号菌株纤维素酶活力最大,13025号菌株最小。研究得出08077号菌株比芬兰商业化生物制剂Rotstop-F具有更好的防治中国小孔异担子菌的潜能。     

远志内生真菌分离鉴定及活性筛选

从两个不同生长时期野生远志中分离内生真菌菌株88株,隶属于28个属,研究了各菌株对3种指示菌的拮抗作用。结果表明,远志不同生长时期不同部位的内生真菌数量、分布、种群存在差异,其优势属为Alternaria Nees。茎中内生真菌种类较多。88株内生真菌中有73株菌至少能拮抗1种指示菌,占总菌数的83.0%。4株抗性较强的菌株分别隶属于Trichothecium Link、Cephalosporium Corda、Alternaria Nees、Dactuliophora C.L.等。     

水稻恶苗病拮抗菌的筛选、鉴定及其抑菌活性

从水稻根际土壤中筛选出拮抗水稻恶苗病的菌株,初步研究其抑菌作用及生防效果。采用平板稀释法从水稻根际土壤中分离获得菌株,以水稻恶苗病菌为靶标菌采用平板对峙法筛选出拮抗菌;通过形态学特征、生理生化特征及16S r DNA序列分析对筛选出的拮抗菌进行鉴定;检测拮抗菌无菌发酵液对水稻恶苗病菌菌丝生长的影响,同时测定拮抗菌的抑菌谱及进行盆栽实验。分离得到6株拮抗菌,其中有一株对水稻恶苗病菌拮抗作用较强的菌株SH15,经鉴定菌株SH15为多粘类芽孢杆菌。菌株无菌发酵液对水稻恶苗病菌菌丝生长有显著抑制作用;菌株SH15抑菌谱广,对水稻恶苗病菌、层出镰孢菌、棉花枯萎病菌、辣椒疫病菌、棉花黄萎病、黄瓜黑斑病菌均有一定的抑菌活性。水稻盆栽实验表明,接种多粘类芽孢杆菌SH15可显著降水稻恶苗病的发病指数,平均防效高达65.68%。因此,多粘类芽孢杆菌SH15在水稻恶苗病的生物防治方面具有一定的应用价值。     

桑树内生拮抗菌的分离鉴定及其对桑断枝烂叶病的生防初探

【目的】本研究从健康桑树茎中分离筛选对桑断枝烂叶病菌具显著拮抗作用的内生细菌,为该病生物防治奠定研究基础。【方法】采用组织培养法分离桑树内生菌,抑菌圈法和平板对峙法筛选抑菌活性稳定的内生拮抗菌;根据形态学、生理生化特征检测和基于16SrDNA、gyrA和gyrB基因的系统发育分析对拮抗菌进行菌种鉴定;利用抑菌圈法测定拮抗菌株活性发酵液热稳定性,菌丝生长速率法检测活性发酵液抑菌谱;并通过观察拮抗菌对桑断枝烂叶病菌BoeremiaexiguaGXH1菌株生长及菌丝形态的影响,扩增抑菌活性物质合成关键基因,以及采用酸沉淀法提取拮抗菌株脂肽类化合物并进行高效液相色谱串联质谱分析(LC-MS),初步探究可能的抑菌机制。【结果】从健康桑树茎中共分离获得17株桑树内生细菌,并从中筛选获得一株对桑断枝烂叶病菌B.exiguaGXH1有稳定拮抗作用的桑树内生细菌NPJ13菌株。该菌株形态学、生理生化特征与芽孢杆菌属一致,基于16SrDNA、gyrA和gyrB基因序列的系统发育分析结果显示该菌株与贝莱斯芽孢杆菌(Bacillusvelezensis)的亲缘关系最近,且处于系统发育树的最小分枝,故将NPJ13菌株鉴定为贝莱斯芽孢杆菌,命名为B. velezensis NPJ13。NPJ13菌株对灰霉病菌SWU5、核地杖菌SXSG-5、核盘菌PZ-2及烟草疫霉SWU20等12种病原真菌具有不同程度的拮抗作用,其活性发酵液具有较好的热稳定性。NPJ13菌株会导致桑断枝烂叶病菌GXH1菌丝发生扭曲、膨大、透明度增加、断裂等畸变现象;基因检测结果显示NPJ13菌株基因组中具有PKSI、NRPS、Sfp、ItuD、Srfc等5种抑菌活性物质合成关键基因,LC-MS检测结果表明菌株NPJ13脂肽类粗提物中含有表面活性素和伊枯草菌素。【结论】本研究分离筛选获得一株对桑断枝烂叶病菌具有显著拮抗作用的桑树内生细菌B. velezensis NPJ13菌株,为桑断枝烂叶病的生物防治提供了候选菌株。     

一株白芍内生放线菌的分离、活性及系统发育分析

目的:分离白芍中拮抗农作物致病菌和人类常见病原菌的内生放线菌,并进行系统发育分析。方法:采用3种分离培养基,从白芍根部分离内生放线菌;通过滤纸片法筛选具有拮抗活性的菌株,观察菌丝形态,并进行16S rDNA序列系统发育分析。结果:从白芍中分离得到16株内生放线菌,其中从FYSCA培养基中分离到9株;16株内生放线菌中有6株具有拮抗作用,菌株S-BS033004对5种病原菌有拮抗活性,尤其是对棉花黄萎病菌和小孢拟盘多毛孢菌和耐青霉素类金黄色葡萄球菌的拮抗作用显著,抑菌圈≥20mm。经16S rDNA系统发育分析表明该菌株与Streptomyces anulatus NBRC13369T等6株链霉菌模式菌株亲缘关系较近,相似性均为99.7%。结论:白芍内生放线菌S-BS033004是一株杀菌谱较广的链霉菌,具有很好的开发潜力。     

黄瓜青枯病内生拮抗菌株的分离及ARDRA分析

在黄瓜生长的不同阶段从根系分离内生细菌共469株。通过青枯菌平板拮抗试验,从中筛选到具明显拮抗作用的菌株59株。将内生拮抗菌纯培养物扩增近全长的16SrDNA并用限制性内切酶AluⅠ对PCR产物进行ARDRA(amplifiedrDNArestrictionanalysis)多态性分析,共得到5种不同的操作分类单元(OperationalTaxonomicUnit,OTU)。其中属于OTU1共有39株分离物,占内生拮抗菌总数的66%,为优势种群。进一步通过ERIC-PCR指纹图的方法在菌株水平上分析OTU1类群。结果表明,OTU1可分为12种不同的菌株,其中菌株HE-1和HE-2在黄瓜生长的5个不同阶段均可分离到。通过标记天然不具有利福平抗性的HE-1和HE-2菌株,获得抗利福平突变体菌株,回收检测结果表明,在栽培的不同时期,黄瓜植株根内均有HE-1和HE-2菌株的定殖。经防病效果的盆栽试验,发现HE-1和HE-2的浸种处理能有效降低黄瓜青枯病的病发率,与对照比较差异显著。因此确定HE-1和HE-2为黄瓜青枯病生物防治的优良菌株。     

丹参植株内生菌的分离纯化及其抗病性研究

为探明丹参(Salvia miltiorrhiza Bge)内生菌的种类,筛选拮抗农作物病害菌的生防菌株,从健康丹参植株中进行内生菌分离,依照形态特征以及16SrDNA序列对菌株进行初步分类鉴定,采用琼脂块法进行拮抗菌株筛选,并选取拮抗活性较强的菌株液体发酵进行体外抑菌试验。结果表明:(1)从丹参植株中共分离得到69株内生菌(真菌62株、放线菌7株),其中23株内生真菌属于无孢类群或现有条件不适合产孢,其余真菌菌株中串珠镰孢菌属(Fusarium moniliforme Sheld.)和交链孢菌属(Alternaria sp)为优势菌群;7株内生放线菌均为链霉菌属。(2)病原菌拮抗性实验表明,有44株内生菌对病原菌具有不同程度的拮抗活性,其中12株内生菌对2种及以上靶标病原菌具有拮抗活性,表明丹参内生菌具有一定的广谱抗菌性。(3)放线菌菌株A232的次级代谢产物对白色假丝酵母(Canidia albicans)和苹果腐烂菌(Valsa mali)都表现出较强的拮抗活性,通过形态、培养特征以及16SrDNA序列分析,鉴定其为Streptomyces luteoverticillatus。     

稻瘟病菌拮抗性大豆根瘤内生细菌的筛选及抑制效果

【目的】从河南大豆根瘤的内生细菌资源中筛选对稻瘟病菌有拮抗作用的菌株,初步探讨其抑菌效果,为进一步研究其抑菌机理提供菌种资源。【方法】以稻瘟病菌为供试病原菌,采用对峙法进行拮抗性菌株筛选,显微观察法研究受抑制病原菌菌丝变化,对筛选拮抗性菌株进行细胞形态学及生理生化特性试验、16S rRNA基因测序和系统发育分析及接种防效试验。【结果】经复筛有17株内生菌拮抗效果较明显,最高抑制率为62.16%;受抑制病原菌丝呈现弯曲打结、断裂、原生质浓缩等畸形状态。拮抗性筛选过程中内生菌快速生长形成生物薄膜,包埋菌丝并使其断裂。拮抗菌株分布在7属9种,稻瘟病拮抗性大豆根瘤内生菌呈现种属多样性。防效试验表明内生菌处理组稻苗发病率和病情指数均显著降低,防治效果最高达74.19%。【结论】大豆根瘤内生拮抗性菌株具有种属多样性,拮抗性菌株处理组稻苗发病率和病情指数均显著降低,防治效果显著,为进一步研究其抑菌机理提供菌种资源。     

土壤拮抗放线菌的分离筛选及其抑菌物质特性的研究

目的从土壤中筛选拮抗能力强且抑菌特性稳定的放线菌菌株。方法采用双层琼脂法筛选出4株拮抗放线菌菌株,然后采用杯碟法测这4株菌株发酵液提取物的抗菌谱、最小抑菌浓度、热稳定性和酸碱稳定性。结果 4株菌株发酵液提取物都能抑制金黄色葡萄球菌、大肠埃希菌、铜绿假单胞菌和白色念珠菌的生长。以金黄色葡萄球菌为指示菌测发酵液提取物的最小抑制浓度,6#和9#拮抗作用较强,发酵液提取物稀释0.125mg/ml仍有抑菌作用。6#菌株在100℃处理30min后仍有40%的抑菌活性。6#菌株发酵液提取物在碱性环境条件下比在酸性环境条件下稳定。结论 4株菌株中6#菌株发酵液提取物具有拮抗能力强、最小抑菌浓度低和在碱性条件下活性较稳定的特点。     

Identification and analysis of differentially expressed cDNAs during nonself-competitive interaction between Phlebiopsis gigantea and Heterobasidion parviporum

The molecular factors regulating interspecific interaction between the saprotrophic biocontrol fungus Phlebiopsis gigantea and the conifer pathogen Heterobasidion parviporum were investigated. We constructed cDNA libraries and used expressed sequence tag analysis for the identification and characterization of genes expressed during the self and nonself-hyphal interaction. cDNA clones from either the pathogen or biocontrol agent were arrayed on nylon membrane filters and differentially screened with cDNA probes made from mycelia forming the barrage zone during nonself-interactions, mycelia growing outside the barrage zones or monocultures. BlastX analysis of the differentially expressed clones led to the identification of genes with diverse functions, including those with potential as virulence factors, such as hydrophobins. Because of the high sequence conservation (r2 = 0.81) between P. gigantea and H. parviporum, a selected number of genes from either fungus were used to monitor the expression profile under varying interaction conditions by virtual northern blot. The results are discussed with respect to the potential role of the induced genes during the nonself-competitive interaction for space and nutrients between P. gigantea and H. parviporum.     

Use of a breeding approach for improving biocontrol efficacy of Phlebiopsis gigantea strains against Heterobasidion infection of Norway spruce stumps

Sixty-four wild heterokaryotic isolates of Phlebiopsis gigantea were analysed for asexual spore production, growth rate and competitive ability against Heterobasidion in vitro , as well as growth rate in Norway spruce wood. These P. gigantea traits were considered important for controlling infection of Norway spruce stumps by spores of Heterobasidion spp. Ten most promising P. gigantea isolates were crossed with each other and 172 F₁ progeny heterokaryons were analysed for the above-mentioned traits. Thirteen most promising progeny heterokaryons were selected and their biocontrol ability against infection by Heterobasidion was compared with the parental isolates in stem pieces of Norway spruce. The results indicated that the progeny strains had generally better traits and control efficacy than the parental strains. The genetic effects accounted for a part of the variations between progeny and parental strains. This further suggests that there is a potential to improve the biocontrol properties of P. gigantea through breeding.     

Ecophysiological differences between saprotrophic and clinical strains of the microscopic fungus Aspergillus sydowii (Bainier & Sartory) Thom & Church

A number of ecophysiological differences were shown for saprotrophic and clinical strains of the potentially pathogenic microscopic fungus Aspergillus sydowii. The colony growth rates were determined for four saprotrophic and five clinical fungus strains on Czapek medium within the ranges of temperature (5, 10, 15, 20, 30, 35, 37, 40, 42°C) and humidity (0.8, 0.85, 0.9, 0.95, 099 a_w), as well as on media with other sources of organic matter (Sabouraud medium, Hutchinson medium with cellulose, and water agar). The capacity for growth of A. sydowii strains on a broad spectrum of organic substrates was determined with the EKOLOG method for multisubstrate testing. The clinical and saprotrophic strains of A. sydowii differed in the colony growth rates under the same temperature and humidity combinations, as well as in the capacity for growth on different organic substrates. At decreased water activity (0.90–0.85 a_w), the temperature interval for growth of the saprotrophic strains was narrower (30 ± 2°C) than for the clinical strains (25–30°C). Comparison of growth on different media revealed the highest growth rates of the clinical strains on Sabouraud protein-containing medium. The method of multisubstrate testing showed that the saprotrophic strains grew on sugars better than the clinical ones.     

单孢融合性实验法鉴定采自四川北部的小孔异担子菌(英文)

在四川北部九寨沟和黄龙保护区的云杉、松树和铁杉上发现异担子菌 ,并从 6号标本中分离到 73个单孢菌株。在每个标本中随机选取 2个菌株分别与欧洲的原始多年异担子菌、小孔异担子菌和冷杉异担子菌的单孢菌株进行融合性交配。试验表明 ,这 6号标本都是小孔异担子菌。四川的菌株与欧洲的原始多年异担子菌交配不融合 ,而与欧洲的小孔异担子菌完全融合 ,并在交配后的菌落中形成锁状联合 ,且在交配的菌落中不产生拮抗线。虽然四川的菌株与欧洲的冷杉异担子菌有较高的融合性 ,但这些交配大部分为单项交配 ,即只在四川一侧的菌落中产生锁状联合 ,而且在交配的菌落中多数产生拮抗线。研究样品全部采自天然林 ,小孔异担子菌在四川经营林分中的致病性还有待进一步调查。     

Iron and reactive oxygen responses in Pinus sylvestris root cortical cells infected with different species of Heterobasidion annosum sensu lato

Defence mechanisms in trees are not well understood. We assessed whether distribution of iron ions and their co-localisation with reactive oxygen species in Pinus sylvestris root cells reflect differential preferences of the pathogens Heterobasidion annosum sensu stricto, H. parviporum and H. abietinum to the host. Strains of H. annosum s.s. characterised by a greater preference for P. sylvestris induced accumulation of superoxide (O(2) (-)) in host cells 6?h after inoculation, whereas two peaks in accumulation of O(2) (-) (after 4 and 48?h) were observed after infection with strains of the pathogens H. parviporum and H. abietinum, which have a lower preference for P. sylvestris. Moreover, strains of H. annosum s.s. caused increased production of hydrogen peroxide (H(2)O(2)) in P. sylvestris cells, in contrast with strains of the other two species (H. parviporum and H. abietinum). Following inoculation with H. annosum s.s. strains, H(2)O(2) was correlated negatively with O(2) (-) and correlated positively with ferrous iron (Fe(2+)). Co-localisation of Fe(3+) with H(2)O(2) may suggest that they are involved in inducing hypersensitive responses and eventually cell death in roots inoculated with H. annosum s.s. strains, in contrast with H. parviporum, in which other mechanisms operate when the host is parasitised.     

Spruce wood degradation by Pleurotus abieticola in comparison with Phlebiopsis gigantea and Heterobasidion parviporum: in vitro experiments with isolates

The objective of this study was to evaluate the in vitro mycelium growth of Pleurotus abieticola and its competitive ability to decompose sapwood and heartwood wood, as compared to the activity of Phlebiopsis gigantea and Heterobasidion parviporum. Over the last several decades, P. gigantea has routinely been used for biocontrol of the conifer pathogen Heterobasidion annosum s.l.; however, its protective effect on Norway spruce stands was recently demonstrated to be not satisfactory. P. abieticola was proposed instead, as a promising species that might successfully compete with H. parviporum. We investigated the growth of mycelium and the ability of P. abieticola isolates to decompose wood of Norway spruce, in the experiment with isolates of P. gigantea and H. parviporum. Heartwood was better decomposed than sapwood by the majority isolates used in the experiment. Linear growth of the investigated fungi showed a more rapid mycelium development for P. gigantea and H. parviporum, compared to that of P. abieticola. In dual cultures, H. parviporum was overgrown only by P. gigantea. All the tested isolates of P. abieticola showed weaker wood decomposition than those of P. gigantea and H. parviporum. Further study is required to better understand the role of P. abieticola for the protection of spruce stands.     

Diverse phenotypes resulting from polyphosphate kinase gene (ppk1) inactivation in different strains of Helicobacter pylori

Connections among biochemical pathways should help buffer organisms against environmental stress and affect the pace and trajectory of genome evolution. To explore these ideas, we studied consequences of inactivating the gene for polyphosphate kinase 1 (ppk1) in strains of Helicobacter pylori, a genetically diverse gastric pathogen. The PPK1 enzyme catalyzes synthesis of inorganic polyphosphate (poly P), a reservoir of high-energy phosphate bonds with multiple roles. Prior analyses in less-fastidious microbes had implicated poly P in stress resistance, motility, and virulence. In our studies, ppk1 inactivation caused the expected near-complete absence of poly P (>250-fold decrease) but had phenotypic effects that differed markedly among unrelated strains: (i) poor initial growth on standard brain heart infusion agar (five of six strains tested); (ii) weakened colonization of mice (4 of 5 strains); (iii) reduced growth on Ham's F-12 agar, a nutritionally limiting medium (8 of 11 strains); (iv) heightened susceptibility to metronidazole (6 of 17 strains); and (v) decreased motility in soft agar (1 of 13 strains). Complementation tests confirmed that the lack of growth of one Deltappk1 strain on F-12 agar and the inability to colonize mice of another were each due to ppk1 inactivation. Thus, the importance of ppk1 to H. pylori differed among strains and the phenotypes monitored. We suggest that quantitative interactions, as seen here, are common among genes that affect metabolic pathways and that H. pylori's high genetic diversity makes it well suited for studies of such interactions, their underlying mechanisms, and their evolutionary consequences.     

Influence of the culture medium on antibiotic susceptibility testing of food-associated lactic acid bacteria with the agar overlay disc diffusion method

AIMS: To investigate the influence of the culture medium on antibiotic susceptibility testing of food-associated lactic acid bacteria (LAB) with the agar overlay disc diffusion (DD) method. METHOD: The antibiotic resistance profile of 39 food-associated lactobacilli and enterococci was determined with the agar overlay DD method using a defined medium (i.e. Iso-sensitest agar; ISA) or an undefined medium (i.e. de Man, Rogosa, Sharpe or MRS agar). RESULTS: The study revealed that ampicillin discs and, although to a lesser extent, also tetracycline discs consistently produced larger zones on MRS medium compared to ISA medium. For the antibiotics gentamicin, bacitracin and erythromycin, the radius of the inhibition zones produced on MRS medium was significantly smaller in relation to ISA. For categorizing LAB isolates into resistant, intermediate and susceptible groups, it was demonstrated that major errors can occur in determining bacitracin and gentamicin resistance if MRS medium instead of ISA medium is used. On the other hand, the performance of both media was found to be equivalent for testing tetracycline resistance. CONCLUSIONS, SIGNIFICANCE AND IMPACT OF THE STUDY: Despite the fact that MRS medium generally supports the growth of lactic acid bacteria much better than the nutrient-poor ISA medium, the present study clearly demonstrates that both media are not compatible in susceptibility testing against various classes of antibiotics. These results may stimulate future discussions on a generally recommended DD method for susceptibility testing of food LAB strains.     

Spread of Heterobasidion annosum s.s. and Heterobasidion parviporum in Picea abies 15 years after stump inoculation

The tree pathogenic fungi Heterobasidion annosum s.s. and Heterobasidion parviporum cause root and butt rot in Norway spruce (Picea abies) and produce serious economic losses to the forest sector in Europe. We experimentally studied inter- and intraspecific differences between H. parviporum and H. annosum s.s. in the way they infect stumps and spread into neighbouring trees. Eleven H. parviporum and nine H. annosum s.s. isolates were artificially inoculated on stumps of two spruce stands after first thinning. After 15 years, the same isolates were reisolated from neighbouring trees. Heterobasidion parviporum spread more frequently from the inoculated stumps to the neighbouring trees than H. annosum s.s. The surroundings of H. annosum s.s. stumps that did not spread were often colonized by H. parviporum. Heterobasidion annosum s.s. spread was restricted mainly to the areas of the plot where no other Heterobasidion genotypes had been inoculated. In such cases, H. annosum s.s. tended to develop into bigger genets than H. parviporum. The probability of stump-to-tree spread of H. parviporum depended on the diameter of the stumps, suggesting that H. parviporum spread may relate to the presence of heartwood. Both H. parviporum and H. annosum s.s. proved to be strong pathogens on Norway spruce; however, when competing for the same trees, H. parviporum seemed capable of excluding H. annosum s.s. from the stand.