Are baseline and short-term corticosterone stress responses in free-living amphibians repeatable?

Amphibians respond to environmental stressors by secreting corticosterone, a stress hormone which promotes physiological and behavioral responses. Capture handling can be used to stimulate physiological stress response in amphibians. The use of single blood sampling and presentation of mean data often limits the quantification of within and between individual variation in baseline and short-term corticosterone stress responses in amphibians. It is important for studies of amphibian physiological ecology to determine whether baseline and short-term corticosterone stress responses are consistent or not. We quantified repeatability (r), a statistical measure of consistency, in baseline and short-term corticosterone stress responses to a standard capture and handling stress protocol in free-living adult male cane toads (Rhinella marina). Corticosterone metabolite concentrations were measured entirely non-invasively in male toad urine samples via an enzyme-immunoassay. During the first sampling occasion, urine samples were collected manually from individual male toads (n = 20) immediately upon field capture. Toads were handled for 5 min then transferred to plastic bags (constituting a mild stressor), and urine samples were collected hourly over 8 h in the field. The toads were resampled for baseline (0 h) urine corticosterone with hourly urine sampling over 8 h (for quantification of the stress induced corticosterone) at 14 day intervals on three consecutive occasions. Within and between sample variations in urinary corticosterone metabolite concentrations were also quantified. All toads expressed a corticosterone stress response over 8 h to our standard capture and handling stress protocol. Variations both within and between toads was higher for corrected integrated corticosterone concentrations than corticosterone concentrations at baseline, 3 or 6 h. Baseline urinary corticosterone metabolite concentration of the male toads was highly repeatable (r = 0.877) together with high statistical repeatabilities for 3 h (r = 0.695), 6 h (r = 0.428) and 8 h (r = 0.775) corticosterone metabolite concentrations, and for the total and corrected integrated corticosterone responses (r = 0.807; r = 0.743 respectively). This study highlights that baseline and short-term corticosterone stress responses are repeatable in free-living amphibians. Future studies should utilize this non-invasive tool to explore repeatability among seasons and across years, and determine its functional significance in relation to behavioral ecology and reproduction in amphibians generally.     

The results of an assessment of the ecological state of zoobenthos communities according to the difference of evenness index (D E′ )

The difference of the evenness index (D _E′ ) is offered for an assessment of the ecological state of zoobenthos communities. The index is deduced on the basis of the Shannon indexes calculated according to abundance and biomass data and differentiates between these informational estimations (Shannon diversity) of evenness of species in any given community. Conclusions made by Pianka about the predomination of organisms with r and K life strategy in communities impacted and unimpacted by ecological stress, as well as the ABC-curves method suggested by Warwick, were used as the basis of the functioning mechanism for the suggested index. The examples of index applicability are demonstrated by an assessment of materials collected in freshwater, estuarine, and marine waterbodies during one-time surveys and long-term monitoring observations. The results are compared with zoobenthos assessments made on the basis of some other indexes. Conclusions concerning the efficiency of the D _E′ have been made and some of its advantages over other indexes are shown.     

Does the response of the intestinal epithelium to keratinocyte growth factor vary according to the method of administration?

BACKGROUND: Keratinocyte growth factor (KGF) is a potent mitogen and may be of value for the treatment of conditions such as short bowel syndrome and chemotherapy-induced mucositis. However the most efficacious route and method of administration is unclear. METHODS: Rats maintained by total parenteral nutrition (TPN) were given KGF (1 mg/kg/rat/day, i.v.) infused continuously or as a once-daily injection. The same dose was also given s.c. to chow-fed rats. Changes in gut growth were assessed by measurement of wet weight, proliferation (vincristine induced metaphase arrest) and crypt branching index. Changes in gut hormone profile were also determined to examine if any trophic effects were mediated via this mechanism. RESULTS: KGF caused a 70-100% increase in wet weight of the stomach, small and large intestine of TPN-fed rats (P < 0.01) with no significant differences seen between the two methods of administration. The increase in metaphase counts was greatest in the stomach (about seven-fold P < 0.01), but was less pronounced in the distal small intestine and colon (about 50% increase). The trophic effect of KGF was much less prominent in orally-fed rats. Crypt branching index was significantly reduced by KGF in the proximal small intestine of TPN, but not orally-fed rats. Plasma gastrin, PYY, total glucagon, enteroglucagon and GLP-1 all increased by two-three-fold (all P < 0.01) in response to KGF whereas insulin levels fell by about 25% in the TPN group. CONCLUSIONS: The mitogenic action of KGF occurred predominantly in the stomach and proximal small intestine. Its efficacy was less pronounced in orally-fed animals, suggesting KGF may be of greatest benefit in conditions associated with lowered intestinal proliferation. Clinical trials of KGF can probably use single daily i.v. injections without reduction in efficacy.     

Distribution of beluga whales (Delphinapterus leucas) in the Russian Arctic seas according to the results of expedition aboard RV Mikhail Somov, September–November 2010

Data on the distribution of marine mammals, including beluga whales (Delphinapterus leucas Pallas, 1766), in the Arctic are scarce because of various causes and conditions, including the vast expanses of the region, its poor accessibility, severe climate, long polar night, and high cost of research. Nevertheless, the results of aerial observations during ice reconnaissance and onboard observations during sea voyages (Kleinenberg et al., 1964; Geptner et al., 1976; Belikov, Boltunov, and Gorbunov, 2002; Belikov and Boltunov, 2002; Ezhov, 2005; Matishov and Ognetov, 2006; Biologiya i okeanografiya??, 2007; Lukin and Ognetov, 2009) have provided a general idea of the distribution pattern of beluga whales in the Russian Arctic seas. More detailed data concern the distribution of these whales in the White Sea, where aerial surveys of the water area were performed previously and have been resumed in recent years (Nazarenko et al., 2008; Glazov et al., 2010, 2011). The relevant data on the Barents, Kara, Laptev, and East Siberian seas are much poorer. In the summer (ice-free) period, beluga whales concentrate in coastal waters. They have been recorded most frequently off Franz Josef Land, Novaya Zemlya, Vaygach Island, and in Czech Bay in the Barents Sea; in Baydaratskaya Bay, Gulf of Ob, and Yenisei Gulf in the Kara Sea; off the northeastern coast of Taimyr and in estuaries of the Anabar, Olenyok, and Lena rivers in the Laptev Sea; and in the estuaries of the Indigirka (where the whales come from the west) and the Kolyma and Ked??ma rivers (where they come from the east) in the East Siberian Sea. The amount of information obtained in other seasons is very limited. In autumn, mass migration of beluga whales from the Kara Sea to the Barents Sea have been recorded in the Karskie Vorota Strait and off Cape Zhelaniya in the north of Novaya Zemlya. In winter, almost no records of these whales have been made in the Kara, Laptev, and East Siberian seas. These data are based on previous observations and have practically not been complemented in recent years.     

Is the “3 by 5” Initiative the Best Approach to Tackling the HIV Pandemic?

BACKGROUND TO THE DEBATE: The World Health Organization (WHO) and its partners aim to treat 3 million people infected with HIV in poor and middle income countries with antiretroviral treatment by the end of 2005. The ambitious "3 by 5" initiative has had its supporters and its critics since its announcement in 2002.     

How repeatable is the estimation of developmental stability by fluctuating asymmetry?

The estimation of individual fluctuating asymmetry (FA) is subject to large sampling variabilities. Heritability estimates, as well as correlations between developmental stability and any other individual character and/or between-trait correlations, are consequently biased downward if FA is used as an estimate of an individual''s ability to buffer its development against developmental noise. The estimation of the hypothetical repeatability, defined as the ratio of the between-individual component of variation in the unsigned FA divided by the total variance, allows correction for these biases such that patterns observed for FA can be translated to make inferences about the presumed underlying developmental stability. In this paper I show that previous estimates of this repeatability are incorrect. I provide a new method and show by means of simulations that the hypothetical repeatability is in most cases even lower than previously thought. This has important consequences for the analysis of FA with respect to statistical power and the interpretation of patterns in FA.     

Are exhaled nitric oxide measurements using the portable NIOX MINO repeatable?

Background

Exhaled nitric oxide is a non-invasive marker of airway inflammation and a portable analyser, the NIOX MINO (Aerocrine AB, Solna, Sweden), is now available. This study aimed to assess the reproducibility of the NIOX MINO measurements across age, sex and lung function for both absolute and categorical exhaled nitric oxide values in two distinct groups of children and teenagers.

Methods

Paired exhaled nitric oxide readings were obtained from 494 teenagers, aged 16-18 years, enrolled in an unselected birth cohort and 65 young people, aged 6-17 years, with asthma enrolled in an interventional asthma management study.

Results

The birth cohort participants showed a high degree of variability between first and second exhaled nitric oxide readings (mean intra-participant difference 1.37 ppb, 95% limits of agreement -7.61 to 10.34 ppb), although there was very close agreement when values were categorised as low, normal, intermediate or high (kappa = 0.907, p < 0.001). Similar findings were seen in subgroup analyses by sex, lung function and asthma status. Similar findings were seen in the interventional study participants.

Conclusions

The reproducibility of exhaled nitric oxide is poor for absolute values but acceptable when values are categorised as low, normal, intermediate or high in children and teenagers. One measurement is therefore sufficient when using categorical exhaled nitric oxide values to direct asthma management but a mean of at least two measurements is required for absolute values.     

How to manage rheumatoid arthritis according to classic biomarkers and polymorphisms?

Objectives

Single nucleotide polymorphisms (SNPs), genetic background, and epigenetics play important roles in rheumatoid arthritis (RA). These factors can be useful in RA diagnosis, prognosis, and treatment response evaluation, particularly with the growing trends in personalized medicine. Therefore, categorizing classic genes and SNPs in RA can present an appropriate guideline for RA management.

Discussion

Prognostic and diagnostic biomarkers play important roles in RA diagnosis and treatment. Categorizing SNPs is not an easy process yet, but selecting classic SNPs can be useful worldwide, according to basic similarities that exist in genomes. In this review, we compiled some of these RA-associated SNPs and biomarkers in a table, according to newly identified factors. The role of epigenetics in RA is undeniable; using epigenetic biomarkers like histone deacetylase (HDACs) can be useful in RA diagnosis and treatment. miRs such as miR-146a, miR-155, and miR-222 are useful in diagnosis and can be used in treatment by interfering with other factors’ functions. Interleukins (ILs) seem to be good prognostic and diagnostic markers and can be targeted in RA treatment.

Conclusion

Using multiple types of biomarkers, such as genes, SNPs, and epigenetic biomarkers like HDACs can be useful in RA management and treatment. PTPN22, HLA-DR polymorphisms, miRs, and HDACs are considerable in RA susceptibility; hence, they can be valuable biomarkers in future studies. This article gathered separate information from approximately 100 articles to present useful biomarkers and polymorphisms in one review.

     

Can photosynthesis respond to short-term fluctuations in atmospheric carbon dioxide?

Rapid and irregular variations of atmospheric CO2 concentrations (ca) occur in nature but are often very much more pronounced and frequent when artificially enriching CO2 concentrations in simulating the future atmosphere. Therefore, there is the danger that plant responses at elevated CO2 in fumigation experiments might reflect the increased frequency and amplitude of fluctuation in concentration as well as the increase in average concentration. Tests were conducted to determine whether the photosynthetic process could sense such fluctuations in ca. Instantaneous chlorophyll fluorescence (Ft) was monitored for wheat leaves (Triticum aestivum cv. Hereward) exposed to ca oscillating symmetrically by 225 mol mol-1 about a ca set point concentration of 575 or 650 mol mol-1. No Ft response was detected to half-cycle step changes in ca lasting less than two seconds, but at half-cycles of two seconds or longer, the response of Ft was pronounced. In order to determine the in vivo linear electron transport rate (J) the O2 concentration was maintained at 21 mmol mol-1 to eliminate photorespiration. J which is directly proportional to the rate of CO2 uptake under these conditions, was not significantly changed at half-cycles of 30 s or less but was decreased by half-cycles of 60 s or longer. It was inferred that if duration of an oscillation is less than 1 minute and is symmetrical with respect to mean CO2 concentration, then there is no effect on current carbon uptake, but oscillations of 1 minute or more decrease photosynthetic CO2 uptake in wheat.     

Provisioning control during maternal care by the earwig Anisolabis maritima (Dermaptera: Anisolabididae): Do mothers adjust provisioning according to offspring need?

Provisioning offspring is an important form of parental care for the improvement of offspring survival and growth. Because provisioning can be costly for parents, parents may change their investment levels in response to offspring need and begging signals. Anisolabis maritima is a cosmopolitan species of earwig that shows subsocial behavior. Females progressively provision their young in soil burrows. The present study investigated whether A. maritima mothers carry food to the nest for their offspring (nymphs) and whether the mothers adjust the amount of food carried to the burrow according to the degree of the nymphs’ hunger. Through laboratory experiments, I found that mothers carried food to sites where more nymphs were present, and more food to broods of more hungry nymphs. These results have revealed that mothers recognize the presence of offspring and the degree of their hunger. This study, therefore, indicates the presence of offspring begging signals in A. maritima.     

An introduction to Iranian Collembola (Hexapoda): an?update to the species list

The Collembola fauna of Iran is little known and no comprehensive examination of this group of Hexapoda is available for this region. The only notable work on Collembola was carried out by Cox (1982). Recently, studies on the Collembola fauna have started in several regions. In this paper, publications by different researchers are documented and the species that have been found in different regions of Iran until January 2013 are listed. At present, 112 species, belonging to 18 families and 57 genera are known from Iran.     

How Does (E)-2-(Acetamidomethylene)succinate Bind to Its Hydrolase? From the Binding Process to the Final Result

The binding of (E)-2-(acetamidomethylene)succinate (E-2AMS) to E-2AMS hydrolase is crucial for biological function of the enzyme and the last step reaction of vitamin B₆ biological degradation. In the present study, several molecular simulation methods, including molecular docking, conventional molecular dynamics (MD), steered MD (SMD), and free energy calculation methods, were properly integrated to investigate the detailed binding process of E-2AMS to its hydrolase and to assign the optimal enzyme-substrate complex conformation. It was demonstrated that the substrate binding conformation with trans-form amide bond is energetically preferred conformation, in which E-2AMS''s pose not only ensures hydrogen bond formation of its amide oxygen atom with the vicinal oxyanion hole but also provides probability of the hydrophobic interaction between its methyl moiety and the related enzyme''s hydrophobic cavity. Several key residues, Arg146, Arg167, Tyr168, Arg179, and Tyr259, orientate the E-2AMS''s pose and stabilize its conformation in the active site via the hydrogen bond interaction with E-2AMS. Sequentially, the binding process of E-2AMS to E-2AMS hydrolase was studied by SMD simulation, which shows the surprising conformational reversal of E-2AMS. Several important intermediate structures and some significant residues were identified in the simulation. It is stressed that Arg146 and Arg167 are two pivotal residues responsible for the conformational reversal of E-2AMS in the binding or unbinding. Our research has shed light onto the full binding process of the substrate to E-2AMS hydrolase, which could provide more penetrating insight into the interaction of E-2AMS with the enzyme and would help in the further exploration on the catalysis mechanism.     

A Resolution to the Blue Whiting (Micromesistius poutassou) Population Paradox?

We provide the strongest evidence to date supporting the existence of two independent blue whiting (Micromesistius poutassou (Risso, 1827)) populations in the North Atlantic. In spite of extensive data collected in conjunction with the fishery, the population structure of blue whiting is poorly understood. On one hand, genetic, morphometric, otolith and drift modelling studies point towards the existence of two populations, but, on the other hand, observations of adult distributions point towards a single population. A paradox therefore arises in attempting to reconcile these two sets of information. Here we analyse 1100 observations of blue whiting larvae from the Continuous Plankton Recorder (CPR) from 1948–2005 using modern statistical techniques. We show a clear spatial separation between a northern spawning area, in the Rockall Trough, and a southern one, off the Porcupine Seabight. We further show a difference in the timing of spawning between these sites of at least a month, and meaningful differences in interannual variability. The results therefore support the two-population hypothesis. Furthermore, we resolve the paradox by showing that the acoustic observations cited in support of the single-population model are not capable of resolving both populations, as they occur too late in the year and do not extend sufficiently far south to cover the southern population: the confusion is the result of a simple observational artefact. We conclude that blue whiting in the North Atlantic comprises two populations.