The relative of species pools in determining plant species richness: an alternative explanation of species coexistence?

Explanations of the pattern of species have traditionally relied on small-scale, local processes occurring in ecological time. Differences in species richness have associated with different mechanisms avoiding competition, such as spatiotemporal heterogeneity (weaker competitors may find a more favourable place or time) or environmental stress (competition is assumed to be less intensive under difficult conditions). More recently, large-scale process have been taken into account, raising such questions as: which plant species may potentially grow in a certain community? Are evolutionary processes and species dispersal responsible for the differences between communities? The species-pool theory attempts to answer these general questions, and information about species pools is needed for the design of experiments where the number of species in a community is manipulated.     

Incorporating biotic factors in species distribution modeling: are interactions with soil microbes important?

It is increasingly recognized that species distributions are driven by both abiotic factors and biotic interactions. Despite much recent work incorporating competition, predation, and mutualism into species distribution models (SDMs), the focus has been confined to aboveground macroscopic interactions. Biotic interactions between plants and soil microbial communities are understudied as potentially important drivers of plant distributions. Some soil bacteria promote plant growth by cycling nutrients, while others are pathogenic; thus they have a high potential for influencing plant occurrence. We investigated the influence of soil bacterial clades on the distributions of bryophytes and 12 vascular plant species in a high elevation talus‐field ecosystem in the Rocky Mountain Front Range, Colorado, USA. We used an information‐theoretic criterion (AICc) modeling approach to compare SDMs with the following different sets of predictors: abiotic variables, abiotic variables and other plant abundances, abiotic variables and soil bacteria clade relative abundances, and a full model with abiotic factors, plant abundances, and bacteria relative abundances. We predicted that bacteria would influence plant distributions both positively and negatively, and that these interactions would improve prediction of plant species distributions. We found that inclusion of either plant or bacteria biotic predictors generally improved the fit, deviance explained, and predictive power of the SDMs, and for the majority of the species, adding information on both other plants and bacteria yielded the best model. Interactions between the modeled species and biotic predictors were both positive and negative, suggesting the presence of competition, parasitism, and facilitation. While our results indicate that plant–plant co‐occurrences are a stronger driver of plant distributions than plant–bacteria co‐occurrences, they also show that bacteria can explain parts of plant distributions that remain unexplained by abiotic and plant predictors. Our results provide further support for including biotic factors in SDMs, and suggest that belowground factors be considered as well.     

Do biotic interactions shape both sides of the humped‐back model of species richness in plant communities?

A humped-back relationship between species richness and community biomass has frequently been observed in plant communities, at both local and regional scales, although often improperly called a productivity-diversity relationship. Explanations for this relationship have emphasized the role of competitive exclusion, probably because at the time when the relationship was first examined, competition was considered to be the significant biotic filter structuring plant communities. However, over the last 15 years there has been a renewed interest in facilitation and this research has shown a clear link between the role of facilitation in structuring communities and both community biomass and the severity of the environment. Although facilitation may enlarge the realized niche of species and increase community richness in stressful environments, there has only been one previous attempt to revisit the humped-back model of species richness and to include facilitative processes. However, to date, no model has explored whether biotic interactions can potentially shape both sides of the humped-back model for species richness commonly detected in plant communities. Here, we propose a revision of Grime's original model that incorporates a new understanding of the role of facilitative interactions in plant communities. In this revised model, facilitation promotes diversity at medium to high environmental severity levels, by expanding the realized niche of stress-intolerant competitive species into harsh physical conditions. However, when environmental conditions become extremely severe the positive effects of the benefactors wane (as supported by recent research on facilitative interactions in extremely severe environments) and diversity is reduced. Conversely, with decreasing stress along the biomass gradient, facilitation decreases because stress-intolerant species become able to exist away from the canopy of the stress-tolerant species (as proposed by facilitation theory). At the same time competition increases for stress-tolerant species, reducing diversity in the most benign conditions (as proposed by models of competition theory). In this way our inclusion of facilitation into the classic model of plant species diversity and community biomass generates a more powerful and richer predictive framework for understanding the role of plant interactions in changing diversity. We then use our revised model to explain both the observed discrepancies between natural patterns of species richness and community biomass and the results of experimental studies of the impact of biodiversity on the productivity of herbaceous communities. It is clear that explicit consideration of concurrent changes in stress-tolerant and competitive species enhances our capacity to explain and interpret patterns in plant community diversity with respect to environmental severity.     

Are the speeds of species invasions regulated? The importance of null models

Understanding the mechanisms and patterns that govern the invasion of species is essential for coping with global change of the biological world. A recent study highlights the possibility, based on data from a wide range of different taxa, that the invasion speed of species could be governed by a regulatory process. In principle, it is possible that mechanisms such as Allee effects could cause the invasion fronts to be regulated, such that the change in the rate of spread is negatively related to the current rate. This is very similar to how some populations are regulated around an equilibrium size, and finding the regulation structure if true, is of both pure and applied interest. However, here we will argue that the methods used so far are incomplete, thus even though there is a theoretical possibility that the speed of species invasions are regulated, more scrutiny is needed for its detection. Analysing changes of the ratio of current and past rate of spread against current ratios may give the impression of regulation in null models that are in fact unregulated. In addition we show that the apparent pattern is highly influenced by the spatial scale of investigation. Our results show that detecting regulatory patterns in species invasions is similarly non-trivial as is detecting density-dependence per se, but necessary, given the importance of this problem.     

The micro-distribution of aquatic macroinvertebrates in the Wye river system: the result of abiotic or biotic factors?

SUMMARY. 1. Macroinvertebrates were sampled from three habitats at each of forty-five sites in the catchment of the Welsh River Wye. Micro-distribution patterns between three habitat types were assessed for those species which occurred most commonly.
2. Of the fifty-three taxa for which analysis was possible, twenty showed a significant association with habitat type. Eleven occur mostly in margins, eight mostly in riffles, and one in flats (depositing reaches).
3. Twenty-one taxa, including eleven additional to those show significant associations, showed. significant differences between habitats in their relative abundance. Ten were most abundant in margins, eight in riffles and three in flats.
4. Factors possibly responsible for these habitat preferences are discussed.     

Peptostreptococcus vaginalis or Peptostreptococcus prevotii? Identification and clinical importance of a new species of Peptostreptococcus

Peptostreptococcus vaginalis is a recently described species of Gram-positive anaerobic coccus. We report one case in which P. vaginalis was isolated in pure culture from an abscess on the upper arm, and summarise nine further cases where it was isolated in mixed culture from other superficial sites, particularly infected leg ulcers. We suggest that clinical strains of P. vaginalis have probably been described in the past as Peptostreptococcus prevotii, a species which has frequently been reported from clinical surveys of anaerobic infections; their relative importance and appropriate treatment are discussed. Preformed enzyme profiles provide a simple method of identification accessible to routine diagnostic laboratories; when clinically significant isolates of GPAC are isolated in pure growth, they should be identified to the species level by use of preformed enzyme kits.     

Is fire a selective force of seed size in pine species?

Fire is selectively shaping most of the traits of plants growing in fire-prone environments. However, seed size and other features related to seed production have not been studied in the light of the evolutionary role of fire. Our research tests the hypothesis that larger seeds have a higher chance of surviving wildfires and produce more vigorous seedlings with a lower death rate. To test this hypothesis the germination and early seedling growth of five Spanish pine species were studied. Weight, length and width of all seeds were measured. The biomass (fresh and dry weight) and length (root and total) of subsequent seedlings were also measured after 30 d from emergence. Seeds were submitted to elevated temperatures for periods in which the chance of survival was 50 % (calculated by means of a logistic model for each pine species). The differences observed among species suggests that fire may be adaptively shaping seed size in pines with larger seeds (Pinus canariensis and P. pinaster), because larger seeds are more likely to survive after heat shocks. Furthermore, in P. canariensis, seedlings after heat treatment are even larger than those submitted to control. In P. halepensis, despite being well adapted to fire, our results indicated no relationships between fire and seed characteristics. Finally, although heat treatment has a general adverse effect on seedling growth in the case of the two subalpine pines, we have detected a positive relationship between seed size and seedling growth but only in the largest seeds. This might also suggest the relevance of fire as a selective force for these pines which is outperformed by the relevance of dispersal and emergence time as adaptive traits in the post-fire scenario.     

Friend or foe? The role of leaf-inhabiting fungal pathogens and endophytes in tree-insect interactions

Trees are large organisms that structure forest ecosystems by providing an environment for an enormous diversity of animal, microbial and plant species. As these species use trees as their common hosts, many are likely to interact with each other directly or indirectly. From studies on herbaceous plant species we know that microbes can affect the interaction of plants with herbivorous insects, for example via changes in plant metabolite profiles. The consequences of fungal colonization for tree-insect interactions are, however, barely known, despite the importance of these ecological communities. In this review we explore the interaction of leaf-inhabiting pathogenic and endophytic fungi with trees and the consequences for tree-living insect herbivores. We discuss molecular, physiological, chemical, biochemical and ecological aspects of tree-fungus interactions and summarize the current knowledge on the direct and indirect effects of tree-inhabiting fungi on insect herbivores.Our mechanistic understanding of the tripartite interaction of trees with leaf-inhabiting fungi and insect herbivores is still in its infancy. We are currently facing substantial drawbacks in experimental methodology that prevent us from revealing the effect of one single fungal species on a particular insect herbivore species and vice versa. Future studies applying a versatile toolbox of modern molecular, chemical analytical and ecological techniques in combined laboratory and field experiments will unequivocally lead to a better understanding of fungus-tree-insect interactions.     

Dispersal of Triatoma infestans and other Triatominae species in the arid Chaco of Argentina: flying, walking or passive carriage? The importance of walking females

The aim of this paper was to analyse the active dispersal of Triatoma infestans and the role of chickens as passive carriers of this insect in peridomestic areas of La Rioja, Argentina. To measure active dispersal, monthly catches were made on six consecutive nights for five months (in the warm season) using light traps (for flying insects) and sticky dispersal barriers (for walking insects). The nutritional and reproductive states of adults were evaluated. Over the course of the sampling period, a total of eight flying adults, six walking nymphs and 10 walking adults of the species T. infestans were captured, as well as specimens of Triatoma guasayana, Triatoma eratyrusiformis and Triatoma platensis. Our data demonstrate for the first time that females of T. infestans can disperse by walking. This may be an adaptive strategy because it allows them to move with eggs and/or with good blood reserves, which are not possible when flying. All flying and walking individuals of both genders were of an appropriate physiological state that would allow for colonisation of the target habitat. However, manual inspection of 122 chickens suggests that it is unlikely that these animals passively transport T. infestans. Finally, the dispersal activity of T. infestans was compared with other triatomines using a dispersion index.     

Is genome size influenced by colonization of new environments in dipteran species?

Genome size differences are usually attributed to the amplification and deletion of various repeated DNA sequences, including transposable elements (TEs). Because environmental changes may promote modifications in the amount of these repeated sequences, it has been postulated that when a species colonizes new environments this could be followed by an increase in its genome size. We tested this hypothesis by estimating the genome size of geographically distinct populations of Drosophila ananassae, Drosophila malerkotliana, Drosophila melanogaster, Drosophila simulans, Drosophila subobscura, and Zaprionus indianus, all of which have known colonization capacities. There was no strong statistical differences between continents for most species. However, we found that populations of D. melanogaster from east Africa have smaller genomes than more recent populations. For species in which colonization is a recent event, the differences between genome sizes do not thus seem to be related to colonization history. These findings suggest either that genome size is seldom modified in a significant way during colonization or that it takes time for genome size of invading species to change significantly.     

Does brain size variability provide evidence of multiple species in Homo habilis?

Endocranial volume (ECV) variability as measured by the coefficient of variation (CV) has been important in supporting the view that more than one species is represented in Homo habilis. Supporters of this view used a CV of 10 as a standard to determine that 1) the H. habilis CV of 12.7 indicates multiple species and 2) there is a low probability of H. habilis specimens KNM-ER 1470 and KNM-ER 1813 being members of the same taxon. This study examines published data for ECVs of fossil and extant hominoids to determine whether CV yields any information regarding species number in H. habilis. Results indicate that there is no empirical basis for using a CV of 10 as a standard to detect multiple species in H. habilis. Also, geography, time, sample choice, sex ratio, and measurement technique are complicating factors that must be considered when interpreting CVs for fossil samples. Additionally, the broad 95% statistical confidence limits (5.1-20.3) indicate that the CV estimate of 12.7 for H. habilis is not sufficiently reliable to allow biologically meaningful interpretation. However, if the CV for H. habilis is actually 12.7, it still falls within the range of variation for single species of modern hominoids. The evidence from ECV variability does not support the argument for multiple species in H. habilis.     

Visual signals or displacement activities? The function of visual displays in agonistic interactions in nocturnal tree frogs

The efficiency of intraspecific communication directly affects male reproductive success. Acoustic signaling is the primary form of communication in nocturnal anurans. However, visual signaling can also be important in social interactions. We tested the hypothesis that open environments favor visual signals in a territorial defense context, in a nocturnal tree frog. We established three treatments each with eight males of Hypsiboas albomarginatus: (1) Clear Vision, with a mirror without visual obstacles; (2) Obstructed Vision, with half the mirror covered, and (3) Control, with mirror completely covered. We classified behavioral responses into orientation/locomotion, visual display, or acoustic signal. We calculated the mean emission rate per minute per behavior in each treatment and compared them among treatments using one-way ANOVA. Orientation and locomotion, visual display, and the advertisement call did not differ among treatments. However, the emission of aggressive calls in the Obstructed Vision treatment was significantly higher than in the Clear Vision treatment. The lowest rate of aggressive calls occurred in the Control. Thus, visual recognition of an intruder male was enough for resident males to adjust their rate of emission of acoustic aggressive signals, but not visual displays. Therefore, the recognition of the intruder male is not the only feature required for the evolution of visual signals in nocturnal tree frogs during agonistic interactions. This suggests that some visual displays may not be directly used for communication but rather constitute displacement activity.