Two new species of fishes from families Muraenidae (Anguilliformes) and Mugiloididae (Perciformes) from the Waters of Vietnam

New species of the genera Gymnothorax (fam. Muraenidae) and Parapercis (fam. Mugiloididae) are described from coastal waters of central Vietnam. G. emmae sp. n. is a common species all along the coast from the Van Phong Bay to the Phan Thiet Bay and differs from other species of this genus in characters of coloration, dentition, and the vertebral formula. P. bicoloripes sp. n. is common in the Phan Thiet Bay and is also know from one specimen from the Nha Trang Bay; from other species of the genus, it differs in coloration and meristic characters.     

Features of reproductive biology in two tropical fish species from the family Scorpaenidae

Composition of the urogenital system, oocyte development, gamete morphology, and features of embryonic development are described in Scorpaenopsis possi and Sebastapistes cyanostigma (Scorpaenidae) from the Nha Trang Bay, the South China Sea (Vietnam). In males of both species, paired spermiducts enter into the anterior dorsal part of the hypertrophied urinary bladder containing mature sperm. The duration of progressive movements of spermatozoa obtained from the testes and urinary bladder is 5–6 and 12–15 min after activation, respectively. Ovulated oocytes possess oval shapes, they are transparent and without oil droplets. The oocytes are embedded into the floating gelatinous matrix. Insemination of the eggs in nature is apparently external. The embryos of S. cyanostigma hatch at a more advanced morphological condition in comparison to the embryos of Sc. possi. The features of reproductive biology are discussed in the context of the evolution of viviparity within the family.     

Gobies (Gobioidei) of soft bottoms from Nha Trang and Van Phong bays (South China Sea,Vietnam)

Gobioid fishes collected in Nha Trang and Van Phong bays (Vietnam) represented by 44 species, including 30 species continuously associated with soft bottoms in the open parts of the bays with normal marine conditions are reviewed. A new species, Navigobius khanhoa sp. n., is described. This species differs from other species of the genus in much higher number of rays in the second dorsal fin (26), smaller size of the mouth, teeth on the jaws arranged in a single row, and other characters. Four species from the genera Acentrogobius, Eviota, Favonigobius, and Gnatholepis have not been identified to the species, and, most likely, some of them are new for science. Nine species are recorded in the fauna of Vietnam for the first time: Aulopareia unicolor, Bathygobius hongkongensis, Egglestonichthys bombylios, Glossogobius circumspectus, Oplopomops diacanthus, Oxyurichthys auchenolepis, Tomiyamichthys ex gr. russus, Tryssogobius porosus, and Valenciennea immaculata. An occurrence of Glossogobius olivaceus in the fauna of Vietnam is confirmed. Three species, G. olivaceus, Oligolepis acutipennis, and Periophthalmus kalolo, are recorded in the Cai River delta for the first time. A new synonymy is established: Eviota gurjanovae (Prokofiev, 2007) = E. prasina (Klunzinger, 1871). The current state of knowledge of Gobiidae fauna of Vietnam is discussed, and the updating of the species composition of Gobiodontini of Nha Trang Bay is presented in addition to the species list published earlier (Prokofiev, 2007).     

Characterisation of 12 microsatellite loci in the Vietnamese commercial clam <Emphasis Type="Italic">Lutraria rhynchaena</Emphasis> Jonas 1844 (Heterodonta: Bivalvia: Mactridae) through next-generation sequencing

The marine clam Lutraria rhynchaena is gaining popularity as an aquaculture species in Asia. Lutraria populations are present in the wild throughout Vietnam and several stocks have been established and translocated for breeding and aquaculture grow-out purposes. In this study, we demonstrate the feasibility of utilising Illumina next-generation sequencing technology to streamline the identification and genotyping of microsatellite loci from this clam species. Based on an initial partial genome scan, 48 microsatellite markers with similar melting temperatures were identified and characterised. The 12 most suitable polymorphic loci were then genotyped using 51 individuals from a population in Quang Ninh Province, North Vietnam. Genetic variation was low (mean number of alleles per locus = 2.6; mean expected heterozygosity = 0.41). Two loci showed significant deviation from Hardy–Weinberg equilibrium (HWE) and the presence of null alleles, but there was no evidence of linkage disequilibrium among loci. Three additional populations were screened (n = 7–36) to test the geographic utility of the 12 loci, which revealed 100 % successful genotyping in two populations from central Vietnam (Nha Trang). However, a second population from north Vietnam (Co To) could not be successfully genotyped and morphological evidence and mitochondrial variation suggests that this population represents a cryptic species of Lutraria. Comparisons of the Qang Ninh and Nha Trang populations, excluding the 2 loci out of HWE, revealed statistically significant allelic variation at 4 loci. We reported the first microsatellite loci set for the marine clam Lutraria rhynchaena and demonstrated its potential in differentiating clam populations. Additionally, a cryptic species population of Lutraria rhynchaena was identified during initial loci development, underscoring the overlooked diversity of marine clam species in Vietnam and the need to genetically characterise population representatives prior to microsatellite development. The rapid identification and validation of microsatellite loci using next-generation sequencing technology warrant its integration into future microsatellite loci development for key aquaculture species in Vietnam and more generally, aquaculture countries in the South East Asia region.     

Taxonomic composition of bacteria associated with cultivated mollusks <Emphasis Type="Italic">Crassostrea lugubris</Emphasis> and <Emphasis Type="Italic">Perna viridis</Emphasis> and with the water of the Gulf of Nha Trang lagoon,Vietnam

One hundred and four strains of heterotrophic bacteria have been isolated and characterized from two species of bivalve mollusks cultivated in the Gulf of Nha Trang (Vietnam) and from the water of a mariculture farm. The isolates have been identified on the basis of morphological, physiological, biochemical, and chemotaxonomic properties, as well as by the content of G+C bases in DNA. In the microflora of mollusks, Vibrio alginolyticus was predominant; the pathogenic species V. harveyi and V. splendidus were found as well. Staphylococci and bacilli occupied the second place in abundance after vibrios. In addition, coryneforms and enterobacteria, as well as Pseudomonas spp. and Pseudoalteromonas spp., were revealed. The composition of the water microflora was more diverse as compared with the microflora of mollusks. In the water, Bacillus spp., Vibrio spp., and Pseudomonas spp. were predominant. Brevibacterium spp. and other coryneform bacteria, as well as enterobacteria, occurred in significant amounts. In addition, Pseudoalteromonas spp., Marinococcus sp., Halobacillus sp., Shewanella sp., Sulfitobacter sp., and bacteria of the CFB cluster were noticed. The presence of pathogenic and conditionally pathogenic bacterial species in the water and mollusks is probably the reason for the high death rate of cultivated animals at the mariculture farm.     

Features of the reproductive cycle in females of the beaked redfish <Emphasis Type="Italic">Sebastes mentella</Emphasis> (Sebastidae)

The reproductive status of some categories of females of the beaked redfish Sebastes mentella has been determined as a result of the histological analysis. The histological characteristic of gonads of large nonreproductive females of redfish is presented for the first time. Gonads of mature females that skip spawning are studied. The cytomorphological characteristic of ovaries after larvae extrusion is specified. A broadened maturity scale for gonads of females of S. mentella supplemented with stages that characterize fish that skip spawning and large nonreproductive females is proposed.     

Characterization of Communities of Heterotrophic Bacteria Associated with Healthy and Diseased Corals in Nha Trang Bay (Vietnam)

A comparative investigation of the heterotrophic microflora of 11 species of healthy corals and of white-band-diseased and yellow-band-diseased corals inhabiting the reefs of Nha Trang Bay (Vietnam), which has been exposed to anthropogenic impact, was performed. Fifty-nine strains of heterotrophic bacteria isolated on Y/K and Endo media were investigated and characterized. All the isolates were identified at the genus level by consideration of the results of analysis of their phenotypic properties, determination of the molar percent of G+C bases in their DNA, and the composition of the fatty acids of lipids. In the composition of the microflora of tissues of healthy corals, γ-proteobacteria prevailed, with halomonads being dominant among them. In addition, the gram-negative bacteria included Pseudomonas and Vibrio spp., members of the Cyto-phaga-Fla-vobacterium-Bacteroides (CFB) phylogenetic cluster, and Moraxella sp. The gram-positive bacteria revealed included Bacillus, Staphylococcus, Halococcus, and Micrococcus spp., and coryneform bacteria. In the composition of the microflora of the tissues of affected corals, bacteria of the family Enterobacteriaceae and of the genera Planococcus and Arthrobacter, which were not revealed in healthy hydrobionts, were found. The anthropogenic impact is not the sole factor determining the infection of corals.     

Morphofunctional characterization of the reproductive system of the gastropods <Emphasis Type="Italic">Littorina brevicula,L. mandshurica</Emphasis>, and <Emphasis Type="Italic">Nucella heyseana</Emphasis> from uncontaminated and contaminated areas of Peter the Great Bay,Sea of Japan

The structure and state of the reproductive system were studied in the periwinkles Littorina brevicula and L. mandshurica from the coastal area of Vladivostok and in the dogwhelk Nucella heyseana from the protected area of Vostok Bay and from contaminated sites in Amursky Bay. These species were investigated for the presence of imposex and intersex (pathological changes caused by endocrine disruption under the influence of toxic substances). The pathological changes revealed in the gonads of Littorina were oocyte resorption and lipofuscin accumulation; an intersex condition was not found. Imposex specimens (with penis formation) were found among Nucella females from Amursky Bay. The relative penis length in females was 25% of the penis length in males. This kind of pathology was not found in Nucella from clean waters of Vostok Bay.     

Dragonets (Callionymidae) of soft bottoms from the coastal zone of southern Central Vietnam

A review of dragonets (Gallionymidae) from the coastal waters of Khanh Hoa (Nha Trang and Van Phong bays) and Binh Thuan (Phu Quy Island) provinces, Vietnam, was conducted based on the samples of the author. In total, nine species were recorded, including three species indicated in the fauna of the country for the first time. In addition, geographic and bathymetric distribution of C. altipinnis, as well as morphological variation of several other species, was specified.     

Life history traits of two dwarf cichlids species in the white waters of the Amazonian floodplain

The reproductive parameters are among the most important life history aspects of fishes influenced by environmental variation. During recent years, the main life history strategies of Amazonian fish species were defined mostly by a set of reproductive parameters. In the present work, we sought to describe important life history parameters, in particular on reproductive characteristics of Apistogramma agassizii and Apistogramma bitaeniata, found in floodplain lakes of the Brazilian Amazonia. The species presented a positive sexual dimorphism, and males were significantly bigger than females. For both sexes, four developmental phase of gonad maturation were detected, and based on those it was possible to identify mature, reproductive specimens throughout the entire period of the study. From the ovaries of mature females, fecundity and spawning type were determined. Low fecundity, short spawning periods, possibly separated only by few months, and total spawning are all good indications that A. agassizii and A. bitaeniata evolved an opportunistic strategy in their life history.     

Participatory fishery monitoring is successful for understanding the reproductive biology needed for local fisheries management

Tropical fisheries management should rely on reproductive biology to inform management regulations; however, this information is often lacking and can be highly variable over in space and time. It is unfeasible for many fisheries, especially data-poor ones that are typical of tropical reefs to collect the necessary information on reproductive biology. One solution is a participatory approach where local fishers, scientists, and regulating agencies gather the necessary information to assess population variability for important management metrics such as size at maturity, reproductive output, and spawning seasons. Through collaborations with local fishers, we developed a monitoring program to gather population-level information on the reproductive characteristics of the convict tang, Acanthurus triostegus sandvicensis. We examined four locations across the main Hawaiian Islands and found size at maturity [size at which 50% of individuals are mature (L₅₀)] to vary among locations, with interpopulation differences in maturity?~?20% of the fish’s total length. Larger individuals produced more eggs and spawned more often than smaller individuals. A semilunar spawning pattern was observed, with group spawning occurring near the new and full moons. However this pattern was variable by year and location, likely resulting from different seasonal peaks in spawning by location. Gonadosomatic index (t?=?2.41, p-value?=?0.02) and spawning fraction (z?=?2.92, p-value?<?0.01) were both significantly higher in 2014 compared to 2013, suggesting annual variability in reproductive output. Participatory fishery monitoring proved successful in collecting biological needed for management and improved understanding of population reproductive variability.     

Diversity and community patterns of testate amoebae in Bau Sen and Bau Trang lakes in Binh Thuan Province,Vietnam

The species composition and distribution of testate amoebae in Bau Sen and Bau Trang lakes (Binh Thuan Province, Vietnam) were investigated. Fifty-three species, varieties and forms have been identified from the water column and sediments. Twenty-seven species, varieties and forms from the genera Arcella, Centropyxis, Cyclopyxis, Difflugia and Pyxidicula were found in Vietnam for the first time. The updated list of testate amoebae in Vietnam now includes 286 taxa. The genera Arcella, Centropyxis and Difflugia are characterized by the highest frequency of occurrence. The species diversity of Arcella, Centropyxis, Difflugia was the highest. Centropyxis aculeata, Arcella discoides, Difflugia schurmanni, Netzelia oviformis and Difflugia limnetica were the most common species. Many species have shown restricted distribution, some species have been found only in one lake and not been found in another lake. The number of observed species, varieties, and forms in each lake is 34. The average number of the species per sample on the shores of the lakes subjected to human agricultural activity was significantly higher than in the samples from the shores of the lakes with less anthropogenic disturbance. The curves of “cumulative species number vs. sampling effort” are well fitted by equations S = 7.60 N ^0.69 for Bau Sen lake and S = 12.52 N ^0.46 for Bau Trang. The curves are unsaturated, which indicates that more intensive investigations of testate amoebae should be expected to reveal more species.     

Fecundity of the tropical catadromous eels <Emphasis Type="Italic">Anguilla bicolor bicolor</Emphasis>, <Emphasis Type="Italic">A. bengalensis bengalensis</Emphasis> and <Emphasis Type="Italic">A. marmorata</Emphasis>

Maturation is one of the most important ontogenetic transitions in an individual’s life. However, the reproductive ecology of the tropical anguillid eel genus Anguilla at the onset of oceanic spawning migration is poorly understood. To understand the reproductive ecology, the fecundity of the tropical eels Anguilla bicolor bicolor, A. bengalensis bengalensis and A. marmorata was examined using advanced migrating silver eels (Stage IV and V). A close linear relationship was found between total length and fecundity in A. bengalensis bengalensis. The fecundities of A. bicolor bicolor (0.55 to 4.96 × 10⁶), A. bengalensis bengalensis (0.33–1.72 × 10⁶) and A. marmorata (0.99 × 10⁶) were within the range of those observed in temperate eels.     

Occurrence of two types of larvae of the Asian seaperch (<Emphasis Type="Italic">Lateolabrax</Emphasis>) in the estuaries of northern Vietnam

Lateolabrax sp. larvae were collected in the Tien Yen and Kalong estuaries of northern Vietnam, the southernmost locality for this genus distribution. Vietnamese Lateolabrax sp. larvae could be distinguished from those of L. japonicus by pigmentation patterns. Their morphological, meristic and pigmentation characters were closer to those of Chinese Lateolabrax than L. japonicus, so Vietnamese Lateolabrax is likely situated as a population of the Chinese one. Morphometric and pigmentation characters of larvae from the two estuaries differed, suggesting that Lateolabrax of northern Vietnam are diversified and consist of at least two different breeding stocks.     

Age-based demography and reproductive biology of three <Emphasis Type="Italic">Epinephelus</Emphasis> groupers, <Emphasis Type="Italic">E. polyphekadion,E. tauvina,</Emphasis> and <Emphasis Type="Italic">E. howlandi</Emphasis> (Serranidae), inhabiting coral reefs in Okinawa

The demography and reproductive biology of three Epinephelus groupers (Serranidae), namely E. polyphekadion, E. tauvina, and E. howlandi in the Yaeyama Islands, Okinawa, were examined based on age assessment using otoliths and gonadal histology. The maximum ages for these three species were 26 year, 23 year, and 17 year. The von Bertalanffy growth functions were also determined for each species. The size and age at 50% female maturity were estimated to be 358 mm in total length (TL) and 6.0 year for E. polyphekadion, 371 mm TL and 6.7 year for E. tauvina, and 327 mm TL and 4.1 year for E. howlandi, respectively. Significant differences between the sexes in size and age frequencies were found in all three species, with males being larger and older than females, or transitional individuals. These results strongly indicated that the population of these three grouper species showed monandric protogynous hermaphroditism. The sex ratios of E. polyphekadion and E. tauvina were biased in favor of females, but that of E. howlandi was equivalent between sexes. The relative sizes of ripe testes indicated that the intensity of sperm competition varied among species suggesting different mating system of each species. Reproductive seasonality was similar among species, with active vitellogenesis coinciding with the annual rise in water temperature. The active spawning period was determined to be between April and May for E polyphekadion, in May for E. howlandi, and from March to June for E. tauvina.     

Three new species within the genus <Emphasis Type="Italic">Entoloma</Emphasis> (Basidiomycota,Agaricales) with clamped basidia and a <Emphasis Type="Italic">serrulatum</Emphasis>-type lamellae edge,and their phylogenetic position

Three new species of the gеnus Entoloma s.l. are described on the basis of morphological and molecular evidence. Two of them are morphologically and phylogenetically closely related to the European species E. violaceozonatum but differ sufficiently by their geographic distribution: E. bulakhae is from the Russian Far East and E. bidupense from Vietnam. The more distant E. atricolor from Vietnam is remarkable because of the brownish-black color of the basidiomata, blackish lamellae edge near the stem, and observed dimorphism in cheilocystidia. These three species are characterized by the combination of clamped basidia and a serrulatum-type lamellae edge and grouped together within the /Inocephalus–Cyanula clade in sister position to /Inocephalus and /Griseorubida. It is argued that they may possibly constitute a separate section in future, when more data will be available. For this reason, section Violaceozonata is proposed here “ad interim” to acknowledge the current isolated position.     

The effect of bloom of filamentous green algae on the reproduction of yellowfin sculpin <Emphasis Type="Italic">Cottocomephorus grewingkii</Emphasis> (Dybowski, 1874) (Cottoidae) during ecological crisis in Lake Baikal

In shallow water areas of open Lake Baikal, filamentous green alga of the genus Spirogyra grows abundantly. Together with alga of the genus Ulothrix, it forms algal mats. According to our observations from 2010 to 2013, the spawning habitat conditions for the yellowfin sculpin Cottocomephorus grewingkii (Dybowski, 1874) (Cottidae) proved to be significantly disturbed in the littoral zone of Listvennichnyi Bay (southern Baikal), which, in turn, reduced the number of egg layings. With a 100% projective cover of the floor and a high density of green filamentous algae, the shallow-water stony substrate becomes completely inaccessible for spawning of the August population.