Demographic Drivers of Aboveground Biomass Dynamics During Secondary Succession in Neotropical Dry and Wet Forests

The magnitude of the carbon sink in second-growth forests is expected to vary with successional biomass dynamics resulting from tree growth, recruitment, and mortality, and with the effects of climate on these dynamics. We compare aboveground biomass dynamics of dry and wet Neotropical forests, based on monitoring data gathered over 3–16 years in forests covering the first 25 years of succession. We estimated standing biomass, annual biomass change, and contributions of tree growth, recruitment, and mortality. We also evaluated tree species’ contributions to biomass dynamics. Absolute rates of biomass change were lower in dry forests, 2.3 and 1.9 Mg ha^?1 y^?1, after 5–15 and 15–25 years after abandonment, respectively, than in wet forests, with 4.7 and 6.1 Mg ha^?1 y^?1, in the same age classes. Biomass change was largely driven by tree growth, accounting for at least 48% of biomass change across forest types and age classes. Mortality also contributed strongly to biomass change in wet forests of 5–15 years, whereas its contribution became important later in succession in dry forests. Biomass dynamics tended to be dominated by fewer species in early-successional dry than wet forests, but dominance was strong in both forest types. Overall, our results indicate that biomass dynamics during succession are faster in Neotropical wet than dry forests, with high tree mortality earlier in succession in the wet forests. Long-term monitoring of second-growth tropical forest plots is crucial for improving estimates of annual biomass change, and for enhancing understanding of the underlying mechanisms and demographic drivers.     

Occurrence of Dermatophytes in Fresh Bat Guano

Evidence is presented in support of the hypothesis that fresh bat guano serves as a means of pathogenic fungi dissemination in caves. A total of 371 guano samples were collected from caves in southeastern New Mexico. Each sample was agitated in sterile saline and sand. The supernatant fluid was treated with an antibiotic and streaked on differential media. Cultures were incubated at 25 and 37 C and examined at intervals over a 4-week period. For animal inoculation, highly concentrated inoculum was injected intraperitoneally into white Swiss mice. Animals were sacrificed 4 weeks later, and portions of their lung, liver, and spleen were cultured on selective media, incubated at 25 C, and examined at intervals over a 4-week period. Microsporum gypseum was isolated at all 10 collecting stations with an incidence of 22.4%, Trichophyton mentagrophytes at 7 stations with an incidence of 5%, T. rubrum at 3 stations with an incidence of 3%, and T. terrestre at 1 station with an incidence of 0.5%. From a total of 60 pools of liver-spleen-lung suspensions, 6 pools yielded positive cultures of Histoplasma capsulatum and 1 pool yielded T. mentagrophytes. No significant difference was found among the different selective media with respect to recovery of dermatophytes. Among the human pathogenic fungi isolated were Candida sp., Cladosporium sp., Coccidioides immitis, Cryptococcus neoformans, H. capsulatum, M. gypseum, T. mentagrophytes, T. rubrum, T. terrestre, and Sporotrichum sp.     

Carbon Accumulation in Neotropical Dry Secondary Forests: The Roles of Forest Age and Tree Dominance and Diversity

Tropical secondary forests are important sinks for atmospheric carbon, yet C uptake and accumulation rates are highly uncertain, and the mechanisms poorly understood. We evaluated the recovery of C stocks in four pools (aboveground biomass, litter, roots and topsoil) during dry forest regrowth by combining a space for time replacement (that is, a chronosequence) with a repeated measurements approach (that is, a resampling). We fit nonlinear models to chronosequence data to test whether forest age could explain differences in C stocks across sites, and to changes in aboveground biomass calculated from resampling over two 3-year periods, to test the predictive potential of forest age. We combined data from both approaches into structural equation models (SEM) to assess forest age and tree community attributes (diversity and dominance) as drivers of C stocks and changes in aboveground biomass. Forest age explained differences across sites in C stocks for aboveground biomass, litter and live roots, but not for the remaining pools. Observed C stock changes in aboveground biomass were poorly predicted by forest age. SEM revealed that aboveground biomass C was consistently and positively related to forest age and to the community weighted mean of maximum tree height (H _max CWM), but not to tree diversity. Observed C stock changes were related only to H _max CWM, although not consistently across the two 3-year periods. Our results highlight that the chronosequence approach can yield reasonable insights into long-term C accumulation trends, but erroneous estimates of C change over specific time periods. They also show that, in addition to age, dominance by tall statured species, but not tree species diversity, plays a significant role in C accumulation.     

Bioecological Drivers of Rabies Virus Circulation in a Neotropical Bat Community

Introduction

In addition to the commonly accepted importance of the vampire bat in the maintenance and transmission of the rabies virus (RABV) in South America, RABV infection of other species is widely evidenced, challenging their role in the viral cycle.

Methodology / Principles findings

To identify the bioecological drivers of RABV circulation in neotropical bat communities, we conducted a molecular and serological survey on almost 1,000 bats from 30 species, and a 4-year longitudinal survey in two colonies of vampire bats in French Guiana. RABV was molecularly detected in a common vampire and in a frugivorous bat. The sequences corresponded to haematophagous bat-related strains and were close to viruses circulating in the Brazilian Amazon region. Species’ seroprevalence ranged from 0 to 20%, and the risk of seropositivity was higher in bats with a haematophagous diet, living in monospecific colonies and in dense forests. The longitudinal survey showed substantial temporal fluctuations, with individual waves of seroconversions and waning immunity. The high prevalences observed in bat communities, in most habitats and in species that do not share the same microhabitats and bioecological patterns, the temporal variations, and a rather short period of detectable antibodies as observed in recaptured vampires suggest (i) frequent exposure of animals, (ii) an ability of the infected host to control and eliminate the virus, (iii) more relaxed modes of exposure between bats than the commonly assumed infection via direct contact with saliva of infected animals, all of which should be further investigated.

Conclusions / significance

We hypothesize that RABV circulation in French Guiana is mainly maintained in the pristine forest habitats that may provide sufficient food resources to allow vampire bats, the main prevalent species, to survive and RABV to be propagated. However, on the forest edge and in disturbed areas, human activities may induce more insidious effects such as defaunation. One of the ecological consequences is the disappearance of resources for tertiary or secondary consumers. Populations of vampires may then shift to alternative resources such as cattle, domestic animals and humans. Therefore, a good forest status, allowing both a dilution effect in highly rich bat communities and the maintenance of large populations of medium-sized and large mammals used as prey by vampires, should prevent their migration to anthropized areas.     

Fire Interval Effects on Successional Trajectory in Boreal Forests of Northwest Canada

Although succession may follow multiple pathways in a given environment, the causes of such variation are often elusive. This paper describes how changes in fire interval mediate successional trajectory in conifer-dominated boreal forests of northwestern Canada. Tree densities were measured 5 and 19 years after fire in permanent plots and related to pre-fire vegetation, site and fire characteristics. In stands that were greater than 75 years of age when they burned, recruitment density of conifers was significantly correlated with pre-fire species basal area, supporting the expectation of stand self-replacement as the most common successional pathway in these forests. In contrast, stands that were under 25 years of age at the time of burning had significantly reduced conifer recruitment, but showed no change in recruitment of trembling aspen (Populus tremuloides). As a result, young-burned stands had a much higher probability of regenerating to deciduous dominance than mature-burned stands, despite the dominance of both groups by spruce (Picea mariana and Picea glauca) and pine (Pinus contorta) before the fire. Once initiated, deciduous-dominated stands may be maintained across subsequent fire cycles through mechanisms such as low on-site availability of conifer seed, competition with the aspen canopy, and rapid asexual regeneration of aspen after fire. We suggest that climate-related increases in fire frequency could trigger more frequent shifts from conifer to deciduous-dominated successional trajectories in the future, with consequent effects on multiple ecosystem processes.     

Phenology of Tree Species in Bolivian Dry Forests

Phenological characteristics of 453 individuals representing 39 tree species were investigated in two dry forests of the Lomerío region, Department of Santa Cruz, Bolivia. The leaf, flower, and fruit production of canopy and sub–canopy forest tree species were recorded monthly over a two–year period. Most canopy species lost their leaves during the dry season, whereas nearly all sub–canopy species retained their leaves. Peak leaf fall for canopy trees coincided with the peak of the dry season in July and August. Flushing of new leaves was complete by November in the early rainy season. Flowering and fruiting were bimodal, with a major peak occurring at the end of the dry season (August–October) and a minor peak during the rainy season (January). Fruit development was sufficiently long in this forest that fruiting peaks actually tended to precede flowering peaks by one month. A scarcity of fruit was observed in May, corresponding to the end of the rainy season. With the exception of figs (Ficus), most species had fairly synchronous fruit production. Most canopy trees had small, wind dispersed seeds or fruits that matured during the latter part of the dry season, whereas many sub–canopy tree species produced larger animal– or gravity–dispersed fruits that matured during the peak of the rainy season. Most species produced fruit annually. Lomerio received less rainfall than other tropical dry forests in which phenological studies have been conducted, but rainfall can be plentiful during the dry season in association with the passage of Antarctic cold fronts. Still, phenological patterns in Bolivian dry forests appear to be similar to those of other Neotropical dry forests.     

Changes in Forest Soil Properties in Different Successional Stages in Lower Tropical China

Background

Natural forest succession often affects soil physical and chemical properties. Selected physical and chemical soil properties were studied in an old-growth forest across a forest successional series in Dinghushan Nature Reserve, Southern China.

Methodology/Principal Findings

The aim was to assess the effects of forest succession change on soil properties. Soil samples (0–20 cm depth) were collected from three forest types at different succession stages, namely pine (Pinus massoniana) forest (PMF), mixed pine and broadleaf forest (PBMF) and monsoon evergreen broadleaf forest (MEBF), representing early, middle and advanced successional stages respectively. The soil samples were analyzed for soil water storage (SWS), soil organic matter (SOM), soil microbial biomass carbon (SMBC), pH, NH₄ ⁺-N, available potassium (K), available phosphorus (P) and microelements (available copper (Cu), available zinc (Zn), available iron (Fe) and available boron (B)) between 1999 and 2009. The results showed that SWS, SOM, SMBC, Cu, Zn, Fe and B concentrations were higher in the advanced successional stage (MEBF stage). Conversely, P and pH were lower in the MEBF but higher in the PMF (early successional stage). pH, NH₄ ⁺-N, P and K declined while SOM, Zn, Cu, Fe and B increased with increasing forest age. Soil pH was lower than 4.5 in the three forest types, indicating that the surface soil was acidic, a stable trend in Dinghushan.

Conclusion/Significance

These findings demonstrated significant impacts of natural succession in an old-growth forest on the surface soil nutrient properties and organic matter. Changes in soil properties along the forest succession gradient may be a useful index for evaluating the successional stages of the subtropical forests. We caution that our inferences are drawn from a pseudo-replicated chronosequence, as true replicates were difficult to find. Further studies are needed to draw rigorous conclusions regarding on nutrient dynamics in different successional stages of forest.     

Bat fly species richness in Neotropical bats: correlations with host ecology and host brain

Patterns of ectoparasite species richness in mammals have been investigated in various terrestrial mammalian taxa such as primates, ungulates and carnivores. Several ecological or life traits of hosts are expected to explain much of the variability in species richness of parasites. In the present comparative analysis we investigate some determinants of parasite richness in bats, a large and understudied group of flying mammals, and their obligate blood-sucking ectoparasite, streblid bat flies (Diptera). We investigate the effects of host body size, geographical range, group size and roosting ecology on the species richness of bat flies in tropical areas of Venezuela and Peru, where both host and parasite diversities are high. We use the data from a major sampling effort on 138 bat species from nine families. We also investigate potential correlation between bat fly species richness and brain size (corrected for body size) in these tropical bats. We expect a relationship if there is a potential energetic trade-off between costly large brains and parasite-mediated impacts. We show that body size and roosting in cavities are positively correlated with bat fly species richness. No effects of bat range size and group size were observed. Our results also suggest an association between body mass-independent brain size and bat fly species richness. Electronic supplementary material  The online version of this article (doi:) contains supplementary material, which is available to authorized users.     

Assessing Level of Development and Successional Stages in Biological Soil Crusts with Biological Indicators

Biological soil crusts (BSCs) perform vital ecosystem services, but the difference in biological components or developmental level still affects the rate and type of these services. In order to differentiate crust successional stages in quantity and analyze the relationship between crust developmental level and successional stages, this work determined several biological indicators in a series of different developmental BSCs in the Shapotou region of China. The results showed that crust developmental level (level of development index) can be well indicated by crust biological indicators. Photosynthetic biomass was the most appropriate to differentiate crust successional stages, although both photosynthetic biomass and respiration intensity increased with the development and succession of BSCs. Based on of the different biological compositions, BSCs were quantificationally categorized into different successional stages including cyanobacterial crusts (lichen and moss coverages <20 %), lichen crusts (lichen coverage >20 % but moss coverage <20 %), semi-moss crusts (moss coverage >20 % but <75 %), and moss crusts (moss coverage >75 %). In addition, it was found that cyanobacterial and microalgal biomass first increased as cyanobacterial crusts formed, then decreased when lots of mosses emerged on the crust surface; however nitrogen-fixing cyanobacteria and heterotrophic microbes increased in the later developmental BSCs. The structural adjustment of biological components in the different developmental BSCs may reflect the requirement of crust survival and material transition.     

Successional Changes in the Microbial Community of the Alkaline Lake Khilganta during the Dry Season

Microbial processes in a shallow, saline, alkaline Lake Khilganta (Southern Siberia) were studied during the dry season. During the drought, a crust was formed on the lake surface, where low rates of production processes were observed, with predominance of anoxygenic photosynthesis at 2.3 mg C/(dm³ day). The rates of microbial processes increased after short-term rains. During this period, a thin cyanobacterial mat was formed on the bottom, in which filamentous cyanbacteria Geitlerinema spp. predominated and the rate of oxygenic photosynthesis was up to 18 mg C/(dm³ day). Subsequent water evaporation and salinity increase resulted in altered community types and their activity. Red spots emerged on the mat surface, where anoxygenic prototrophic members of the genus Ectothiorhodospira predominated. Anoxygenic photosynthesis became the main production process in microbial mats, with the rate of 60 mg C/(dm³ day). At salinity increase to 200 g/L, the water remained in small depressions on the bottom, where extremophilic green algae Dunaliella sp. predominated, and the rate of oxygenic photosynthesis was 0.877 mg C/(dm³ day). These changes in the type and activity of microbial communities is an example of succession of microbial communities in Southern Siberia saline lakes during drought.     

Litterfall Production Along Successional and Altitudinal Gradients of Subtropical Monsoon Evergreen Broadleaved Forests in Guangdong, China

Evaluation of litterfall production is important for understanding nutrient cycling, forest growth, successional pathways, and interactions with environmental variables in forest ecosystems. Litterfall was intensively studied during the period of 1982–2001 in two subtropical monsoon vegetation gradients in the Dinghushan Biosphere Reserve, Guangdong Province, China. The two gradients include: (1) a successional gradient composed of pine forest (PF), mixed pine and broadleaved forest (MF) and monsoon evergreen broadleaved forest (BF), and (2) an altitudinal gradient composed of Baiyunci ravine rain forest (BRF), Qingyunci ravine rain forest (QRF), BF and mountainous evergreen broadleaved forest (MMF). Mean annual litterfall production was 356, 861 and 849 g m⁻² for PF, MF and BF of the successional gradient, and 1016, 1061, 849 and 489 g m⁻² for BRF, QRF, BF and MMF of the altitudinal gradient, respectively. As expected, mean annual litterfall of the pioneer forest PF was the lowest, but rapidly increased over the observation period while those in other forests were relatively stable, confirming that forest litterfall production is closely related to successional stages and growth patterns. Leaf proportions of total litterfall in PF, MF, BF, BRF, QRF and MMF were 76.4%, 68.4%, 56.8%, 55.7%, 57.6% and 69.2%, respectively, which were consistent with the results from studies in other evergreen broadleaved forests. Our analysis on litterfall monthly distributions indicated that litterfall production was much higher during the period of April to September compared to other months for all studied forest types. Although there were significant impacts of some climate variables (maximum and effective temperatures) on litterfall production in some of the studied forests, the mechanisms of how climate factors (temperature and rainfall) interactively affect litterfall await further study.     

Occurrence Patterns of Lichens on Stumps in Young Managed Forests

The increasing demand for forest-derived bio-fuel may decrease the amount of dead wood and hence also the amount of available substrate for saproxylic ( = dead-wood dependent) organisms. Cut stumps constitute a large portion of dead wood in managed boreal forests. The lichen flora of such stumps has received little interest. Therefore, we investigated which lichens that occur on stumps in young (4–19 years), managed forests and analyzed how species richness and occurrence of individual species were related to stump and stand characteristics. We performed lichen inventories of 576 Norway spruce stumps in 48 forest stands in two study areas in Central Sweden, recording in total 77 lichen species. Of these, 14 were obligately lignicolous, while the remaining were generalists that also grow on bark, soil or rocks. We tested the effect of characteristics reflecting successional stage, microclimate, substrate patch size, and the species pool in the surrounding area on (1) total lichen species richness, (2) species richness of obligately lignicolous lichens and (3) the occurrence of four obligately lignicolous lichen species. The most important variables were stump age, with more species on old stumps, and study area, with similar total species richness but differences in occupancy for individual species. Responses for total lichen species richness and species richness of obligately lignicolous lichens were overall similar, indicating similar ecological requirements of these two groups. Our results indicate that species richness measurements serve as poor proxies for the responses of individual, obligately lignicolous lichen species.     

Successional Position of Dry Andean Dwarf Forest Species as a Basis for Restoration Trials

The successional affinity of nine woody species was inferred from the structure, diversity and disturbance history of the vegetation where these occurred. This was done in order to obtain a basis for a restoration experiment, currently in execution, in the dry Andean dwarf forest zone on the edge of the High Plain of Bogotá (Colombia), at 2600–2950 m.a.s.l. We laid out 101 relevees in grassland and shrubland types in different stages of recovery, and in relatively little disturbed endemic Condalia thomasiana dwarf forest. The disturbance history of sites over the last ~60 years was inferred from aerial photograph series (1941–1991). CCA and logistic regression were applied to relate species composition to diversity, environment and disturbance history. All species showed a preference for certain structural groups. Also, a clear relation between species occurrence and vegetation diversity was found. Baccharis macrantha, and Dalea coerulea appeared relatively tolerant to grazing, while the remaining seven species reacted negatively. Soil clay content, base availability and organic carbon content was also an important factor for occurrence of each species. Invasion of grasslands by woody species is pioneered by Baccharis macrantha and followed by Dodonaea viscosa. Dalea coerulea was predominantly found on truncated clayey soils, which will probably not support Condalia dwarf forest. The hypothesized classification of the nine planted species to either pioneers or late-successional was fine-tuned. This exploratory study will be of use in the set-up of future succession-based restoration experiments, and for converting exotics afforestations to natural vegetation.     

Restoring Caribbean Dry Forests: Evaluation of Tree Propagation Techniques

Survival and height growth of tree seedlings and rooted cuttings introduced into artificially shaded and unshaded plots in a degraded dry forest were measured at intervals for nine months. Ten tree species were selected to represent a range of ecological characteristics of the dry–forest plant community on St. John, U.S. Virgin Islands. Of three propagule types – seeds, seedlings, and rooted cuttings – introduced to field plots, seedlings survived best (52%) over the initial nine-month period. Cuttings of six species rooted successfully in a shadehouse, but only two of these species survived the nine–month field experiment. Seed germination was low, under 11% for eight of ten species tested, and four species did not germinate. Subsequent mortality of seedling recruits was moderately high. Plumeria alba was the only species for which seedling height growth was not significantly greater than cutting height growth. Shading treatment (25% of full sun) significantly increased seedling survivorship (p= 0.03) but suppressed growth slightly for some species. Shading enhanced survival of seedlings produced from broadcast seeds, but not seed germination. Mortality occurred during dry periods, apparently from drought stress. Results suggest (1) that seedling introductions are the preferred propagule type (over seeding or rooted cuttings) for ecological restoration of degraded tropical dry forests, and (2) that some level of shading is required to increase the survivorship of many dry-forest species or to avert complete mortality of some species. This study suggests that early secondary dry forest may be best restored by underplanting within the existing vegetation. Sufficient shading suitable for growth of native dry-forest trees may be attained using a nurse crop of fast-growing leguminous trees.     

Bat assemblages on Neotropical land-bridge islands: nested subsets and null model analyses of species co-occurrence patterns

A fundamental goal of ecology is to understand whether ecological communities are structured according to general assembly rules or are essentially dictated by random processes. In the context of fragmentation, understanding assembly patterns and their mechanistic basis also has important implications for conservation. Using distribution data of 20 bat species collected on 11 islands in Gatún Lake, Panama, we tested for non‐randomness in presence–absence matrices with respect to nestedness and negative species co‐occurrence. We examined the causal basis for the observed patterns and conducted separate analyses for the entire assemblage and for various species submatrices reflecting differences in species’ trophic position and mobility. Furthermore, we explored the influence of weighting factors (area, isolation, abundance) on co‐occurrence analyses. Unweighted analyses revealed a significant negative co‐occurrence pattern for the entire assemblage and for phytophagous bats alone. Weighting analyses by isolation retained a pattern of species segregation for the whole assemblage but nullified the non‐random structure for phytophagous bats and suggested negative associations for animalivores and species with low mobility. Area‐ and abundance‐weighted analyses always indicated random structuring. Bat distributions followed a nested subset structure across islands, regardless of whether all species or different submatrices were analysed. Nestedness was in all cases unrelated to island area but weakly correlated with island isolation for incidence matrices of all species, phytophagous bats, and mobile species. Overall, evidence for negative interspecific interactions indicative of competitive effects was weak, corroborating previous studies based on ecomorphological analyses. Our findings indicate that bat assemblages on our study islands are most strongly shaped by isolation effects and species’ differential movement and colonization ability. From a conservation viewpoint this suggests that even in systems with high fragment–matrix contrast, a purely area‐based approach may be inadequate, and structural and functional connectivity among patches are important to consider in reserve planning.