MtDNA reveals strong genetic differentiation among geographically isolated populations of the golden brown mouse lemur, <Emphasis Type="Italic">Microcebus ravelobensis</Emphasis>

Microcebus ravelobensis is an endangered nocturnal primate endemic to northwestern Madagascar. This part of the island is subject to extensive human intervention leading to massive habitat destruction and fragmentation. We investigated the degree of genetic differentiation among remaining populations using mitochondrial control region sequences (479–482 bases). Nine populations were sampled from the hypothesized geographic range. The region is composed of three inter-river systems (IRSs). Samples were collected in three areas of continuous forests (CFs) and six isolated forest fragments (IFFs) of different sizes. We identified 27 haplotypes in 114 animals, with CFs and IFFs harbouring 5–6 and 1–3 haplotypes, respectively. All IFFs were significantly differentiated from each other with high Φ_ST values and sets of unique haplotypes. The rivers constitute significant dispersal barriers with over 82% of the molecular variation being attributed to the divergence among the IRSs. The data suggest a deep and so far unknown split within the rufous mouse lemurs of northwestern Madagascar. The limited data base and the lack of ecological and morphological data do not allow definite taxonomic classification at this stage. However, the results clearly indicate that M. ravelobensis consists of three evolutionary significant units, possibly cryptic species, which warrant urgent and separate conservation efforts.     

Edge effects and extinction proneness in a herpetofauna from Madagascar

Edge effects are thought to play a key role in fragmented habitats. It is often assumed that edge-avoiding species are more prone to local extinction than non-edge-avoiding species, but there are few data to support this assumption. Also, few data are available on the effects of edges on some groups, and there is little understanding of seasonal changes in edge effect intensity. To better understand the role that edge effects play in fragmented tropical forests, we assessed the distribution of reptiles and amphibians in six littoral rainforest fragments in southeastern Madagascar in 1999 (dry season) and 2000 (wet season). Using randomization tests, we found all three types of edge responses: edge-avoiders, interior-avoiders, and omnipresent species. However, edge responses varied considerably among seasons. For example, some species (e.g., Mantidactylus bicalcaratus, Phelsuma quadriocellata) were strong edge-avoiders in the dry season, but showed no preference for edge or interior habitats during the wet season. Also, edge-avoiding species tended to be more extinction-prone than non-edge-avoiding species. Abiotic data documented significantly higher temperatures and dew point temperatures near edges. Wind speed also tended to be higher and relative humidity tended to be lower near edges. Our results indicate that many amphibians and reptiles respond to altered microclimates near edges and these responses have a strong seasonal component. For many species, edge sensitivity does seem to be correlated with extinction vulnerability and therefore should be of primary consideration in plans to conserve biodiversity in fragmented tropical forests.     

Density-dependent dispersal in integrodifference equations

Many species exhibit dispersal processes with positive density- dependence. We model this behavior using an integrodifference equation where the individual dispersal probability is a monotone increasing function of local density. We investigate how this dispersal probability affects the spreading speed of a single population and its ability to persist in fragmented habitats. We demonstrate that density-dependent dispersal probability can act as a mechanism for coexistence of otherwise non-coexisting competitors. We show that in time-varying habitats, an intermediate dispersal probability will evolve. Analytically, we find that the spreading speed for the integrodifference equation with density-dependent dispersal probability is not linearly determined. Furthermore, the next-generation operator is not compact and, in general, neither order-preserving nor monotonicity-preserving. We give two explicit examples of non-monotone, discontinuous traveling-wave profiles.      

Evidence for habitat fragmentation altering within-population processes in wombats

Habitat fragmentation and associated reduced dispersal of wildlife can lead to an accumulation of related individuals in fragments. The altered kin interactions and amplified chance of inbred matings has profound implications for mating and social systems, and ultimately population persistence. Nonetheless, within-fragment population processes are rarely studied. With this aim, we examined relatedness structure in two candidate isolated populations (Kulpara and Scrubby Peak) of southern hairy-nosed wombats ( Lasiorhinus latifrons ). Wombats were sampled by remote hair-trapping for genotyping at 14 microsatellite loci, enabling individual identification and estimation of space-use and associative behaviour with respect to relatedness. Genetic data indicated that Scrubby Peak was not strongly isolated, against predictions from landscape structure and history. In isolated Kulpara, inhibited female dispersal (normally the dispersing sex) was associated with high population density and altered kin relationships. First, female relatives preferentially coexisted, a radical departure from the previously reported active avoidance of female relatives in continuous habitat. This is consistent with females in altered habitat interacting with more- rather than less-related females to minimize the cost:benefit ratio of proximity to other wombats. Second, inbreeding avoidance appeared to be stronger at Kulpara than in conspecific populations with natural population structures. Although these adaptive behaviours may have contributed to persistence of the Kulpara population in the short term, they are unlikely to ensure its long-term viability in the face of ongoing isolation because they can act only to slow the rate of inbreeding and mitigate some of its negative impacts.     

MHC Variability of a Small Lemur in the Littoral Forest Fragments of Southeastern Madagascar

Habitat fragmentation inhibits gene flow between populations often resulting in a loss of genetic diversity with possible negative effects on fitness parameters. In vertebrates, growing evidence suggests that such genetic diversity is particularly important at the level of the major histocompatibility complex (MHC) because its gene products play an important role in immune functions. Diversity in the MHC is assumed to improve population viability. Here, we investigated the impact of forest fragmentation on the genetic variability of one of the functionally important parts of the MHC, DRB exon 2, of the endemic mouse lemur Microcebus murinus by comparing populations inhabiting two littoral forest fragments of different size in southeastern Madagascar. Twelve different alleles of DRB exon 2 were found in 145 individuals of M. murinus with high levels of sequence divergence between alleles. In both subpopulations, levels of genetic diversity were high, and the genetic analyses revealed only limited effects of fragmentation. Significantly more non-synonymous than synonymous substitutions were found in the functionally important antigen recognition and binding sites indicating selection processes maintaining MHC polymorphism. This is the first study on MHC variation in a free-ranging Malagasy lemur population.     

Climate change and coral reef connectivity

This review assesses and predicts the impacts that rapid climate change will have on population connectivity in coral reef ecosystems, using fishes as a model group. Increased ocean temperatures are expected to accelerate larval development, potentially leading to reduced pelagic durations and earlier reef-seeking behaviour. Depending on the spatial arrangement of reefs, the expectation would be a reduction in dispersal distances and the spatial scale of connectivity. Small increase in temperature might enhance the number of larvae surviving the pelagic phase, but larger increases are likely to reduce reproductive output and increase larval mortality. Changes to ocean currents could alter the dynamics of larval supply and changes to planktonic productivity could affect how many larvae survive the pelagic stage and their condition at settlement; however, these patterns are likely to vary greatly from place-to-place and projections of how oceanographic features will change in the future lack sufficient certainty and resolution to make robust predictions. Connectivity could also be compromised by the increased fragmentation of reef habitat due to the effects of coral bleaching and ocean acidification. Changes to the spatial and temporal scales of connectivity have implications for the management of coral reef ecosystems, especially the design and placement of marine-protected areas. The size and spacing of protected areas may need to be strategically adjusted if reserve networks are to retain their efficacy in the future.     

The Chilean coastal range: a vanishing center of biodiversity and endemism in South American temperate rainforests

Temperate forests of southern South America are globally important because of their high level of endemism. I argue here that within southern South America, rainforests of the Chilean Coastal Range should be the primary target for new conservation efforts. Historically, most protected areas in southern South America have been designated to preserve forests above 600 m, mainly in the Andes. However, Coastal Range forests have higher species richness and are under greater threat than Andean forests at similar latitudes. Coastal forests are characterized by the presence of numerous narrow-range endemics, among them two monotypic plant families. The higher frequency of endemic species in Coastal Range forests is attributed to its more stable biogeographic history compared to the Andes, particularly during the glacial events of the Quaternary. Due to the extent of human impact, the remaining fragments of coastal forests are quite distant from one another, and are disconnected from the larger protected areas of Andean forests. Only 439000 ha of Valdivian coastal forest still remain, including some remnants of primary forest. New private or public reserves should be created to protect the last remnants of continuous forest remaining on the Coastal Range of the Valdivian region (40–42° S). A different conservation strategy should be applied north of 40° S, where protected areas are too small and fragments are too scattered to maintain viable populations of most vertebrates. In this latter area, I recommend expanding existing reserves, restoring native forests, and interconnecting remnant forests through a corridor network.     

Low genetic diversities in isolated populations of the Asian black bear (<Emphasis Type="Italic">Ursus thibetanus</Emphasis>) in Japan,in comparison with large stable populations

Populations of the Asian black bear (Ursus thibetanus) are relatively large and continuous in central Honshu, the main island of Japan, but they are isolated in western Honshu. To clarify the degree of genetic isolation of the populations in western Honshu, we compared the genetic diversities of four populations in western Honshu with that of one of the continuous populations of central Honshu. Three of the four western Honshu populations were isolated and the other was continuous with the central Honshu populations on a geographical distribution basis. The genotypes at 10 microsatellite loci of the sampled individuals were determined and the genetic structures of the populations examined. Genetic diversities were significantly lower in the isolated populations than in the continuous populations. The continuous population in central Honshu had high levels of genetic diversity, comparable to those in populations of the American black bear (Ursus americanus) and the brown bear (Ursus arctos). The genetic distances between the two continuous populations were smallest, even though their geographic distance was largest (>200 km) among all the pairs of neighboring populations examined. Low genetic diversity within the isolated populations suggested genetic drift due to the small population size; the genetic differentiation among the populations indicated low rates of gene flow among them.     

Population density, sex ratio, body size and fluctuating asymmetry of Ceroglossus chilensis (Carabidae) in the fragmented Maulino forest and surrounding pine plantations

Habitat fragmentation results in new environmental conditions that may stress resident populations. Such stress may be reflected in demographical or morphological changes in the individuals inhabiting those landscapes. This study evaluates the effects of fragmentation of the Maulino forest on population density, sex ratio, body size, and fluctuating asymmetry (FA) of the endemic carabid Ceroglossus chilensis. Individuals of C. chilensis were collected during 2006 in five locations at Los Queules National Reserve (continuous forest), in five forest fragments and in five areas of surrounding pine plantations (matrix). In each location, once a season, 40 pitfall traps (20 in the centre, 20 in the edge), were opened for 72 h. Population density of C. chilensis was higher in the small fragments than in the pine matrix, with intermediate densities in the continuous forest; sex ratio did not differ significantly from 1:1 in the three habitats. Individuals from the centre of fragments were smaller than those from the centre of continuous forest, and FA did not vary significantly among habitats. These results suggest that small forest fragments maintain dense populations of C. chilensis and therefore they must be considered in conservation strategies. Although the decrease of the body size suggests that small remnants should be connected by managing the structure of the surrounding matrix, facilitating the dispersion of this carabid across the landscape and avoiding possible antagonistic interactions inside small fragments.     

Personality-dependent dispersal in the invasive mosquitofish: group composition matters

Understanding/predicting ecological invasions is an important challenge in modern ecology because of their immense economical and ecological costs. Recent studies have revealed that within-species variation in behaviour (i.e. animal personality) can shed light on the invasion process. The general hypothesis is that individuals' personality type may affect their colonization success, suggesting that some individuals might be better invaders than others. We have recently shown that, in the invasive mosquitofish (Gambusia affinis), social personality trait was an important indicator of dispersal distance, with more asocial individuals dispersing further. Here, we tested how mean personality within a population, in addition to individual personality type, affect dispersal and settlement decisions in the mosquitofish. We found that individual dispersal tendencies were influenced by the population's mean boldness and sociability score. For example, individuals from populations with more asocial individuals or with more bold individuals are more likely to disperse regardless of their own personality type. We suggest that identifying behavioural traits facilitating invasions, even at the group level, can thus have direct applications in pest management.     

Distribution and Conservation of Genetic Diversity Among UK Calcareous Grassland Regions: A Case Study Using Insects

Conservation strategies for whole communities at the landscape scale have rarely been able to take into account genetic diversity because of the number of species involved. However, if species can be grouped together by geographic distribution of genetic diversity and patterns of relatedness, then landscape and genetic conservation might be more effectively combined to cope with problems of fragmentation. We report on a study that measures how genetic diversity is distributed at national and regional scales in four unrelated species of calcareous grassland insects. Samples were obtained from sites within six UK calcareous grassland regions. Genetic diversity was measured using mtDNA sequencing (four species) and allozyme analysis (two of the four species). A striking difference in mtDNA diversity was found between the chrysomelid beetle Aphthona herbigrada (23 haplotypes; mean per region 5.5) and the cicadellid bug Batracomorphus irroratus (27 haplotypes; mean per region 6.2), with high haplotype richness, and the brown argus butterfly Aricia agestis (4 haplotypes; mean per region 1.7) and the cistus forester moth Adscita geryon (5 haplotypes; mean per region 2.4) with low. At the UK scale, patterns of diversity were species specific with no general conservation strategy emerging for the community. However, there was little differentiation among regions and any splitting into more than one management unit was not clearly justified, questioning whether distribution of genetic diversity should be a concern at this spatial scale.     

生境破碎化对食果动物及种子传播的影响

食果动物与依赖其传播种子的植物间在进化过程中形成互惠关系,生境破碎化往往干扰种子传播过程,继而破坏这种关系.生境破碎化通常降低食果动物的多样性,但亦有相反的情况出现.食果动物对生境破碎化的适应能力不同,泛性森林动物和广食性动物具有较强的适应性.生境破碎化对依赖动物传播的植物影响有差异,多数植物受到负面影响,但也有一些植物不受影响,甚至受益.动物在破碎生境中对种子传播的有效性是种子搬运量、传播距离、种子萌发及种群建立等环节的综合效果.破碎化生境中种子的搬运量与动物的觅食行为和食物选择有关;种子传播距离受食物资源可获得性的改变和生境斑块异质性的影响;种子萌发和更新种群建立成功与否决定于是否存在有效的种子传播者.生境破碎化如何影响种子传播以及动植物相互关系,尤其是异质斑块的空间分布如何影响食果动物的传播有效性、破碎化生境下动植物互惠共生关系如何建立,生境破碎化导致的植物入侵对本地植物种子传播的影响是未来需要深入研究的问题.     

Do functional traits offset the effects of fragmentation? The case of large-bodied diurnal lemur species

Primates worldwide are faced with increasing threats making them more vulnerable to extinction. Anthropogenic disturbances, such as habitat degradation and fragmentation, are among the main concerns, and in Madagascar, these issues have become widespread. As this situation continues to worsen, we sought to understand how fragmentation affects primate distribution throughout the island. Further, because species may exhibit different sensitivity to fragmentation, we also aimed to estimate the role of functional traits in mitigating their response. We collated data from 32 large-bodied lemur species ranges, consisting of species from the families Lemuridae (five genera) and Indriidae (two genera). We fitted Generalized Linear Models to determine the role of habitat fragmentation characteristics, for example, forest cover, patch size, edge density, and landscape configuration, as well as the protected area (PA) network, on the species relative probability of presence. We then assessed how the influence of functional traits (dietary guild, home range size) mitigate the response of species to these habitat metrics. Habitat area had a strong positive effect for many species, and there were significantly negative effects of fragmentation on the distribution of many lemur species. In addition, there was a positive influence of PAs on many lemur species’ distribution. Functional trait classifications showed that lemurs of all dietary guilds are negatively affected by fragmentation; however, folivore-frugivores show greater flexibility/variability in terms of habitat area and landscape complexity compared to nearly exclusive folivores and frugivores. Furthermore, species of all home range sizes showed a negative response to fragmentation, while habitat area had an increasingly positive effect as home range increased in size. Overall, the general trends for the majority of lemur species are dire and point to the need for immediate actions on a multitude of fronts, most importantly landscape-level reforestation efforts.     

Home range size of willow tits: a response to winter habitat loss

We examined the behavioral response to habitat loss and fragmentation of willow tits (Parus montanus) in winter in a mosaic forest landscape in northern Finland. We studied habitat preference, flock size and home range size of 16 flocks, half of which had their territories in forests fragmented by forestry and half in continuous forest. We predicted that birds would respond to habitat loss by enlarging their home range and/or diminishing group size. In addition, to compensate for fragmentation effects, willow tits might be expected to include more optimal habitat into their territories. Flocks included on average 3.9 birds and occupied territories of 12.6 ha. Willow tits avoided open areas (clear cuts and young sapling stands) and preferred mature forests and older sapling stands or pine bogs equally. Birds responded to habitat loss by enlarging their home ranges but not by reducing the group size. Large territories included a smaller proportion of mature forests, but the proportion of sapling and pine bog habitat did not change. Birds on territories that included a large proportion of open habitat localized their activity on several distinct habitat patches that were distributed over a wide area. We conclude that willow tits adjust territory use to compensate for the inclusion of unsuitable habitat within home ranges, and older sapling areas and pine bogs serve as surrogates for mature forests. However, birds did not enlarge the proportion of forest habitat in their territories with increasing habitat loss. Thus, our data do not suggest a strong effect of fragmentation, but imply that forestry practices reduce suitable wintering habitat and carrying capacity in the area. Thus winter habitat loss may explain the observed population decline of willow tits in Finland during recent decades.     

Effectiveness of green-tree retention in the conservation of ectomycorrhizal fungi

Habitat fragmentation stresses may reduce the long-term effectiveness of green-tree retention as refugia for ectomycorrhizal fungal (EMF) species. We tested for a minimum retention patch size where EMF species abundance (morphotyping with molecular analysis), richness and reproduction (epigeous sporocarps) aligned with interior Pseudotsuga menziesii habitat on Vancouver Island (Canada). Ten years after logging, species richness was altered along the entire gradient of patch sizes (single trees to 0.12 ha), while % abundance and fruiting had significantly declined for some prevalent EMF species. Retention patches 20 m in diameter, on average, were therefore insufficient in size to ensure the continuity of mature-forest dependent EMF species. Refugia effectiveness would also correspond with habitat extent, and α and γ diversity estimates indicated retention patches approximately 0.2 ha in size, and culminating in at least 3 % of the cutblock area, would capture much of the spatial heterogeneity and species diversity of this EMF community.