Comparing life expectancy of three deer species between captive and wild populations

Life in zoological gardens provides a number of benefits to captive animals, resulting in an artificial reduction of the “struggle for life” compared to their free-ranging counterparts. These advantages should result in a higher chance of surviving from 1 year to the next, and thus in longer average life expectancies for captive animals, given that the biological requirements of the species are adequately met. Here, we compare the life expectancy of captive and free-ranging populations of three deer species (reindeer Rangifer tarandus, red deer Cervus elaphus, and roe deer Capreolus capreolus). Whereas captive reindeer and red deer had life expectancies equal to or longer than free-ranging individuals, the life expectancy of captive roe deer was shorter than that of free-ranging animals. These results support the impression that roe deer are difficult to keep in zoos, whereas reindeer and red deer perform well under human care. We suggest that the mean life expectancy of captive populations relative to that of corresponding free-ranging populations is a reliable indicator to evaluate the husbandry success of a species in captivity.     

Ecological traps in isodars: effects of tallgrass prairie management on bird nest success

Ecological traps occur when habitat selection and habitat suitability (measured in terms of fitness) are decoupled. We developed a graphical model based on isodar theory to distinguish between an ideal distribution and an ecological trap. We tested the model's predictions using data on breeding bird populations in managed tallgrass prairie in Oklahoma. Between 1992 and 1996 we monitored success for 2600 nests of 26 breeding species in undisturbed, grazed, and burned and grazed plots. We also sampled arthropod biomass and nest predator abundance. Using the isodar model we determined that managed plots are ecological traps: compared with success on plots left undisturbed, nest success on plots that were only grazed was lower, and success on plots that were burned and grazed was substantially lower. Yet birds preferred to nest on managed plots, where arthropod abundance was measurably higher. Reptiles were the most abundant taxon of nest predators, and their abundance was highest in managed plots. Consequently, tree-nesting species had higher nest success than shrub- and ground-nesting birds. Nest success also increased with tree height. We concluded that isodar theory is a useful tool for detecting ecological traps if any component of fitness is measured in addition to animal densities. Our study also suggests that (1) human modification of the environment may alter simultaneously food and predator abundance, (2) the former affects nest site selection and the latter nest success, and (3) such ecosystems are likely to become traps for breeding birds.     

One phase of the dormancy developmental pathway is critical for the evolution of insect seasonality

Evolutionary change in the timing of dormancy enables animals and plants to adapt to changing seasonal environments and can result in ecological speciation. Despite its clear biological importance, the mechanisms underlying the evolution of dormancy timing in animals remain poorly understood because of a lack of anatomical landmarks to discern which phase of dormancy an individual is experiencing. Taking advantage of the nearly universal characteristic of metabolic suppression during insect dormancy (diapause), we use patterns of respiratory metabolism to document physiological landmarks of dormancy and test which of the distinct phases of the dormancy developmental pathway contribute to a month‐long shift in diapause timing between a pair of incipient moth species. Here, we show that divergence in life cycle between the earlier‐emerging E‐strain and the later‐emerging Z‐strain of European corn borer (ECB) is clearly explained by a delay in the timing of the developmental transition from the diapause maintenance phase to the termination phase. Along with recent findings indicating that life‐cycle differences between ECB strains stem from allelic variation at a single sex‐linked locus, our results demonstrate how dramatic shifts in animal seasonality can result from simple developmental and genetic changes. Although characterizing the multiple phases of the diapause developmental programme in other locally adapted populations and species will undoubtedly yield surprises about the nature of animal dormancy, results in the ECB moth suggest that focusing on genetic variation in the timing of the dormancy termination phase may help explain how (or whether) organisms rapidly respond to global climate change, expand their ranges after accidental or managed introductions, undergo seasonal adaptation, or evolve into distinct species through allochronic isolation.     

Animal behaviour shapes the ecological effects of ocean acidification and warming: moving from individual to community‐level responses

Biological communities are shaped by complex interactions between organisms and their environment as well as interactions with other species. Humans are rapidly changing the marine environment through increasing greenhouse gas emissions, resulting in ocean warming and acidification. The first response by animals to environmental change is predominantly through modification of their behaviour, which in turn affects species interactions and ecological processes. Yet, many climate change studies ignore animal behaviour. Furthermore, our current knowledge of how global change alters animal behaviour is mostly restricted to single species, life phases and stressors, leading to an incomplete view of how coinciding climate stressors can affect the ecological interactions that structure biological communities. Here, we first review studies on the effects of warming and acidification on the behaviour of marine animals. We demonstrate how pervasive the effects of global change are on a wide range of critical behaviours that determine the persistence of species and their success in ecological communities. We then evaluate several approaches to studying the ecological effects of warming and acidification, and identify knowledge gaps that need to be filled, to better understand how global change will affect marine populations and communities through altered animal behaviours. Our review provides a synthesis of the far‐reaching consequences that behavioural changes could have for marine ecosystems in a rapidly changing environment. Without considering the pervasive effects of climate change on animal behaviour we will limit our ability to forecast the impacts of ocean change and provide insights that can aid management strategies.     

山地-绿洲“共轭型”生态牧场理念源起、概念框架与发展模式——以祁连山牧区为例

区域协调发展空间布局及耦合效应是国土空间治理现代化、区域生态保护和高质量发展绕不开的重要命题。本研究利用146户牧户访谈和21次管理部门调研资料,结合卫星遥感数据和文献资料,从“三生”(生产、生活、生态)视角爬梳祁连山草地畜牧业、河西走廊饲草种植业、牧户生计路径策略的历史源起和发展历程。在生态系统服务流理论指导下深入刻画了祁连山与河西走廊农牧耦合系统的空间联系,诠释了祁连山-河西走廊“共轭型”生态牧场概念框架与发展模式。研究认为：(1)2011年“草原生态奖补政策”实施以来祁连山地区植被覆盖度增加显著(P<0.05);传统牧业户、生态移民户的生计多样化指数分别是2.22和2.69,生计能力脆弱;外购草料、舍饲养殖、人工种草、异地借牧(秸秆补饲)、流转草原等是牧户落实草畜动态平衡的基础性生计策略,实现了祁连山草地畜牧业由超载过牧到“超载不过牧”的跨越式转型;(2)祁连山山地系统将生态系统服务(淡水资源供给)外溢至河西走廊绿洲系统以支撑饲草种植业发展,河西走廊饲草种植业提供优质饲草“反哺”祁连山草地畜牧业发展,二者构成了山地-绿洲“共轭空间”;借助外界物质能量输入路径的“虚拟草场”模...     

Successful city dwellers: a comparative study of the ecological characteristics of urban birds in the Western Palearctic

Numerous species have adapted to the proximity of humans, and this feature is no clearer than among species that have invaded towns and cities. The characteristics of species that have successfully managed to expand their range into urban areas remain largely unexplored, although they are of general interest in a world that is increasingly urbanised. I hypothesised that widely distributed species with high dispersal abilities, species with a high rate of innovation, a high level of risk-taking, and a fast life history would have a selective advantage in habitats influenced by humans. Consistent with this hypothesis, in a comparative analysis of 39 independent evolutionary events of urbanisation of birds in the Western Palearctic (thus taking the fact that closely related species that have become urbanised are caused by common phylogenetic descent rather than convergent evolution), bird species that adapted to urban habitats were characterised by large breeding ranges, high propensity for dispersal, high rates of feeding innovation (novel ways of acquiring food), short flight distances when approached by a human, and a life history characterised by high annual fecundity and high adult survival rate. Urban species may be disproportionately resistant to parasitism and predation because they had disproportionately strong immune responses, as reflected by the size of the bursa of Fabricius, and a history of weak predation-mediated natural selection, as reflected by the force required to remove feathers from the rump. Urban species had high overall ecological success as indicated by large range size and population size and high population density. This suggests that a suite of ecological features providing them with general ecological success characterises species of birds that have successfully invaded urban environments. Electronic supplementary material  The online version of this article (doi:) contains supplementary material, which is available to authorized users.     

萼花臂尾轮虫种复合体内三个姐妹种生活史特征的比较研究

应用生命表统计学方法,在13℃、18℃、23℃和28℃下对采自芜湖市莲塘湖和荷花塘水体中的萼花臂尾轮虫三个姐妹种HE1、HE3和LE9的生活史特征进行了比较研究。结果表明,三个姐妹种生命表参数间的差异因温度的不同而异。13℃下,姐妹种LE9的生命期望、平均寿命和世代时间都显著长于姐妹种HE3,LE9的净生殖率和种群内禀增长率均最大,三个姐妹种所产后代中的混交雌体百分率无显著的差异。18℃下,姐妹种LE9的生命期望和平均寿命显著长于姐妹种HE3,姐妹种LE9的世代时间显著长于姐妹种HE1和HE3,姐妹种 HE3的种群内禀增长率显著高于姐妹种LE9,姐妹种HE3所产后代中的混交雌体百分率最高,三个姐妹种的净生殖率无显著的差异。23℃下,姐妹种HE1的生命期望、平均寿命和世代时间均最长,姐妹种HE1所产后代中的混交雌体百分率显著低于HE3,三个姐妹种的净生殖率和种群内禀增长率均无显著的差异。28℃下,三个姐妹种的生命期望、平均寿命、世代时间和种群内禀增长率均无显著的差异;姐妹种HE1的净生殖率最低;姐妹种HE3所产后代中的混交雌体百分率最高。三个姐妹种的生命表参数对升高的温度的响应也不相同。温度、姐妹种及两者间的交互作用对轮虫的世代时间、平均寿命、出生时的生命期望和轮虫所产后代中的混交雌体百分率均有显著的影响;温度和姐妹种对轮虫的净生殖率和种群内禀增长率均有极显著影响,但两者的交互作用对其无显著性影响。     

晋陕宁黄土丘陵区生态修复与农林牧业持续发展仿真研究

晋陕宁黄土丘陵区土壤侵蚀严重,生态环境脆弱,不合理利用土地是其主要原因,生态修复与环境重建是该区生态与经济持续发展的重要战略措施。应用系统动力学（System Dynamic,简称SD）和“反馈控制（Feedback control）理论建立了该区生态修复和环境重建的SD模型,它分为人口、农业、林业、牧业、农村经济、土壤侵蚀和生态环境6个模块,仿真时间1990～2080年,步长1a。经检验该SD模型的有效性为93．5％,可用于未来仿真预测。根据该区的生态环境特点和农牧业发展现状,选择生态环境恢复重建的3种典型模式——同步发展模式（A模式）、逐步调整模式（B模式）和现状发展模式（C模式）进行仿真研究,预测3种模式2000～2080年的土壤侵蚀、土地利用的发展动态以及农林牧业和生态环境演化趋势。仿真结果表明：土地利用与农、林、牧业持续发展密切相关,坡耕地和草场退化是制约农林牧业发展的主要因素。合理调整土地利用结构和加速治理侵蚀,可促进生态环境逐步恢复和农林牧业持续发展。同步发展模式（A模式）是该区生态修复和环境重建的3个仿真模式中的最优策略,它可促进农林牧协调发展和生态一经济趋向良性循环,并提出该区生态修复与环境重建的对策措施。该SD模型结构合理,运行功能良好,能较真实的模拟具有多变量、非线性变量的复杂生态系统的动态行为,为生态修复研究提供一种有效工具。     

Niche differentiation among clones in asexual grass thrips

Many asexual animal populations comprise a mixture of genetically different lineages, but to what degree this genetic diversity leads to ecological differences remains often unknown. Here, we test whether genetically different clonal lineages of Aptinothrips grass thrips differ in performance on a range of plants used as hosts in natural populations. We find a clear clone‐by‐plant species interactive effect on reproductive output, meaning that clonal lineages perform differently on different plant species and thus are characterized by disparate ecological niches. This implies that local clonal diversities can be driven and maintained by frequency‐dependent selection and that resource heterogeneity can generate diverse clone assemblies.     

Arts and Ageing; Life Expectancy of Historical Artists in the Low Countries

Practising arts has been linked to lowering stress, anxiety and blood pressure. These mechanisms are all known to affect the ageing process. Therefore, we examine the relation between long-term involvement in arts and life expectancy at age 50 (LE50), in a cohort of 12,159 male acoustic, literary and visual artists, who were born between 1700 and 1899 in the Low Countries. We compared the life expectancy at age 50 of the various artists with the elite and middle class of that time. In the birth cohorts before 1850, acoustic (LE50:14.5–19.5) and literary artists (LE50:17.8–20.8) had a similar life expectancy at age 50 compared to the elite (LE50:18.0–19.0). Only visual artists (LE50:15.5–17.1) had a lower life expectancy at age 50 compared to the elite at that time. For the most recent birth cohorts from 1850 through 1899, the comparison between artists and the elite reversed and acoustic and literary artist had a lower life expectancy at age 50, while visual artists enjoyed a similar life expectancy at age 50. Although artists belonged to the middle socioeconomic class and lived predominantly in urban areas with poor living conditions, they had a life expectancy similar to the elite population. This is in line with observed favourable effects of practicing arts on health in the short-term. From our historical analysis, we hypothesize several mechanisms through which artistic creativity could influence the ageing process and life expectancy. These hypotheses, however, should be formally tested before any definite conclusions on effects of arts on ageing can be drawn.     

基于生态供给-消耗平衡关系的中尼廊道地区生态承载力研究

中尼廊道地区作为南亚通道建设的关键环节,具有生态环境脆弱且对生态资源依赖性强的基本特征,中尼廊道建设占用生态空间,将增加生态系统对农牧业生产活动的承载压力;因此,开展中尼廊道生态承载力研究对青藏高原生态保护和南亚通道建设具有重要的实践价值和指导意义。本文基于生态供给与消耗平衡关系,通过计算农牧业生产对生态系统净初级生产力的消耗,评估中尼廊道地区的生态承载力,结果表明：（1）中尼廊道地区生态承载力处于富富有余状态,2015年有7个县域生态承载力处于临界超载或平衡有余状态;整体上生态系统尚有较大的生态空间来支撑中尼廊道建设,但建设可能給局部县域带来超载风险。（2）中尼廊道地区生态系统供给量处于稳定波动状态,畜牧业生态消耗在生态消耗中占主导地位（占比超80%）;得益于2005年起实施的草畜平衡政策,中尼廊道地区及其24个县域生态消耗量呈下降趋势,农牧业生产活动对生态系统造成的压力降低,生态承载状态向优发展;但地处粮食主产区、口岸区、城市化辐射区的7个县域,在本地及周边地区日益增长的对农牧业产品的生活需求驱动下生态消耗量处于增加态势。（3）若以实现生物多样性公约所倡导的50%生态资源得到保护为生态保护目标,目前中尼廊道农牧业生产模式产生的生态消耗将超出其可利用供给,区域可持续发展需要关注如何通过中尼廊道建设带动当地产业结构调整以缓解农牧业生产对生态系统的压力。     

Coalescence 2.0: a multiple branching of recent theoretical developments and their applications

Population genetics theory has laid the foundations for genomic analyses including the recent burst in genome scans for selection and statistical inference of past demographic events in many prokaryote, animal and plant species. Identifying SNPs under natural selection and underpinning species adaptation relies on disentangling the respective contribution of random processes (mutation, drift, migration) from that of selection on nucleotide variability. Most theory and statistical tests have been developed using the Kingman coalescent theory based on the Wright‐Fisher population model. However, these theoretical models rely on biological and life history assumptions which may be violated in many prokaryote, fungal, animal or plant species. Recent theoretical developments of the so‐called multiple merger coalescent models are reviewed here (Λ‐coalescent, beta‐coalescent, Bolthausen‐Sznitman, Ξ‐coalescent). We explain how these new models take into account various pervasive ecological and biological characteristics, life history traits or life cycles which were not accounted in previous theories such as (i) the skew in offspring production typical of marine species, (ii) fast adapting microparasites (virus, bacteria and fungi) exhibiting large variation in population sizes during epidemics, (iii) the peculiar life cycles of fungi and bacteria alternating sexual and asexual cycles and (iv) the high rates of extinction‐recolonization in spatially structured populations. We finally discuss the relevance of multiple merger models for the detection of SNPs under selection in these species, for population genomics of very large sample size and advocate to potentially examine the conclusion of previous population genetics studies.     

Bigger teeth for longer life? Longevity and molar height in two roe deer populations

The role of tooth wear as a proximate cause of senescence in ruminants has recently been highlighted. There are two competing hypotheses to explain variation in tooth height and wear; the diet-quality hypothesis predicting increased wear in low-quality habitats, and the life-history hypothesis predicting molar height to be related to expected longevity. We compared tooth height and wear from roe deer of known age from two contrasting populations of roe deer (Capreolus capreolus) in France: Trois Fontaines (TF) with good habitat and shorter animal life expectancy and Chizé (CH) with poor habitat and longer animal life expectancy. There was no population difference in tooth wear, leading to rejection of the diet-quality hypothesis. However, despite their smaller body size, initial molar height for animals from CH was larger than for animals from TF. This provides the first evidence that variation in longevity between populations can lead to differences in molar height within a species.     

中国古代在认识和保护生物多样性方面的贡献

中国古代的先人们经过长期劳动实践和调查研究,很早就对生物物种、生态环境及遗传的多样性有了较多认识,并记述在浩如烟海的典籍中。他们还通过发展农牧业、合理利用和管理生物资源以及建立各种形式的保护地和园林等,为保护生物多样性作出了巨大贡献。     

Soil Heterogeneity Effects on Tallgrass Prairie Community Heterogeneity: An Application of Ecological Theory to Restoration Ecology

Spatial heterogeneity of resources can influence plant community composition and diversity in natural communities. We manipulated soil depth (two levels) and nutrient availability (three levels) to create four heterogeneity treatments (no heterogeneity, depth heterogeneity, nutrient heterogeneity, and depth + nutrient heterogeneity) replicated in an agricultural field seeded to native prairie species. Our objective was to determine whether resource heterogeneity influences species diversity and the trajectory of community development during grassland restoration. The treatments significantly increased heterogeneity of available inorganic nitrogen (N), soil water content, and light penetration. Plant diversity was indirectly related to resource heterogeneity through positive relationships with variability in productivity and cover established by the belowground manipulations. Diversity was inversely correlated with the average cover of the dominant grass, Switchgrass (Panicum virgatum), which increased over time in all heterogeneity treatments and resulted in community convergence among the heterogeneity treatments over time. The success of this cultivar across the wide range of resource availability was attributed to net photosynthesis rates equivalent to or higher than those of the native prairie plants in the presence of lower foliar N content. Our results suggest that resource heterogeneity alone may not increase diversity in restorations where a dominant species can successfully establish across the range of resource availability. This is consistent with theory regarding the role of ecological filters on community assembly in that the establishment of one species best adapted for the physical and biological conditions can play an inordinately important role in determining community structure.     

Reed Canary Grass (Phalaris arundinacea) as a Biological Model in the Study of Plant Invasions

Invasive species pose a serious threat to native plant communities and are an important contributor to loss of biodiversity. In the case of Phalaris arundinacea, L. (Poaceae), reed canary grass, a cool-season, long-lived perennial plant native to Eurasia and North America, nonnative agronomically important genotypes were introduced to North America for numerous uses such as forage and soil stabilization. Following repeated introductions, reed canary grass became an aggressive invader that takes over natural wet prairies, stream-banks and wetlands. Reed canary grass can outcompete native plant species, resulting in monospecific stands with concomitant loss of plant and insect diversity and ultimately to alteration in ecosystem function. Abiotic factors such as disturbance, changes in hydrological regime, and particularly nutrient runoff to wetlands can enhance reed canary grass establishment and vegetative spread. In addition, the species' capacity for early season growth, rapid vegetative spread, high stem elongation potential, wide physiological tolerance, and high architectural plasticity make the species highly aggressive under a wide range of ecological conditions. The change in life-history and environmental conditions responsible for the enhanced aggressiveness observed between native and invasive genotypes are not yet understood. Hence, reed canary grass provides an ideal study system to test a number of ecological and genetic hypotheses to explain why some plant species become extremely aggressive when transported into a new geographical area. To date, genetic studies have found that invasive populations have high genetic diversity and that genotypes differ in their phenotypic plasticity and response to ecological conditions, which may contribute to their invasion success. Finally comparative studies currently underway on European native and American invasive genotypes of reed canary grass should shed light on the mechanisms responsible for reed canary grass's aggressiveness and should provide an experimental protocol to test ecological and genetic hypotheses about what makes a species invasive.     

Anti-inflammatory effect of roasted licorice extracts on lipopolysaccharide-induced inflammatory responses in murine macrophages

Licorice, the roots of Glycyrrhiza inflata, is used by practitioners of alternative medicine to treat individuals with gastric or duodenal ulcers, bronchitis, cough, arthritis, adrenal insufficiency, and allergies. We investigated the anti-inflammatory properties of 4 licorice extracts: extracts of roasted licorice obtained by ethanol (rLE) or water extraction (rLW) and extracts of raw licorice obtained by ethanol (LE) or water extraction (LW). rLE demonstrated strong anti-inflammatory activity through its ability to reduce nitric oxide and prostaglandin E(2) production in the LPS-stimulated mouse macrophage cell, RAW264.7. It also inhibited the production of pro-inflammatory cytokines and CD14 expression on the LPS-stimulated RAW264.7 cells. Further study indicated that LPS-induced degradation and phosphorylation of Ikappa-Balpha, along with DNA-binding of NF-kappaB, was significantly inhibited by rLE exposure in RAW264.7 cells. In the murine model, we found that in vivo exposure to rLE-induced an increase in the survival rate, reduced plasma levels of TNF-alpha and IL-6, and increased IL-10 production in LPS-treated mice. Collectively, these data suggest that the use of rLE may be a useful therapeutic approach to various inflammatory diseases.     

论华北农牧交错带生态与经济建设的策略与途径

华北农牧交错带自成型农作至今的百余年内,农牧业长期封闭、耗竭式生产,导致土地资源呈现沙化、碱化与贫瘠化演替,生态退化直接威胁着京、津及华北地区的生态安全,发挥市场经济下区域间互补性合作生产优势,组织农牧产品有效交流,建立开放式农牧生产结构。成为促进华北农牧交错带生态环境与社会经济互依发展的重要策略,基于不同效益主体的建设目标差异性及生态与经济演进态势的矛盾性,提出了华北农牧交错带生态一经济建设的技术途径,通过乔灌围网、草地培育,实现立体与平面相结合的土地生态防护体系;通过集约生产喜凉蔬菜、组织实施南秸北饲,发展区域特色优势产业,实现农业经济的突破。     

High host density favors greater virulence: a model of parasite–host dynamics based on multi-type branching processes

We use a multitype continuous time Markov branching process model to describe the dynamics of the spread of parasites of two types that can mutate into each other in a common host population. While most mathematical models for the virulence of infectious diseases focus on the interplay between the dynamics of host populations and the optimal characteristics for the success of the pathogen, our model focuses on how pathogen characteristics may change at the start of an epidemic, before the density of susceptible hosts decline. We envisage animal husbandry situations where hosts are at very high density and epidemics are curtailed before host densities are much reduced. The use of three pathogen characteristics: lethality, transmissibility and mutability allows us to investigate the interplay of these in relation to host density. We provide some numerical illustrations and discuss the effects of the size of the enclosure containing the host population on the encounter rate in our model that plays the key role in determining what pathogen type will eventually prevail. We also present a multistage extension of the model to situations where there are several populations and parasites can be transmitted from one of them to another. We conclude that animal husbandry situations with high stock densities will lead to very rapid increases in virulence, where virulent strains are either more transmissible or favoured by mutation. Further the process is affected by the nature of the farm enclosures.