信号分子在生物脱氮中的作用及检测方法

生物脱氮是由微生物主导的地球氮循环中的重要环节之一,主要包括硝化、反硝化和厌氧氨氧化(anaerobic ammonium oxidation,anammox)等过程。在微生物联合作用下,污水中的有机氮及氨氮经一系列作用转化为氮气,这种经济高效、环境友好的处理工艺在世界范围内得到广泛应用。群体感应(quorum sensing,QS)以信号分子为媒介通过改变菌群密度和周围环境变化来调节微生物的各种行为。大量的研究已证实调控QS信号分子在生物脱氮中具有应用潜力。本文介绍了各种信号分子类型,从基因组学、实际应用等方面综述了各类信号分子以及检测方法,同时针对酰基高丝氨酸内酯(acyl homoserine lactones,AHLs)类信号分子在生物脱氮中的作用进行详细介绍。然而不足之处在于信号分子研究只是停留在实验室阶段,仅仅研究了单一信号分子对生物脱氮的影响。未来可将信号分子应用于实际污水,研究多种信号分子共同作用以及多种微生物之间的QS现象。     

Genes and signal molecules involved in the rhizobia-leguminoseae symbiosis

The symbiosis between Rhizobium bacteria and their host plants is dependent on the specific recognition of signal molecules produced by each partner. Many players in the signal exchange have been identified. Among them are signal molecules such as flavonoids, LCOs, auxin, cytokinin, ethylene and uridine and genes such as Enod40, Enod2 and Enod12. Their interconnection, however, is only starting to be understood. The most recent insights into their interconnection include: advances in the use of transgenic leguminous plants containing reporter gene constructs for studying the effect of the signal molecules; novel methods for delivery of signal molecules using ballistic microtargeting; and the discovery of the role of chitin oligosaccharides in animal embryogenesis.     

细菌群体感应的信号转导机制及其对抗生素生产的影响

摘要：细菌的群体感应是一种群体行为调控机制。自然界中的很多细菌都有这种能力,即分泌一种或多种信号分子,通过这些信号分子的浓度来感知菌群密度,调控一系列相应靶基因的表达。在这些受调控的基因中,备受关注的是信号分子对抗生素生产的调节。本文综述了群体感应机制的最新研究进展和它对抗生素生产的调节,尤其对洋葱伯克霍尔德菌(Burkholderia. cepacia)进行了较为详细的探讨。     

AHL类似物作为细菌群体感应系统促进剂的研究进展

应用N-酰基高丝氨酸内酯（N-acyl-L-homoserine lactones，AHL）介导的群体感应（quorum sensing，QS）系统调控生物膜形成和次级代谢物合成具有巨大的商业价值，但自然界中许多微生物能够产生群体淬灭（Quorum Quenching，QQ）酶，QQ酶能够降解天然AHL信号分子，使外源天然 AHL 信号分子的半衰期缩短，限制了天然AHL 信号分子的应用范围。化学合成的AHL类似物作为QS促进剂，通过与天然信号分子类似的结合方式形成转录二聚体，激活下游基因表达，但与天然AHL信号分子相比，化学合成的QS促进剂具有活性高、半衰期长等优点。本文综述了化学合成AHL类似物的设计思路、种类、作用机制及其在提高次级代谢物产量和生物浸矿方面的应用，并讨论了QS促进剂今后主要的研究方向，以期为QS促进剂的合成设计和实际应用提供参考。     

细菌群体感应信号分子的光电检测技术

群体感应（quorum sensing，QS）是一种依赖菌群密度的细菌交流系统。在探究细菌群体感应系统的调控机制中，对QS信号分子的鉴别和检测是不可或缺的环节，其对生命科学、药学等领域涉及细菌等微生物的相互作用、高效检测和作用机制解析等具有重要的参考意义。本文在总结不同类型细菌QS信号分子来源和结构的基础上，对QS信号分子的光电检测方法和技术进行了综述，重点对光电传感检测的敏感介质、传感界面、传感机制及测试效果进行探讨，同时关注了将微流控芯片分析技术应用于细菌QS信号分子原位监测的相关研究进展。     

罂粟科植物自交不亲和反应中信号转导的研究进展

自交不亲和性是植物特异性地识别并拒绝自花或亲缘关系很近的花粉的一种遗传机制,该特异性受S基因座控制.在前人的研究基础上总结了罂粟科植物自交不亲和反应过程中信号转导的研究进展,将参与其信号级联反应的信号分子分为与S-位点连锁(包括花柱S-蛋白和花粉S-受体)和不连锁的信号分子(Ca2+、p26、p68、MAPK、细胞骨架以及PCD),并综述了各个信号分子之间的相互作用.     

自噬发生中的ROS调节机制

活性氧是细胞代谢中产生的有很强反应活性的分子,易将邻近分子氧化,并参与细胞内多种信号转导途径,对相关生理过程进行调控．自噬是真核细胞通过溶酶体机制对自身组分进行降解再利用的过程,在细胞应激及疾病发生等过程中发挥重要作用．本文对活性氧和自噬相关调节进行分类介绍,根据新近研究进展,从活性氧参与的自噬性死亡、自噬性存活以及线粒体自噬3方面探讨了相关信号转导机制,对活性氧作为信号分子参与的自噬调控途径做一总结和介绍．     

Slug的分子调控机制

Slug（Snail2）是一种具有锌指结构的上皮一间质转化（epithelial—mesenchymal transition,EMT）转录因子,在肿瘤EMT过程及癌细胞的迁移、侵袭、转移和干细胞样特性维持中起重要作用,多种信号分子及转导途径参与Slug的表达调控。本文综述了调节Slug降解和表达的信号分子及转导途径、Slug诱导的几种肿瘤相关分子及Slug与其EMT转录因子的关系。     

信号分子调控细菌生物被膜形成的分子机制

细菌生物被膜(Bacterial biofilm,BF)是黏附于机体黏膜或生物材料表面、由细菌及其分泌的多聚糖、蛋白质和核酸等组成的被膜状生物群体,是造成持续性感染的重要原因之一。细菌在生长繁殖时会产生一些次级代谢产物,部分会作为生物信号分子在细胞内或细胞间传递信息,使细菌在多细胞水平协调统一相互配合,以完成一些重要的生理学功能,如生物发光、BF的形成、运动与固定态生活方式的转换等。信号分子在BF形成过程中起着重要的调控作用。文中从密度感应系统(Quorum-sensing systems,QS)、环二鸟苷酸(Cyclic diguanylate,c-di-GMP)、双组分系统(Two-component systems,TCS)和sRNA等方面介绍影响BF形成的相关信号分子,重点对BF形成过程中的信号分子调控机制进行概述,这对于深入揭示信号分子调控BF形成的机制十分必要。     

Comparison of the capacity of murine and human class I MHC molecules to stimulate T cell activation.

The mechanism underlying the apparent differences in the capacity of murine and human class I MHC molecules to function as signal transducing structures in T cells was examined. Cross-linking murine class I MHC molecules on splenic T cells did not stimulate an increase in intracellular calcium ([Ca2+]i) and failed to induce proliferation in the presence of IL-2 or PMA. In contrast, modest proliferation was induced by cross-linking class I MHC molecules on murine peripheral blood T cells or human class I MHC molecules on murine transgenic spleen cells, but only when costimulated with PMA. Moreover, cross-linking murine class I MHC molecules or the human HLA-B27 molecule on T cell lines generated from transgenic murine splenic T cells stimulated only modest proliferation in the presence of PMA, but not IL-2. On the other hand, cross-linking murine class I MHC molecules expressed by the human T cell leukemic line, Jurkat, transfected with genes for these molecules, generated a prompt increase in [Ca2+]i, and stimulated IL-2 production in the presence of PMA. The results demonstrate that both murine and human class I MHC molecules have the capacity to function as signal transducing structures, but that murine T cells are much less responsive to this signal.     

藻际环境中微生物胞间通讯行为及作用

藻际环境中,微生物通过营养物质交换和活性物质释放相互作用,进而引发共生、竞争或合作等行为.结合环境条件的影响,藻际环境一般具有稳定而多样的微生态结构.以上行为发生的基础是以信号分子为媒介的微生物胞间通讯作用.本文系统综述了藻际环境的特征、藻际胞间通讯行为以及藻际胞间信号分子的类别与作用机制.特别针对痕量信号分子特性,结...     

植物与病原菌互作的分子机制研究进展

植物的先天免疫主要包括模式识别受体对保守的微生物病原相关分子模式的识别和抗病蛋白对效应蛋白的识别。植物与病原体互作过程中存在广泛的信号交流,信号分子在植物与病原体的互作攻防中发挥了重要的调控作用,决定了二者的竞争关系。当前,大量植物与病原体互作中的信号分子被定位和克隆,其作用方式被揭示。本文总结了这些信号分子及其在植物免疫过程中的作用机制,主要包括植物细胞表面的模式识别受体分子对病原相关分子模式的识别与应答,植物抗病蛋白对病原体效应蛋白的识别与应答,以及免疫反应下游相关信号分子及其在植物抗病中的作用。此外,本文对未来相关研究提出了展望。     

Alternate costimulatory molecules in T cell activation: differential mechanisms for directing the immune response

T cells are required for an effective immune response against a wide range of pathogens and for the generation of immunological memory. T cell activation can be divided into two phases: an antigen-specific signal delivered through the T cell antigen receptor, and a costimulatory signal delivered through accessory molecules on the T cell surface. Following activation, T cells differentiate to acquire distinct effector functions depending on the costimulatory signal, cytokine environment, and the pathogen itself. Although CD28 has been identified as the dominant costimulatory molecule, several other molecules have been described as having a costimulatory function. This review will focus on recent evidence for the existence of alternate costimulatory molecules, and the differential roles they might play in the activation, development, and survival of T cells.     

细菌群体感应信号分子N-酰基高丝氨酸内酯的检测

群体感应是细菌生长到一定密度时相互感应,并进行基因表达及调控产生的独特、多样的群体行为现象。N-酰基高丝氨酸内酯(AHL)类化合物是革兰阴性菌群体感应中最重要的一类信号分子,调控许多生理特性基因的表达。快速、简便、有效地检测细菌能否产生AHL或产生何种信号分子,成为深入研究和了解细菌群体感应的重要手段。我们就细菌群体感应信号分子AHL检测的基本原理和方法及国内外研究进展进行了总结。     

Tackling the bottleneck in bacterial signal transduction research: high‐throughput identification of signal molecules

Signal transduction processes are typically initiated by the interaction of signal molecules with sensor domains. The current lack of information on the signal molecules that feed into regulatory circuits forms a major bottleneck that hampers the understanding of regulatory processes. McKellar et al. report a high‐throughput approach for the identification of signal molecules, which is based on thermal shift assays of recombinant sensor domains in the absence and presence of compounds from commercially available ligand collections. Initial binding studies with the sensor domain of the PctA chemoreceptor of Pseudomonas aeruginosa showed a close match between thermal shift assay results and microcalorimetric studies reported previously. Using thermal shift assays the authors then identify signals that bind to three chemoreceptors of the kiwifruit pathogen P. syringae pv. Actinidiae NZ‐V13. Microcalorimetric binding studies and chemotaxis assays have validated the relevance of these ligands. The power of this technique lies in the combination of a high‐throughput analytical tool with commercially available compound collections. The approach reported is universal since it can be employed to identify signal molecules to any type of sensor domain. There is no doubt that this technique will facilitate the identification of many signal molecules in future years.     

胰岛素受体介导的信号传递

就胰岛素与其受体结合后, 信号传递的过程及参与信号传递的细胞内信号分子进行了综述.胰岛素作为一种重要激素,参与机体的新陈代谢, 调节细胞的生长分化.其发挥生理功能的第一步是与靶细胞膜上的受体相结合, 激活胰岛素受体的酪氨酸激酶活性, 随之磷酸化细胞内的信号分子, 从而使胰岛素的刺激信号转化为细胞反应.     

肌醇磷脂信号组分调节花粉发育和花粉管生长的研究进展

肌醇磷脂信号系统以肌醇磷脂代谢循环为基础, 由多种磷酸磷脂酰肌醇分子和多磷酸肌醇分子及催化代谢的磷脂酶、激酶组成。该信号系统参与调节动、植物细胞生长发育及应答环境刺激等多种生理过程。花粉发育和花粉管的生长是植物有性生殖的基础, 肌醇磷脂信号系统中多种组分参与其生理过程的调节。该文综述了植物肌醇磷脂信号系统中各组分的相互关系, 以及相关组分调节花粉发育和花粉管生长生理过程的研究进展。     

T-cell receptor alpha locus V(D)J recombination by-products are abundant in thymocytes and mature T cells.

In addition to the assembled coding regions of immunoglobulin and T-cell receptor (TCR) genes, the V(D)J recombination reaction can in principle generate three types of by-products in normal developing lymphocytes: broken DNA molecules that terminate in a recombination signal sequence or a coding region (termed signal or coding end molecules, respectively) and DNA molecules containing fused recombination signal sequences (termed reciprocal products). Using a quantitative Southern blot analysis of the murine TCR alpha locus, we demonstrate that substantial amounts of signal end molecules and reciprocal products, but not coding end molecules, exist in thymocytes, while peripheral T cells contain substantial amounts of reciprocal products. At the 5' end of the J alpha locus, 20% of thymus DNA exists as signal end molecules. An additional 30 to 40% of the TCR alpha/delta locus exists as remarkably stable reciprocal products throughout T-cell development, with the consequence that the TCR C delta region is substantially retained in alpha beta committed T cells. The disappearance of the broken DNA molecules occurs in the same developmental transition as termination of expression of the recombination activating genes, RAG-1 and RAG-2. These findings raise important questions concerning the mechanism of V(D)J recombination and the maintenance of genome integrity during lymphoid development.     

RNA silencing movement in plants

Multicellular organisms, like higher plants, need to coordinate their growth and development and to cope with environmental cues. To achieve this, various signal molecules are transported between neighboring cells and distant organs to control the fate of the recipient cells and organs. RNA silencing produces cell non-autonomous signal molecules that can move over short or long distances leading to the sequence specific silencing of a target gene in a well defined area of cells or throughout the entire plant,respectively. The nature of these signal molecules, the route of silencing spread, and the genes involved in their production, movement and reception are discussed in this review. Additionally, a short section on features of silencing spread in animal models is presented at the end of this review.     

Biofunctionalized indigo-nanoparticles as biolabels for the generation of precipitated visible signal in immunodipsticks

A novel class of organic nanoparticles as biolabels that can generate an instant visible signal was applied to immunodipsticks. A new principle for signal generation based on hydrolysis of colourless signal precursor molecules to produce coloured signal molecules followed by signal precipitation and localization was demonstrated. The nanoparticle biolabels were applied to sandwich immunoassays for the detection of mouse immunoglobulin G (M IgG). In the presence of M IgG, a nanoparticle-immunocomplex was formed and bound on the test zone immobilized with goat anti M IgG (Gt α M IgG). A blue line was developed on the test zone upon the addition of a signal developing reagent. An optical signal could be simply assessed using naked eyes or quantified using a reading device. The lowest visible signal that could be observed using naked eyes was found to be 1.25 μg L(-1) M IgG. The nanoparticle biolabel also showed a better sensitivity (signal-to-noise ratio) compared with the conventional colloidal gold biolabel. This novel class of organic nanoparticles offers an alternative biolabel system for the development of point-of-care immunodipsticks.