Standard Automated Perimetry versus Matrix Frequency Doubling Technology Perimetry in Subjects with Ocular Hypertension and Healthy Control Subjects

Background

To evaluate the relationship and agreement between standard automated perimetry (SAP) and Matrix frequency doubling technology (Matrix-FDT) in subjects with ocular hypertension and healthy control subjects.

Methods

Forty-four eyes of 44 ocular hypertensive subjects and 29 eyes of 29 healthy age-matched control subjects were included in this prospective study. All participants underwent complete ophthalmic examination, including slit-lamp biomicroscopy, intraocular pressure measurement, pachymetry, and dilated fundus examination, and showed reliable visual field tests. One randomly selected eye of each participant was examined with SAP (Swedish Interactive Threshold Algorithm [SITA] Standard 24-2 test) and Matrix-FDT (24-2 threshold test), in random order. Correlations between global indices (MD, PSD), regions (2 hemifields, 4 quadrants, 6 sectors) and 52 single field positions were analyzed using Spearman’s rank correlation coefficient.

Results

In both groups, mean deviation values of SAP and Matrix-FDT correlated significantly (OHT subjects: r = 0.47, p<0.005; healthy subjects: r = 0.68; p<0.001, respectively). Pattern standard deviation of SAP and Matrix-FDT showed no significant correlation in healthy subjects but correlated significantly in ocular hypertensive subjects (r = 0.45, p<0.005). In healthy subjects, a significant correlation between SAP and Matrix-FDT was shown in the supero-temporal and infero-temporal sectors of the disc (r = 0.40 and r = 0.38, p<0.05, respectively). In OHT subjects, supero-temporal, supero-nasal and nasal sectors correlated significantly (r = 0.49, 0.62 and 0.38, p≤0.01, respectively). The correlation pattern of individual visual field test locations appeared heterogeneous in both groups.

Conclusions

In both, ocular hypertensive and healthy subjects SAP and Matrix-FDT correlate well. In ocular hypertensive subjects, both techniques showed good correlation in the supero-temporal, supero-nasal, and nasal sectors of the disc. Poor agreement was found in the temporal, infero-temporal and infero-nasal disc sectors. This missing correlation might be related to early retinal nerve fiber layer damage in these regions of the disc, recognized by one of the visual field instruments.     

Long Intergenic Non-Coding RNAs (LincRNAs) Identified by RNA-Seq in Breast Cancer

In an attempt to find the correlation of aberrant expression of long intergenic noncoding RNAs (lincRNAs) with cancer, twenty-five samples of breast cancer tissue and respective adjacent normal tissue were studied for the expression of lincRNAs by RNA-seq. Among the 538 lincRNAs studied, 124 lincRNAs were exclusively expressed in cancer adjacent tissues and 62 lincRNAs were exclusively expressed in the cancer tissues. Furthermore, the expression of 134 lincRNAs was higher while 272 lower in breast cancer tissue compared with adjacent tissue. The expression of four selected lincRNAs (BC2, BC4, BC5, and BC8) was validated by semi-quantitative and real-time PCR. It was revealed that expression of lincRNA-BC5 was positively correlated with patients'' age, pathological stage, and progesterone receptor concentration, while lincRNA-BC8 was negatively correlated with progesterone receptor expression. Higher expression of lincRNA-BC4 was seen in advanced breast cancer grade. LincRNA-BC2 showed no specific changes in the pathological features studied. Interactions between selected lincRNAs and breast cancer associated proteins were highly suggested by RPIseq based on the specific secondary structure. The results demonstrated that this group of lincRNAs was aberrantly expressed in breast cancer. They might play important roles in the function of oncogenes or tumor suppressors affecting the development and progression of breast cancer.     

Glial Cells Identified by Anti-α-Albumin (Anti-GFA) in Human Pineal Gland

Abstract: α-Albumin, a CNS specific protein, identical to GFA protein and specific for glial cells, has been found in the human pineal gland using histoimmunological and quantitative methods. The significance of its presence in the pineal gland is discussed.     

Dual Somatic Recordings from Gonadotropin-Releasing Hormone (GnRH) Neurons Identified by Green Fluorescent Protein (GFP) in Hypothalamic Slices

Gonadotropin-Releasing Hormone (GnRH) is a small neuropeptide that regulates pituitary release of luteinizing hormone (LH) and follicle-stimulating hormone (FSH). These gonadotropins are essential for the regulation of reproductive function. The GnRH-containing neurons are distributed diffusely throughout the hypothalamus and project to the median eminence where they release GnRH from their axon terminals into the hypophysiotropic portal system (1). In the portal capillaries, GnRH travels to the anterior pituitary gland to stimulate release of gonadotropins into systemic circulation. GnRH release is not continuous but rather occurs in episodic pulses. It is well established that the intermittent manner of GnRH release is essential for reproduction (2, 3).Coordination of activity of multiple GnRH neurons probably underlies GnRH pulses. Total peptide content in GnRH neurons is approximately 1.0 pg/cell (4), of which 30% likely comprises the releasable pool. Levels of GnRH during a pulse (5, 6), suggest multiple GnRH neurons are probably involved in neurosecretion. Likewise, single unit activity extracted from hypothalamic multi-unit recordings during LH release indicates changes in activity of multiple neurons (7). The electrodes with recorded activity during LH pulses are associated with either GnRH somata or fibers (8). Therefore, at least some of this activity arises from GnRH neurons.The mechanisms that result in synchronized firing in hypothalamic GnRH neurons are unknown. Elucidating the mechanisms that coordinate firing in GnRH neurons is a complex problem. First, the GnRH neurons are relatively few in number. In rodents, there are 800-2500 GnRH neurons. It is not clear that all GnRH neurons are involved in episodic GnRH release. Moreover, GnRH neurons are diffusely distributed (1). This has complicated our understanding of coordination of firing and has made many technical approaches intractable. We have optimized loose cell-attached recordings in current-clamp mode for the direct detection of action potentials and developed a recording approach that allows for simultaneous recordings from pairs of GnRH neurons.     

Patterns of infestation by stem-borers (Chloropidae and Opomyzidae) in grassland

The colonisation of a newly sown field of perennial ryegrass (Lolium perenne L.) by stem-boring dipterans was studied. Overall there were significantly more stem-borer larvae close to the edge of the field (within 15 m) than in the middle. Oscinella vastator Curtis and to a lesser extent O. frit L. (aberrant form) mainly colonised the edge of the field while O. frit and Geomyza tripunctata Fallén colonised the whole field more evenly. The results have implications for control strategies of the stem-borer complex.

---

Résumé L'étude porte sur la colonisation d'une prairie nouvellement semée en ray-gras anglais (L. perenne) par des diptères Chloropidae et Opomyzidae. La proportion de talles contenant des larves atteignait 10% en octobre, mais avait diminué à la fin de novembre. Il y avait significativement plus de larves près de la périphérie du champ (jusqu'à 15 m de la bordure) qu'au centre. La densité des larves semble être influencée par la nature des cultures avoisinantes. Oscinella vastator et, dans une moindre mesure, O. frit (forme aberrante) colonisant principalement les bordures du champ, ce qui indique une migration principalement locale. O. frit et Geomyza tripunctata sont répartis d'une façon plus uniforme dans le champ, peut-être parce que ces espèces sont plus migratices. Ces résultats ont une influence dans la mise au point d'un système de protection contre ces espèces.

     

A Centromeric Satellite Sequence in the Pacific Oyster (Crassostrea gigas Thunberg) Identified by Fluorescence In Situ Hybridization

A highly repetitive satellite sequence was previously identified in the Pacific oyster Crassostrea gigas Thunberg. The sequence has 168 bp per unit, present in tandem repeats, and accounts for 1% to 4% of the genome. We studied the chromosomal location of this satellite sequence by fluorescence in situ hybridization (FISH). A probe was made by polymerase chain reaction and incorporation of digoxigenin-11-dUTP. Hybridization was detected with fluorescein-labeled antidigoxigenin antibodies. FISH signals were located at centromeric regions of 7 pairs of the Pacific oyster chromosomes. No interstitial site was found. Signals were strong and consistent on chromosomes 1, 2, 4, and 7, but weak or variable on chromosomes 5, 8, and 10. No signal was observed on chromosomes 3, 6, and 9. Our results showed that this sequence is clearly a centromeric satellite, disputing its previous assignment to the telomeric and submetacentric regions of 2 chromosomes. No signal was detected in the American oyster (Crassostrea virginica Gmelin). Received February 2, 2001; accepted May 24, 2001     

质谱鉴定PC12细胞蛋白酶体抑制剂PSI-诱导性包含体中的LBs蛋白质

路易(小)体(Lewy body, LB）构成特征的蛋白质组份（protein content）在体外形成的路易(小)体样包含体（Lewy body-like inclusion）或聚集体（aggresome）中能够获得鉴定．通过蛋白质组学方法鉴定LB蛋白质组分是一种新的途径.10 µmol/L人工合成蛋白酶体抑制剂PSI（proteasomal inhibitor）作用PC12细胞48 h使其产生PSI诱导性包含体（PSI-induced inclusions）. 为了在体外指明可能的LB蛋白质组分,通过生物化学分级分离、双向电泳（two-dimensional electrophoresis,2-D）和肽质量指纹鉴定（identification via peptide mass fingerprints,PMF）的蛋白质组学方法,鉴定了2个涉及突触递质合成的蛋白质、6个26 S蛋白酶体亚基、2个细胞骨架蛋白、2个线粒体蛋白、1个抗氧化蛋白和7个分子伴侣蛋白和（或）分子伴侣样蛋白等20个LB蛋白质组分.结果提示,当PC12细胞发生蛋白酶体抑制时,这20个LB蛋白质组分可能被富集到PSI诱导性包含体中．     

Associations Between Milk Performance Traits in Holstein Cows and 16 Candidate SNPs Identified by Arrayed Primer Extension (APEX) Microarray

An oligonucleotide microarray—which allows for parallel genotyping of many SNPs in genes involved in cow milk protein biosynthesis—was used to identify which of the 16 candidate SNPs are associated with milk performance traits in Holstein cows. Four hundred cows were genotyped by the developed and validated microarray. Significant associations were found between four single SNPs, namely DGAT1 (acyloCoA:diacylglycerol acyltransferase), LTF (lactoferrin), CSN3 (kappa-casein), and GHR (growth hormone receptor) and with fat and protein yield and percentage. Many significant associations between combined genotypes (two SNPs) and milk performance traits were found. The associations between the combined genotypes DGAT1/LTF and DGAT1/LEPTIN analyzed traits are presented as examples.

The microarray based on APEX (Arrayed Primer Extension) is a fast and reliable method for multiple SNP analysis of potential application in marker-assisted selection. After further development, the chip may prospectively be used for dairy cattle paternity analysis and evolutionary studies.     

巨尾阿丽蝇在自由状态下的电击回避学习能力(英文)

蜜蜂和果蝇具有良好的学习记忆能力。利用自主改良的研究装置对另一种具有强大生存本能的双翅目昆虫——巨尾阿丽蝇(Aldrichina grahami)在自由状态下电击回避学习能力进行研究。结果表明,巨尾阿丽蝇具有良好的学习记忆能力,因为当刺激电压范围为5V到45V时,观察到巨尾阿丽蝇有显著的回避电刺激行为,而当电压达到60V时会受到明显伤害。由此推测,巨尾阿丽蝇适合作为神经系统研究的动物模型。本实验所采用的实验范例较以往有所改进,适合作为自由状态下研究昆虫的工具。     

半闭弯尾姬蜂寄主搜索中的学习行为

研究了半闭弯尾姬蜂寄主搜索过程中的学习行为。结果表明,成虫期之前的饲养寄主所取食的寄主植物对成蜂行为没有影响,而雌蜂早期的短暂经历可对其随后的行为反应产生显著影响,从而对已经历的植物气味表现出显著的嗜好,但这种通过学习所表现出的嗜好又可因新的经历而改变。雌成蜂不仅能对其所经历的虫伤寄主植物释放的信息化合物进行学习,而且对其所经历的寄主幼虫的信息化合物也能进行学习。     

Diurnal Patterns in Host Finding by Potato Aphids, Macrosiphum euphorbiae (Homoptera: Aphididae)

Potato aphid, Macrosiphum euphorbiae (Homoptera: Aphididae), is an abundant potato pest and vector of potato leaf-roll virus and potato virus Y in Maine and other potato growing areas. We investigated the circadian rhythmicity of its movement towards host plant odor. Effects of daily cycle (day or night) and illumination (light or dark) on the proportion of aphids colonizing potato leaflets were determined in a Petri plate arena and in a Y-tube olfactometer. In Petri dishes, both daily cycle and light had a highly significant effect on plant colonization. Increasing temperature reduced aphid colonization of the leaflets. In the olfactometer, light had a significant effect on the proportion of aphids walking towards the host plant. Interaction between time and light was also statistically significant, with the effect of illumination being smaller during the day than during the night. Our results suggest that circadian rhythm in host-finding behavior of the potato aphid is regulated by both exogenous and endogenous mechanisms.     

Genetic Patterns in European Geometrid Moths Revealed by the Barcode Index Number (BIN) System

Background

The geometrid moths of Europe are one of the best investigated insect groups in traditional taxonomy making them an ideal model group to test the accuracy of the Barcode Index Number (BIN) system of BOLD (Barcode of Life Datasystems), a method that supports automated, rapid species delineation and identification.

Methodology/Principal Findings

This study provides a DNA barcode library for 219 of the 249 European geometrid moth species (88%) in five selected subfamilies. The data set includes COI sequences for 2130 specimens. Most species (93%) were found to possess diagnostic barcode sequences at the European level while only three species pairs (3%) were genetically indistinguishable in areas of sympatry. As a consequence, 97% of the European species we examined were unequivocally discriminated by barcodes within their natural areas of distribution. We found a 1:1 correspondence between BINs and traditionally recognized species for 67% of these species. Another 17% of the species (15 pairs, three triads) shared BINs, while specimens from the remaining species (18%) were divided among two or more BINs. Five of these species are mixtures, both sharing and splitting BINs. For 82% of the species with two or more BINs, the genetic splits involved allopatric populations, many of which have previously been hypothesized to represent distinct species or subspecies.

Conclusions/Significance

This study confirms the effectiveness of DNA barcoding as a tool for species identification and illustrates the potential of the BIN system to characterize formal genetic units independently of an existing classification. This suggests the system can be used to efficiently assess the biodiversity of large, poorly known assemblages of organisms. For the moths examined in this study, cases of discordance between traditionally recognized species and BINs arose from several causes including overlooked species, synonymy, and cases where DNA barcodes revealed regional variation of uncertain taxonomic significance.     

Patterns of oviposition by Sandia xami (Lepidoptera, Lycaenidae) in relation to food plant apparency

ABSTRACT.

• 1 The butterfly Sandia xami (Reakirt) has a very clumped yearly pattern of oviposition on its food plant Echeveria gibbiflora D.C., and the mean number of eggs per plant is always very low.
• 2 Three features of host plants are highly associated with the probability of being oviposited upon: height of plant; degree of conspicuousness; and degree of isolation from conspecific plants.
• 3 The relative importance of these factors as predictors of the probability of oviposition change according to the time scale considered: height and conspicuousness are more important over short (weekly) time intervals whilst isolation takes precedence over longer (yearly) periods.
• 4 It is hypothesized that the clumped pattern of oviposition is responsible for the low numbers of the butterflies relative to their very abundant food plant.

     

茶树叶片类脱水素蛋白的Western-blot分析

为了解茶树脱水素种类与功能,采用Western-blot技术,研究了不同季节及越冬过程中茶树叶片脱水素蛋白家族的表达模式。结果显示:(1)茶树叶片总蛋白提取采用酚-甲醇/醋酸铵沉淀法,用时短、蛋白浓度高、SDSPAGE电泳条带清晰,背景干净,满足茶树Western-blot技术要求。(2)在不同季节及越冬期中发现14~95kD共9种不同分子量的茶树类脱水素蛋白,其中95、65、48、37、34和14kD等6种蛋白表达量较为稳定,季节与越冬期变化不明显;58kD脱水素仅在冬季表达,越冬期不断上升,2月份增加到最高,表达丰度高;28kD脱水素蛋白在冬季表达量高,越冬期与茶树抗寒力变化规律一致;21kD脱水素在夏季和越冬期后期有较高的表达。研究表明,这3种脱水素可能在茶树抗逆中起着重要作用。     

Patterns of gall-forming in Ossaea confertiflora (Melastomataceae) by Lopesia brasiliensis (Diptera: Cecidomyiidae) in an area of Atlantic Rainforest in southeastern Brazil

Patterns of galling by the gall midge Lopesia brasiliensis (Diptera: Cecidomyiidae) were studied in Ossaea confertiflora (Melastomataceae) in an Atlantic forest site at Ilha Grande, RJ. Out of the 81 plants surveyed, 55 (67.9%) bore galls. The number of galls per galled individual ranged from 1 to 261 and 94.4% of the galls were in leaves. The number of galls per galled leaf varied from 1 to 25. Total gall number was positively correlated with plant height. Larger and more ramified plants tended to have a smaller percentage of their leaves with galls and a lower density of galls per leaf than smaller plants. Plants that were close to other individuals of the same species tended to have more galls per leaf than relatively isolated plants. The observed patterns may be linked to strategies of optimization in the use of resources (i.e. oviposition sites) and predation avoidance by the gall midges.