Sex-related growth and secondary compounds in Juniperus oxycedrus macrocarpa

Gender-related differences in growth and concentration of secondary metabolites have been documented in dioecious plants. Males usually grow faster than females, whilst females allocate more resources to reproduction and chemical defences than males, hence their growth is reduced. This hypothesis was tested on prickly juniper (Juniperus oxycedrus macrocarpa), a Mediterranean evergreen tree. The results showed that males grew faster than females but also had higher concentrations of both phenolics and terpenoids. However, neither phenolic nor terpenoid concentrations were correlated with growth in either sex, nor with a “reproductive effort” index in female trees. No browsing occurred on any of the trees sampled. Contrary to predictions, this study suggests that allocation of resources to reproduction in plants may reduce the resources available to both growth and secondary compounds. This might be particularly pronounced in plants with “expensive” fruits, such as prickly juniper, characterised by relatively large, long-lived fruits.     

The importance of diurnal and nocturnal activity and interspecific interactions for space use by ants in clear‐cuts

1. Full sunlight conditions in open clear‐cuts may limit the activity of ants as soil surface temperatures reach lethal levels. Therefore, differences may be expected between the diurnal and nocturnal activity of ants, and in the interactions between ant species. These predictions, however, have been poorly investigated so far. 2. The circadian activity of ants in clear‐cuts in managed forests in Poland was investigated. Repeated counts of ants were performed during the day and the following night at the clear‐cut edge and in the clear‐cut interior. Interspecific interactions and the effect of plant coverage were also considered. 3. Abundances of Formica fusca Linnaeus and red wood ants were higher during the day, whereas Myrmica were more common at night. Formica fusca, Lasius and red wood ants were more common at the clear‐cut edge than in the interior. Myrmica showed the opposite pattern, but at night, its numbers increased at the edge. Plant coverage positively affected F. fusca and red wood ants. 4. Red wood ants tended to be negatively associated with Lasius, whereas they were neutral for F. fusca. The negative association of red wood ants and Myrmica was stronger during the day compared to night. 5. The time of day was a strong driver of ant activity in the clear‐cuts, whereas the distribution of red wood ants was of lesser importance. It is concluded that circadian activity may substantially contribute to niche separation between coexisting species, therefore, studies performed exclusively during the day cannot reflect the real structure of the community.     

Sexual and individual morphometric variation in Libycosaurus (Mammalia, Anthracotheriidae) from the Maghreb and Libya

Anthracotheres of late Middle Miocene and Late Miocene age have been described from several localities in northern Africa, all of them currently assigned to the genus Libycosaurus Bonarelli, although in several previous works they were assigned to Merycopotamus Falconer and Cautley, a considerably younger and specialised form from the Indian subcontinent which has quite different dental and cranial morphology. Three species of Libycosaurus have been named, but there has been some doubt about the morphometric variation within the various species, with some authors such as Gaziry (1987) placing the fossils from Sahabi (Latest Miocene, Libya) and Beglia (end Middle Miocene to basal Late Miocene, Tunisia) into the same species despite marked size differences, and others (Ducrocq et al., 2001) creating a species for a restricted sample of small specimens from Nementcha (Late Middle Miocene, Algeria), but which overlaps with the range of size variation of Beglia fossils. The aim of this paper is to examine the available samples in greater depth in order to understand the morphometric variation in these anthracotheres. It is confirmed that the Beglia sample is quite variable (Black, 1972), both morphologically and metrically, but it is concluded that it nevertheless belongs to a single species, because specimens from some of the localities within the Beglia Formation (e.g. Loc. 17 in the lower levels at Beglia) span the entire range of variation (Pickford, 1994). The sample from Nementcha cannot be distinguished from the Beglia sample on any consistent metric or morphological basis, but in general the specimens fall at the low end of the range of variation of the Beglia sample. It is thus likely that L. algeriensis is a synonym of L. anisae. The Sahabi and Chad samples (L. petrocchii), in contrast, fall above the known range of variation of the Beglia material in almost all metric features, but are close to it morphologically, and they are considered to represent a species distinct from the Beglia sample.     

Stability of the spatio-temporal distribution and niche overlap in neotropical earthworm assemblages

The spatial distribution of soil invertebrates is aggregated with high-density patches alternating with low-density zones. A high degree of spatio-temporal organization generally exists with identified patches of specific species assemblages, in which species coexist according to assembly rules related to competitive mechanisms for spatial and trophic resources occur. However, these issues have seldom been addressed. The spatio-temporal structure of a native earthworm community in a natural savanna and a grass–legume pasture in the Colombian “Llanos” was studied during a 2-year-period. A spatially explicit sampling design (regular grid) was used to discern the distribution pattern of species assemblages in both systems. Earthworms were collected from small soil pits at three different sampling dates. Data collected from 1 m² soil monoliths were also used in the present study. Data were analyzed with the partial triadic analysis (PTA) and correlograms, while niche overlap was computed with the Pianka index. The PTA and correlogram analysis revealed that earthworm communities displayed a similar stable spatial structure in both systems during the 2-year study period. An alternation of population patches where different species' assemblages dominated was common to all sampling dates. The medium-sized Andiodrilus sp. and Glossodrilus sp. exhibited a clear spatial opposition in natural savanna and the grass–legume pasture for the duration of the study. The Pianka index showed a high degree of niche overlapping in several dimensions (vertical distribution, seasonality of population density) between both species. The inclusion of space-time data analysis tools as the PTA and the use of classical ecological indices (Pianka) in soil ecology studies may improve our knowledge of earthworm assemblages' dynamics.     

Foraminiferal assemblages and the confinement index as tools for assessment of saline intrusion and human impact in the Mekong Delta and neighbouring areas (Vietnam)

Foraminiferal assemblages have been studied in 33 samples from the Can Gio region to the north of the Mekong Delta and from two regions of the Delta: the Tra Vinh province, in the middle part of the Delta; and the Ca Mau peninsula, to the south. Two plates, including 117 pictures, illustrate the species. These assemblages, either through the nature of the test or through the calculation of the confinement index Ic, clearly indicate differences in the balance between continental and marine influences, the Tra Vinh province being subject to the strongest freshwater influence. The decrease of calcareous specimens and the increase of Ic indicate the impact of deforestation in the Ca Mau peninsula, the influence of organic matter in shrimp ponds, and the impact of pollution in a tidal channel. The distribution of foraminiferal assemblages described in this study should be used as part of a reference point for further observations with a view to assessing environmental impacts of increasing human activities and/or global change.     

Breeding system and pollen limitation in the masting tree Sorbus aucuparia L. (Rosaceae) in the NW Iberian Peninsula

Mast seeding or masting is the supra-annual periodic production of a large number of seeds by long-lived plants. It has been suggested that this may be a strategy to increase pollination efficiency. Sorbus aucuparia is a masting tree typically showing rather low fruit set, though with some variation among years and populations, together with marked among-year variation in flower and fruit production. Here we report a study of the reproductive biology and insect-visitor spectrum of S. aucuparia in the NW Iberian Peninsula. Results obtained over a 4-year period indicate marked self-incompatibility, so that fruit set is strongly dependent on pollinator service. Nevertheless, fruit and seed set were not limited by pollen supply in any of the years of study, since fruit and seed set after manual cross-pollination were no higher than after natural pollination. Inflorescences were visited by diverse insect species. There was no significant correlation between fruit set and insect visit frequency. Taken together, these findings indicate that the rather low fruit and seed sets observed in this species, and the spatiotemporal variation in these parameters, must be attributed to other factors, such as abiotic resource availability. We conclude that masting in S. aucuparia is probably not a strategy for increasing pollination efficiency.     

Climatic limits of pink bollworm in Arizona and California: effects of climate warming

The distribution and abundance of pink bollworm (Pectinophora gossypiella Saunders (PBW)) in cotton in Arizona and California was examined using a validated weather-driven, physiologically based demographic model of cotton and PBW integrated into a geographic information system (GIS). Survival of diapause larvae during winter as affected by low temperatures is a key factor determining the range of PBW. Winter survival was estimated using data from Gutierrez et al. (Can. Entomol. 109 (1977) 1457) and Venette et al. (Environ. Entomol. 29 (5) (2000) 1018). The model was run continuously over the period 1 January 1995 to 31 December 2003 using observed weather data from 121 locations. Three output variables were mapped as measures of PBW persistence: over-winter survival of diapause PBW larvae, cumulative daily PBW larval densities over the season, and the number of diapause larvae produced during the season. The distribution of pink bollworm is predicted to be restricted to the relatively frost-free cotton growing areas of Arizona and Southern California where it currently reaches pest status. The model predicts that extension of PBW's range into the Central Valley of California is unlikely. The analysis questions the efficacy of an ongoing area-wide effort to prevent the establishment of PBW in the Central Valley of California. Four global warming scenarios were examined to estimate the effects on the potential geographic range of PBW. Average observed daily temperatures were increased 1.0, 1.5, 2.0 or 2.5 °C, respectively, in the four scenarios. Scenarios with average increases of 1.5–2.5 °C predicted that the range of PBW would expand into the Central Valley of California and the severity of the pest would greatly increase in areas of current infestation.     

The effects of nutrient availability and removal of competing vegetation on resprouter capacity and nutrient accumulation in the shrub Erica multiflora

Nutrient availability is increasing in the Mediterranean Basin due to the great number and intensity of fires and higher levels of anthropomorphic pollution. In the experiment described in this paper, we aimed to determine the effects of N and P availability and of the removal of competing vegetation on resprouter capacity, biomass, and nutrient accumulation in Erica multiflora. Plants of the resprouter species E. multiflora were clipped to 0% of aerial biomass in a post-fire Mediterranean shrubland and fertilisation experiments and removal of competing vegetation were established in a factorial design. The resprouting of clipped plants was monitored during the first year after clipping and at the end of the year, all plant resprout populations were harvested and their resprout structure, biomass and N and P content measured. N fertilisation had no significant effect on leaf biomass either at plant level or on the total aerial biomass per stump unit area; however N concentration in resprout biomass did increased. P fertilisation slightly increased resprouting vigour and had a significant effect on P content of the leaf biomass. The removal of competing vegetation increased the ratio between leaf biomass and stem biomass, the lateral expansion of resprout, the hierarchy of resprouts branching, and the P content of stems, above all when P fertilisation was applied. These results show that as a response to decreased competition E. multiflora has the capacity to modify the relative proportions of the nutrients in the aerial biomass. All these characteristics allow E. multiflora to persist in increasingly disturbed Mediterranean ecosystems and contribute to the retention of nutrients in the ecosystem during early resprouting phases.     

3D models for vascular lumen segmentation in MRA images and for artery-stenting simulation

Arterial stenoses and aneurysms are increasingly treated using stents. The goal of this work is to facilitate the pre-operative choice of the stent's length and diameter. Two models are used to accomplish this task: a deformable cylindrical simplex (DCS) model of the arterial intra-luminal wall and a right generalized cylinder (RGC) model representing the stent's geometrical properties. An angiographic 3D image is first segmented using the DCS model to create a patient-specific vascular model. The RGC model of a folded stent is then slid along the vessel centerline until an interactively chosen delivery location, and the model's geometry is modified to simulate the unfolding of the stent. Lastly, the DCS model is re-meshed to fit the shape of the unfolded-stent model and thus to simulate the shape of the arterial lumen boundaries after stenting. Accuracy of the segmentation was quantitatively evaluated in images of arterial phantoms with stenoses ranging from 50 to 95%. Mean error of the resulting diameter estimation was 4.24%. The simulation of the stent insertion is qualitatively illustrated using data of a patient with an aneurysm in the aorta arch.     

Species richness of vascular plants,bryophytes, and lichens along an altitudinal gradient in western Norway

Species richness patterns of ground-dwelling vascular plants, bryophytes, and lichens were compared along an altitudinal gradient (310–1135 m a.s.l.), in western Norway. Total species richness peaked at intermediate altitudes, vascular plant species richness peaked immediately above the forest limit (at 600–700 m a.s.l.), bryophyte species richness had no statistically significant trend, whereas lichen richness increased from the lowest point and up to the forest limit, with no trend above. It is proposed that the pattern in vascular plant species richness is enhanced by an ecotone effect. Bryophyte species richness responds to local scale factors whereas the lichen species richness may be responding to the shading from the forest trees.     

High‐throughput phenotyping of avoidance learning in mice discriminates different genotypes and identifies a novel gene

Recognizing and avoiding aversive situations are central aspects of mammalian cognition. These abilities are essential for health and survival and are expected to have a prominent genetic basis. We modeled these abilities in eight common mouse inbred strains covering ～75% of the species' natural variation and in gene‐trap mice (>2000 mice), using an unsupervised, automated assay with an instrumented home cage (PhenoTyper) containing a shelter with two entrances. Mice visited this shelter for 20–1200 times/24 h and 71% of all mice developed a significant and often strong preference for one entrance. Subsequently, a mild aversive stimulus (shelter illumination) was automatically delivered when mice used their preferred entrance. Different genotypes developed different coping strategies. Firstly, the number of entries via the preferred entrance decreased in DBA/2J, C57BL/6J and 129S1/SvImJ, indicating that these genotypes associated one specific entrance with the aversive stimulus. Secondly, mice started sleeping outside (C57BL/6J, DBA/2J), indicating they associated the shelter, in general, with the aversive stimulus. Some mice showed no evidence for an association between the entrance and the aversive light, but did show markedly shorter shelter residence times in response to illumination, indicating they did perceive illumination as aversive. Finally, using this assay, we screened 43 different mutants, which yielded a novel gene, specc1/cytospinB. This mutant showed profound and specific delay in avoidance learning. Together, these data suggest that different genotypes express distinct learning and/or memory of associations between shelter entrance and aversive stimuli, and that specc1/cytospinB is involved in this aspect of cognition.     

Neighbourhood association of Cortaderia selloana invasion,soil properties and plant community structure in Mediterranean coastal grasslands

Invasion by alien species is threatening the conservation of native plant communities and the integrity of ecosystems. To gain a better understanding of such impacts, many studies have examined the traits that make alien species successful invaders as well as the factors involved in community invasibility. However, it is necessary to link invader effects on community structure and on ecosystem processes in order to unravel the mechanisms of impact. Cortaderia selloana is a perennial grass native to South America that is invading abandoned agricultural lands close to coastal human settlements in Catalonia (NE Spain). In invaded pastures, we examined the association between C. selloana invasion, soil properties and vegetation structure changes in pastures, comparing the neighbourhood area of influence of C. selloana with areas far from C. selloana. Areas under the influence of C. selloana had lower total soil nitrogen values and higher C/N values than in areas far from C. selloana. Furthermore, the areas affected by C. selloana had lower species, family and life form richness and diversity, and less plant cover. In addition, C. selloana also increased the vertical vegetation structure and changed species composition (only 44% similarity between invaded and non-invaded areas). Our results point out that C. selloana has an effect on its neighbourhood leading to an increase in small-scale variability within invaded fields.     

Seed size: a key trait determining species distribution and diversity of dry tropical forest in northern India

The study examined the relationships among seed size, plant distribution and abundance in a dry tropical forest of northern India. Results indicated that small-seeded species, which were generally wind-dispersed, were more widely distributed, at this local scale, compared to large-seeded species. However, the proportional abundance and basal cover of seed size categories indicated that the structure of the dry forest was largely determined by the medium- to large-seeded species. There was a considerable amount of redundancy within each seed size group, which added to the species diversity. Variability in seed size and the variable degree of shade-tolerance permit the species to occupy the full range of the gradient of light environments of the forest floor. This study revealed that in little to moderately disturbed locations seedlings of large-seeded species increased in abundance, whereas in extremely perturbed locations seedlings of species with medium-sized to small seeds were more abundant.     

Interactions between root and shoot competition among four plant species in an alpine meadow on the Tibetan Plateau

At low altitudes, the interactions between root and shoot competition on plant growth have been extensively studied, and such interaction effects were found to be positive, negative, or neutral. However, little is known about such effects at high altitudes where the environmental conditions are harsher than those at low altitudes. We carried out a field experiment in an alpine meadow in the northeast Tibetan Plateau to test the hypothesis that a negative interaction between root and shoot competition exists for alpine plant species. Root and shoot competition were experimentally manipulated in the four grass species (Kobresia humilis, Saussurea superba, Stipa aliena and Elymus nutans). We found that K. humilis and S. aliena grew better without competition, whereas S. superba grew better with shoot competition and E. nutans grew better with root competition. The interactions between root and shoot competition were negative in K. humilis, positive in S. superba, but neutral in S. aliena and E. nutans, suggesting that the interaction effects are species-specific. This study also suggested that alpine plants may trade off both plant–plant interactions and competition shift between root and shoot to adapt to stressful environments.     

Characterization and functional analysis of hsp21.8b: An orthologous small heat shock protein gene in Tribolium castaneum

Small heat shock proteins (sHSPs) act as molecular chaperones and are widely distributed in all kinds of organisms. Comparative analysis revealed that an orthologous shsp was present during insect evolution. Here, hsp21.8b, one insect orthologous shsp, had been identified in Tribolium castaneum. Quantitative real‐time PCR illustrated that Tchsp21.8b was expressed in all developmental stages, along with the lowest expression at early embryonic stage and relative high expression at other stages especially in late eggs and late pupae. In the adult period, Tchsp21.8b exhibited the highest expression level in central nervous system and followed in elytron, epidermis, ovary and fat body. Moreover, it was upregulated 3.39‐fold in response to enhanced heat stress (45°C) for 4 hr but not to cold stress (4°C) and was upregulated by 1.73‐ to 1.94‐fold under ultraviolet (UV) exposure during 4–6 hr. It was also downregulated by 20.8%–41.8% under starvation in 3 days and had a “down‐up‐down” trend under the pathogen stresses. Larval RNA interference of Tchsp21.8b caused 40.6% insects mortality and reduced the oviposition amount by 66.0% and only 21.0% of the ds‐Tchsp21.8b eggs could hatch into larvae. These results suggested that as an orthologous shsp, Tchsp21.8b not only plays important roles in the growth, development and fecundity of T. castaneum but with the competence to resist the environment stresses, although the response is relatively weak compared to other hsps. Results from this study also uncovered the functions of the orthologous shsp in the development and anti‐stresses ability of T. castanuem. It provided more scientific evidence for revealing the physiological mechanisms of shsps of the insects and enhanced the capabilities to control different pests.     

Assessing transpiration in the tussock grass Stipa tenacissima L.: the crucial role of the interplay between morphology and physiology

Plant transpiration has a key role on both plant performance and ecosystem functioning in arid zones, but realistic estimates at appropriate spatial-temporal scales are scarce. Leaf and tiller morphology and crown architecture were studied together with leaf physiology and whole plant water balance in four individual plants of Stipa tenacissima of different sizes to determine the relative influence of processes taking place at different spatial and temporal scales on whole plant transpiration. Transpiration was estimated in potted plants by leaf-level gas exchange techniques (infrared gas analyzer and porometer), by sap flow measurements, and by integrating leaf physiology and crown architecture with the 3-D computer model Yplant. Daily transpiration of each individual plant was monitored using a gravimetric method, which rendered the reference values. Leaves on each individual plant significantly varied in their physiological status. Young and green parts of the leaves showed five times higher chlorophyll concentration and greater photosynthetic capacity than the senescent parts of the foliage. Instantaneous leaf-level transpiration measurements should not be used to estimate plant transpiration, owing to the fact that extrapolations overestimated individual transpiration by more than 100%. Considering leaf age effects and scaling the estimates according to the relative amount of each foliage category reduced this difference to 46% though it was still significantly higher than gravimetric measurements. Sap flow calculations also overestimated tussock transpiration. However, 3-D reconstruction of plants with Yplant and transpiration estimates, considering both the physiological status and the daily pattern of radiation experienced by each individual leaf section within the crown, matched the gravimetric measurements (differences were only 4.4%). The complex interplay of leaf physiology and crown structure must be taken into account in scaling up plant transpiration from instantaneous, leaf-level measurements, and our study indicates that transpiration of complex crowns is easily overestimated.     

Maastrichtian calcareous nannofossil biostratigraphy and paleoecology in the Equatorial Atlantic (Demerara Rise, ODP Leg 207 Hole 1258A)

Species richness, absolute and relative abundances of Maastrichtian calcareous nannofossils were analyzed in Hole 1258A. Absolute abundances of taxa were used for the biozonation of this hole and the record of successive bio-events. Distribution patterns of cool water taxa such as Ahmuellerella octoradiata, Gartnerago segmentatum and Kamptnerius magnificus underscore two major cooling events. These events occurred during Chron C31r and during undifferentiated Chrons C31n to C30n. The latter event appears to be accompanied by lowered productivity, as expressed by the lower abundances of fertility index taxa Biscutum constans and Zeugrhabdotus spp. An end-Maastrichtian warming event is recorded in Chron C29r by the sudden drop in abundance of cool water taxa and acme of tropical taxon Micula murus. The disappearance of B. constans just before this event and the significant increase of Micula decussata, respectively, suggest lowered productivity and high-stress environmental conditions prior to the K/P boundary (Cretaceous-Paleogene). These results correlate very well with the climatic scenario proposed by Li and Keller (1998a) in South Atlantic Hole 525A as suggested by stable isotopes and distribution patterns of planktic foraminifera.     

Microhabitat Preference of Egernia napoleonis in Undisturbed Jarrah Forest,and Availability and Introduction of Microhabitats to Encourage Colonization of Restored Forest

An animal's microhabitat requirements can impact its ability to colonize restored areas, particularly species requiring slow developing microhabitats, such as logs and woody debris piles. Introduction of these microhabitats may be required to facilitate colonization by some species. Restored bauxite mine‐pits in the Jarrah (Eucalyptus marginata) forest of south‐western Australia contain introduced log piles at densities of 1 ha^?1. However, these have not facilitated colonization by Napoleon's skink (Egernia napoleonis), which rely on logs for habitat and are largely absent from restored sites. We radio‐tracked 12 skinks in unmined forest to determine their microhabitat preferences and examined differences in vegetation structure, and microhabitat and food availability, between restored and unmined forests to identify reasons for their absence. Restored and unmined forests differed in canopy, mid‐ and understory cover and ground substrates, which were all potential barriers to colonization. Food availability was similar between restored and unmined forest, thus not a barrier to colonization. Skinks primarily utilized long logs, large woody debris piles, and large trees; microhabitats that were scarce or absent in restored sites and, therefore, potential barriers to colonization. Using this information, we introduced small woody debris piles into restored sites in close proximity to unmined areas containing skinks to facilitate skink colonization. This showed early signs of success and suggested that the lack of logs and woody debris were barriers to colonization. However, further monitoring is required to accurately determine the long‐term value of woody debris piles in facilitating skink colonization.     

Organogenesis in vitro

Organoids are three-dimensional structures that self-organize from human pluripotent stem cells or primary tissue, potentially serving as a traceable and manipulatable platform to facilitate our understanding of organogenesis. Despite the ongoing advancement in generating organoids of diverse systems, biological applications of in vitro generated organoids remain as a major challenge in part due to a substantial lack of intricate complexity. The studies of development and regeneration enumerate the essential roles of highly diversified nonepithelial populations such as mesenchyme and endothelium in directing fate specification, morphogenesis, and maturation. Furthermore, organoids with physiological and homeostatic functions require direct and indirect inter-organ crosstalk recapitulating what is seen in organogenesis. We herein review the evolving organoid technology at the cell, tissue, organ, and system level with a main emphasis on endoderm derivatives.