Ⅱ型猪圆环病毒PCR检测方法的建立及试剂盒的研制

根据Cenbank上已发表的Ⅱ型猪圆环病毒（PCV-2）的基因序列,设计并合成一对能特异性扩增Ⅱ型猪圆环病毒的引物,通过对PCR方法的优化,建立了PCR方法检测PCV-2并研制出试剂盒。然后对试剂盒的敏感性、特异性和有效期进行了研究。结果表明,该试剂盒具有很好的特异性和敏感性,有效期在-20℃至少可以保存一年。     

多重聚合酶链反应检测猪链球菌7种主要毒力因子

目的 建立2个分开的多重聚合酶链反应(PCR)体系,以及对猪链球菌7种主要毒力因子的检测。方法 根据猪链球菌7种主要毒力因子mrp、epf、sly、gdh、gapdh、orf2和fbps的基因序列,设计和合成7对特异性引物,通过对它们在2个分开反应体系PCRⅠ和PCRⅡ中的组合和优化,建立猪链球菌7种主要毒力因子的2组多重PCR检测方法,并对实验室的29株背景明确的猪链球菌保存菌株进行检测。结果 29株猪链球菌菌株的检测结果和菌株的背景情况一致,阳性、阴性对照均成立。结论 此猪链球菌7种主要毒力因子的2组分开体系的多重PCR检测方法,特异性和敏感性均好,可用于快速诊断以及猪链球菌毒力因子的分子流行病调查。     

牛化脓性隐秘杆菌病PCR诊断方法的建立

近几年犊牛化脓性肺炎发病率逐年升高, 经检测该病原以化脓性隐秘杆菌为主, 研究建立快速检测化脓性隐秘杆菌的PCR诊断方法。根据化脓性隐秘杆菌16S rRNA基因设计并合成一对特异性引物, 对PCR条件进行优化后通过特异性试验和敏感性试验检测其特异性和敏感性。扩增出927 bp目的基因, 最佳引物浓度为0.2 μmol/L、退火温度58°C、Mg2+浓度1.5 mmol/L, 特异性试验结果表明化脓性隐秘杆菌参考菌株能扩增出927 bp目的基因, 而大肠杆菌、金黄色葡萄球菌、绿脓杆菌、化脓链球菌、蜡样芽孢杆菌、沙门氏菌、肺炎克雷伯氏菌和变形杆菌等的扩增结果均为阴性。敏感性试验结果表明, PCR的最低检出量为42个化脓性隐秘杆菌。建立的牛化脓性隐秘杆菌的PCR诊断方法, 具有较高的特异性和敏感性, 为化脓性隐秘杆菌引起的牛化脓性肺炎的快速诊断及流行病学调查提供了新的手段。     

产气荚膜梭菌实时荧光PCR方法的建立

目的:利用荧光定量PCR技术,建立快速敏感特异的检测产气荚膜梭菌的方法。方法:以产气荚膜梭菌基因为靶序列设计引物和探针,以自产气荚膜梭菌菌株中提取的DNA为模板,优化引物和探针的浓度比,同时验证方法的特异性、敏感性。结果:建立的反应体系在上游引物浓度为0.45μmol/L、下游引物浓度为0.15μmol/L、探针浓度为0.3μmol/L时,具有良好的特异性和敏感性,与创伤弧菌等12种相关细菌均无交叉反应;对纯菌检测的灵敏度低于10 CFU/反应体系。结论:建立的实时荧光PCR方法特异、灵敏、快速,能对战时气性坏疽做出快速准确的报告,实现对这种战时高发疾病的安全、快速和定量检测。     

坏疽病原体快速检测方法的临床应用

目的:利用荧光定量PCR技术,建立一种快速、敏感、特异的检测产气荚膜梭菌的方法,及时用于指导临床治疗。方法:以产气荚膜梭菌16srRNA基因作为靶序列,设计一对特异引物和探针,以伤口分泌物和脓液提取的核酸作为模板,利用已经优化的引物和探针进行PCR反应;同时与细菌培养作比较,验证此方法的快速性、敏感性及特异性。结果:建立的反应体系在上游引物浓度为0.45μmol/L,下游引物浓度为0.15μmol/L,探针浓度为0.3μmol/L时,具有很好的敏感性,与21种其他细菌均无交叉反应,其敏感性为9cfu/反应体系。荧光定量PCR检测结果与细菌培养结果完全一致。结论:所建立的荧光定量PCR方法特异、灵敏、快速,能对产气荚膜梭菌感染做出准确的检测报告,具有对战时高发疾病气性坏疽进行快速和定量检测潜质。     

大鼠冠状病毒和仙台病毒的双重PCR检测方法的建立与应用

目的建立快速检测实验大鼠冠状病毒和仙台病毒的双重PCR方法。方法根据大鼠冠状病毒N基因、仙台病毒L基因设计特异性引物;经过双重PCR优化,特异性和敏感性的检测,建立双重PCR体系。应用该PCR体系检测人工感染仙台病毒组织DNA样本和实验动物组织样本,并与ELISA方法比对。结果双重PCR扩增出大鼠冠状病毒(168 bp)和仙台病毒(262 bp)目的条带,PCR扩增产物测序结果利用核酸BLAST功能进行同源序列对比,仙台病毒和大鼠冠状病毒同源性分别为100%和99%。仙台病毒和大鼠冠状病毒的检测下限为1.56×10~2 copies/μL。特异性检测对小鼠肝炎病毒扩增,产生片段大小近似大鼠冠状病毒产物。应用建立的双重PCR体系检测人工感染仙台病毒组织DNA样本,30份DNA标本均被检出;检测94份实验动物肺组织样本,结果均阴性。结论建立的双重PCR方法操作简单、快速、特异性强、灵敏度高,能够实现对实验动物仙台病毒和大鼠冠状病毒病原体的快速检测。     

龟甲DNA检测试剂盒的研制与评价

研制一种集DNA提取与PCR鉴定为一体的龟甲检测试剂盒,考察试剂盒的特异性、敏感性、重复性及稳定性。通过优化DNA提取和PCR检测方法,将所需试剂组合成试剂盒,用其提取龟甲正品及伪品mtDNA,进行PCR鉴定。试剂盒提取龟甲正品及伪品mtDNA的OD260/OD280为1.80±0.05,正品龟甲在335bp和410bp出现两条清晰条带,伪品龟甲则无条带出现,试剂盒特异性为100%,检测限为0.025 g,经反复冻融20次后依然有效,3次重复性检测均重现相同结果。龟甲DNA检测试剂盒特异性强、灵敏度高、稳定性好,适用于龟甲药材的快速检测。     

双重荧光定量PCR检测志贺毒素stx1和stx2基因

目的建立一种双重荧光定量PCR检测志贺毒素stx1和stx2基因的方法。方法根据不同细菌来源的stx1和stx2序列,设计PCR引物和TaqMan探针,建立双重实时荧光定量PCR检测体系,进行灵敏度、特异性和重复性评价,并对腹泻患者粪便样本进行检测分析。结果双重实时荧光定量PCR检测含志贺毒素基因重组质粒的最低检测下限为102copies/mL;该法对12种常见肠道病原菌均无特异性扩增,对不同浓度的标准质粒检测重复性高,Ct值变异系数均小于10%;对急性腹泻粪便标本的检测阳性率高于细菌分离培养。结论建立的双重实时荧光定量PCR可作为不同细菌来源的志贺毒素基因的快速鉴定方法,亦可用于人感染性腹泻标本的快速筛查。     

猪链球菌2型分选酶srtBCD 基因敲除株的构建及其生物学特性分析

【目的】阐明分选酶srtBCD基因在猪链球菌2型致病过程中的作用。【方法】利用同源重组原理构建中间为壮观霉素、两侧为srtBCD基因上下游片段的重组质粒,将构建好的质粒电转化入猪链球菌感受态,筛选srtBCD缺失的突变株,并通过组合PCR和逆转录PCR对其进行验证。生物学功能实验研究srtBCD突变株和野毒株05Z33在生长速率、粘附、毒力等方面的差异。【结果】组合PCR和逆转录PCR结果均证实srtBCD突变株构建成功,体外实验结果显示srtBCD缺失后细菌的生长速率减慢,与Hep-2上皮细胞的粘附率明显降低,小鼠毒力实验数据表明突变株毒力无明显变化。【结论】猪链球菌2型srtBCD基因与细菌的粘附能力有关,为进一步研究猪链球菌2型的致病机理奠定基础。     

家蚕质型多角体病毒荧光定量PCR检测方法的建立

根据GenBank报道的家蚕质型多角体蛋白基因的保守序列设计特异性引物扩增118bp核苷酸片段,使用含有目的基因片段的重组质粒标准品绘制标准曲线,建立家蚕质型多角体病毒的实时荧光定量PCR检测方法。结果表明,标准曲线中模板拷贝数(X)与Ct值(Y)关系为Y=-3.582lgX+38.748,相关系数R2=0.999,构建的实时荧光定量PCR检测方法具有良好的敏感性、特异性和重复性,可用于家蚕质型多角体病毒病的快速检验及该病的流行性调查研究。     

四川省资阳市爆发的猪链球菌感染疫情中病原菌的分离和鉴定

对四川资阳地区病猪标本、尸检肝标本和血清标本进行病原菌分离,得到10株分离菌。经菌落形态和菌体形态观察、生化鉴定,证明其中3株为猪链球菌2型(SS2)。通过对3株SS2胞外因子基因、溶菌酶释放蛋白基因、荚膜多糖基因和16S rRNA基因进行PCR扩增,结果分别在626bp8、85bp4、87bp和297bp处出现目的条带。为进一步了解分离的SS2菌株的特性,使用VITEK GPS-107药敏卡进行药敏试验,结果表明分离菌对青霉素-G、红霉素、万古霉素等多种抗生素敏感。分离菌感染Balb/c小鼠可引起动物死亡,并出现胃肠肿胀、嘴部青紫以及皮下紫斑等症状,与患者症状相似,小鼠脏器压片经革兰氏染色镜下观察可见阳性球菌。     

Fisher scientific award lecture - the capsular polysaccharides of Group B Streptococcus and Streptococcus suis differently modulate bacterial interactions with dendritic cells

Infections with encapsulated bacteria cause serious clinical problems. Besides being poorly immunogenic, the bacterial capsular polysaccharide (CPS) cloaks antigenic proteins, allowing bacterial evasion of the host immune system. Despite the clinical significance of bacterial CPS and its suggested role in the pathogenesis of the infection, the mechanisms underlying innate and, critically, adaptive immune responses to encapsulated bacteria have not been fully elucidated. As such, we became interested in studying the CPS of two similar, but unique, streptococcal species: Group B Streptococcus (GBS) and Streptococcus suis . Both streptococci are well encapsulated, some capsular types are more virulent than others, and they can cause severe meningitis and septicemia. For both pathogens, the CPS is considered the major virulence factor. Finally, these two streptococci are the sole Gram-positive bacteria possessing sialic acid in their capsules. GBS type III is a leading cause of neonatal invasive infections. Streptococcus suis type 2 is an important swine and emerging zoonotic pathogen in humans. We recently characterized the S. suis type 2 CPS. It shares common structural elements with GBS, but sialic acid is α2,6-linked to galactose rather than α2,3-linked. Differential sialic acid expression by pathogens might result in modulation of immune cell activation and, consequently, may affect the immuno-pathogenesis of these bacterial infections. Here, we review and compare the interactions of these two sialylated encapsulated bacteria with dendritic cells, known as the most potent antigen-presenting cells linking innate and adaptive immunity. We further address differences between dendritic cells and professional phagocytes, such as macrophages and neutrophils, in their interplay with these encapsulated pathogens. Elucidation of the molecular and cellular basis of the impact of CPS composition on bacterial interactions with immune cells is critical for mechanistic understanding of anti-CPS responses. Knowledge generated will help to advance the development of novel, more effective anti-CPS vaccines and improved immunotherapies.     

猪链球菌荚膜多糖合成相关基因簇保守区的克隆与分析

【目的】为了解猪链球菌各血清型荚膜多糖合成相关基因保守区的功能与基因进化关系,【方法】在分析已知的猪链球菌1、2、7、9型荚膜多糖合成相关基因簇序列,及其各orf与猪链球菌33个血清型基因组DNA杂交结果的基础上,提出猪链球菌荚膜多糖合成相关基因簇具有与肺炎链球菌相似的盒样结构的假设。并采用PCR、测序和Southern印迹杂交等方法验证这些假设。【结果】结果显示,猪链球菌的荚膜多糖合成相关基因簇确存在与肺炎链球菌相似的盒样结构,5’端的前4个调节相关基因同源性极高,基因簇两端都有保守的侧翼基因,且在3’端的侧翼序列中找到了适于扩增荚膜多糖合成相关基因簇中血清型特异性区域的下游引物所在基因(aroA)。分析发现,各血清型的orfY、orfX、cpsA、cpsB、cpsC、cpsD和aroA的亲缘关系较近。     

A polymerase chain reaction (PCR) assay specific for Streptococcus suis based on the gene encoding the glutamate dehydrogenase

Polymerase chain reaction (PCR) primers that flank a 688-bp segment within the glutamate dehydrogenase gene (gdh) of Streptococcus suis type 2 could amplify efficiently the DNA of all 306 (100%) clinical S. suis isolates tested (pigs, n=305; human, n=1) encompassing all serotypes obtained from diverse organs, and geographic origins. When DNA from other bacteria were used as templates for amplification, no product was detected indicating specificity of the primers. Multiplex PCR was developed using the gdh gene primer pair and primers that targeted the gene encoding S. suis capsular biosynthesis (cps). This strategy enabled the detection of strains belonging to serotypes 1/2, 1, 2, 7, and 9, respectively. Using the multiplex-PCR technique, 12 out of 14 (86%) isolates that were previously identified as non-typable S. suis (based on biochemical reactions and serology) gave positive PCR results of which four were positive for serotype 7, three for serotype 2, and five for S. suis strains that belong to other serotypes. Retest results of all 14 isolates by several veterinary laboratories were identical with PCR and confirmed that the two non-PCR reactive isolates belonged to strains of other streptococcal species. These results indicated that PCR improved species determination and can thus be used as a reliable species-specific molecular diagnostic reagent for the accurate identification of S. suis isolates and a serotype-specific method for the detection of strains of serotypes 1/2, 1, 2, 7, and 9, respectively. The PCR method therefore has potential clinical and epidemiological applications.     

First LightCycler real-time PCR assay for the quantitative detection of Mycoplasma suis in clinical samples

Mycoplasma suis cannot be cultivated in vitro. Therefore, PCR-based methods are irreplaceable for the diagnosis of M. suis infections especially when clinical symptoms are not evident. Currently, no easy and reliable method allowing the quantitative detection of M. suis is available. This report describes the development of a quantitative LightCycler PCR assay based on the msg1 gene of M. suis (LC MSG1 PCR). No PCR signals were obtained with closely related haemotrophic and non-haemotrophic mycoplasmas, with other bacteria, and with M. suis-free blood and tissue arguing for a high analytical specificity. Test sensitivity was found to be 100%, and test specificity 96.7%. To test the diagnostic suitability of the LC MSG1 PCR, 25 pigs with clinical porcine eperythrozoonosis and 25 healthy pigs were investigated. All ill pigs revealed a positive real-time PCR result whereas only one healthy pig was detected to be M. suis-infected. M. suis was quantitatively detected in 19 blood specimens of 100 sows from Switzerland and in 17 of 160 post-weaning piglets from Germany. In conclusion, this new LC MSG1 PCR assay represents a powerful tool for the improvement of the current M. suis diagnosis and for prevalence and pathogenesis studies.     

A Multiplex PCR Assay Mediated by Universal Primer for the Diagnosis of Human Meningitis Caused by Six Common Bacteria

The present study aimed to develop a universal primer-multiplex PCR (UP-M-PCR) assay for the detection of six common bacteria associated with human meningitis. One optimal universal primer (UP) was selected from three UPs by comparing their sensitivities and specificities. All specific primers were tagged with the UP sequence at 5' end, and applied to the multiplex PCR system. The multiplex system was further optimized and assessed. This UP-M-PCR can successfully detect the six meningitis-associated pathogens with high specificity, and the sensitivity could reach up to 10 copies. In the identification of clinical specimens, six positive cases infected with Streptococcus agalactiae, Staphylococcus aureus, and Streptococcus pneumoniae were confirmed. The newly developed multiplex PCR system can be used to detect the six pathogens associated with human bacterial meningitis with high specificity and sensitivity.     

Genetic analysis of the capsular polysaccharide synthesis locus in 15 Streptococcus suis serotypes

The capsular polysaccharide (CPS) synthesis locus of 13 Streptococcus suis serotypes (serotype 1, 3, 4, 5, 7, 8, 9, 10, 14, 19, 23, 25 and 1/2) was sequenced and compared with that of serotype 2 and 16. The CPS synthesis locus of these 15 serotypes falls into two genetic groups. The locus is located on the chromosome between orfZ and aroA. All the translated proteins in the CPS synthesis locus were clustered into 127 homology groups using the tribemcl algorithm. The general organization of the locus suggested that the CPS of S.?suis could be synthesized by the Wzy-dependent pathway. The capsule of serotypes 3, 4, 5, 7, 9, 10, 19 and 23 was predicted to be amino-polysaccharide. Sialic acid was predicted to be present in the capsule of serotypes 1, 2, 14, 16 and 1/2. The characteristics of the CPS synthesis locus suggest that some genes may have been imported into S.?suis (or their ancestors) on multiple occasions from different and unknown sources.     

浙江省某猪场暴发II型猪链球菌感染及病原诊断和药敏试验

报告 2 0 0 3年秋季浙江省某猪场II型猪链球菌感染猪群的微生物学检查和药物敏感试验结果 ,以及采取的控制疫情措施及其效果。从 112头病、死猪中分离出 71株猪链球菌疑似菌株 ,经革兰染色镜检、生化反应和特异性诊断血清的玻片凝集 ,均鉴定为II型猪链球菌。上述II型猪链球菌分离株对阿莫西林等 5种抗生素敏感 ,但对庆大霉素等 7种抗生素耐药。采取饲养环境和饲料消毒、发病猪隔离、阿莫西林和环丙沙星治疗、未发病猪疫苗接种等措施 ,有效地控制了疫情 ,未发生人的感染。     

猪链球菌2型疫苗研究进展

猪链球菌2型可引起人、猪急性败血型、脑膜炎型和关节炎型等传染病,致死率极高,是近年来致病性最强、危害性最大的猪链球菌类型之一。目前因该菌的致病机理不清、抗原类型复杂,限制了疫苗研究的顺利进行。当前在研的猪链球菌2型疫苗类型有死疫苗、弱毒苗、蛋白亚单位疫苗等。