Long‐term ecological monitoring and institutional memories

Many important ecological management issues can only be addressed by long‐term monitoring or through studies carried out over extended periods. But such studies require institutional settings that ensure funding is sustained and that data arising from these studies are securely managed. Recent experience suggests both are difficult to achieve. This is because management agencies and research bodies are periodically restructured, especially in recent years. This has often led to long‐term work being terminated. But there is anecdotal evidence that the data collected in at least some of these studies are not always lost. Instead, it can remain stored in the back rooms of agencies or in the personal files of former staff. Such data are clearly at risk; with time fewer people remain aware of the work or of the existence of data that were collected, thereby increasing the likelihood that the information will eventually disappear. This seems a waste. Securing funds for any long‐term ecological study is always likely to be difficult, and many of these previous long‐term studies are likely to be relevant to some of our present management problems. One approach to taking advantage of these earlier studies would be to ask scientific and professional associations to survey their older members to identify relevant previous investigations. But any re‐establishment of former studies will require the creation of new institutional arrangements, more robust institutional memories and sufficient funds that are able to sustain any resurrected investigations into the future.     

Long‐term monitoring of social behavior in a grouping of six female tigers (Panthera tigris)

Although literature on the reproduction of captive tigers is plentiful, there is little information on other social behaviors, particularly within large social groupings. Here we report on the long‐term monitoring of social behaviors in six female tigers (Panthera tigris). Over a period of 6 years, behavioral data were collected on spraying, vocalizations, non‐contact aggression, and contact aggression during outdoor observations, as well as nearest neighbors in the morning, as a proxy measure of affiliation. Regression analyses showed that non‐contact aggression and vocalizing were increasing, whereas spraying and social proximity were decreasing over the 6 years of the study. Paired t‐tests showed no seasonal differences in aggression, but animals had higher social proximity scores during the mornings of the colder winter months. Correlations showed that spraying was positively related to contact aggression whereas social proximity was negatively correlated with non‐contact aggression. In addition to documenting levels of contact and non‐contact aggression over time, this study showed these behaviors correlated with behaviors that were more easily scored (spraying and social proximity). Behavioral monitoring has played a key role in the management and husbandry of this large social grouping of female tigers. In addition to providing keepers with the opportunity to observe their animals in regularly scheduled sessions, behavioral monitoring has provided baseline information on social relationships in this grouping over time. If future research validates the relationship between aggression and spraying/social proximity, this can be a valuable tool for long‐term monitoring of groups of tigers. Zoo Biol 27:89–99, 2008. © 2007 Wiley‐Liss, Inc.     

Alpha B‐crystallin promotes the invasion and metastasis of gastric cancer via NF‐κB‐induced epithelial‐mesenchymal transition

Alpha B‐crystallin (CRYAB) is overexpressed in a variety of cancers. However, little is known about its specific function and regulatory mechanism in gastric cancer. Here, we first explore the role of CRYAB in gastric cancer progression and metastasis. The expression of CRYAB was determined by western blot and immunohistochemistry in gastric cancer tissues. Besides, methods including stably transfected against CRYAB into gastric cancer cells, western blot, migration and invasion assays in vitro and metastasis assay in vivo were also conducted. The expression of CRYAB is up‐regulated in gastric cancer tissues compared with matched normal tissues. High expression level of CRYAB is closely correlated with cancer metastasis and shorter survival time in patients with gastric cancer. Additionally, CRYAB silencing significantly suppresses epithelial‐mesenchymal transition (EMT), migration and invasion of gastric cancer cells in vitro and in vivo, whereas CRYAB overexpression dramatically reverses these events. Mechanically, CRYAB facilitates gastric cancer cells invasion and metastasis via nuclear factor‐κ‐gene binding (NF‐κB)‐regulated EMT. These findings suggest that CRYAB expression predicts a poor prognosis in patients with gastric cancer. Besides, CRYAB contributes to gastric cancer cells migration and invasion via EMT, mediated by the NF‐κB signalling pathway, thus possibly providing a novel therapeutic target for gastric cancer.     

Long‐term monitoring of shrub species translocation in degraded Neotropical mountain grassland

The introduction of plant species is a central topic in restoration ecology research. It is an effective technique to restore degraded ecosystems that present low resilience, such as the rupestrian grasslands. Once implemented, the transplantation of native species is monitored only in the short term, whereas long‐term monitoring should be preferred to identify potential changes in the restoration results. Our study is the first assessment of the transplantation success of 10 native shrub species in a degraded area of rupestrian grasslands, 8.5 years after transplantation. Survival, growth, and recruitment were assessed in 2004, 2008, and 2012. For all species, survival, growth, and recruitment varied over time. Although some species exhibited great mortality during the last 4 years, they also showed a great resprouting ability. Our results highlighted a trade‐off between survival and recruitment capacity. Most of the studied species showed remarkable ability to adapt to the extreme environment of the degraded area, persisting either through surviving or recruiting new individuals. We list nine native species, which are well appropriated for rupestrian grasslands restoration. In constrained environments, survival and resistance should represent criteria to select species for restoration project rather than fast growth and ground cover.     

Long‐term body pigmentation changes on a manta ray (Mobulidae)

Manta rays (genus Manta) are listed as vulnerable on the IUCN Red List based partly on population studies that use body coloration and ventral spot patterns to identify and count individuals, as a result of such patterns being considered unique and permanent during their lifetime. The present study reports the first evidence of long‐term coloration changes of manta rays based on observations of one captive individual. Darkening skin pigmentation was documented on the side of the head, the inner side of the cephalic lobes and the pectoral fin margin of the ventral side, and spot markings appeared on the gill slits within 9 months. These changes were most likely ontogenetic or were connected to maturation. The described specimen's coloration did not fulfill the taxonomic classification criteria of either manta ray species and rather resembled two different manta ray species at the beginning and end of the study. These results show that coloration patterns of manta rays are not as stable as has been assumed previously. Further studies are needed to identify the extent of such changes for accurate identification and classification of manta rays. © 2014 The Linnean Society of London, Biological Journal of the Linnean Society, 2015, 114 , 406–414.     

Changes in phytophagous insect host ranges following the invasion of their community: Long‐term data for fruit flies

The invasion of an established community by new species can trigger changes in community structure. Invasions often occur in phytophagous insect communities, the dynamics of which are driven by the structure of the host assemblage and the presence of competitors. In this study, we investigated how a community established through successive invasions changed over time, taking the last invasion as the reference. The community included four generalist and four specialist species of Tephritidae fruit flies. We analyzed a long‐term database recording observed numbers of flies per fruit for each species on 36 host plants, over 18 years, from 1991 to 2009. Community structure before the last invasion by Bactrocera zonata in 2000 was described in relation to host plant phylogeny and resource availability. Changes in the host range of each species after the arrival of B. zonata were then documented by calculating diversity indices. The flies in the community occupied three types of niches defined on the basis of plant phylogeny (generalists, Solanaceae specialist, and Cucurbitaceae specialists). After the arrival of B. zonata, no change in the host range of specialist species was observed. However, the host ranges of two generalist species, Ceratitis quilicii and Ceratitis capitata, tended to shrink, as shown by the decreases in species richness and host plant α‐diversity. Our study shows increased host specialization by generalist phytophagous insects in the field following the arrival of an invasive species sharing part of their resources. These findings could be used to improve predictions of new interactions between invaders and recipient communities.     

Long‐term metapopulation study of the Glanville fritillary butterfly (Melitaea cinxia): survey methods,data management,and long‐term population trends

Long‐term observational studies conducted at large (regional) spatial scales contribute to better understanding of landscape effects on population and evolutionary dynamics, including the conditions that affect long‐term viability of species, but large‐scale studies are expensive and logistically challenging to keep running for a long time. Here, we describe the long‐term metapopulation study of the Glanville fritillary butterfly (Melitaea cinxia) that has been conducted since 1991 in a large network of 4000 habitat patches (dry meadows) within a study area of 50 by 70 km in the Åland Islands in Finland. We explain how the landscape structure has been described, including definition, delimitation, and mapping of the habitat patches; methods of field survey, including the logistics, cost, and reliability of the survey; and data management using the EarthCape biodiversity platform. We describe the long‐term metapopulation dynamics of the Glanville fritillary based on the survey. There has been no long‐term change in the overall size of the metapopulation, but the level of spatial synchrony and hence the amplitude of fluctuations in year‐to‐year metapopulation dynamics have increased over the years, possibly due to increasing frequency of exceptional weather conditions. We discuss the added value of large‐scale and long‐term population studies, but also emphasize the need to integrate more targeted experimental studies in the context of long‐term observational studies. For instance, in the case of the Glanville fritillary project, the long‐term study has produced an opportunity to sample individuals for experiments from local populations with a known demographic history. These studies have demonstrated striking differences in dispersal rate and other life‐history traits of individuals from newly established local populations (the offspring of colonizers) versus individuals from old, established local populations. The long‐term observational study has stimulated the development of metapopulation models and provided an opportunity to test model predictions. This combination of empirical studies and modeling has facilitated the study of key phenomena in spatial dynamics, such as extinction threshold and extinction debt.     

Long‐term persistence of wildlife populations in a pastoral area

Facilitating coexistence between people and wildlife is a major conservation challenge in East Africa. Some conservation models aim to balance the needs of people and wildlife, but the effectiveness of these models is rarely assessed. Using a case‐study approach, we assessed the ecological performance of a pastoral area in northern Tanzania (Manyara Ranch) and established a long‐term wildlife population monitoring program (carried out intermittently from 2003 to 2008 and regularly from 2011 to 2019) embedded in a distance sampling framework. By comparing density estimates of the road transect‐based long‐term monitoring to estimates derived from systematically distributed transects, we found that the bias associated with nonrandom placement of transects was nonsignificant. Overall, cattle and sheep and goat reached the greatest densities and several wildlife species occurred at densities similar (zebra, wildebeest, waterbuck, Kirk's dik‐dik) or possibly even greater (giraffe, eland, lesser kudu, Grant's gazelle, Thomson's gazelle) than in adjacent national parks in the same ecosystem. Generalized linear mixed models suggested that most wildlife species (8 out of 14) reached greatest densities during the dry season, that wildlife population densities either remained constant or increased over the 17‐year period, and that herbivorous livestock species remained constant, while domestic dog population decreased over time. Cross‐species correlations did not provide evidence for interference competition between grazing or mixed livestock species and wildlife species but indicate possible negative relationships between domestic dog and warthog populations. Overall, wildlife and livestock populations in Manyara Ranch appear to coexist over the 17‐year span. Most likely, this is facilitated by existing connectivity to adjacent protected areas, effective anti‐poaching efforts, spatio‐temporal grazing restrictions, favorable environmental conditions of the ranch, and spatial heterogeneity of surface water and habitats. This long‐term case study illustrates the potential of rangelands to simultaneously support wildlife conservation and human livelihood goals if livestock grazing is restricted in space, time, and numbers.     

Long‐term variation in the distribution of the White‐bellied Sea‐Eagle (Haliaeetus leucogaster) across Australia

Abstract The White‐bellied Sea‐Eagle Haliaeetus leucogaster (Accipitridae) is widespread within Australia. However, in a number of states it is thought to be declining locally in response to human induced disturbance. Here we analyse the Australian Bird Atlas data to identify the extent and pattern of change in range and density of the species between three Atlas Periods (1901–1976, 1977–1981 and 1998–2001) using a new standardized frequency measure, the Occupancy Index (OI) for 1° blocks (approx. 100 km²) across the continent. At the continental scale, there was no significant difference in the spatial extent of occupancy between Atlas Periods. However, there were considerable changes in frequency and range extent between defined regions, and there were distinct differences in the pattern of change in OI between coastal and inland blocks over time. Coastal blocks showed much more change than inland blocks, with a clear increase in the use of coastal blocks, accompanied by a decrease in inland blocks, during the 1977–1981 Atlas Period, relative to both other Atlas Periods. While there were slight (and not statistically significant) trends for OI to increase in areas containing dams, and to decrease in urbanized coastal areas, the over‐riding factor associated with distributional shifts and frequency changes was apparently climatic fluctuation (the 1977–1981 period showing the influence of El Niño associated drought). Within this study, the impression of abundance was strongly dependent on both the temporal and spatial scale of analysis. This highlights the importance of large‐scale analysis in interpreting change in distribution and abundance of widespread species.     

Long‐term changes in ground beetle (Coleoptera: Carabidae) assemblages in Scotland

1. One‐way, directional changes in both plant and animal associations are likely to be occurring as a result of changing climate. Current knowledge of long‐term cycles in insect communities is scarce, and therefore it is difficult to assess whether the observed changes in insect communities are the first part of a long‐term trend or parts of normal cycles. 2. In this study multivariate methods were used to describe the trends in ground beetle (Coleoptera: Carabidae) assemblages over an 18‐year (1994–2011) period at two Scottish sites. In order to have a deeper insight into the underlying processes, both environmental factors and the species driving the detected changes were investigated. 3. In four out of the six sample transects, insect community compositions showed trends rather than fluctuating patterns. Hierarchical cluster analysis also revealed a clear separation, after accounting for sampling location and broad habitat, between early and later years of sampling. Decreasing annual maximum temperatures and increasing precipitation were identified as the main environmental drivers. Although increased rainfall was expected to be beneficial for hygrophilous species, in the transects in this study generalist species increased in dominance. 4. The increasing importance of generalists, in the communities studied here, underlines the vulnerability of the specialist species and urges greater effort in their conservation. Assemblage changes along different trajectories at the sites in the present study could only be tracked using multivariate methods; commonly used diversity indices proved to be unsatisfactory. Therefore, the exclusive use of simple diversity indices should be discouraged and multivariate methods should be preferred in environmental assessments and conservation planning.     

Long‐term Effects of Prenatal Stress and Glucocorticoid Exposure

There is a growing body of evidence suggesting that events during prenatal life can have long‐lasting effects on development and adult health. Stress during pregnancy is common and has been linked to increased incidence of a range of affective and behavioral outcomes in the offspring in later life and also some somatic outcomes. Glucocorticoids, and their actions on the fetus, which are regulated by placental 11β‐hydroxysteroid dehydrogenase type 2 (11β‐HSD2), are hypothesized to mediate these effects. Animal studies have demonstrated long‐term effects of stress and glucocorticoid administration on behavioral outcomes, as well as increased blood pressure, altered hypothalamic pituitary adrenal axis (HPA) function, and decreased glucose tolerance and brain size. In humans, licorice, which inhibits placental 11β‐HSD2 when consumed during pregnancy, has been shown to increase the risk of behavioral problems linked to altered HPA activity. Synthetic glucocorticoids administered during pregnancy to improve fetal lung maturity in threatened preterm birth have been shown to reduce birth weight and head circumference, but have not been linked to grosschanges in long‐term health todate. It is important to consider thelong‐term consequences of stress, and medication that mimics stress, during pregnancy. Birth Defects Research (PartC) 96:315–324, 2012. © 2013 Wiley Periodicals, Inc.     

Long‐term population dynamics of a coral reef gastropod and responses to disturbance

The age‐specific density of the red‐lipped stromb Strombus luhuanus (Mollusca: Gastropoda) was monitored over 13 years (1981–1993) at four locations on the intertidal reef flat at Heron Island, Great Barrier Reef. Densities were highly variable, but there were persistent, location‐specific differences in population density, age structure and adult body size, the latter indicating that the populations were not extensively linked by adult movement. There was relatively high recruitment at most locations in 1984, 1989 and 1993, each occurring approximately 2 years after El Niño/Southern Oscillation events, although recruit density during these years varied in both space and time. The studied strombs experienced three disturbance events: (i) experimental harvesting at two locations (1984–1985); (ii) siltation from a harbour dredging operation (1987–1988); and (iii) a severe cyclone (1992). Resilience to harvesting at a local scale (0.5–2 ha) was high: density had recovered within a year, due to immigration of adults and older juveniles. Strombus luhuanus responded much more strongly to broad‐scale changes to its environment than to localized harvesting. After dredging, there was a progressive density decline coupled with low recruitment at two locations, and a later decline at a third location, followed by a recruitment‐driven rebound after the cyclone. Generalized environmental effects of siltation and the cyclone were also reflected in substantial changes in algal cover. Long‐term variations in environmental conditions probably cause high temporal variation over large spatial scales through effects on the survival of larvae or recruits. Localized short‐term field monitoring of such species would give a misleading picture of key factors affecting population dynamics.     

The possible roles of B‐cell novel protein‐1 (BCNP1) in cellular signalling pathways and in cancer

B‐cell novel protein‐1 (BCNP1) or Family member of 129C (FAM129C) was identified as a B‐cell‐specific plasma‐membrane protein. Bioinformatics analysis predicted that BCNP1 might be heavily phosphorylated. The BCNP1 protein contains a pleckstrin homology (PH) domain, two proline‐rich (PR) regions and a Leucine Zipper (LZ) domain suggesting that it may be involved in protein‐protein interactions. Using The Cancer Genome Atlas (TCGA) data sets, we investigated the correlation of alteration of the BCNP1 copy‐number changes and mutations in several cancer types. We also investigated the function of BCNP1 in cellular signalling pathways. We found that BCNP1 is highly altered in some types of cancers and that BCNP1 copy‐number changes and mutations co‐occur with other molecular alteration events for TP53 (tumour protein P53), PIK3CA (Phosphatidylinositol‐4,5‐Bisphosphate 3‐Kinase, Catalytic Subunit Alpha), MAPK1 (mitogen‐activated protein kinase‐1; ERK: extracellular signal regulated kinase), KRAS (Kirsten rat sarcoma viral oncogene homolog) and AKT2 (V‐Akt Murine Thymoma Viral Oncogene Homolog 2). We also found that PI3K (Phoshoinositide 3‐kinase) inhibition and p38 MAPK (p38 mitogen‐activated protein kinase) activation leads to reduction in phosphorylation of BCNP1 at serine residues, suggesting that BCNP1 phosphorylation is PI3K and p38MAPK dependent and that it might be involved in cancer. Its degradation depends on a proteasome‐mediated pathway.     

Evolutionary dynamics of a B chromosome invasion in island populations of the grasshopper Eyprepocnemis plorans

Four natural populations of the grasshopper Eyprepocnemis plorans in the Mallorca island were analysed for several years revealing the recent invasion of the B₁ chromosome from the south‐west part of the island (Palma region) towards the north and to the east. In only 10 years, the mean number of Bs in the northern population at Pollença increased from 0.053 to 0.692. Therefore, B chromosome invasion seems to be very rapid and has recently arrived to the north of the island. The south‐west (close to Palma) is the most likely point at which B invasion started in the Mallorca Island. Finally, the number of B chromosomes was significantly associated to an increase in chiasma frequency (and thus recombination) in A chromosomes.     

Long‐term evaluation of field‐wide oriental beetle (Col., Scarabaeidae) mating disruption in blueberries using female‐mimic pheromone lures

The oriental beetle, Anomala orientalis (Waterhouse) (Col., Scarabaeidae), is the most important root‐feeding pest of blueberries and turfgrass in New Jersey, USA. Previous studies showed that mating disruption is a feasible option for oriental beetle management; however, assessing its efficiency can be challenging, and little is known on its long‐term effects. Accordingly, we conducted studies to investigate low‐dose pheromone lures equivalent to oriental beetle females (i.e. female mimics) as easy‐to‐use indicators of mating disruption success, determine the distance at which oriental beetle males respond to female‐mimic lures and assess the long‐term (3‐year) effects of mating disruption on oriental beetle populations in entire blueberry fields. Our studies showed that rubber septa baited with 0.3 μg of the oriental beetle sex pheromone (Z)‐7‐tetradecen‐2‐one attract similar numbers of males as compared with virgin females and can thus be used as a female mimic. The range of attraction of this lure was found to be also similar to virgin females and <30 m. In blueberries, mating disruption provided 87% inhibition of oriental beetle populations (trap shutdown) over a 3‐year period. Oriental beetle male captures in disrupted fields were threefold higher along the field edges than in the field interiors, indicating movement of males from nearby areas into the pheromone‐treated fields. In addition, mating disruption reduced male attraction to female‐mimic lures by 93% in all 3 years and reduced the number of larvae in sentinel potted plants in 1 of 2 years. These results show for the first time that mating disruption provides consistent long‐term field‐wide control of oriental beetle populations and that female‐mimic pheromone lures can be used as a new tool to assess oriental beetle mating disruption success.     

Long‐term breeding demography and density dependence in an increasing population of Golden Eagles Aquila chrysaetos

Few studies have quantified the dynamics of recovering populations of large raptors using long‐term, spatially explicit studies. Using data collected over 37 years in the western Italian Alps, we assessed the trends in distribution, abundance, fecundity and breeding population structure of Golden Eagles Aquila chrysaetos. Using the spatial distribution of territory centroids in 2007, we found that the spatial distribution of eagle territories was over‐dispersed up to 3 km. Although population size and total productivity increased from 1972 to 2008, the proportion of pairs that laid eggs showed a strong decline, falling to no more than 50% after 2003. On average, 15% of successful nests produced two fledglings, and productivity also declined over time. No significant relationship between population growth rate and total population size was detected, but the percentage of pairs that bred and breeding success showed evidence of density dependence, as they declined significantly with increasing density. Our results suggest that density dependence, operating across heterogeneous habitats, is currently regulating this population, while the carrying capacity may still be increasing. This may explain the apparent paradox of reduced breeding effort despite increasing total productivity.     

Long‐term decline of native freshwater mussel assemblages in a federally protected river

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Long‐term changes in the fish assemblage of a neotropical hydroelectric reservoir

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