Temporal variation of energy reserves in mayfly nymphs (Hexagenia spp.) from Lake St Clair and western Lake Erie

1. We analysed changes in energy reserves (lipid and glycogen) and length–weight relationships of burrowing mayflies (Hexagenia spp.) in 1997–99 to compare an established population in Lake St Clair with a recovering population in western Lake Erie of the Laurentian Great Lakes. In addition, we measured changes in water temperature and potential food in both water columns and sediments. 2. Although overall mean values of lipid and glycogen levels of Hexagenia nymphs from Lake St Clair and western Lake Erie were not significantly different, there were differences in seasonal patterns between the two lakes. In Lake St Clair, levels were highest in early spring, declined throughout the year, and reached their lowest levels in fall during all 3 years of study. In contrast, levels in western Lake Erie were lower in spring, increased to a maximum in summer, then declined in fall. Seasonal patterns in length–weight relationships were similar to those for lipid and glycogen. 3. Total lipid as a percentage of dry weight did not increase with developmental stage of nymphs until just prior to metamorphosis and emergence from water. However, the major reserve lipid, triacylglycerols, increased systematically with development stage. In the final stage of development, triacylglycerols declined, probably as a result of energy consumption and its conversion to other biochemical components for metamorphosis and reproduction. 4. Indicators of potential food (algal fluorescence in the water column and chlorophyll a and chlorophyll a/phaeophytin ratio in sediments) suggest that Hexagenia in Lake St Clair have a food source that is benthic based, especially in early spring, whereas in western Lake Erie nymphs have a food source that is water column based and settles to the lake bottom during late spring and summer.     

Plasma cortisol and sex steroid levels in Great Lakes coho salmon (Oncorhynchus kisutch Walbaum) in relation to fecundity and egg survival

Plasma 11-ketotestosterone and cortisol levels in spawning male and female coho salmon (Oncorhynchus kisutch Walbaum) collected from a Lake Erie (Pennsylvania) stock were significantly lower (P less than 0.01) than in stocks of coho salmon at a comparable stage of sexual development collected from Lakes Ontario (two stocks) or Michigan. Plasma testosterone levels in female coho salmon from Lake Erie were significantly lower (P less than 0.01) than in females from Lake Ontario or Lake Michigan stocks. There were no significant differences in plasma testosterone levels in the males, or 17 beta-estradiol levels in male or female salmon of the four stocks sampled from the three study lakes. This apparent dysfunction in androgen and cortisol secretion in the Lake Erie stock is correlated with and may account for the low fecundity and poor expression of secondary sexual characteristics in that stock.     

Thyroid function, pituitary structure and serum lipids in Great Lakes coho salmon, Oncorhynchus kisutch Walbaum, 'jacks' compared with sexually immature spring salmon

Whereas spring salmon, Oncorhynchus kisutch , from Lake Ontario had no overt thyroid goiters, comparable Lake Erie spring salmon had a 44% goitre incidence. Goitre incidence in sexually precocious 'jacks' from Lakes Ontario and Michigan was 43–45% and 100% in 'jacks' from Lake Erie.
All fish displayed thyroid hyperplasia. The degree of hyperplasia (as indicated by thyroid follicle colloid content, thyroid follicle size and shape and thyroid follicle epithelial cell size) in Lake Ontario fish tended to be greater in the 'jacks' than in the spring fish; the reverse was true in Lake Erie fish. Serum total L-thyroxine (T4) concentrations in Lake Ontario spring fish were higher than in any other group. There were no differences in serum T, levels between the groups of 'jacks', nor were serum T, levels in 'jacks' and spring salmon from Lake Ontario significantly different. Serum total triiodo-thyronine (T) concentrations in Lake Ontario spring salmon were significantly higher than in all other groups and that in Lake Erie spring salmon greater than in all groups of 'jacks'. Serum T, levels in Lake Ontario 'jacks' were higher than in Lake Erie 'jacks'. Serum free fatty acid (FFA) and cholesterol levels showed significant interlake differences with lower levels present in Lake Erie salmon. Lake Erie 'jacks' appeared to have fewer and less well vacuolated pituitary gonadotropic basophils than 'jacks' from Lakes Michigan and Ontario. Putative thyrotrop cells appeared to be more numerous and more active in the Lake Erie spring salmon compared with Lake Ontario spring salmon. Prolactin, corticotrop and melanotrop cells appeared less active in spring salmon than in the 'jacks'.     

Determining algal-available phosphorus of differing origin: routine phosphorus analyses versus algal assays

Eutrophication of surface waters can be accelerated by anthropogenic P-inputs, provided that P is in a form available to aquatic primary producers. Potentially algal-available P (P_aa) under aerobic conditions was determined with a dual-culture assay from 172 samples representing P in point and nonpoint sources and in lacustrine matter. The availability of P – expressed as the proportion of P_aa in total P (Tot-P) – ranged from 0 to 100%. In the different P sources, the mean availability ranged from 3.4 to 89% in descending order: wastewater of rural population > biologically treated urban wastewater > dairy house wastewater > biologically and chemically treated urban wastewater > field runoff > forest industrial effluent > fish fodder and feces > river water > field surface soil > forest runoff > lake settling matter > lake bottom sediments. Of the P fractions, dissolved reactive P (o-P) was highly available to algae, whereas particulate P (P_part) and dissolved unreactive P (unr-P_diss) contributed to P_aa to a lower but varying degree. An approach based on source-dependent availability coefficients, derived from the algal assays, appeared promising in transforming the load of Tot-P into that of P_aa. Although the values for P_aa obtained by the dual-culture assay probably underestimate the true levels for ultimately available P, they may still give valuable information for eutrophication abatement.     

Changing Abundance of Hexagenia Mayfly Nymphs in Western Lake Erie of the Laurentian Great Lakes: Impediments to Assessment of Lake Recovery?

After an absence of 40 years, mayfly nymphs of the genus Hexagenia were found in sediments of western Lake Erie of the Laurentian Great Lakes in 1993 and, by 1997, were abundant enough to meet a mayfly‐density management goal (ca. 350 nymphs m^—2) based on pollution‐abatement programs. We sampled nymphs in western Lake Erie and Lake St. Clair, located upstream of western Lake Erie, to determine the importance of seasonal abundance and life‐history characteristics of nymphs (e.g., emergence and recruitment) on density estimates relative to the mayfly‐density management goal. Two types of density patterns were observed: (1) densities were relatively high in spring and gradually decreased through late summer (observed in Lake Erie and Lake St. Clair in 1997 and Lake St. Clair in 1999) and (2) densities were relatively high in spring, gradually decreased to mid summer, abruptly decreased in mid summer, and then increased between summer and late fall (Lake Erie and Lake St. Clair in 1998 and Lake Erie in 1999). Length‐frequency distributions of nymphs and observations of adults indicate that the primary cause for the two density patterns was attributed to failed (first pattern) and successful (second pattern) reproduction and emergence of nymphs into adults in mid summer. Gradual declines in densities were attributed to mortality of nymphs. Our results indicate that caution should be used when evaluating progress of pollution‐abatement programs based on mayfly densities because recruitment success is variable both between and within years. Additionally, the interpretation of progress toward management goals, relative to the restoration of Hexagenia populations in the Great Lakes and possibly other water bodies throughout the world, is influenced by the number of years in which consequtive collections are made.     

Inter lake comparison of liver morphology and in vitro hepatic monodeiodination of L-thyroxine in sexually mature coho salmon, Oncorhynchus kisutch Walbaum, from Lakes Erie, Ontario, Michigan and Superior

The hepatosomatic index (HS1) of female sexually mature coho salmon, Oncorhynchus kisutch , from Lake Superior was significantly higher (P<0.01) than in males, whereas that of females from Lake Erie was significantly lower (P<0.05) than in males; there was no significant sex differences in coho salmon from Lakes Ontario or Michigan. Hepatic nuclear areas (HNA) were significantly higher ( P <0.01) in males compared with females in fish collected from Lakes Ontario and Erie, but there was no sex differences in HNA of coho salmon from Lakes Superior or Michigan. In all four lakes, hepatocyte cytoplasmic volume was significantly higher ( P <0.01) in males than in females from the same lake, and the cytoplasmic volume: nuclear volume ratio of males was corresponding significantly higher ( P < 0.05) than in females from the same lake.
Two hepatocytic cell types were evident, termed' light and dark cells, based on the electron density of their cytoplasmic matrix. There were considerable intersex and interlake differences in the relative populations of light 'and dark' cells in coho salmon from Lakes Ontario, Michigan, Erie and Superior, and also in the hepatocytic content of lipid, glycogen, mitochondria and ribosomal and smooth endoplasmic reticulum.
There were no sex differences with regard to in vitro hepatic monodeiodination of L-thyroxine (T4) to triiodo-L-thyronine (T3) in salmon from any of the lakes. However, T4 to T3 conversion was significantly lower (P < 0.05) in liver homogenates prepared from Lake Ontario coho salmon than in comparable preparations of liver from Lake Superior, Lake Erie, or Lake Michigan salmon.     

Rapid decomposition of fish bones in Lake Erie sediments

In an effort to explain the rarity of fish bones in the Great Lakes sediments, the degradation of ground fresh fish bones in microcosms containing Lake Erie sediments has been studied. The rapid build-up of phosphorus in the aqueous phase points to the great instability of the bone mineral in these sediments, while the actual analysis of the sediments shows that 10–50% of the added bone was degraded in three weeks. The decomposition rate was independent of the redox conditions of the microcosm, and was biologically mediated. Also, the incongruent dissolution of the bone apatite entailed the secondary formation of vivianite (ferrous phosphate) and other calcium and aluminocalcium phosphates. Calculations suggest that fish debris account for well over 10–20% of the P flux to the sediments in some nearshore areas. Since most of this P is quickly remineralized, the contribution of carrion to the differences in the quality of nearshore and offshore waters of the Lower Great Lakes must remain an intriguing question.     

Seasonal changes in thyroid hyperplasia, serum thyroid hormone and lipid concentrations, and pituitary gland structure in Lake Ontario coho salmon, Oncorhynchus kisutch Walbaum and a comparison with coho salmon from Lakes Michigan and Erie

A progressive fall in serum thyroid hormone levels was found in Lake Ontario coho salmon, Oncorhynchus kisutch , between May 1978 and January 1979 concomitant with an increase in goitre frequency and thyroid hyperplasia. Despite marked differences in overt goitre frequency in sexually mature adult salmon collected from Lakes Ontario (43.7%), Erie (93.5%), or Michigan (0%), serum thyroid hormone levels and thyroid histology were similar in fish from the three lakes. Two gonadotrop-like basophil cells ('globular'and'vacuolar') were found in the pituitary, particularly in sexually maturing and mature adults and'jacks'. Whereas in salmon from Lakes Ontario or Michigan, the globular cells were vacuolated in Lake Erie salmon they were not; this observation may be correlated with the absence of obvious secondary sexual characteristics in Lake Erie salmon. Serum free fatty acids serum, triglycerides and cholesterol concentrations in Lake Ontario salmon fell progressively from the condition in fish collected from the Lake in May 1978, to that of fish collected during their potamodrous migration in November 1978 and January 1979.     

Expansion of tubenose gobies <Emphasis Type="Italic">Proterorhinus semilunaris</Emphasis> into western Lake Erie and potential effects on native species

The Eurasian freshwater tubenose goby Proterorhinus semilunaris (formerly Proterorhinus marmoratus) invaded the Laurentian Great Lakes in the 1990s, presumably via ballast water from transoceanic cargo ships. Tubenose gobies spread throughout Lake St. Clair, its tributaries, and the Detroit River system, and also are present in the Duluth-Superior harbor of Lake Superior. Using seines and bottom trawls, we collected 113 tubenose gobies between July 2007 and August 2009 at several locations in western Lake Erie. The number and range of sizes of specimens collected suggest that that tubenose gobies have become established and self-sustaining in the western basin of Lake Erie. Tubenose gobies reached maximum densities in sheltered areas with abundant macrophyte growth, which also is their common habitat in native northern Black Sea populations. The diet of tubenose gobies was almost exclusively invertebrates, suggesting dietary overlap with other benthic fishes, such as darters (Etheostoma spp. and Percina sp.), madtoms (Noturus spp.), and sculpins (Cottus spp.). A single mitochondrial DNA haplotype was identified, which is the most common haplotype found in the original colonization area in the Lake St. Clair region, suggesting a founder effect. Tubenose gobies, like round gobies Neogobius melanostomus, have early life stages that drift owing to vertical migration, which probably allowed them to spread from areas of colonization. The Lake St. Clair-Lake Erie corridor appears to have served as an avenue for them to spread to the western basin of Lake Erie, and abundance of shallow macrophyte-rich habitats may be a key factor facilitating their further expansion within Lake Erie and the remainder of the Laurentian Great Lakes.     

Physical and chemical aspects of Chew Valley and Blagdon Lakes, two eutrophic reservoirs in North Somerset, England

Chew Valley and Blagdon Lakes are two shallow, hard-water, lowland eutrophic reservoirs, situated near Bristol in the south-west of England. Chew Lake is more turbid and richer in plankton but poorer in macrophytes than Blagdon, and is more exposed to wind action. Both lakes show evidence of transient stratification in the summer coupled to deoxygenation of the bottom water, which has led to release of nutrients from the sediments. Severe algal blooms in Chew Lake in 1968 and the consequent filtration difficulties led to the establishment of a collaborative research programme between the University of Bristol and the Bristol Waterworks Company, to define the present biological status of the lakes, and to predict their possible future development. The work covers a wide range of measurements and observations on the limnological conditions of the lakes, which form an elegantly contrasted pair, and this paper describes their general physical and chemical features.     

Recolonization and possible recovery of Burrowing Mayflies (Ephemeroptera: Ephemeridae: Hexagenia spp.) in Lake Erie of the Laurentian Great Lakes

Burrowing mayflies of the genus Hexagenia spp. were widely distributed (ca. 80% of sites) and abundant (ca. 160 nymphs/m²) in the western basin of Lake Erie of the Laurentian Great Lakes in 1929–1930, prior to a period of anoxia in the mid 1950s. Nymphs were absent or rare in the basin between 1961 and 1973–1975. In 1979–1991, nymphs were infrequently found (13–46% of sites) in low abundance (3–40 nymphs/m²) near shore (<7.5 km from shore), but were absent or rare offshore (0–7% of sites at 0–1 nymphs/m²). Increased abundance occurred offshore between 1991 (0% of sites) and 1993 (52% of sites at 7/m²). Annual sampling, beginning in 1995, indicates that nymphs increased in both nearshore and offshore waters. By 1997, nymphs were found throughout the lake (88% of sites) at a mean density 40-fold greater (392/m²) than that observed in 1993 (11/m²). In 1998, the distribution of nymphs remained the same as 1997 (88% of sites) but density declined 3-fold (392 to 134/m²). These data indicate that mayflies have recolonized sediments of western Lake Erie and that their abundance may be similar to levels observed before their disappearance in the mid 1950s. However, prior to the mid 1950s, densities were greater in offshore than nearshore waters, but between 1979 and 1998 greater densities occurred near shore than offshore. In addition, there were two areas in the 1990s where low densities consistently occurred. Therefore, recovery of nymphs in western Lake Erie may not have been complete in 1998. At present we do not know the cause for the sudden recolonization of nymphs in large portions of western Lake Erie. Undoubtedly, pollution-abatement programs contributed to improved conditions that would have ultimately led to mayfly recovery in the future. However, the explosive growth of the exotic zebra mussel, Dreissena polymorpha, undoubtedly diverted plankton foods to bottom substrates which could have increased the speed at which Hexagenia spp. nymphs recolonized sediments in western Lake Erie in the 1990s.     

Seasonal phosphorus release from exposed,re-inundated littoral sediments of two Australian reservoirs

Water levels in many reservoirs typically fluctuate seasonally, but the effects of re-inundation of exposed sediments on nutrient dynamics in the water column are poorly known. This study concerns the seasonal differences in the potential of sediments from two Australian reservoirs, after having undergone different degrees of in situ desiccation, to release P under aerobic conditions. Differences were determined between biotic and abiotic P release, and results were also examined in relation to sediment chemistry. The two reservoirs, Carcoar Dam and Lake Rowlands, demonstrated different patterns of P release involving an interactive complex of P release mechanisms. Sediment chemistry at the reservoir margins was important because of the higher concentrations of N, P, Fe and Mn in Lake Rowlands. Physical and chemical processes influenced P uptake and release due to desiccation and oxidation of sediments and were of greater importance in Carcoar Dam. Abiotic P release from sterilised sediments was greater than from unsterilised sediments where both biotic and abiotic processes were apparent. Biotic P uptake and release were especially marked in Lake Rowlands where large macrophyte beds provided a rich source of organic matter. Little seasonal difference in P release was detected. The increased P release from dried sediments has ramifications for internal P loading into reservoirs and for the calculation of P budgets. For managers of reservoirs where large expanses of sediment are exposed during drying, it may be better to maintain high water levels, where possible, during the summer by modifying drawdown practices.     

Microbiological examination of Lake Erie and Lake Ontario sediments

Diver collected cores from three sites in Lake Erie, west of Cleveland, Eastern basin and near Buffalo, and one from Lake Ontario near the mouth of the Niagara River, were sectioned to 20 cm and examined for sulfur cycle and nitrogen cycle bacteria, heterotrophic bacteria, insoluble organic and inorganic phosphate solubilizing bacteria and manganese oxidizing bacteria. Eh, pH, nitrogen, organic carbon and percentage moisture determinations were also made. Data from this study support and confirm other microbiological data collected from Lower Great Lakes sediment and also support the hypothesis that microbial flora of similar type sediments are numerically similar irrespective of the sediments source within the Lower Great Lakes.     

Clostridium botulinum type E in fish from the Great Lakes

Bott, Thomas L. (University of Wisconsin, Madison), Janet S. Deffner, Elizabeth McCoy, and E. M. Foster. Clostridium botulinum type E in fish from the Great Lakes. J. Bacteriol. 91:919-924. 1966.-The intestinal contents of more than 3,000 fish from Lakes Erie, Superior, Huron, and Michigan were examined for Clostridium botulinum type E. Demonstration of the organism was accomplished by identifying its toxin in liquid cultures inoculated with material from the alimentary tract. Incidence figures, expressed as per cent of the fish tested, were: Lake Erie, 1%; Lake Superior, 1%; Lake Huron, 4%; the main body of Lake Michigan, 9%; and Green Bay (on Lake Michigan), 57%. Thus, C. botulinum type E appears to be widely but unevenly distributed in the Great Lakes, and fish from all areas are potential carriers of it.     

Entrainment,deposition, and transport of fine-grained sediments in lakes

Recent work on the settling, diffusion, entrainment, and deposition of fine-grained sediments in fresh water is reviewed and synthesized. Particular attention is given to the dependence of these processes on sediment properties such as particle size. The application of this knowledge to the analysis and numerical modeling of sediment transport is also discussed. Much of the work is concerned with the Great Lakes and, more specifically, with the Western Basin of Lake Erie.     

A Comparison of the Benthic Bacterial Communities Within and Surrounding <Emphasis Type="Italic">Dreissena</Emphasis> Clusters in Lakes

The impact of Dreissena (Dreissena polymorpha and D. bugensis) on the benthic bacterial community in lakes is largely unknown. Therefore, we quantified differences in the structure and activity of bacterial communities living in sediments (1) associated with Dreissena clusters, and (2) unassociated with established clusters (lake bottom sediments). Dreissena clusters and sediments were collected from locations in Lake Erie, Lake Ontario, and several inland lakes. Denaturing gradient gel electrophoresis (DGGE) analysis of the benthic bacterial community showed that the bacterial populations selected for by Dreissena represent a subset of the bottom communities and are geographically distinct. Community-level physiological profiling (CLPP) showed that overall bacterial activity and metabolic diversity were enhanced by the presence of clusters in all samples, with the exception of those harvested from the two Lake Erie sites. Therefore, Dreissena appears to affect both structure and metabolic function of the benthic bacterial community and may have yet unexplored ecosystem and food web consequences.     

The diet of Herring Gulls (Larus argentatus) during winter and early spring on the lower Great Lakes

In the Great Lakes, the Herring Gull (Larus argentatus) is a prominent member of the aquatic bird community, and has been used to monitor spatial and temporal trends in contaminant levels. To understand more fully contaminant loading outside the breeding season, we analysed the contents of 1298 freshly regurgitated pellets and 179 fresh faeces, collected in March and early April 1978–83, and between late December and late February 1990–91, from the vicinity of breeding colonies in Lakes Ontario and Erie, the Niagara River, Detroit River, and south-eastern parts of Lake Huron. Most adult Herring Gulls from the Great Lakes population winter in these areas, but there is no published account of their food habits other than during the breeding season. Most pellets from colonies close to large urban centres contained remains of garbage, as well as various fish species. Small mammals, notably Deer Mice (Peromyscus maniculatus) dominated the early spring diet at Lake Huron colonies near agricultural areas. At all other sites fish predominated in pellets and faeces, but garbage items were also recorded regularly. The species of fish consumed varied regionally, probably reflecting local availability. In Lake Ontario, Rainbow Smelt (Osmerus mordax) and Alewife (Alosa pseudoharengus) occurred most frequently in samples, whereas Freshwater Drum (Aplodinotus grunniens) was the main fish prey in Lake Erie and the Detroit River. Dietary differences were apparent between years, within seasons, and amongst areas. While these may have reflected some real differences in food availability, interpretation of these results was confounded by various biases inherent in the sampling of pellets and faeces to determine diet in such an opportunistic species. Therefore, it would be unwise to draw rigid conclusions as to regional or seasonal differences in the diets of piscivorous birds, based upon analyses of diet from only a small sample of sites or years. Herring Gulls appear to feed mainly on fish and garbage in winter and early spring on the lower Great Lakes (much as during the breeding season), but any locally abundant food source is probably exploited opportunistically.     

Does the seston of Lake Biwa release dissolved inorganic nitrogen and phosphorus during aerobic decomposition?: Its implication for eutrophication

Seston was collected from depths of 5 and 60 m in the north basin and a depth of 0 m in the south basin of Lake Biwa in the summer of 1985 and decomposed in the laboratory under aerobic conditions for three months. There was no net release of dissolved inorganic phosphorus from any seston, in contrast with the liberation of dissolved inorganic nitrogen. From this result and other available data, it is suggested that almost all phosphorus entering Lake Biwa and remaining within it is finally transformed into particulate phosphorous, transported to the bottom sediments, and fixed there without being recycled. Thus, this mechanism seems to play an important role in the prevention of rapid eutrophication of Lake Biwa, in spite of high external phosphorus loading.     

The diversity and distribution of toxigenic Microcystis spp. in present day and archived pelagic and sediment samples from Lake Erie

The reoccurrence of significant cyanobacterial blooms in Lake Erie during the last 13 years has raised questions concerning the long-term persistence of microcystin-producing cyanobacteria and the presence of natural sediment reservoirs for potentially toxic cyanobacteria in this large lake system. To address these questions, we analyzed phytoplankton and sediment samples which were collected and preserved in the 1970s as well as samples collected in 2004 from locations within Lake Erie. The identification of microcystin-producing cyanobacteria in Lake Erie was examined via PCR amplification of the mcyA gene fragment. Based on the high % sequence similarity, the mcyA sequences from all 1970s phytoplankton and sediment samples were determined to belong to Microcystis spp., in spite of reports suggesting that Lake Erie was dominated by filamentous cyanobacteria in the 1970s. In sediment samples from 2004, signature genes for Microcystis were distributed and preserved not only in the surface sediments but also up to 10–12 cm in depth. Based on cell quantities determined by a quantitative polymerase chain reaction (qPCR) method, 0.18% of eubacteria in the sediments were Microcystis cells, of which 4.8% were potential microcystin producers. In combination with experiments showing that Microcystis cells can be cultured from Lake Erie surface sediments, this paper demonstrates the potential for these sediments to act as a reservoir for pelagic Microcystis populations and that the composition of the population of microcystin-producing cyanobacteria in Lake Erie has not changed remarkably since the 1970s.     

Spatial patterns of seston concentration and biochemical composition between nearshore and offshore waters of a Great Lake

1. The concentration and composition of seston were measured in the east basin of Lake Erie (U.S.A.–Canada) to determine whether the classical patterns of nearshore versus offshore zonation considered typical of large lakes have been altered by decades of change in nutrient loading and food web structure, and to test the possibility that food quality for seston consumers, as reflected in nutrient and lipid composition, may currently be diminished. Chlorophyll‐a (chl‐a), particulate organic carbon (POC), particulate P, total lipid (TL), lipid classes, fatty acids and major phytoplankton groups were compared between the nearshore (<20 m) and offshore zones in spring and early summer. 2. Particulate organic carbon, chl‐a and TL concentrations were lower nearshore than offshore, which is a reversal of the classical large lake pattern but consistent with other evidence from the Great Lakes that colonization by filter‐feeding dreissenid mussels can cause seston depletion in relatively shallow waters. 3. Terrestrial and bacterial fatty acid markers were slightly higher in the nearshore than the offshore, but there was little difference in nutrient, taxonomic or biochemical composition between zones otherwise. This shows a small differential influence of terrestrial and detrital inputs, and a slight shift away from phytoplankton dominance of seston composition in the nearshore, but little difference in potential food quality of seston. 4. Microscope counts, phytoplankton fluorescence, and fatty acid composition indicated succession from diatom dominance in May to dominance by cryptophyte and chromophyte flagellates in June and July. Depletion of dissolved P and Si, increased contribution of storage lipids, and changes in fatty acid composition suggested a mild degree of nutrient deficiency during this spring to summer transition. 5. Total lipids were dominated by classes typical of pigments and membranes with only moderate amounts of neutral (storage) lipids, polyunsaturated fatty acids (PUFA) were abundant (especially the long chain ω‐3 acids) and the POC : chl‐a and POC : particulate P ratios indicated P sufficiency or slight P‐deficiency. Despite concerns that some important consumers in the Great Lakes food web may be suffering from diminished food quality, these results point to a generally high seston food quality even with highly abundant mussels and incipient P deficiency in the east basin of Lake Erie.